FvH4_7g01170

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0010078
Physical Location & Seq
Reverse (-)
1575657 .. 1580419
4763 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g01170.t2

Sequence Viewer

Length: 2373 bp
ATGGAAACACAAAACGACGACGTCTCTTCATGGAGCTCCGATACTAATTGGTCCGTCGCCGGTGGCGCTCTCGTAGATCGCGTCACCTTCGAGTCCTCCTTGTCTCCGATCGACGGCGACGCTCCAAATTCCACGGCCGGATCCTCCCTTATTCTTCGCCCTCCGTCACCAGATTCTGGACCTTGCGAGATCACCATTAATTTCACACAAAAGCATGAGGTCCAGCAGATTTATGTTCGGAGTACTGCCCGAGTCTATGAGGTATACTATGCACCTGATTCACAAAGTGACAACGAATATCTATGTACTGTTCGCTGTGGAATTGCTGCCAGAGATGAAGAAGTGCTTCACACAGCTAATAATGAAGAAGTTCATTCTGCAAATTCAAATGGGTCTCTTAAGGAGGTATCTGAAGAAAACCTAAGAAATGGCAATAACTTGAGTACCAGTGAAGATGACTGGGTTGAAGTGAAAGTCCCAGATGGTCATGTGCTTGATAAAAAAATCAGCTCCTTGCCATTGAATTCTGGTTCTGAACAGGCTTTTTATGAAGCCACAGCACAGATGAGTGATGTAAATCCTTGTATATCCTTAACACTTCGTCTACTGTCACTTGAGAGGAAAGATTGTGTTTATGTTGATGAGATTTATGTGTTTGCTGATCCTGATGATTCAGCGGATTTGGAAAAGGAAACGAGTACAGTGGAAAACTCAGCTGGAAGTTCTCTCATGGCCATGTTTATGCCTACCCTCTTGCAGTTATCTAAAACAAGGAGTGTTAACCAAACCCAAGACTCCCAAATGATTAGGTCAAAAGCCTCTGATTCTACCAGTGTTGCGACTAAGTTCCAGACAGATATTAAACCCAGCATATCCGAGCATCAAGAAGTATTGTGTCAGGATGCGAGTAGGGATACATTTGGTAGCACCCCATCACAGATCCCTGTAGGGGTTCCTGTTACAGAAAGTGAAACTGATACTGGAAATCACCATGTTGAAAGATCTATGGACCTGCTTTTTTCTCGAATGGGCAGAATAGAGGATCTATTATTGAGATTTGAAGACAAAATGGTAAAGCCCATAAGCAGCATTGAGGCAAGGCTTGAGAGGGTTGAGCAGCAACTTGAAGTACTCAGCAAACAATCACAGAATTCTAGATTGTCAACGTGCTCAAGATTCTATGCTCCTTCTTTCTCATGCATTGAGTCTGATTCCAACTCCTTCTGCAACAGTGGAAATGACTATCCCAGTTGTGAGGCAGTAATATCAGGTCTAGTAGTAACTGCTCCTGAATTTTCAAGTGATGATGAGGATGAAGAAGATCAATCATCAAGTCTAGTGATAACTCCTTCAAAGAATACACCAAGGCCTGCTTTGACAATTGATGATGCCCTAGCATCTGCACTAGCTGGGTTCTTGTCTCTGACTTCTAATCACGCTCCGAAGTGTAGTCAACCTTTTTCCGTTAAAGCTCCAGAATTTTTAAATGAAGAAGATGGTAGCCCTGACACAAAAGCTTCAGTGGGAGTTGAAGAACTAGGGACAGGGCCATCCATGTGCTATGATGAATCTGATGGGATACAGAATGTGAAAGATTCACGAGCTCATTCATCCAGAATTTCTTCATATACTGAGGAGAATGATGAAAGATTTAATGATGAGCACCCTGTTAAACCAGAGGGAATTAGTGTGCAGCAAGAGCATCATGAGGTCACAGGAGAAGACAAACCAGATGGTAAGAGCAGTGAGAATGCAGTTGATCATGGCATGGCTCGAACTGATATCTGTGAGACAACAGAAGAGATTGAGAAGGGAGTAGTCATCACTGAGATTAGCAATATTGCCAGCCCTGATAAAACAGATATTCCAAACGGGTTGCCTCAAGATGAGACAGATGATGGATTTAACAATACTCAGGAAGATACTAACACAGAGGAAGTGACAGAAGAGAATTCTGACAGACCTGCAAAGGAAGAGAAAGGAGAGAATTCTGACAAAGATGTTTTGAAGAATATCCTTGAATTCTCACGTGCTTCTTCTGTGGTGGATTTTGAAATTCCAGTGTTGGATGTGAAATTTACTTCTCTTGAAAGTTGTAATGGCACTTGTTCTCTTGCAGCCCTTTTGTCTGAATCGCCGGAATCAAGGACTGAAGCATCTTGTGTGAAGGAAAGTGATGATGCAGCCCCGGTCAATGAGGAGTCGAGCTTGATTTTGGTGGAAGACGGGGAGCGGGTCGGTCCTGCTCCTGATGGTAGTTTTTCTGTGGATATGGATTTCTATAGTGTAGCAGAACCATTGAGCACATGGGGTGCAAATCTGCAGTGCGAAACATCCAGTAGCCATGAGACTTTTGCAGCAAGCCTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

791

Amino Acids

86.1

Weight (kDa)

4.26

Isoelectric Point (pI)

52.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G47940
fragaria_vesca FvH4_5g06191 FvH4_7g01170 FvH4_7g01170 FvH4_7g01170
malus_domestica MD00G1112200.v1.1 MD02G1309200.v1.1 MD07G1012500.v1.1
prunus_persica Prupe.2G015000_v2.0.a1
pyrus_communis pycom02g26050 pycom07g01030
rosa_chinensis RchiOBHm_Chr1g0316471
rosa_laevigata RLG00000030670
rosa_multiflora Rmu_sc0006790.1_g000005
rosa_roxburghii Rroxscaffold_4G00330970
rosa_rugosa Rorug01G0011100
rosa_samantha Rh1AG020600 Rh1BG015900 Rh1CG018900 Rh1DG016000
rosa_wichuraiana Rw1G001350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 24
Acc36I ACCTGC 2 cut(s) 1020, 1972
AccB7I CCANNNNNTGG 1 cut(s) 176
AccBSI CCGCTC 1 cut(s) 2233
AccI GTMKAC 2 cut(s) 264, 604
AccII CGCG 1 cut(s) 81
AciI CCGC 2 cut(s) 677, 2233
AclWI GGATC 5 cut(s) 135, 148, 656, 934, 1050
AcoI YGGCCR 2 cut(s) 135, 732
AcuI CTGAAG 3 cut(s) 432, 1503, 2172
AcvI CACGTG 1 cut(s) 2030
AcyI GRCGYC 1 cut(s) 21
AdeI CACNNNGTG 1 cut(s) 287
AfaI GTAC 5 cut(s) 244, 307, 445, 700, 1131
AfiI CCNNNNNNNGG 3 cut(s) 113, 176, 949
AflII CTTAAG 1 cut(s) 398
AluBI AGCT 9 cut(s) 36, 356, 510, 716, 1409, 1472, 1517, 1604, 2208
AluI AGCT 9 cut(s) 36, 356, 510, 716, 1409, 1472, 1517, 1604, 2208
Alw21I GWGCWC 5 cut(s) 38, 1172, 1606, 1665, 2306
Alw26I GTCTC 7 cut(s) 28, 108, 399, 1425, 1784, 1883, 2342
AlwI GGATC 5 cut(s) 135, 148, 656, 934, 1050
AlwNI CAGNNNCTG 1 cut(s) 176
Ama87I CYCGRG 1 cut(s) 249
AoxI GGCC 4 cut(s) 135, 732, 1367, 1547
ApeKI GCWGC 7 cut(s) 326, 1086, 1117, 1693, 2117, 2183, 2357
AseI ATTAAT 1 cut(s) 198
Asp700I GAANNNNTTC 3 cut(s) 345, 369, 1621
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 6 cut(s) 51, 179, 220, 1009, 1547, 2240
AsuC2I CCSGG 1 cut(s) 2189
AsuHPI GGTGA 4 cut(s) 76, 159, 184, 980
AvaI CYCGRG 1 cut(s) 249
AvaII GGWCC 5 cut(s) 51, 179, 220, 1009, 2240
BaeI ACNNNNGTAYC 2 cut(s) 427, 460
BalI TGGCCA 1 cut(s) 734
BamHI GGATCC 1 cut(s) 140
BanII GRGCYC 2 cut(s) 38, 1606
BauI CACGAG 1 cut(s) 1599
BbrPI CACGTG 1 cut(s) 2030
BbsI GAAGAC 3 cut(s) 1068, 1728, 2229
Bbv12I GWGCWC 5 cut(s) 38, 1172, 1606, 1665, 2306
BbvI GCAGC 7 cut(s) 313, 1098, 1129, 1705, 2129, 2195, 2369
BccI CCATC 8 cut(s) 476, 940, 1490, 1558, 1568, 1727, 1892, 2246
BceAI ACGGC 2 cut(s) 130, 150
BciVI GTATCC 2 cut(s) 907, 1572
BclI TGATCA 1 cut(s) 1759
BcnI CCSGG 1 cut(s) 2189
BcoDI GTCTC 7 cut(s) 28, 108, 399, 1425, 1784, 1883, 2342
BfaI CTAG 6 cut(s) 1155, 1274, 1337, 1394, 1406, 1538
BfmI CTRYAG 3 cut(s) 945, 2281, 2321
BfoI RGCGCY 1 cut(s) 69
BfrI CTTAAG 1 cut(s) 398
BfuAI ACCTGC 2 cut(s) 1020, 1972
BfuI GTATCC 2 cut(s) 907, 1572
BglII AGATCT 1 cut(s) 1001
BisI GCNGC 7 cut(s) 327, 1087, 1118, 1694, 2118, 2184, 2358
BlsI GCNGC 7 cut(s) 328, 1088, 1119, 1695, 2119, 2185, 2359
BmcAI AGTACT 2 cut(s) 244, 1131
Bme1390I CCNGG 1 cut(s) 2189
Bme18I GGWCC 5 cut(s) 51, 179, 220, 1009, 2240
BmeT110I CYCGRG 1 cut(s) 249
BmgT120I GGNCC 6 cut(s) 51, 179, 220, 1009, 1547, 2240
BmiI GGNNCC 2 cut(s) 142, 954
BmrFI CCNGG 1 cut(s) 2189
BmrI ACTGGG 2 cut(s) 469, 1242
BmsI GCATC 7 cut(s) 889, 892, 1378, 1406, 1711, 2165, 2170
BmuI ACTGGG 2 cut(s) 469, 1242
BpiI GAAGAC 3 cut(s) 1068, 1728, 2229
BpmI CTGGAG 1 cut(s) 1458
BpuEI CTTGAG 5 cut(s) 460, 635, 1124, 1156, 1866
BpuMI CCSGG 1 cut(s) 2189
BsaAI YACGTR 1 cut(s) 2030
BsaBI GATNNNNATC 1 cut(s) 576
BsaHI GRCGYC 1 cut(s) 21
BsaI GGTCTC 1 cut(s) 399
BsaJI CCNNGG 3 cut(s) 132, 1364, 2187
Bsc4I CCNNNNNNNGG 3 cut(s) 113, 176, 949
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 7 cut(s) 447, 464, 831, 985, 1248, 2060, 2337
Bse8I GATNNNNATC 1 cut(s) 576
BseDI CCNNGG 3 cut(s) 132, 1364, 2187
BseGI GGATG 6 cut(s) 907, 1318, 1550, 1610, 2074, 2333
BseJI GATNNNNATC 1 cut(s) 576
BseLI CCNNNNNNNGG 3 cut(s) 113, 176, 949
BseMII CTCAG 5 cut(s) 726, 1147, 1623, 1818, 1928
BseNI ACTGG 7 cut(s) 447, 464, 831, 985, 1248, 2060, 2337
BseRI GAGGAG 2 cut(s) 1649, 2213
BseX3I CGGCCG 1 cut(s) 135
BseXI GCAGC 7 cut(s) 313, 1098, 1129, 1705, 2129, 2195, 2369
BseYI CCCAGC 2 cut(s) 866, 1409
BsgI GTGCAG 2 cut(s) 1386, 1712
Bsh1236I CGCG 1 cut(s) 81
Bsh1285I CGRYCG 2 cut(s) 111, 138
BshFI GGCC 4 cut(s) 137, 734, 1369, 1549
BsiEI CGRYCG 2 cut(s) 111, 138
BsiHKAI GWGCWC 5 cut(s) 38, 1172, 1606, 1665, 2306
BsiHKCI CYCGRG 1 cut(s) 249
BsiSI CCGG 4 cut(s) 60, 138, 2138, 2189
BslFI GGGAC 2 cut(s) 461, 1555
BslI CCNNNNNNNGG 3 cut(s) 113, 176, 949
BsmAI GTCTC 7 cut(s) 28, 108, 399, 1425, 1784, 1883, 2342
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 2 cut(s) 461, 1555
BsmI GAATGC 1 cut(s) 1756
BsnI GGCC 4 cut(s) 137, 734, 1369, 1549
Bso31I GGTCTC 1 cut(s) 399
BsoBI CYCGRG 1 cut(s) 249
Bsp1286I GDGCHC 5 cut(s) 38, 1172, 1606, 1665, 2306
BspACI CCGC 2 cut(s) 677, 2233
BspANI GGCC 4 cut(s) 137, 734, 1369, 1549
BspCNI CTCAG 5 cut(s) 725, 1146, 1624, 1819, 1927
BspFNI CGCG 1 cut(s) 81
BspHI TCATGA 1 cut(s) 1705
BspLI GGNNCC 2 cut(s) 142, 954
BspMAI CTGCAG 1 cut(s) 2325
BspMI ACCTGC 2 cut(s) 1020, 1972
BspPI GGATC 5 cut(s) 135, 148, 656, 934, 1050
BspTI CTTAAG 1 cut(s) 398
BspTNI GGTCTC 1 cut(s) 399
BsrBI CCGCTC 1 cut(s) 2233
BsrFI RCCGGY 1 cut(s) 59
BsrI ACTGG 7 cut(s) 447, 464, 831, 985, 1248, 2060, 2337
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 3 cut(s) 132, 1364, 2187
BssNAI GTATAC 1 cut(s) 265
BssNI GRCGYC 1 cut(s) 21
BssSI CACGAG 1 cut(s) 1599
BssT1I CCWWGG 1 cut(s) 1364
Bst1107I GTATAC 1 cut(s) 265
Bst2BI CACGAG 1 cut(s) 1599
Bst4CI ACNGT 4 cut(s) 310, 609, 703, 1232
Bst6I CTCTTC 4 cut(s) 31, 1794, 1941, 1968
BstACI GRCGYC 1 cut(s) 21
BstAFI CTTAAG 1 cut(s) 398
BstBAI YACGTR 1 cut(s) 2030
BstC8I GCNNGC 3 cut(s) 1371, 1846, 2362
BstDEI CTNAG 7 cut(s) 422, 712, 843, 1133, 1632, 1827, 1914
BstDSI CCRYGG 1 cut(s) 132
BstF5I GGATG 6 cut(s) 907, 1318, 1550, 1610, 2074, 2333
BstFNI CGCG 1 cut(s) 81
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstMAI GTCTC 7 cut(s) 28, 108, 399, 1425, 1784, 1883, 2342
BstMCI CGRYCG 2 cut(s) 111, 138
BstMWI GCNNNNNNNGC 2 cut(s) 65, 1699
BstSCI CCNGG 1 cut(s) 2187
BstSFI CTRYAG 3 cut(s) 945, 2281, 2321
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 7 cut(s) 313, 1098, 1129, 1705, 2129, 2195, 2369
BstV2I GAAGAC 3 cut(s) 1068, 1728, 2229
BstX2I RGATCY 4 cut(s) 140, 939, 1001, 1042
BstYI RGATCY 4 cut(s) 140, 939, 1001, 1042
BstZ17I GTATAC 1 cut(s) 265
BstZI CGGCCG 1 cut(s) 135
BsuI GTATCC 2 cut(s) 907, 1572
BsuRI GGCC 4 cut(s) 137, 734, 1369, 1549
BtgI CCRYGG 1 cut(s) 132
BtsCI GGATG 6 cut(s) 907, 1318, 1550, 1610, 2074, 2333
BtsI GCAGTG 2 cut(s) 1750, 2330
BtsIMutI CAGTG 9 cut(s) 454, 708, 838, 1237, 1527, 1750, 1824, 2067, 2330
BveI ACCTGC 2 cut(s) 1020, 1972
Cac8I GCNNGC 3 cut(s) 1371, 1846, 2362
CaiI CAGNNNCTG 1 cut(s) 176
CciI TCATGA 1 cut(s) 1705
CfoI GCGC 1 cut(s) 68
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 6 cut(s) 51, 179, 220, 1009, 1547, 2240
CseI GACGC 2 cut(s) 70, 128
Csp6I GTAC 5 cut(s) 243, 306, 444, 699, 1130
CviQI GTAC 5 cut(s) 243, 306, 444, 699, 1130
DdeI CTNAG 7 cut(s) 422, 712, 843, 1133, 1632, 1827, 1914
DraI TTTAAA 1 cut(s) 1485
DraIII CACNNNGTG 1 cut(s) 287
EaeI YGGCCR 2 cut(s) 135, 732
EagI CGGCCG 1 cut(s) 135
Eam1104I CTCTTC 4 cut(s) 31, 1794, 1941, 1968
EarI CTCTTC 4 cut(s) 31, 1794, 1941, 1968
Ecl136II GAGCTC 2 cut(s) 36, 1604
EclXI CGGCCG 1 cut(s) 135
Eco130I CCWWGG 1 cut(s) 1364
Eco147I AGGCCT 1 cut(s) 1369
Eco24I GRGCYC 2 cut(s) 38, 1606
Eco31I GGTCTC 1 cut(s) 399
Eco32I GATATC 1 cut(s) 1783
Eco47I GGWCC 5 cut(s) 51, 179, 220, 1009, 2240
Eco52I CGGCCG 1 cut(s) 135
Eco53kI GAGCTC 2 cut(s) 36, 1604
Eco57I CTGAAG 3 cut(s) 432, 1503, 2172
Eco72I CACGTG 1 cut(s) 2030
Eco88I CYCGRG 1 cut(s) 249
EcoICRI GAGCTC 2 cut(s) 36, 1604
EcoRI GAATTC 5 cut(s) 523, 1150, 1951, 1987, 2021
EcoRV GATATC 1 cut(s) 1783
EcoT14I CCWWGG 1 cut(s) 1364
EcoT22I ATGCAT 1 cut(s) 1202
EcoT38I GRGCYC 2 cut(s) 38, 1606
ErhI CCWWGG 1 cut(s) 1364
Esp3I CGTCTC 1 cut(s) 28
FalI AAGNNNNNCTT 4 cut(s) 330, 362, 1357, 1389
FaqI GGGAC 2 cut(s) 461, 1555
FauI CCCGC 1 cut(s) 2226
FbaI TGATCA 1 cut(s) 1759
FblI GTMKAC 2 cut(s) 264, 604
Fnu4HI GCNGC 7 cut(s) 327, 1087, 1118, 1694, 2118, 2184, 2358
FokI GGATG 6 cut(s) 914, 1325, 1537, 1597, 2081, 2320
FriOI GRGCYC 2 cut(s) 38, 1606
Fsp4HI GCNGC 7 cut(s) 327, 1087, 1118, 1694, 2118, 2184, 2358
FspBI CTAG 6 cut(s) 1155, 1274, 1337, 1394, 1406, 1538
GlaI GCGC 1 cut(s) 67
GluI GCNGC 7 cut(s) 327, 1087, 1118, 1694, 2118, 2184, 2358
GsaI CCCAGC 2 cut(s) 870, 1413
GsuI CTGGAG 1 cut(s) 1458
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 4 cut(s) 137, 734, 1369, 1549
HapII CCGG 4 cut(s) 60, 138, 2138, 2189
HgaI GACGC 2 cut(s) 70, 128
HhaI GCGC 1 cut(s) 68
Hin1I GRCGYC 1 cut(s) 21
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 3 cut(s) 781, 1164, 1454
HindII GTYRAC 3 cut(s) 781, 1164, 1454
HindIII AAGCTT 1 cut(s) 1515
HpaI GTTAAC 1 cut(s) 781
HpaII CCGG 4 cut(s) 60, 138, 2138, 2189
HphI GGTGA 4 cut(s) 76, 159, 184, 980
Hpy166II GTNNAC 5 cut(s) 265, 605, 781, 1164, 1454
Hpy8I GTNNAC 5 cut(s) 265, 605, 781, 1164, 1454
Hpy99I CGWCG 5 cut(s) 20, 23, 59, 116, 122
HpyAV CCTTC 6 cut(s) 97, 1197, 1231, 1359, 1804, 2161
HpyCH4III ACNGT 4 cut(s) 310, 609, 703, 1232
HpyCH4IV ACGT 3 cut(s) 21, 1166, 2029
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 1699
HpyF3I CTNAG 7 cut(s) 422, 712, 843, 1133, 1632, 1827, 1914
HpySE526I ACGT 3 cut(s) 21, 1166, 2029
Hsp92I GRCGYC 1 cut(s) 21
HspAI GCGC 1 cut(s) 66
Ksp22I TGATCA 1 cut(s) 1759
KspAI GTTAAC 1 cut(s) 781
Lsp1109I GCAGC 7 cut(s) 313, 1098, 1129, 1705, 2129, 2195, 2369
LweI GCATC 7 cut(s) 889, 892, 1378, 1406, 1711, 2165, 2170
MaeI CTAG 6 cut(s) 1155, 1274, 1337, 1394, 1406, 1538
MaeII ACGT 3 cut(s) 21, 1166, 2029
MaeIII GTNAC 8 cut(s) 82, 165, 287, 609, 958, 1279, 1711, 1939
MbiI CCGCTC 1 cut(s) 2233
MfeI CAATTG 1 cut(s) 1380
MflI RGATCY 4 cut(s) 140, 939, 1001, 1042
MhlI GDGCHC 5 cut(s) 38, 1172, 1606, 1665, 2306
MlsI TGGCCA 1 cut(s) 734
MluNI TGGCCA 1 cut(s) 734
MlyI GAGTC 5 cut(s) 101, 261, 788, 1214, 2210
MmeI TCCRAC 2 cut(s) 1239, 2046
Mox20I TGGCCA 1 cut(s) 734
Mph1103I ATGCAT 1 cut(s) 1202
MroXI GAANNNNTTC 3 cut(s) 345, 369, 1621
MscI TGGCCA 1 cut(s) 734
MslI CAYNNNNRTG 3 cut(s) 734, 740, 1555
Msp20I TGGCCA 1 cut(s) 734
MspA1I CMGCKG 2 cut(s) 677, 716
MspCI CTTAAG 1 cut(s) 398
MspI CCGG 4 cut(s) 60, 138, 2138, 2189
MspR9I CCNGG 1 cut(s) 2189
MunI CAATTG 1 cut(s) 1380
Mva1269I GAATGC 1 cut(s) 1756
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 2 cut(s) 65, 1699
NciI CCSGG 1 cut(s) 2189
NlaIV GGNNCC 2 cut(s) 142, 954
NmuCI GTSAC 6 cut(s) 82, 165, 287, 609, 1711, 1939
NsiI ATGCAT 1 cut(s) 1202
PagI TCATGA 1 cut(s) 1705
PceI AGGCCT 1 cut(s) 1369
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PctI GAATGC 1 cut(s) 1756
PdmI GAANNNNTTC 3 cut(s) 345, 369, 1621
PflFI GACNNNGTC 1 cut(s) 20
PflMI CCANNNNNTGG 1 cut(s) 176
PkrI GCNGC 7 cut(s) 328, 1088, 1119, 1695, 2119, 2185, 2359
Ple19I CGATCG 1 cut(s) 111
PleI GAGTC 5 cut(s) 100, 260, 788, 1213, 2209
PmaCI CACGTG 1 cut(s) 2030
PmlI CACGTG 1 cut(s) 2030
PpsI GAGTC 5 cut(s) 100, 260, 788, 1213, 2209
Ppu21I YACGTR 1 cut(s) 2030
PshBI ATTAAT 1 cut(s) 198
Psp124BI GAGCTC 2 cut(s) 38, 1606
PspCI CACGTG 1 cut(s) 2030
PspFI CCCAGC 2 cut(s) 866, 1409
PspN4I GGNNCC 2 cut(s) 142, 954
PspPI GGNCC 6 cut(s) 51, 179, 220, 1009, 1547, 2240
PstI CTGCAG 1 cut(s) 2325
PstNI CAGNNNCTG 1 cut(s) 176
PsuI RGATCY 4 cut(s) 140, 939, 1001, 1042
PsyI GACNNNGTC 1 cut(s) 20
PvuI CGATCG 1 cut(s) 111
PvuII CAGCTG 1 cut(s) 716
RsaI GTAC 5 cut(s) 244, 307, 445, 700, 1131
RsaNI GTAC 5 cut(s) 243, 306, 444, 699, 1130
RseI CAYNNNNRTG 3 cut(s) 734, 740, 1555
SacI GAGCTC 2 cut(s) 38, 1606
SatI GCNGC 7 cut(s) 327, 1087, 1118, 1694, 2118, 2184, 2358
Sau96I GGNCC 6 cut(s) 51, 179, 220, 1009, 1547, 2240
ScaI AGTACT 2 cut(s) 244, 1131
SchI GAGTC 5 cut(s) 101, 261, 788, 1214, 2210
ScrFI CCNGG 1 cut(s) 2189
SduI GDGCHC 5 cut(s) 38, 1172, 1606, 1665, 2306
SfaNI GCATC 7 cut(s) 889, 892, 1378, 1406, 1711, 2165, 2170
SfcI CTRYAG 3 cut(s) 945, 2281, 2321
SgrAI CRCCGGYG 1 cut(s) 59
SinI GGWCC 5 cut(s) 51, 179, 220, 1009, 2240
SmiMI CAYNNNNRTG 3 cut(s) 734, 740, 1555
SmlI CTYRAG 6 cut(s) 398, 439, 614, 1103, 1171, 1881
SmoI CTYRAG 6 cut(s) 398, 439, 614, 1103, 1171, 1881
SseBI AGGCCT 1 cut(s) 1369
SsiI CCGC 2 cut(s) 677, 2233
SspI AATATT 1 cut(s) 1840
SspMI CTAG 6 cut(s) 1155, 1274, 1337, 1394, 1406, 1538
SstI GAGCTC 2 cut(s) 38, 1606
StuI AGGCCT 1 cut(s) 1369
StyD4I CCNGG 1 cut(s) 2187
StyI CCWWGG 1 cut(s) 1364
TaaI ACNGT 4 cut(s) 310, 609, 703, 1232
TaiI ACGT 3 cut(s) 24, 1169, 2032
TaqI TCGA 5 cut(s) 90, 111, 1024, 1774, 2204
TaqII GACCGA 1 cut(s) 2228
TatI WGTACW 4 cut(s) 242, 305, 698, 1129
TscAI CASTG 9 cut(s) 454, 708, 838, 1237, 1527, 1750, 1831, 2067, 2330
TseFI GTSAC 6 cut(s) 82, 165, 287, 609, 1711, 1939
TseI GCWGC 7 cut(s) 326, 1086, 1117, 1693, 2117, 2183, 2357
Tsp45I GTSAC 6 cut(s) 82, 165, 287, 609, 1711, 1939
TspGWI ACGGA 3 cut(s) 43, 153, 1453
TspRI CASTG 9 cut(s) 454, 708, 838, 1237, 1527, 1750, 1831, 2067, 2330
Tth111I GACNNNGTC 1 cut(s) 20
Van91I CCANNNNNTGG 1 cut(s) 176
Vha464I CTTAAG 1 cut(s) 398
VpaK11BI GGWCC 5 cut(s) 51, 179, 220, 1009, 2240
VspI ATTAAT 1 cut(s) 198
XbaI TCTAGA 1 cut(s) 1154
XcmI CCANNNNNNNNNTGG 1 cut(s) 2304
XmiI GTMKAC 2 cut(s) 264, 604
XmnI GAANNNNTTC 3 cut(s) 345, 369, 1621
XspI CTAG 6 cut(s) 1155, 1274, 1337, 1394, 1406, 1538
ZraI GACGTC 1 cut(s) 22
ZrmI AGTACT 2 cut(s) 244, 1131
Zsp2I ATGCAT 1 cut(s) 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.