MD02G1309200.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0010078
Physical Location & Seq
Forward (+)
36448215 .. 36451911
3697 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1309200.v1.1.491

Sequence Viewer

Length: 2478 bp
ATGGAAACACACGAGGACGAGATCGACAACCACGACACCACCGCTTCCTGGACCTCCGCCACAACCTGGACCGTCGCAGGCGGTTCCCTCACGAATTGCGTCTCATTCGAATCCTCTTTCTCTCCGATCGATGACGAGACTCCGAAATCCACCCCTGCATCCTCTCTTATCCTGCACCCTCCATCACCCGATTCGGGCCCTTGCGAGATCACCGTTAATTTTACACAAAAACATGAGGTCCAGCAGGTTTATGTTCGAAGTACTGCCCGAGTCTATGAGATATACTATGCACCCGATATACAGAGTGGCAATGAATATCTCTGCACTGTTCGCTGTGGCATTGCTGCCCGAGATGAAGAAGTGCTTCACACGGGTGACAATGAAGATGTTCGTTCTGCAAATTCAAATGGGTCGCTGAAGGACCCATCCGAAGATAAGTCAAGAAATGGAAATAGTCTGAACAGCAGTGAAGATGACTGGGTTGAAGTGAAAGTCTCAGATAGTAATGTGCTTGATAACAAAATCAATTCGTTGCAATCGAATTTGGGATCTGCACAGGATTTTTATGAAGCTACAGCACAGATTAGTGATGCAAGTCCTTGTGTATCCCTCACACTTCGTCTACTGTCGCTTGAGAGGAAAGATTGTGTATGTGTTGGTGAGGTGTATGTATTTGCTGATCCTGTTGATACATCTGATTCAGAAAACCAAGTTAATACTGTGGAAAATTCGGTTGGGAGTTCTCTCATGGCCATGCTTGTGCCTACTCTTTTACAATTTTCTAAAACAAGGGGTGCTAACGGAACACAAGACAAGCCAATTTCTGATACATGGGGAAAACAGAACTCTCTAGTGATTGGGTCAAAAGAAACTGATTCTACCAGTGTGACAACTAAGATTCAGGAGCAAGGAAAAGCCAGTATACCTGATCACCAAGAACAAGAAGTAAAGGTTCCAGATGTTAATAGGGCTACTACTAGTACTGCTCAGTTATGTATCCCGTCACAAGTTGAAAGCTCTGTCAACCAGCTGTATTCTCGAATGGGCAGAATAGAGGATCTATTTTTAAGGTTTGAAGAAAAGATGCTAAAACCAATGAGCAGCATTGAGGCAAGGCTTGAAAGGGTAGAGCAGCAACTTGAAGTACTGGTAAACAAATCGCAGAATTCTGGATTGCCAACATGCTCAAGATTCTATGCTTCTTCTTTCTCGTGCAATGAGTCTGAGTCTAACTCTTTCTATAATAGTGGAAATGATTATCCCCGTTGTGAGGCATTTGAATCAGGTAAGAAGGACATTCAATCAGATGCACCCTTGACTGCACCTAATGACATGTCTGCTTCAGTATATTCTACTCATTTGCTTCCAAGTCTGGTAGTAACTGCTCCTGAATTTTCAAACGGTGATGATGACGATGAGGAGGACGAAGAAGATCATACATCAGATGTAGTGATAGGTTCATCAGAAAAACCAAGGCCTGCTTTGACAATTGATGATGCTTTAGCATCTGCACTAGCTGGATTCATGTCTTTGACTTCAACCCAACCAGAGAAACATGCTCAAACTCTTTCGGTTAAAGCTCCTGATTTTTTAAATGAAGAAGATGGTAGCATTGAGAGAAAAGAATCAACAAGAGTGGAACATGAAGCAGACACTGATTCTTCCATGTGCCTTGGTGAAACTGGTGTGACAGAGAACATAAAAGGTTCACTTGCTGATTTGACGAAAAATTCTTCAGAGGGTGAGGGGAATGTAATAAAATCACCTAATGATGAGGAAACTGATAAAACACTCTTAGTCGATGGACTGGACCAGCATTATGAGGGTGGAGAAGGAGGAAAACTTGATGATGACAAGAGCATTGACAATGCAGTTGATCCAGCCAATGGTGGCATGTCTAGAACTGATTTTTGTCAGATAACAGAAGATATTGAAAATGAAGACATCAGCACTGAGATACGCAACATTCTGGACCCTGACAACGCTGATGTTCGAAACCAGTTGCCCCAACATCAGACTGATGATGGATATGATAACACGCAGGAAGATGCTAATACAGATTCTGATTTAACGCCTCCAAAGGAAGTGACAGAAGAGAAATCCGACAAAGATGCTTTGAAGAATATCCTCGATTTTTCACATGCTGCTTCTGTGGTGGATTTTGATATTCCAGTTCTGGATGTGAAATTCACTTCTCAGGATAGCTGCAATAATGGCTATTTTTCTCTCGAAGCCCTTTTAACCGAGTTGCCAGAATCAGTGACCGAAGCTCCTTCGGTAAAGAAAAGTGACGAGGTGCTCCCAGTTGGCTCTGACGGACATGACTTAATTTTGGTGGAGGACAGGGAGCCAGTTGGTCCCGCCTCTGAGGGTAATTTTTCTGTGGATATGGATTTCTATAGTATCGGAGAACCTTTGAGCTTGTGGGGTGACCAGACATGCAATAGCCATGAGACATTTGCAGCAAGTCTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

826

Amino Acids

89.91

Weight (kDa)

4.21

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G47940
fragaria_vesca FvH4_5g06191 FvH4_7g01170 FvH4_7g01170 FvH4_7g01170
malus_domestica MD00G1112200.v1.1 MD02G1309200.v1.1 MD07G1012500.v1.1
prunus_persica Prupe.2G015000_v2.0.a1
pyrus_communis pycom02g26050 pycom07g01030
rosa_chinensis RchiOBHm_Chr1g0316471
rosa_laevigata RLG00000030670
rosa_multiflora Rmu_sc0006790.1_g000005
rosa_roxburghii Rroxscaffold_4G00330970
rosa_rugosa Rorug01G0011100
rosa_samantha Rh1AG020600 Rh1BG015900 Rh1CG018900 Rh1DG016000
rosa_wichuraiana Rw1G001350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 235
AccB7I CCANNNNNTGG 2 cut(s) 66, 1886
AccI GTMKAC 2 cut(s) 622, 922
AciI CCGC 4 cut(s) 42, 57, 81, 2361
AclWI GGATC 4 cut(s) 556, 674, 1065, 1871
AcoI YGGCCR 1 cut(s) 750
AcsI RAATTY 7 cut(s) 400, 541, 727, 1165, 1391, 1729, 2186
AcuI CTGAAG 3 cut(s) 437, 1326, 1719
AfaI GTAC 3 cut(s) 262, 982, 1146
AfiI CCNNNNNNNGG 5 cut(s) 48, 66, 194, 1270, 1886
AflIII ACRYGT 1 cut(s) 1332
AhlI ACTAGT 1 cut(s) 977
AjnI CCWGG 2 cut(s) 47, 65
AjuI GAANNNNNNNTTGG 2 cut(s) 717, 749
AleI CACNNNNGTG 1 cut(s) 372
AluBI AGCT 8 cut(s) 572, 1017, 1030, 1517, 1580, 2205, 2270, 2421
AluI AGCT 8 cut(s) 572, 1017, 1030, 1517, 1580, 2205, 2270, 2421
Alw21I GWGCWC 1 cut(s) 2301
Alw26I GTCTC 5 cut(s) 106, 131, 499, 2447, 2474
AlwI GGATC 4 cut(s) 556, 674, 1065, 1871
AlwNI CAGNNNCTG 2 cut(s) 1655, 2063
Ama87I CYCGRG 2 cut(s) 267, 348
AoxI GGCC 3 cut(s) 196, 750, 1475
ApaI GGGCCC 1 cut(s) 200
ApeKI GCWGC 6 cut(s) 344, 1101, 1132, 2144, 2205, 2462
ApoI RAATTY 7 cut(s) 400, 541, 727, 1165, 1391, 1729, 2186
Asp700I GAANNNNTTC 2 cut(s) 363, 387
AspS9I GGNCC 9 cut(s) 51, 69, 196, 197, 238, 421, 1810, 1972, 2357
AsuII TTCGAA 3 cut(s) 108, 256, 1993
AvaI CYCGRG 2 cut(s) 267, 348
AvaII GGWCC 7 cut(s) 51, 69, 238, 421, 1810, 1972, 2357
BaeGI GKGCMC 1 cut(s) 200
BalI TGGCCA 1 cut(s) 752
BanII GRGCYC 1 cut(s) 200
BauI CACGAG 2 cut(s) 11, 1210
BbsI GAAGAC 1 cut(s) 1947
Bbv12I GWGCWC 1 cut(s) 2301
BbvI GCAGC 6 cut(s) 331, 1113, 1144, 2131, 2192, 2474
BccI CCATC 5 cut(s) 190, 433, 1598, 1796, 2018
BcgI CGANNNNNNTGC 2 cut(s) 2093, 2127
BciT130I CCWGG 2 cut(s) 49, 67
BciVI GTATCC 2 cut(s) 616, 1007
BclI TGATCA 1 cut(s) 928
BcoDI GTCTC 5 cut(s) 106, 131, 499, 2447, 2474
BcuI ACTAGT 1 cut(s) 977
BfaI CTAG 4 cut(s) 851, 978, 1514, 1899
BfmI CTRYAG 2 cut(s) 573, 2398
BfuAI ACCTGC 1 cut(s) 235
BfuI GTATCC 2 cut(s) 616, 1007
BisI GCNGC 6 cut(s) 345, 1102, 1133, 2145, 2206, 2463
BlsI GCNGC 6 cut(s) 346, 1103, 1134, 2146, 2207, 2464
BmcAI AGTACT 3 cut(s) 262, 982, 1146
Bme1390I CCNGG 2 cut(s) 49, 67
Bme18I GGWCC 7 cut(s) 51, 69, 238, 421, 1810, 1972, 2357
BmeT110I CYCGRG 2 cut(s) 267, 348
BmgT120I GGNCC 9 cut(s) 51, 69, 196, 197, 238, 421, 1810, 1972, 2357
BmiI GGNNCC 7 cut(s) 85, 198, 423, 954, 1974, 2349, 2359
BmrFI CCNGG 2 cut(s) 49, 67
BmrI ACTGGG 2 cut(s) 487, 2297
BmsI GCATC 8 cut(s) 167, 580, 1074, 1297, 1486, 1514, 2038, 2101
BmuI ACTGGG 2 cut(s) 487, 2297
BpiI GAAGAC 1 cut(s) 1947
BplI GAGNNNNNCTC 2 cut(s) 1217, 1249
Bpu14I TTCGAA 3 cut(s) 108, 256, 1993
BpuEI CTTGAG 2 cut(s) 653, 1171
Bsa29I ATCGAT 1 cut(s) 129
BsaJI CCNNGG 2 cut(s) 1472, 1672
BsaXI ACNNNNNCTCC 2 cut(s) 2254, 2284
Bsc4I CCNNNNNNNGG 5 cut(s) 48, 66, 194, 1270, 1886
Bse3DI GCAATG 3 cut(s) 316, 339, 1222
BseBI CCWGG 2 cut(s) 49, 67
BseCI ATCGAT 1 cut(s) 129
BseDI CCNNGG 2 cut(s) 1472, 1672
BseGI GGATG 3 cut(s) 158, 425, 2185
BseLI CCNNNNNNNGG 5 cut(s) 48, 66, 194, 1270, 1886
BseMI GCAATG 3 cut(s) 316, 339, 1222
BseMII CTCAG 6 cut(s) 510, 1001, 1215, 1944, 2210, 2358
BseRI GAGGAG 1 cut(s) 1433
BseSI GKGCMC 1 cut(s) 200
BseXI GCAGC 6 cut(s) 331, 1113, 1144, 2131, 2192, 2474
BsgI GTGCAG 5 cut(s) 158, 307, 537, 1305, 1494
Bsh1285I CGRYCG 1 cut(s) 129
BshFI GGCC 3 cut(s) 198, 752, 1477
BshVI ATCGAT 1 cut(s) 129
BsiEI CGRYCG 1 cut(s) 129
BsiHKAI GWGCWC 1 cut(s) 2301
BsiHKCI CYCGRG 2 cut(s) 267, 348
BslFI GGGAC 1 cut(s) 2343
BslI CCNNNNNNNGG 5 cut(s) 48, 66, 194, 1270, 1886
BsmAI GTCTC 5 cut(s) 106, 131, 499, 2447, 2474
BsmBI CGTCTC 1 cut(s) 106
BsmFI GGGAC 1 cut(s) 2343
BsnI GGCC 3 cut(s) 198, 752, 1477
BsoBI CYCGRG 2 cut(s) 267, 348
Bsp119I TTCGAA 3 cut(s) 108, 256, 1993
Bsp120I GGGCCC 1 cut(s) 196
Bsp1286I GDGCHC 2 cut(s) 200, 2301
Bsp143I GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
BspACI CCGC 4 cut(s) 42, 57, 81, 2361
BspANI GGCC 3 cut(s) 198, 752, 1477
BspCNI CTCAG 6 cut(s) 509, 1000, 1216, 1945, 2209, 2359
BspDI ATCGAT 1 cut(s) 129
BspLI GGNNCC 7 cut(s) 85, 198, 423, 954, 1974, 2349, 2359
BspMI ACCTGC 1 cut(s) 235
BspPI GGATC 4 cut(s) 556, 674, 1065, 1871
BspT104I TTCGAA 3 cut(s) 108, 256, 1993
BsrDI GCAATG 3 cut(s) 316, 339, 1222
BssECI CCNNGG 2 cut(s) 1472, 1672
BssMI GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
BssNAI GTATAC 1 cut(s) 923
BssSI CACGAG 2 cut(s) 11, 1210
BssT1I CCWWGG 2 cut(s) 1472, 1672
Bst1107I GTATAC 1 cut(s) 923
Bst2BI CACGAG 2 cut(s) 11, 1210
Bst2UI CCWGG 2 cut(s) 49, 67
Bst4CI ACNGT 6 cut(s) 73, 214, 328, 627, 721, 1403
Bst6I CTCTTC 1 cut(s) 2088
BstBI TTCGAA 3 cut(s) 108, 256, 1993
BstC8I GCNNGC 2 cut(s) 79, 1479
BstDEI CTNAG 8 cut(s) 496, 894, 987, 1224, 1795, 1953, 2196, 2367
BstEII GGTNACC 1 cut(s) 2429
BstF5I GGATG 3 cut(s) 158, 425, 2185
BstKTI GATC 9 cut(s) 24, 129, 210, 551, 682, 931, 1060, 1435, 1879
BstMAI GTCTC 5 cut(s) 106, 131, 499, 2447, 2474
BstMBI GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
BstMCI CGRYCG 1 cut(s) 129
BstMWI GCNNNNNNNGC 2 cut(s) 330, 2214
BstNI CCWGG 2 cut(s) 49, 67
BstNSI RCATGY 6 cut(s) 1185, 1336, 1559, 1897, 2144, 2442
BstPI GGTNACC 1 cut(s) 2429
BstSCI CCNGG 2 cut(s) 47, 65
BstSFI CTRYAG 2 cut(s) 573, 2398
BstSLI GKGCMC 1 cut(s) 200
BstV1I GCAGC 6 cut(s) 331, 1113, 1144, 2131, 2192, 2474
BstV2I GAAGAC 1 cut(s) 1947
BstX2I RGATCY 2 cut(s) 548, 1057
BstYI RGATCY 2 cut(s) 548, 1057
BstZ17I GTATAC 1 cut(s) 923
Bsu15I ATCGAT 1 cut(s) 129
BsuI GTATCC 2 cut(s) 616, 1007
BsuRI GGCC 3 cut(s) 198, 752, 1477
BsuTUI ATCGAT 1 cut(s) 129
BtsCI GGATG 3 cut(s) 158, 425, 2185
BtsI GCAGTG 1 cut(s) 472
BtsIMutI CAGTG 6 cut(s) 324, 472, 889, 1653, 1950, 2265
BveI ACCTGC 1 cut(s) 235
Cac8I GCNNGC 2 cut(s) 79, 1479
CaiI CAGNNNCTG 2 cut(s) 1655, 2063
Cfr13I GGNCC 9 cut(s) 51, 69, 196, 197, 238, 421, 1810, 1972, 2357
ClaI ATCGAT 1 cut(s) 129
CseI GACGC 1 cut(s) 88
Csp6I GTAC 3 cut(s) 261, 981, 1145
CspCI CAANNNNNGTGG 2 cut(s) 1617, 1652
CviQI GTAC 3 cut(s) 261, 981, 1145
DdeI CTNAG 8 cut(s) 496, 894, 987, 1224, 1795, 1953, 2196, 2367
DpnI GATC 9 cut(s) 23, 128, 209, 550, 681, 930, 1059, 1434, 1878
DpnII GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
DraI TTTAAA 1 cut(s) 1593
EaeI YGGCCR 1 cut(s) 750
Eam1104I CTCTTC 1 cut(s) 2088
EarI CTCTTC 1 cut(s) 2088
EciI GGCGGA 1 cut(s) 46
Eco130I CCWWGG 2 cut(s) 1472, 1672
Eco147I AGGCCT 1 cut(s) 1477
Eco24I GRGCYC 1 cut(s) 200
Eco47I GGWCC 7 cut(s) 51, 69, 238, 421, 1810, 1972, 2357
Eco57I CTGAAG 3 cut(s) 437, 1326, 1719
Eco88I CYCGRG 2 cut(s) 267, 348
Eco91I GGTNACC 1 cut(s) 2429
EcoO109I RGGNCCY 2 cut(s) 197, 421
EcoO65I GGTNACC 1 cut(s) 2429
EcoRI GAATTC 1 cut(s) 1165
EcoRII CCWGG 2 cut(s) 47, 65
EcoT14I CCWWGG 2 cut(s) 1472, 1672
EcoT38I GRGCYC 1 cut(s) 200
ErhI CCWWGG 2 cut(s) 1472, 1672
Esp3I CGTCTC 1 cut(s) 106
FalI AAGNNNNNCTT 6 cut(s) 348, 380, 1465, 1497, 1695, 1727
FaqI GGGAC 1 cut(s) 2343
FauI CCCGC 1 cut(s) 2368
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 2 cut(s) 622, 922
Fnu4HI GCNGC 6 cut(s) 345, 1102, 1133, 2145, 2206, 2463
FokI GGATG 3 cut(s) 145, 412, 2192
FriOI GRGCYC 1 cut(s) 200
Fsp4HI GCNGC 6 cut(s) 345, 1102, 1133, 2145, 2206, 2463
FspBI CTAG 4 cut(s) 851, 978, 1514, 1899
GluI GCNGC 6 cut(s) 345, 1102, 1133, 2145, 2206, 2463
HaeIII GGCC 3 cut(s) 198, 752, 1477
HgaI GACGC 1 cut(s) 88
HincII GTYRAC 1 cut(s) 1024
HindII GTYRAC 1 cut(s) 1024
Hpy166II GTNNAC 5 cut(s) 623, 923, 1024, 1153, 1709
Hpy8I GTNNAC 5 cut(s) 623, 923, 1024, 1153, 1709
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 4 cut(s) 412, 1285, 1826, 2283
HpyCH4III ACNGT 6 cut(s) 73, 214, 328, 627, 721, 1403
HpyF10VI GCNNNNNNNGC 2 cut(s) 330, 2214
HpyF3I CTNAG 8 cut(s) 496, 894, 987, 1224, 1795, 1953, 2196, 2367
Ksp22I TGATCA 1 cut(s) 928
Kzo9I GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
LmnI GCTCC 6 cut(s) 904, 1390, 1585, 2275, 2304, 2347
Lsp1109I GCAGC 6 cut(s) 331, 1113, 1144, 2131, 2192, 2474
LweI GCATC 8 cut(s) 167, 580, 1074, 1297, 1486, 1514, 2038, 2101
MaeI CTAG 4 cut(s) 851, 978, 1514, 1899
MaeIII GTNAC 9 cut(s) 374, 886, 1002, 1378, 1687, 2086, 2260, 2288, 2429
MalI GATC 9 cut(s) 23, 128, 209, 550, 681, 930, 1059, 1434, 1878
MboI GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
MfeI CAATTG 1 cut(s) 1488
MflI RGATCY 2 cut(s) 548, 1057
MhlI GDGCHC 2 cut(s) 200, 2301
MlsI TGGCCA 1 cut(s) 752
MluNI TGGCCA 1 cut(s) 752
MlyI GAGTC 4 cut(s) 133, 279, 1229, 1235
MmeI TCCRAC 1 cut(s) 2127
Mox20I TGGCCA 1 cut(s) 752
MroXI GAANNNNTTC 2 cut(s) 363, 387
MscI TGGCCA 1 cut(s) 752
MseI TTAA 9 cut(s) 216, 714, 963, 1067, 1575, 1592, 2069, 2240, 2327
MslI CAYNNNNRTG 3 cut(s) 372, 752, 758
Msp20I TGGCCA 1 cut(s) 752
MspA1I CMGCKG 1 cut(s) 1030
MspR9I CCNGG 2 cut(s) 49, 67
MunI CAATTG 1 cut(s) 1488
MvaI CCWGG 2 cut(s) 49, 67
MwoI GCNNNNNNNGC 2 cut(s) 330, 2214
NdeII GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
NlaIV GGNNCC 7 cut(s) 85, 198, 423, 954, 1974, 2349, 2359
NmuCI GTSAC 8 cut(s) 374, 886, 1002, 1687, 2086, 2260, 2288, 2429
NspI RCATGY 6 cut(s) 1185, 1336, 1559, 1897, 2144, 2442
NspV TTCGAA 3 cut(s) 108, 256, 1993
OliI CACNNNNGTG 1 cut(s) 372
PceI AGGCCT 1 cut(s) 1477
PciI ACATGT 1 cut(s) 1332
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 536
PdmI GAANNNNTTC 2 cut(s) 363, 387
PflMI CCANNNNNTGG 2 cut(s) 66, 1886
PfoI TCCNGGA 1 cut(s) 47
PkrI GCNGC 6 cut(s) 346, 1103, 1134, 2146, 2207, 2464
Ple19I CGATCG 1 cut(s) 129
PleI GAGTC 4 cut(s) 133, 278, 1228, 1234
PpsI GAGTC 4 cut(s) 133, 278, 1228, 1234
PpuMI RGGWCCY 1 cut(s) 421
PscI ACATGT 1 cut(s) 1332
Psp5II RGGWCCY 1 cut(s) 421
Psp6I CCWGG 2 cut(s) 47, 65
PspEI GGTNACC 1 cut(s) 2429
PspGI CCWGG 2 cut(s) 47, 65
PspN4I GGNNCC 7 cut(s) 85, 198, 423, 954, 1974, 2349, 2359
PspOMI GGGCCC 1 cut(s) 196
PspPI GGNCC 9 cut(s) 51, 69, 196, 197, 238, 421, 1810, 1972, 2357
PspPPI RGGWCCY 1 cut(s) 421
PstNI CAGNNNCTG 2 cut(s) 1655, 2063
PsuI RGATCY 2 cut(s) 548, 1057
PvuI CGATCG 1 cut(s) 129
PvuII CAGCTG 1 cut(s) 1030
RsaI GTAC 3 cut(s) 262, 982, 1146
RsaNI GTAC 3 cut(s) 261, 981, 1145
RseI CAYNNNNRTG 3 cut(s) 372, 752, 758
SaqAI TTAA 9 cut(s) 216, 714, 963, 1067, 1575, 1592, 2069, 2240, 2327
SatI GCNGC 6 cut(s) 345, 1102, 1133, 2145, 2206, 2463
Sau3AI GATC 9 cut(s) 21, 126, 207, 548, 679, 928, 1057, 1432, 1876
Sau96I GGNCC 9 cut(s) 51, 69, 196, 197, 238, 421, 1810, 1972, 2357
ScaI AGTACT 3 cut(s) 262, 982, 1146
SchI GAGTC 4 cut(s) 133, 279, 1229, 1235
ScrFI CCNGG 2 cut(s) 49, 67
SduI GDGCHC 2 cut(s) 200, 2301
SfaNI GCATC 8 cut(s) 167, 580, 1074, 1297, 1486, 1514, 2038, 2101
SfcI CTRYAG 2 cut(s) 573, 2398
SfuI TTCGAA 3 cut(s) 108, 256, 1993
SinI GGWCC 7 cut(s) 51, 69, 238, 421, 1810, 1972, 2357
SmiMI CAYNNNNRTG 3 cut(s) 372, 752, 758
SmlI CTYRAG 2 cut(s) 632, 1186
SmoI CTYRAG 2 cut(s) 632, 1186
SpeI ACTAGT 1 cut(s) 977
SseBI AGGCCT 1 cut(s) 1477
SsiI CCGC 4 cut(s) 42, 57, 81, 2361
SspMI CTAG 4 cut(s) 851, 978, 1514, 1899
StuI AGGCCT 1 cut(s) 1477
StyD4I CCNGG 2 cut(s) 47, 65
StyI CCWWGG 2 cut(s) 1472, 1672
TaaI ACNGT 6 cut(s) 73, 214, 328, 627, 721, 1403
TaqII GACCGA 1 cut(s) 2279
TatI WGTACW 3 cut(s) 260, 980, 1144
Tru1I TTAA 9 cut(s) 216, 714, 963, 1067, 1575, 1592, 2069, 2240, 2327
Tru9I TTAA 9 cut(s) 216, 714, 963, 1067, 1575, 1592, 2069, 2240, 2327
TscAI CASTG 6 cut(s) 331, 472, 889, 1660, 1957, 2265
TseFI GTSAC 8 cut(s) 374, 886, 1002, 1687, 2086, 2260, 2288, 2429
TseI GCWGC 6 cut(s) 344, 1101, 1132, 2144, 2205, 2462
Tsp45I GTSAC 8 cut(s) 374, 886, 1002, 1687, 2086, 2260, 2288, 2429
TspDTI ATGAA 9 cut(s) 327, 369, 396, 582, 1449, 1513, 1611, 1659, 1953
TspGWI ACGGA 2 cut(s) 816, 2331
TspRI CASTG 6 cut(s) 331, 472, 889, 1660, 1957, 2265
Van91I CCANNNNNTGG 2 cut(s) 66, 1886
VpaK11BI GGWCC 7 cut(s) 51, 69, 238, 421, 1810, 1972, 2357
XapI RAATTY 7 cut(s) 400, 541, 727, 1165, 1391, 1729, 2186
XbaI TCTAGA 1 cut(s) 1898
XceI RCATGY 6 cut(s) 1185, 1336, 1559, 1897, 2144, 2442
XmiI GTMKAC 2 cut(s) 622, 922
XmnI GAANNNNTTC 2 cut(s) 363, 387
XspI CTAG 4 cut(s) 851, 978, 1514, 1899
ZrmI AGTACT 3 cut(s) 262, 982, 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.