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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G47940 |
| fragaria_vesca | FvH4_5g06191 FvH4_7g01170 FvH4_7g01170 FvH4_7g01170 |
| malus_domestica | MD00G1112200.v1.1 MD02G1309200.v1.1 MD07G1012500.v1.1 |
| prunus_persica | Prupe.2G015000_v2.0.a1 |
| pyrus_communis | pycom02g26050 pycom07g01030 |
| rosa_chinensis | RchiOBHm_Chr1g0316471 |
| rosa_laevigata | RLG00000030670 |
| rosa_multiflora | Rmu_sc0006790.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00330970 |
| rosa_rugosa | Rorug01G0011100 |
| rosa_samantha | Rh1AG020600 Rh1BG015900 Rh1CG018900 Rh1DG016000 |
| rosa_wichuraiana | Rw1G001350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 68 |
| Acc36I | ACCTGC | 2 cut(s) | 68, 235 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 66, 1820 |
| AciI | CCGC | 2 cut(s) | 57, 719 |
| AclI | AACGTT | 1 cut(s) | 1545 |
| AclWI | GGATC | 6 cut(s) | 29, 556, 674, 1059, 1441, 1805 |
| AcoI | YGGCCR | 1 cut(s) | 750 |
| AcsI | RAATTY | 7 cut(s) | 145, 400, 1159, 1339, 1382, 2033, 2067 |
| AcuI | CTGAAG | 3 cut(s) | 1317, 1653, 1878 |
| AfaI | GTAC | 4 cut(s) | 262, 970, 976, 1140 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 48, 66, 194, 808, 1820 |
| AflII | CTTAAG | 1 cut(s) | 416 |
| AhlI | ACTAGT | 1 cut(s) | 971 |
| AjnI | CCWGG | 2 cut(s) | 30, 981 |
| AleI | CACNNNNGTG | 1 cut(s) | 372 |
| AluBI | AGCT | 6 cut(s) | 434, 572, 734, 1024, 1316, 1514 |
| AluI | AGCT | 6 cut(s) | 434, 572, 734, 1024, 1316, 1514 |
| Alw21I | GWGCWC | 1 cut(s) | 1713 |
| Alw26I | GTCTC | 1 cut(s) | 106 |
| AlwI | GGATC | 6 cut(s) | 29, 556, 674, 1059, 1441, 1805 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1910 |
| Ama87I | CYCGRG | 2 cut(s) | 267, 348 |
| AoxI | GGCC | 4 cut(s) | 196, 750, 1469, 1739 |
| ApaI | GGGCCC | 1 cut(s) | 200 |
| ApeKI | GCWGC | 3 cut(s) | 344, 1126, 2079 |
| ApoI | RAATTY | 7 cut(s) | 145, 400, 1159, 1339, 1382, 2033, 2067 |
| AseI | ATTAAT | 1 cut(s) | 216 |
| AspS9I | GGNCC | 8 cut(s) | 51, 69, 196, 197, 421, 1018, 1739, 1744 |
| AsuHPI | GGTGA | 9 cut(s) | 177, 202, 386, 671, 923, 1406, 1622, 1688, 1689 |
| AsuII | TTCGAA | 2 cut(s) | 108, 256 |
| AvaI | CYCGRG | 2 cut(s) | 267, 348 |
| AvaII | GGWCC | 5 cut(s) | 51, 69, 421, 1018, 1744 |
| BaeGI | GKGCMC | 1 cut(s) | 200 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 492, 525 |
| BalI | TGGCCA | 1 cut(s) | 752 |
| BanII | GRGCYC | 1 cut(s) | 200 |
| Bbv12I | GWGCWC | 1 cut(s) | 1713 |
| BbvI | GCAGC | 3 cut(s) | 331, 1138, 2066 |
| BccI | CCATC | 5 cut(s) | 433, 1532, 1667, 1730, 1952 |
| BciT130I | CCWGG | 2 cut(s) | 32, 983 |
| BciVI | GTATCC | 2 cut(s) | 616, 1001 |
| BclI | TGATCA | 4 cut(s) | 382, 928, 1308, 1717 |
| BcoDI | GTCTC | 1 cut(s) | 106 |
| BcuI | ACTAGT | 1 cut(s) | 971 |
| BfaI | CTAG | 4 cut(s) | 851, 966, 972, 1833 |
| BfmI | CTRYAG | 2 cut(s) | 573, 1255 |
| BfrI | CTTAAG | 1 cut(s) | 416 |
| BfuAI | ACCTGC | 2 cut(s) | 68, 235 |
| BfuI | GTATCC | 2 cut(s) | 616, 1001 |
| BisI | GCNGC | 3 cut(s) | 345, 1127, 2080 |
| BlsI | GCNGC | 3 cut(s) | 346, 1128, 2081 |
| BmcAI | AGTACT | 4 cut(s) | 262, 970, 976, 1140 |
| Bme1390I | CCNGG | 2 cut(s) | 32, 983 |
| Bme18I | GGWCC | 5 cut(s) | 51, 69, 421, 1018, 1744 |
| BmeT110I | CYCGRG | 2 cut(s) | 267, 348 |
| BmgT120I | GGNCC | 8 cut(s) | 51, 69, 196, 197, 421, 1018, 1739, 1744 |
| BmiI | GGNNCC | 3 cut(s) | 85, 198, 423 |
| BmrFI | CCNGG | 2 cut(s) | 32, 983 |
| BmrI | ACTGGG | 1 cut(s) | 867 |
| BmsI | GCATC | 5 cut(s) | 580, 1068, 1288, 1480, 1972 |
| BmuI | ACTGGG | 1 cut(s) | 867 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1211, 1243 |
| Bpu14I | TTCGAA | 2 cut(s) | 108, 256 |
| BpuEI | CTTGAG | 1 cut(s) | 653 |
| BsaBI | GATNNNNATC | 2 cut(s) | 381, 1986 |
| BsaJI | CCNNGG | 3 cut(s) | 981, 1466, 1606 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 48, 66, 194, 808, 1820 |
| Bse1I | ACTGG | 4 cut(s) | 862, 882, 1146, 1933 |
| Bse3DI | GCAATG | 3 cut(s) | 316, 339, 1216 |
| Bse8I | GATNNNNATC | 2 cut(s) | 381, 1986 |
| BseBI | CCWGG | 2 cut(s) | 32, 983 |
| BseDI | CCNNGG | 3 cut(s) | 981, 1466, 1606 |
| BseGI | GGATG | 3 cut(s) | 158, 425, 1414 |
| BseJI | GATNNNNATC | 2 cut(s) | 381, 1986 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 48, 66, 194, 808, 1820 |
| BseMI | GCAATG | 3 cut(s) | 316, 339, 1216 |
| BseMII | CTCAG | 4 cut(s) | 744, 1209, 1741, 1746 |
| BseNI | ACTGG | 4 cut(s) | 862, 882, 1146, 1933 |
| BseRI | GAGGAG | 2 cut(s) | 106, 109 |
| BseSI | GKGCMC | 1 cut(s) | 200 |
| BseXI | GCAGC | 3 cut(s) | 331, 1138, 2066 |
| BseYI | CCCAGC | 1 cut(s) | 734 |
| BsgI | GTGCAG | 3 cut(s) | 158, 307, 537 |
| BshFI | GGCC | 4 cut(s) | 198, 752, 1471, 1741 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1713 |
| BsiHKCI | CYCGRG | 2 cut(s) | 267, 348 |
| BsiSI | CCGG | 1 cut(s) | 1742 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 48, 66, 194, 808, 1820 |
| BsmAI | GTCTC | 1 cut(s) | 106 |
| BsmBI | CGTCTC | 1 cut(s) | 106 |
| BsmI | GAATGC | 2 cut(s) | 1750, 1807 |
| BsnI | GGCC | 4 cut(s) | 198, 752, 1471, 1741 |
| BsoBI | CYCGRG | 2 cut(s) | 267, 348 |
| Bsp119I | TTCGAA | 2 cut(s) | 108, 256 |
| Bsp120I | GGGCCC | 1 cut(s) | 196 |
| Bsp1286I | GDGCHC | 2 cut(s) | 200, 1713 |
| BspACI | CCGC | 2 cut(s) | 57, 719 |
| BspANI | GGCC | 4 cut(s) | 198, 752, 1471, 1741 |
| BspCNI | CTCAG | 4 cut(s) | 743, 1210, 1740, 1747 |
| BspLI | GGNNCC | 3 cut(s) | 85, 198, 423 |
| BspMI | ACCTGC | 2 cut(s) | 68, 235 |
| BspPI | GGATC | 6 cut(s) | 29, 556, 674, 1059, 1441, 1805 |
| BspT104I | TTCGAA | 2 cut(s) | 108, 256 |
| BspTI | CTTAAG | 1 cut(s) | 416 |
| BsrDI | GCAATG | 3 cut(s) | 316, 339, 1216 |
| BsrI | ACTGG | 4 cut(s) | 862, 882, 1146, 1933 |
| BssECI | CCNNGG | 3 cut(s) | 981, 1466, 1606 |
| BssT1I | CCWWGG | 2 cut(s) | 1466, 1606 |
| Bst2UI | CCWGG | 2 cut(s) | 32, 983 |
| Bst4CI | ACNGT | 6 cut(s) | 73, 328, 467, 479, 627, 1259 |
| Bst6I | CTCTTC | 2 cut(s) | 49, 2013 |
| BstAFI | CTTAAG | 1 cut(s) | 416 |
| BstBI | TTCGAA | 2 cut(s) | 108, 256 |
| BstC8I | GCNNGC | 2 cut(s) | 919, 1473 |
| BstDEI | CTNAG | 7 cut(s) | 435, 496, 730, 894, 1218, 1727, 1755 |
| BstF5I | GGATG | 3 cut(s) | 158, 425, 1414 |
| BstMAI | GTCTC | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1747 |
| BstNI | CCWGG | 2 cut(s) | 32, 983 |
| BstNSI | RCATGY | 3 cut(s) | 1179, 1831, 2079 |
| BstSCI | CCNGG | 2 cut(s) | 30, 981 |
| BstSFI | CTRYAG | 2 cut(s) | 573, 1255 |
| BstSLI | GKGCMC | 1 cut(s) | 200 |
| BstV1I | GCAGC | 3 cut(s) | 331, 1138, 2066 |
| BstX2I | RGATCY | 2 cut(s) | 548, 1051 |
| BstYI | RGATCY | 2 cut(s) | 548, 1051 |
| BsuI | GTATCC | 2 cut(s) | 616, 1001 |
| BsuRI | GGCC | 4 cut(s) | 198, 752, 1471, 1741 |
| BtgZI | GCGATG | 1 cut(s) | 1026 |
| BtsCI | GGATG | 3 cut(s) | 158, 425, 1414 |
| BtsIMutI | CAGTG | 4 cut(s) | 324, 472, 889, 1713 |
| BveI | ACCTGC | 2 cut(s) | 68, 235 |
| Cac8I | GCNNGC | 2 cut(s) | 919, 1473 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1910 |
| Cfr13I | GGNCC | 8 cut(s) | 51, 69, 196, 197, 421, 1018, 1739, 1744 |
| CseI | GACGC | 1 cut(s) | 88 |
| Csp6I | GTAC | 4 cut(s) | 261, 969, 975, 1139 |
| CviQI | GTAC | 4 cut(s) | 261, 969, 975, 1139 |
| DdeI | CTNAG | 7 cut(s) | 435, 496, 730, 894, 1218, 1727, 1755 |
| DraI | TTTAAA | 1 cut(s) | 1527 |
| EaeI | YGGCCR | 1 cut(s) | 750 |
| Eam1104I | CTCTTC | 2 cut(s) | 49, 2013 |
| EarI | CTCTTC | 2 cut(s) | 49, 2013 |
| EciI | GGCGGA | 1 cut(s) | 46 |
| Eco130I | CCWWGG | 2 cut(s) | 1466, 1606 |
| Eco147I | AGGCCT | 1 cut(s) | 1471 |
| Eco24I | GRGCYC | 1 cut(s) | 200 |
| Eco32I | GATATC | 2 cut(s) | 238, 1864 |
| Eco47I | GGWCC | 5 cut(s) | 51, 69, 421, 1018, 1744 |
| Eco57I | CTGAAG | 3 cut(s) | 1317, 1653, 1878 |
| Eco88I | CYCGRG | 2 cut(s) | 267, 348 |
| EcoO109I | RGGNCCY | 2 cut(s) | 197, 421 |
| EcoRI | GAATTC | 3 cut(s) | 145, 1159, 2033 |
| EcoRII | CCWGG | 2 cut(s) | 30, 981 |
| EcoRV | GATATC | 2 cut(s) | 238, 1864 |
| EcoT14I | CCWWGG | 2 cut(s) | 1466, 1606 |
| EcoT38I | GRGCYC | 1 cut(s) | 200 |
| ErhI | CCWWGG | 2 cut(s) | 1466, 1606 |
| Esp3I | CGTCTC | 1 cut(s) | 106 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1459, 1491, 1761, 1793 |
| FbaI | TGATCA | 4 cut(s) | 382, 928, 1308, 1717 |
| Fnu4HI | GCNGC | 3 cut(s) | 345, 1127, 2080 |
| FokI | GGATG | 3 cut(s) | 145, 412, 1421 |
| FriOI | GRGCYC | 1 cut(s) | 200 |
| Fsp4HI | GCNGC | 3 cut(s) | 345, 1127, 2080 |
| FspBI | CTAG | 4 cut(s) | 851, 966, 972, 1833 |
| GluI | GCNGC | 3 cut(s) | 345, 1127, 2080 |
| GsaI | CCCAGC | 1 cut(s) | 738 |
| HaeIII | GGCC | 4 cut(s) | 198, 752, 1471, 1741 |
| HapII | CCGG | 1 cut(s) | 1742 |
| HgaI | GACGC | 1 cut(s) | 88 |
| HpaII | CCGG | 1 cut(s) | 1742 |
| HphI | GGTGA | 9 cut(s) | 177, 202, 386, 671, 923, 1406, 1622, 1688, 1689 |
| Hpy166II | GTNNAC | 5 cut(s) | 51, 688, 1018, 1643, 2093 |
| Hpy8I | GTNNAC | 5 cut(s) | 51, 688, 1018, 1643, 2093 |
| Hpy99I | CGWCG | 4 cut(s) | 17, 20, 134, 137 |
| HpyAV | CCTTC | 1 cut(s) | 115 |
| HpyCH4III | ACNGT | 6 cut(s) | 73, 328, 467, 479, 627, 1259 |
| HpyCH4IV | ACGT | 2 cut(s) | 1545, 1945 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1747 |
| HpyF3I | CTNAG | 7 cut(s) | 435, 496, 730, 894, 1218, 1727, 1755 |
| HpySE526I | ACGT | 2 cut(s) | 1545, 1945 |
| Ksp22I | TGATCA | 4 cut(s) | 382, 928, 1308, 1717 |
| LmnI | GCTCC | 2 cut(s) | 1381, 1519 |
| Lsp1109I | GCAGC | 3 cut(s) | 331, 1138, 2066 |
| LweI | GCATC | 5 cut(s) | 580, 1068, 1288, 1480, 1972 |
| MaeI | CTAG | 4 cut(s) | 851, 966, 972, 1833 |
| MaeII | ACGT | 2 cut(s) | 1545, 1945 |
| MaeIII | GTNAC | 5 cut(s) | 183, 1369, 1541, 1621, 2020 |
| MfeI | CAATTG | 2 cut(s) | 536, 1482 |
| MflI | RGATCY | 2 cut(s) | 548, 1051 |
| MhlI | GDGCHC | 2 cut(s) | 200, 1713 |
| MlsI | TGGCCA | 1 cut(s) | 752 |
| MluNI | TGGCCA | 1 cut(s) | 752 |
| MlyI | GAGTC | 5 cut(s) | 419, 683, 1223, 1229, 1740 |
| Mox20I | TGGCCA | 1 cut(s) | 752 |
| MscI | TGGCCA | 1 cut(s) | 752 |
| MseI | TTAA | 7 cut(s) | 216, 417, 957, 1389, 1509, 1526, 2003 |
| MslI | CAYNNNNRTG | 2 cut(s) | 372, 758 |
| Msp20I | TGGCCA | 1 cut(s) | 752 |
| MspA1I | CMGCKG | 1 cut(s) | 734 |
| MspCI | CTTAAG | 1 cut(s) | 416 |
| MspI | CCGG | 1 cut(s) | 1742 |
| MspR9I | CCNGG | 2 cut(s) | 32, 983 |
| MunI | CAATTG | 2 cut(s) | 536, 1482 |
| Mva1269I | GAATGC | 2 cut(s) | 1750, 1807 |
| MvaI | CCWGG | 2 cut(s) | 32, 983 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1747 |
| NlaIV | GGNNCC | 3 cut(s) | 85, 198, 423 |
| NmuCI | GTSAC | 3 cut(s) | 183, 1621, 2020 |
| NspI | RCATGY | 3 cut(s) | 1179, 1831, 2079 |
| NspV | TTCGAA | 2 cut(s) | 108, 256 |
| OliI | CACNNNNGTG | 1 cut(s) | 372 |
| PaqCI | CACCTGC | 1 cut(s) | 68 |
| PceI | AGGCCT | 1 cut(s) | 1471 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 21, 1410, 1419 |
| PctI | GAATGC | 2 cut(s) | 1750, 1807 |
| PfeI | GAWTC | 9 cut(s) | 110, 191, 698, 875, 898, 946, 1185, 1274, 1994 |
| PflFI | GACNNNGTC | 1 cut(s) | 859 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 66, 1820 |
| PkrI | GCNGC | 3 cut(s) | 346, 1128, 2081 |
| PleI | GAGTC | 5 cut(s) | 418, 683, 1222, 1228, 1739 |
| PpsI | GAGTC | 5 cut(s) | 418, 683, 1222, 1228, 1739 |
| PpuMI | RGGWCCY | 1 cut(s) | 421 |
| PshBI | ATTAAT | 1 cut(s) | 216 |
| Psp1406I | AACGTT | 1 cut(s) | 1545 |
| Psp5II | RGGWCCY | 1 cut(s) | 421 |
| Psp6I | CCWGG | 2 cut(s) | 30, 981 |
| PspFI | CCCAGC | 1 cut(s) | 734 |
| PspGI | CCWGG | 2 cut(s) | 30, 981 |
| PspN4I | GGNNCC | 3 cut(s) | 85, 198, 423 |
| PspOMI | GGGCCC | 1 cut(s) | 196 |
| PspPI | GGNCC | 8 cut(s) | 51, 69, 196, 197, 421, 1018, 1739, 1744 |
| PspPPI | RGGWCCY | 1 cut(s) | 421 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1910 |
| PsuI | RGATCY | 2 cut(s) | 548, 1051 |
| PsyI | GACNNNGTC | 1 cut(s) | 859 |
| PvuII | CAGCTG | 1 cut(s) | 734 |
| RsaI | GTAC | 4 cut(s) | 262, 970, 976, 1140 |
| RsaNI | GTAC | 4 cut(s) | 261, 969, 975, 1139 |
| RseI | CAYNNNNRTG | 2 cut(s) | 372, 758 |
| SaqAI | TTAA | 7 cut(s) | 216, 417, 957, 1389, 1509, 1526, 2003 |
| SatI | GCNGC | 3 cut(s) | 345, 1127, 2080 |
| Sau96I | GGNCC | 8 cut(s) | 51, 69, 196, 197, 421, 1018, 1739, 1744 |
| ScaI | AGTACT | 4 cut(s) | 262, 970, 976, 1140 |
| SchI | GAGTC | 5 cut(s) | 419, 683, 1223, 1229, 1740 |
| ScrFI | CCNGG | 2 cut(s) | 32, 983 |
| SduI | GDGCHC | 2 cut(s) | 200, 1713 |
| SfaNI | GCATC | 5 cut(s) | 580, 1068, 1288, 1480, 1972 |
| SfcI | CTRYAG | 2 cut(s) | 573, 1255 |
| SfuI | TTCGAA | 2 cut(s) | 108, 256 |
| SinI | GGWCC | 5 cut(s) | 51, 69, 421, 1018, 1744 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 372, 758 |
| SmlI | CTYRAG | 2 cut(s) | 416, 632 |
| SmoI | CTYRAG | 2 cut(s) | 416, 632 |
| SpeI | ACTAGT | 1 cut(s) | 971 |
| SseBI | AGGCCT | 1 cut(s) | 1471 |
| SsiI | CCGC | 2 cut(s) | 57, 719 |
| SspMI | CTAG | 4 cut(s) | 851, 966, 972, 1833 |
| StuI | AGGCCT | 1 cut(s) | 1471 |
| StyD4I | CCNGG | 2 cut(s) | 30, 981 |
| StyI | CCWWGG | 2 cut(s) | 1466, 1606 |
| TaaI | ACNGT | 6 cut(s) | 73, 328, 467, 479, 627, 1259 |
| TaiI | ACGT | 2 cut(s) | 1548, 1948 |
| TaqI | TCGA | 9 cut(s) | 24, 108, 129, 256, 1033, 1734, 1866, 1990, 2065 |
| TatI | WGTACW | 4 cut(s) | 260, 968, 974, 1138 |
| TfiI | GAWTC | 9 cut(s) | 110, 191, 698, 875, 898, 946, 1185, 1274, 1994 |
| Tru1I | TTAA | 7 cut(s) | 216, 417, 957, 1389, 1509, 1526, 2003 |
| Tru9I | TTAA | 7 cut(s) | 216, 417, 957, 1389, 1509, 1526, 2003 |
| TscAI | CASTG | 4 cut(s) | 331, 472, 889, 1720 |
| TseFI | GTSAC | 3 cut(s) | 183, 1621, 2020 |
| TseI | GCWGC | 3 cut(s) | 344, 1126, 2079 |
| Tsp45I | GTSAC | 3 cut(s) | 183, 1621, 2020 |
| TspDTI | ATGAA | 8 cut(s) | 327, 369, 582, 608, 1335, 1443, 1545, 1593 |
| TspGWI | ACGGA | 2 cut(s) | 171, 1988 |
| TspRI | CASTG | 4 cut(s) | 331, 472, 889, 1720 |
| Tth111I | GACNNNGTC | 1 cut(s) | 859 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 66, 1820 |
| Vha464I | CTTAAG | 1 cut(s) | 416 |
| VpaK11BI | GGWCC | 5 cut(s) | 51, 69, 421, 1018, 1744 |
| VspI | ATTAAT | 1 cut(s) | 216 |
| XapI | RAATTY | 7 cut(s) | 145, 400, 1159, 1339, 1382, 2033, 2067 |
| XbaI | TCTAGA | 1 cut(s) | 1832 |
| XceI | RCATGY | 3 cut(s) | 1179, 1831, 2079 |
| XspI | CTAG | 4 cut(s) | 851, 966, 972, 1833 |
| ZrmI | AGTACT | 4 cut(s) | 262, 970, 976, 1140 |