Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002568

Physical Location & Seq

Genomic Coordinates Reverse (-)

81735815 .. 81739931

Gene Structure 4117 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G054010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGGCAAAGACGAAGAGGAACAGGAACGCTGGAGGGGGAGGGTATTGCGGTGGTGTTTTTGAGCCGGCGGGTGGATATGAGTGCTCGGGTAGCTCAGGAAGAATCGACACAGAAGTAACAGTCTCAGAGGGGTCGAGTGCTCCGAAAAGGAAGTGTATTAGTTTGAATTCTAATAATCGCGACAGTTTCAGAGTGCCCACGCAAGTTCTCCCCTTGTCAAGGATGTTGTCGTCAGAAAGGAAGGATTTGAGGAACAGGTTGAGGACGGAGCTTGAACAGATTCAGGTACTTAAGAAGAGAGTTGAAACACATAGAAGCAATGGTGTTGCAGTGTCGTCTTCTAGTGATATCCTCAGCTGTAGCAATGGACCAAATGGGCTGCATGTGGAAAATTTGCAAAAGTTGTCAGCATTGTCTTCTGGACAGAGGAAAAAATTGTATCCTGTGGCTAAGAAAGTGCATGAGTTGAATCCCGGCAATTCTGGTAGGTTCAAGTCGGTTGGTCAGGCTTCAAAACCTAGCACTGCAAGTGTAATGTTGATGAACCAATGTGAGAAGGTATTGCGACGGGTAATGACCCAAAAATTTGCACATCCATTTAATAAACCTGTTGATATAGTGGAGTTAAAGATTCCAGATTACTTTACTATTATCAAGTATCCAATGGATTTGGGTACAATAAAGAAAAAGCTAACTTCAGGATCTTATTCAAGCCCATTGGAGTTTGCTGCTGATGTCAGGCTTACTTTTACCAATGCTATGACCTACAATCCACCAGACAATAATGTACATATATGGGCTGATGATCTTAGTAAATATTTTGAACTCTGGTGGAAACCCATTGAGAAGAAACTTCCAAAGGCGGATCCACCAGCTAAATCTGCTCCTCATGAAGACATGGAAATTGCCAAGCCAATCCTCCCCTCAAGAAAGAGGACAATCACTTCAATGCAAAATGAAGTAAAGTCTGAGCCTGCTAAGCGGGTAATGGCAATGGAGGAGAAGCACACTCTGACAAGAGATTTGGGGTCTTTGCCACCAGAAGAAATTCCTTCAAACATCATTGATTTCTTGAGGGAACATAGTTCAAATGGAAAGGAGAATCCAGAAGATGAGATTATGATTGACATCTATGCCCTCAGTGATGATACCTTGTTTACACTTCGGAAACTCTTAGATGAGTATGCACAAGAGAAAGAAAAGATTCATGTGAGGGCAGAGCCTTGTTCAATGGAGCTTTTGAATGATTCAGGGTTGAGCAATTCATCCATGCAGCCATGTGAAGGGAATGACCTTGCTGACGCTGAGGAGGATGTTGATATTGGTGGAAATGAGCCCCCTGTCACAAGCTATCCTCCTGTTGAGATAGAAAAGGATACAGGCCATAGAAGCAGTAAAAACATAAGCCCAAGCAGCTCCAATGAGTCAGATTCAAGCAGTTCCGAGAGTGACAGTGATGATGATTCTAAGGTCTCAAGTCCAGTAAGTACTCAACCCTTCAGTTCTGAAACTCAAGCAGATGAAAAGACAACAGTTGGAAATCCCCTTGAAGGAACTCAGTCTGACAGTGGGTTGGATCAAGTTGATCAAACTTCCCAGCCAAAGCCAAGTTCAGTTGAATCAGATAGCCGTCAGGATGGGGACAGTGCTCCCACAGAGAGGCCAGTCTCCCCTGATAAGCAGCATAGAGCCGCTCTGTTGAAGCATCGTTTTGCTGATACCATTTTAAGAGCTCAAGAGAAAACCTTTATTCAGGGTGACAAAGGGGATCCTGAGAAATTGCGACGGCAGAGGGAGGAACTTGAACTGCAACAGAAGAAAGAAAAGGCCCGGTTGCAAGCAGAAGCCAAAGCTGCTGAGGAGGCTAGAAGAAAAAAAGAAGCAGAAGCTGTAGCCGAGGCTAAACGGAAGAGGGAGCTTGAGAGAGAAGCAGCAAGACAGGCTTTGCTGCAGATGGAGAAGACTGTTGAAATCAATGACTCTCGGTTCCTTCAAGATCTGGAAATGCAAATGCTTACAGCTCCCATGGAGCAGTTACCAGTTTCGGTAGATGAAACAAGCCCAGATCATTCAGAGGATGGTTTAGGAGGTTTCAACTTCCGGGGCAGTAACCCCTTGGAACAACTTGGCTTGTACATGAAAAGGGATCAGGATGATGAGGAAGAAGAAGGTGATCTTGTCGTTCCAAATCCTGTAGATGATATAGAGGAGGGAGAAATTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0008150 GO:0009507 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

741

Amino Acids

82.43

Weight (kDa)

5.17

Isoelectric Point (pI)

56.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	184 - 265	1.1e-21	Bromodomain
BET	PF17035	330 - 393	5.6e-12	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01770 AT3G01770 AT3G27260 AT3G27260 AT3G27260 AT3G27260 AT5G14270 AT5G14270 AT5G14270
fragaria_vesca	FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920
malus_domestica	MD09G1016100.v1.1 MD17G1016600.v1.1
prunus_persica	Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1
pyrus_communis	pycom111g01310 pycom17g01330
rosa_chinensis	RchiOBHm_Chr2g0174631
rosa_laevigata	RLG00000022278
rosa_multiflora	Rmu_sc0003649.1_g000001
rosa_roxburghii	Rroxscaffold_2G00077990
rosa_rugosa	Rorug02G0578200 Rorug02G0578300 Rorug02G0578400 Rorug02G0578500
rosa_samantha	Rh2AG659500 Rh2BG670300 Rh2CG633600 Rh2DG684000
rosa_wichuraiana	Rw2G054010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1694
AccII	CGCG	1 cut(s)	180
AciI	CCGC	5 cut(s)	48, 68, 863, 982, 1692
AclWI	GGATC	7 cut(s)	709, 860, 873, 1584, 1763, 1776, 2154
AcsI	RAATTY	4 cut(s)	166, 391, 584, 1047
AcuI	CTGAAG	2 cut(s)	681, 1483
AfaI	GTAC	5 cut(s)	288, 676, 789, 1489, 2135
AfiI	CCNNNNNNNGG	5 cut(s)	71, 219, 1283, 1550, 1659
AflII	CTTAAG	1 cut(s)	290
AjuI	GAANNNNNNNTTGG	2 cut(s)	1594, 1626
Alw21I	GWGCWC	4 cut(s)	86, 142, 1651, 1735
Alw26I	GTCTC	3 cut(s)	127, 1477, 1672
AlwI	GGATC	7 cut(s)	709, 860, 873, 1584, 1763, 1776, 2154
AlwNI	CAGNNNCTG	1 cut(s)	1889
Ama87I	CYCGRG	1 cut(s)	85
AoxI	GGCC	3 cut(s)	1381, 1661, 1827
ApeKI	GCWGC	8 cut(s)	379, 728, 1273, 1413, 1681, 1853, 1931, 1948
ApoI	RAATTY	4 cut(s)	166, 391, 584, 1047
ArsI	GACNNNNNNTTYG	2 cut(s)	1006, 1038
Asp700I	GAANNNNTTC	3 cut(s)	279, 1047, 1203
AspS9I	GGNCC	2 cut(s)	368, 1828
AsuC2I	CCSGG	3 cut(s)	474, 1831, 2102
AsuHPI	GGTGA	2 cut(s)	1769, 2183
AvaI	CYCGRG	1 cut(s)	85
AvaII	GGWCC	1 cut(s)	368
BaeGI	GKGCMC	1 cut(s)	198
BamHI	GGATCC	2 cut(s)	865, 1768
BanII	GRGCYC	2 cut(s)	1338, 1735
BbsI	GAAGAC	4 cut(s)	330, 408, 900, 1967
Bbv12I	GWGCWC	4 cut(s)	86, 142, 1651, 1735
BbvCI	CCTCAGC	3 cut(s)	353, 1305, 1857
BbvI	GCAGC	8 cut(s)	366, 715, 1285, 1425, 1693, 1840, 1935, 1943
BccI	CCATC	3 cut(s)	1631, 1948, 2072
BceAI	ACGGC	2 cut(s)	1614, 1802
BciVI	GTATCC	3 cut(s)	450, 669, 1369
BclI	TGATCA	1 cut(s)	1585
BcnI	CCSGG	3 cut(s)	474, 1831, 2102
BcoDI	GTCTC	3 cut(s)	127, 1477, 1672
BfaI	CTAG	3 cut(s)	342, 519, 1866
BfmI	CTRYAG	4 cut(s)	358, 1890, 1949, 2193
BfrI	CTTAAG	1 cut(s)	290
BfuI	GTATCC	3 cut(s)	450, 669, 1369
BglII	AGATCT	1 cut(s)	1996
BisI	GCNGC	9 cut(s)	380, 729, 1274, 1414, 1682, 1692, 1854, 1932, 1949
BlpI	GCTNAGC	1 cut(s)	978
BlsI	GCNGC	9 cut(s)	381, 730, 1275, 1415, 1683, 1693, 1855, 1933, 1950
BmcAI	AGTACT	1 cut(s)	1489
Bme1390I	CCNGG	3 cut(s)	474, 1831, 2102
Bme18I	GGWCC	1 cut(s)	368
BmeT110I	CYCGRG	1 cut(s)	85
BmgT120I	GGNCC	2 cut(s)	368, 1828
BmiI	GGNNCC	3 cut(s)	867, 1770, 1988
BmrFI	CCNGG	3 cut(s)	474, 1831, 2102
BmsI	GCATC	1 cut(s)	1714
BpiI	GAAGAC	4 cut(s)	330, 408, 900, 1967
BpmI	CTGGAG	1 cut(s)	51
Bpu10I	CCTNAGC	4 cut(s)	94, 353, 1305, 1857
Bpu1102I	GCTNAGC	1 cut(s)	978
BpuEI	CTTGAG	6 cut(s)	910, 1093, 1459, 1497, 1719, 1940
BpuMI	CCSGG	3 cut(s)	474, 1831, 2102
BsaBI	GATNNNNATC	1 cut(s)	1127
BsaI	GGTCTC	1 cut(s)	1477
BsaJI	CCNNGG	4 cut(s)	1896, 2025, 2101, 2115
Bsc4I	CCNNNNNNNGG	5 cut(s)	71, 219, 1283, 1550, 1659
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	3 cut(s)	1481, 1664, 2039
Bse3DI	GCAATG	3 cut(s)	325, 370, 999
Bse8I	GATNNNNATC	1 cut(s)	1127
BseDI	CCNNGG	4 cut(s)	1896, 2025, 2101, 2115
BseGI	GGATG	7 cut(s)	228, 592, 1265, 1318, 1642, 2083, 2158
BseJI	GATNNNNATC	1 cut(s)	1127
BseLI	CCNNNNNNNGG	5 cut(s)	71, 219, 1283, 1550, 1659
BseMI	GCAATG	3 cut(s)	325, 370, 999
BseMII	CTCAG	9 cut(s)	108, 138, 367, 960, 1153, 1296, 1571, 1764, 1848
BseNI	ACTGG	3 cut(s)	1481, 1664, 2039
BseRI	GAGGAG	5 cut(s)	876, 1013, 1322, 1874, 2222
BseSI	GKGCMC	1 cut(s)	198
BseXI	GCAGC	8 cut(s)	366, 715, 1285, 1425, 1693, 1840, 1935, 1943
BseYI	CCCAGC	1 cut(s)	1596
Bsh1236I	CGCG	1 cut(s)	180
BshFI	GGCC	3 cut(s)	1383, 1663, 1829
BsiHKAI	GWGCWC	4 cut(s)	86, 142, 1651, 1735
BsiHKCI	CYCGRG	1 cut(s)	85
BsiSI	CCGG	4 cut(s)	65, 474, 1831, 2101
BslFI	GGGAC	1 cut(s)	1655
BslI	CCNNNNNNNGG	5 cut(s)	71, 219, 1283, 1550, 1659
BsmAI	GTCTC	3 cut(s)	127, 1477, 1672
BsmFI	GGGAC	1 cut(s)	1655
BsnI	GGCC	3 cut(s)	1383, 1663, 1829
Bso31I	GGTCTC	1 cut(s)	1477
BsoBI	CYCGRG	1 cut(s)	85
Bsp1286I	GDGCHC	6 cut(s)	86, 142, 198, 1338, 1651, 1735
Bsp1407I	TGTACA	2 cut(s)	787, 2133
Bsp1720I	GCTNAGC	1 cut(s)	978
Bsp19I	CCATGG	1 cut(s)	2025
Bsp68I	TCGCGA	1 cut(s)	180
BspACI	CCGC	5 cut(s)	48, 68, 863, 982, 1692
BspANI	GGCC	3 cut(s)	1383, 1663, 1829
BspCNI	CTCAG	9 cut(s)	107, 137, 366, 961, 1152, 1297, 1570, 1765, 1849
BspFNI	CGCG	1 cut(s)	180
BspHI	TCATGA	1 cut(s)	889
BspLI	GGNNCC	3 cut(s)	867, 1770, 1988
BspMAI	CTGCAG	1 cut(s)	1953
BspPI	GGATC	7 cut(s)	709, 860, 873, 1584, 1763, 1776, 2154
BspTI	CTTAAG	1 cut(s)	290
BspTNI	GGTCTC	1 cut(s)	1477
BsrBI	CCGCTC	1 cut(s)	1694
BsrDI	GCAATG	3 cut(s)	325, 370, 999
BsrFI	RCCGGY	1 cut(s)	64
BsrGI	TGTACA	2 cut(s)	787, 2133
BsrI	ACTGG	3 cut(s)	1481, 1664, 2039
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	4 cut(s)	1896, 2025, 2101, 2115
BssT1I	CCWWGG	2 cut(s)	2025, 2115
Bst4CI	ACNGT	7 cut(s)	121, 185, 1454, 1534, 1568, 1646, 1966
Bst6I	CTCTTC	3 cut(s)	8, 290, 1904
BstAFI	CTTAAG	1 cut(s)	290
BstAUI	TGTACA	2 cut(s)	787, 2133
BstC8I	GCNNGC	3 cut(s)	66, 975, 1839
BstDSI	CCRYGG	1 cut(s)	2025
BstENI	CCTNNNNNAGG	1 cut(s)	217
BstF5I	GGATG	7 cut(s)	228, 592, 1265, 1318, 1642, 2083, 2158
BstFNI	CGCG	1 cut(s)	180
BstMAI	GTCTC	3 cut(s)	127, 1477, 1672
BstMWI	GCNNNNNNNGC	8 cut(s)	90, 881, 979, 1389, 1413, 1853, 1862, 1940
BstNSI	RCATGY	1 cut(s)	386
BstSCI	CCNGG	3 cut(s)	472, 1829, 2100
BstSFI	CTRYAG	4 cut(s)	358, 1890, 1949, 2193
BstSLI	GKGCMC	1 cut(s)	198
BstUI	CGCG	1 cut(s)	180
BstV1I	GCAGC	8 cut(s)	366, 715, 1285, 1425, 1693, 1840, 1935, 1943
BstV2I	GAAGAC	4 cut(s)	330, 408, 900, 1967
BstX2I	RGATCY	4 cut(s)	701, 865, 1768, 1996
BstYI	RGATCY	4 cut(s)	701, 865, 1768, 1996
BsuI	GTATCC	3 cut(s)	450, 669, 1369
BsuRI	GGCC	3 cut(s)	1383, 1663, 1829
BtgI	CCRYGG	1 cut(s)	2025
BtsCI	GGATG	7 cut(s)	228, 592, 1265, 1318, 1642, 2083, 2158
BtsI	GCAGTG	2 cut(s)	336, 522
BtsIMutI	CAGTG	6 cut(s)	336, 522, 1147, 1459, 1573, 1651
BtuMI	TCGCGA	1 cut(s)	180
Cac8I	GCNNGC	3 cut(s)	66, 975, 1839
CaiI	CAGNNNCTG	1 cut(s)	1889
CciI	TCATGA	1 cut(s)	889
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	2 cut(s)	368, 1828
CseI	GACGC	1 cut(s)	1310
Csp6I	GTAC	5 cut(s)	287, 675, 788, 1488, 2134
CviAII	CATG	9 cut(s)	383, 461, 890, 898, 1208, 1270, 1278, 2026, 2137
CviQI	GTAC	5 cut(s)	287, 675, 788, 1488, 2134
Eam1104I	CTCTTC	3 cut(s)	8, 290, 1904
EarI	CTCTTC	3 cut(s)	8, 290, 1904
EciI	GGCGGA	1 cut(s)	878
Ecl136II	GAGCTC	1 cut(s)	1733
Eco130I	CCWWGG	2 cut(s)	2025, 2115
Eco24I	GRGCYC	2 cut(s)	1338, 1735
Eco31I	GGTCTC	1 cut(s)	1477
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	1 cut(s)	368
Eco53kI	GAGCTC	1 cut(s)	1733
Eco57I	CTGAAG	2 cut(s)	681, 1483
Eco88I	CYCGRG	1 cut(s)	85
EcoICRI	GAGCTC	1 cut(s)	1733
EcoNI	CCTNNNNNAGG	1 cut(s)	217
EcoRI	GAATTC	1 cut(s)	166
EcoRV	GATATC	1 cut(s)	349
EcoT14I	CCWWGG	2 cut(s)	2025, 2115
EcoT38I	GRGCYC	2 cut(s)	1338, 1735
ErhI	CCWWGG	2 cut(s)	2025, 2115
FaeI	CATG	9 cut(s)	386, 464, 893, 901, 1211, 1273, 1281, 2029, 2140
FalI	AAGNNNNNCTT	4 cut(s)	1927, 1959, 2160, 2192
FaqI	GGGAC	1 cut(s)	1655
FatI	CATG	9 cut(s)	382, 460, 889, 897, 1207, 1269, 1277, 2025, 2136
FauI	CCCGC	2 cut(s)	61, 975
FbaI	TGATCA	1 cut(s)	1585
Fnu4HI	GCNGC	9 cut(s)	380, 729, 1274, 1414, 1682, 1692, 1854, 1932, 1949
FokI	GGATG	7 cut(s)	235, 579, 1252, 1325, 1649, 2090, 2165
FriOI	GRGCYC	2 cut(s)	1338, 1735
Fsp4HI	GCNGC	9 cut(s)	380, 729, 1274, 1414, 1682, 1692, 1854, 1932, 1949
FspBI	CTAG	3 cut(s)	342, 519, 1866
GluI	GCNGC	9 cut(s)	380, 729, 1274, 1414, 1682, 1692, 1854, 1932, 1949
GsaI	CCCAGC	1 cut(s)	1600
GsuI	CTGGAG	1 cut(s)	51
HaeIII	GGCC	3 cut(s)	1383, 1663, 1829
HapII	CCGG	4 cut(s)	65, 474, 1831, 2101
HgaI	GACGC	1 cut(s)	1310
Hin1II	CATG	9 cut(s)	386, 464, 893, 901, 1211, 1273, 1281, 2029, 2140
HpaII	CCGG	4 cut(s)	65, 474, 1831, 2101
HphI	GGTGA	2 cut(s)	1769, 2183
Hpy166II	GTNNAC	1 cut(s)	1158
Hpy8I	GTNNAC	1 cut(s)	1158
Hpy99I	CGWCG	2 cut(s)	570, 1788
HpyAV	CCTTC	8 cut(s)	235, 550, 1062, 1277, 1507, 1544, 2000, 2162
HpyCH4III	ACNGT	7 cut(s)	121, 185, 1454, 1534, 1568, 1646, 1966
HpyF10VI	GCNNNNNNNGC	8 cut(s)	90, 881, 979, 1389, 1413, 1853, 1862, 1940
Hsp92II	CATG	9 cut(s)	386, 464, 893, 901, 1211, 1273, 1281, 2029, 2140
KroI	GCCGGC	1 cut(s)	64
KroNI	GCCGGC	1 cut(s)	66
Ksp22I	TGATCA	1 cut(s)	1585
LmnI	GCTCC	9 cut(s)	145, 268, 889, 1234, 1421, 1654, 1915, 2026, 2029
Lsp1109I	GCAGC	8 cut(s)	366, 715, 1285, 1425, 1693, 1840, 1935, 1943
LweI	GCATC	1 cut(s)	1714
MaeI	CTAG	3 cut(s)	342, 519, 1866
MaeIII	GTNAC	6 cut(s)	115, 1342, 1448, 1757, 2034, 2108
MbiI	CCGCTC	1 cut(s)	1694
MflI	RGATCY	4 cut(s)	701, 865, 1768, 1996
MhlI	GDGCHC	6 cut(s)	86, 142, 198, 1338, 1651, 1735
MlyI	GAGTC	2 cut(s)	1433, 1973
MmeI	TCCRAC	2 cut(s)	1516, 1554
MroNI	GCCGGC	1 cut(s)	64
MroXI	GAANNNNTTC	3 cut(s)	279, 1047, 1203
MseI	TTAA	5 cut(s)	291, 600, 626, 1727, 2224
MslI	CAYNNNNRTG	1 cut(s)	947
MspA1I	CMGCKG	1 cut(s)	357
MspCI	CTTAAG	1 cut(s)	290
MspI	CCGG	4 cut(s)	65, 474, 1831, 2101
MspR9I	CCNGG	3 cut(s)	474, 1831, 2102
MvnI	CGCG	1 cut(s)	180
MwoI	GCNNNNNNNGC	8 cut(s)	90, 881, 979, 1389, 1413, 1853, 1862, 1940
NaeI	GCCGGC	1 cut(s)	66
NciI	CCSGG	3 cut(s)	474, 1831, 2102
NcoI	CCATGG	1 cut(s)	2025
NgoMIV	GCCGGC	1 cut(s)	64
NlaIII	CATG	9 cut(s)	386, 464, 893, 901, 1211, 1273, 1281, 2029, 2140
NlaIV	GGNNCC	3 cut(s)	867, 1770, 1988
NmeAIII	GCCGAG	1 cut(s)	1921
NmuCI	GTSAC	3 cut(s)	1342, 1448, 1757
NruI	TCGCGA	1 cut(s)	180
NspI	RCATGY	1 cut(s)	386
PagI	TCATGA	1 cut(s)	889
PcsI	WCGNNNNNNNCGW	1 cut(s)	140
PdiI	GCCGGC	1 cut(s)	66
PdmI	GAANNNNTTC	3 cut(s)	279, 1047, 1203
PkrI	GCNGC	9 cut(s)	381, 730, 1275, 1415, 1683, 1693, 1855, 1933, 1950
PleI	GAGTC	2 cut(s)	1432, 1973
PpsI	GAGTC	2 cut(s)	1432, 1973
Psp124BI	GAGCTC	1 cut(s)	1735
PspFI	CCCAGC	1 cut(s)	1596
PspN4I	GGNNCC	3 cut(s)	867, 1770, 1988
PspPI	GGNCC	2 cut(s)	368, 1828
PstI	CTGCAG	1 cut(s)	1953
PstNI	CAGNNNCTG	1 cut(s)	1889
PsuI	RGATCY	4 cut(s)	701, 865, 1768, 1996
PvuII	CAGCTG	1 cut(s)	357
RruI	TCGCGA	1 cut(s)	180
RsaI	GTAC	5 cut(s)	288, 676, 789, 1489, 2135
RsaNI	GTAC	5 cut(s)	287, 675, 788, 1488, 2134
RseI	CAYNNNNRTG	1 cut(s)	947
SacI	GAGCTC	1 cut(s)	1735
SaqAI	TTAA	5 cut(s)	291, 600, 626, 1727, 2224
SatI	GCNGC	9 cut(s)	380, 729, 1274, 1414, 1682, 1692, 1854, 1932, 1949
Sau96I	GGNCC	2 cut(s)	368, 1828
ScaI	AGTACT	1 cut(s)	1489
SchI	GAGTC	2 cut(s)	1433, 1973
ScrFI	CCNGG	3 cut(s)	474, 1831, 2102
SduI	GDGCHC	6 cut(s)	86, 142, 198, 1338, 1651, 1735
SfaNI	GCATC	1 cut(s)	1714
SfcI	CTRYAG	4 cut(s)	358, 1890, 1949, 2193
SinI	GGWCC	1 cut(s)	368
SmiMI	CAYNNNNRTG	1 cut(s)	947
SmlI	CTYRAG	7 cut(s)	290, 925, 1072, 1474, 1512, 1734, 1919
SmoI	CTYRAG	7 cut(s)	290, 925, 1072, 1474, 1512, 1734, 1919
SsiI	CCGC	5 cut(s)	48, 68, 863, 982, 1692
SspI	AATATT	1 cut(s)	818
SspMI	CTAG	3 cut(s)	342, 519, 1866
SstI	GAGCTC	1 cut(s)	1735
StyD4I	CCNGG	3 cut(s)	472, 1829, 2100
StyI	CCWWGG	2 cut(s)	2025, 2115
TaaI	ACNGT	7 cut(s)	121, 185, 1454, 1534, 1568, 1646, 1966
TaqI	TCGA	2 cut(s)	105, 134
TatI	WGTACW	3 cut(s)	787, 1487, 2133
TauI	GCSGC	1 cut(s)	1694
Tru1I	TTAA	5 cut(s)	291, 600, 626, 1727, 2224
Tru9I	TTAA	5 cut(s)	291, 600, 626, 1727, 2224
TscAI	CASTG	6 cut(s)	336, 529, 1147, 1459, 1573, 1651
TseFI	GTSAC	3 cut(s)	1342, 1448, 1757
TseI	GCWGC	8 cut(s)	379, 728, 1273, 1413, 1681, 1853, 1931, 1948
Tsp45I	GTSAC	3 cut(s)	1342, 1448, 1757
TspDTI	ATGAA	8 cut(s)	557, 906, 972, 1196, 1254, 1536, 2067, 2153
TspGWI	ACGGA	2 cut(s)	281, 1921
TspRI	CASTG	6 cut(s)	336, 529, 1147, 1459, 1573, 1651
Vha464I	CTTAAG	1 cut(s)	290
VpaK11BI	GGWCC	1 cut(s)	368
XagI	CCTNNNNNAGG	1 cut(s)	217
XapI	RAATTY	4 cut(s)	166, 391, 584, 1047
XceI	RCATGY	1 cut(s)	386
XmnI	GAANNNNTTC	3 cut(s)	279, 1047, 1203
XspI	CTAG	3 cut(s)	342, 519, 1866
ZrmI	AGTACT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.