FvH4_7g03480

Pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0014786
Physical Location & Seq
Forward (+)
3862226 .. 3866100
3875 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g03480.t1

Sequence Viewer

Length: 1551 bp
ATGCTCATAGATAACCTTTCCTTTTTGCCTTTCTTCCTTTCCTTTCCCTCAAAAAAATCGGAATTAGGGAGGAGTATGAGCAGGAGCAAGCGACACCGTGATTACCCTGATCAACCCGAACCCGGACCCGAATCTGGGAAGAAACACCAGCATTCCAATTCGGAGCCGACCTTTCCGTCATACCTGGACTCTGGGAAACCCCTGCCTCCCAAAATCAAGCTGCTGTGTGCAATTGTGGCCGAAATCCACTGCCTCTCGGTGGAAGAGACCTTAAACGACACCGGTATTCGGGTGAGCCAACATGACGTGGAAGAGGTCCTCAAGCTCTCCTACGCTTTCCCGGGTCCCGCCCTCAAGTTCTTCCGCTGGTCTGGTCGTCAGCTCAACGAGCACCACTCTCCCTATGCTTGGAATTTGGTTGTTGATCTGTTGGGTAAGAATTGCTTCTTTGATGCCATGTGGGACGCCATCAAGTCCATGAACAAAGAAAGGTTACTCTCTTTGGCCACTTTTGCTTCTGTTTTTAGTAGTTATGTGGTTGCCGATAAAACCCCTGAGGCTATCATGACCTTTGAGGTTATGGACCAATATGGTGTTGCTAGAGATATTGTGGCGTTCAATTCTCTCTTGAGTGCCATCTGTAGAGATGGCAAGACCTCCGATGCCTTTGATTTTTACTACATTGCTAAGGATAAGATCAGGCCGGACGCTGATACTTATGCCATCCTGTTGGAGGGGTGGGAGAGCGAAGGCAATGTTGCCTCTGCCACCAAGGTTTTGGATGAGATGGTGAGTCAGATTGGTTGGGATCCCACCAATGTGCCCGCCTACGATTCATATTTGAATACTCTGCTCAAGGGGAATAATGGGATTTGCGTGGCGCTGGACTTTTTTGACACCTTGAAAGCTAAGAGGTGTTATCCGGGGGTTAAGTTTTTCAGGCTTGCACTTGATGAGTGTGTCAACGAAGGCAATGTTGGTGGAGCTGAGGCTCTTTGGGAGGCAATGGTAGGGGGACTTGGTTTGCAAGCTGATACCAGTATGTATAATTTGATGATTTCTTTGCATTGCCATGGAAACAATATTAGTGTAGCAAAAAGGATGCTGGATGAGATGGTCTACAATGGGGCATTCCCAAATTCGCAGACATATAACATGGTGTTTAAGATGCTCATTAAGAATAGGAAGTTACAGGAGGCTGGGGCTTTGTTCACTGAGATGATTAAAAATGAGTGTATTCTGGACCAGGTTAATTGTACTGCTGCAGTCAGGATATACTTGGATTTGGGGGACCCTTATTTTGCTATAAAAGTCTGGAAATTTATGATAGAAAATTACCATTCTGGCTTGGAGGAAACTGGGAATTTTTTGGTTCTAGGACTTCGCGATATGAACAGGGTCCCAGAAGCAGTCAAGTATGCAGAGGATATGATCCTAAGAGGAATCAAGTTGAGTTCTTCTTCAATGTCGAAACTCAAAGACAGCCTTGTCCGAGCAAAGAAGGAATACATGTATGTTGATCTTGCATCAACCATGAACACTGTTGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

517

Amino Acids

57.98

Weight (kDa)

5.69

Isoelectric Point (pI)

39.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 201 - 246 8.7e-08 PPR repeat family
PPR_2 PF13041 345 - 392 1.5e-09 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014786)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g03480
malus_domestica MD09G1262300.v1.1
prunus_persica Prupe.3G160100_v2.0.a1
pyrus_communis pycom09g17670
rosa_chinensis RchiOBHm_Chr3g0493431
rosa_laevigata RLG00000022714
rosa_multiflora Rmu_co8321897.1_g000001 Rmu_sc0003935.1_g000001 Rmu_sc0019660.1_g000001
rosa_roxburghii Rroxscaffold_6G00391590
rosa_rugosa Rorug03G0261000
rosa_samantha Rh3AG310100 Rh3BG346200 Rh3CG343800 Rh3DG345200
rosa_wichuraiana Rw0G011150 Rw3G027240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 175, 1487
AccI GTMKAC 1 cut(s) 1119
AccII CGCG 1 cut(s) 1386
AciI CCGC 3 cut(s) 348, 364, 825
AclWI GGATC 3 cut(s) 803, 816, 1426
AcoI YGGCCR 2 cut(s) 237, 504
AcsI RAATTY 4 cut(s) 412, 1138, 1319, 1363
AcyI GRCGYC 1 cut(s) 465
AfaI GTAC 1 cut(s) 1258
AfiI CCNNNNNNNGG 7 cut(s) 122, 134, 135, 259, 288, 408, 733
AflIII ACRYGT 1 cut(s) 1509
AgeI ACCGGT 1 cut(s) 281
AgsI TTSAA 4 cut(s) 619, 844, 904, 1464
AjiI CACGTC 1 cut(s) 307
AjnI CCWGG 2 cut(s) 183, 1245
AjuI GAANNNNNNNTTGG 2 cut(s) 960, 992
AleI CACNNNNGTG 1 cut(s) 818
AluBI AGCT 6 cut(s) 220, 325, 382, 908, 986, 1031
AluI AGCT 6 cut(s) 220, 325, 382, 908, 986, 1031
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 1 cut(s) 260
AlwI GGATC 3 cut(s) 803, 816, 1426
Ama87I CYCGRG 1 cut(s) 340
AoxI GGCC 3 cut(s) 237, 504, 701
ApeKI GCWGC 2 cut(s) 220, 1262
ApoI RAATTY 4 cut(s) 412, 1138, 1319, 1363
ArsI GACNNNNNNTTYG 2 cut(s) 1283, 1315
AsiGI ACCGGT 1 cut(s) 281
Asp700I GAANNNNTTC 1 cut(s) 443
AspLEI GCGC 1 cut(s) 883
AspS9I GGNCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
AsuC2I CCSGG 4 cut(s) 123, 341, 342, 924
AsuHPI GGTGA 2 cut(s) 304, 802
AvaI CYCGRG 1 cut(s) 340
AvaII GGWCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
AxyI CCTNAGG 1 cut(s) 555
BaeGI GKGCMC 1 cut(s) 825
BalI TGGCCA 1 cut(s) 506
BamHI GGATCC 1 cut(s) 808
Bbv12I GWGCWC 1 cut(s) 393
BbvCI CCTCAGC 1 cut(s) 987
BbvI GCAGC 2 cut(s) 207, 1249
BccI CCATC 6 cut(s) 476, 641, 644, 731, 781, 1108
BciT130I CCWGG 2 cut(s) 185, 1247
BclI TGATCA 1 cut(s) 109
BcnI CCSGG 4 cut(s) 123, 341, 342, 924
BcoDI GTCTC 1 cut(s) 260
BfaI CTAG 2 cut(s) 600, 1376
BfmI CTRYAG 2 cut(s) 640, 1263
BfoI RGCGCY 1 cut(s) 884
BisI GCNGC 2 cut(s) 221, 1263
BlsI GCNGC 2 cut(s) 222, 1264
Bme1390I CCNGG 6 cut(s) 123, 185, 341, 342, 924, 1247
Bme18I GGWCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
BmeT110I CYCGRG 1 cut(s) 340
BmgBI CACGTC 1 cut(s) 307
BmgT120I GGNCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
BmiI GGNNCC 9 cut(s) 127, 165, 345, 346, 810, 1292, 1293, 1400, 1401
BmrFI CCNGG 6 cut(s) 123, 185, 341, 342, 924, 1247
BmrI ACTGGG 1 cut(s) 1368
BmsI GCATC 5 cut(s) 442, 652, 1092, 1158, 1535
BmuI ACTGGG 1 cut(s) 1368
BplI GAGNNNNNCTC 2 cut(s) 380, 412
Bpu10I CCTNAGC 2 cut(s) 687, 987
BpuEI CTTGAG 4 cut(s) 305, 338, 649, 839
BpuMI CCSGG 4 cut(s) 123, 341, 342, 924
BsaHI GRCGYC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 260
BsaJI CCNNGG 4 cut(s) 340, 771, 923, 1072
BsaWI WCCGGW 1 cut(s) 281
Bsc4I CCNNNNNNNGG 7 cut(s) 122, 134, 135, 259, 288, 408, 733
Bse118I RCCGGY 1 cut(s) 281
Bse1I ACTGG 2 cut(s) 1038, 1363
Bse21I CCTNAGG 1 cut(s) 555
Bse3DI GCAATG 5 cut(s) 681, 760, 979, 1011, 1066
BseBI CCWGG 2 cut(s) 185, 1247
BseDI CCNNGG 4 cut(s) 340, 771, 923, 1072
BseGI GGATG 4 cut(s) 723, 787, 1107, 1114
BseLI CCNNNNNNNGG 7 cut(s) 122, 134, 135, 259, 288, 408, 733
BseMI GCAATG 5 cut(s) 681, 760, 979, 1011, 1066
BseMII CTCAG 3 cut(s) 546, 978, 1206
BseNI ACTGG 2 cut(s) 1038, 1363
BseRI GAGGAG 1 cut(s) 85
BseSI GKGCMC 1 cut(s) 825
BseXI GCAGC 2 cut(s) 207, 1249
BseYI CCCAGC 1 cut(s) 1199
Bsh1236I CGCG 1 cut(s) 1386
BshFI GGCC 3 cut(s) 239, 506, 703
BshTI ACCGGT 1 cut(s) 281
BsiHKAI GWGCWC 1 cut(s) 393
BsiHKCI CYCGRG 1 cut(s) 340
BsiSI CCGG 5 cut(s) 123, 282, 341, 704, 923
BslFI GGGAC 5 cut(s) 330, 476, 1029, 1304, 1385
BslI CCNNNNNNNGG 7 cut(s) 122, 134, 135, 259, 288, 408, 733
BsmAI GTCTC 1 cut(s) 260
BsmFI GGGAC 5 cut(s) 330, 476, 1029, 1304, 1385
BsmI GAATGC 2 cut(s) 151, 1130
BsnI GGCC 3 cut(s) 239, 506, 703
Bso31I GGTCTC 1 cut(s) 260
BsoBI CYCGRG 1 cut(s) 340
Bsp1286I GDGCHC 2 cut(s) 393, 825
Bsp143I GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
Bsp19I CCATGG 1 cut(s) 1072
Bsp68I TCGCGA 1 cut(s) 1386
BspACI CCGC 3 cut(s) 348, 364, 825
BspANI GGCC 3 cut(s) 239, 506, 703
BspCNI CTCAG 3 cut(s) 547, 979, 1207
BspFNI CGCG 1 cut(s) 1386
BspHI TCATGA 1 cut(s) 564
BspLI GGNNCC 9 cut(s) 127, 165, 345, 346, 810, 1292, 1293, 1400, 1401
BspMAI CTGCAG 1 cut(s) 1267
BspPI GGATC 3 cut(s) 803, 816, 1426
BspTNI GGTCTC 1 cut(s) 260
BsrDI GCAATG 5 cut(s) 681, 760, 979, 1011, 1066
BsrFI RCCGGY 1 cut(s) 281
BsrI ACTGG 2 cut(s) 1038, 1363
BssAI RCCGGY 1 cut(s) 281
BssECI CCNNGG 4 cut(s) 340, 771, 923, 1072
BssMI GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
BssNI GRCGYC 1 cut(s) 465
BssT1I CCWWGG 2 cut(s) 771, 1072
Bst2UI CCWGG 2 cut(s) 185, 1247
Bst4CI ACNGT 2 cut(s) 98, 1543
Bst6I CTCTTC 2 cut(s) 258, 306
BstACI GRCGYC 1 cut(s) 465
BstC8I GCNNGC 4 cut(s) 89, 825, 945, 1029
BstDEI CTNAG 6 cut(s) 555, 687, 909, 987, 1215, 1436
BstDSI CCRYGG 1 cut(s) 1072
BstENI CCTNNNNNAGG 1 cut(s) 731
BstF5I GGATG 4 cut(s) 723, 787, 1107, 1114
BstFNI CGCG 1 cut(s) 1386
BstH2I RGCGCY 1 cut(s) 884
BstHHI GCGC 1 cut(s) 883
BstKTI GATC 6 cut(s) 112, 427, 699, 811, 1434, 1522
BstMAI GTCTC 1 cut(s) 260
BstMBI GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
BstMWI GCNNNNNNNGC 3 cut(s) 236, 388, 512
BstNI CCWGG 2 cut(s) 185, 1247
BstNSI RCATGY 1 cut(s) 1513
BstSCI CCNGG 6 cut(s) 121, 183, 339, 340, 922, 1245
BstSFI CTRYAG 2 cut(s) 640, 1263
BstSLI GKGCMC 1 cut(s) 825
BstUI CGCG 1 cut(s) 1386
BstV1I GCAGC 2 cut(s) 207, 1249
BstX2I RGATCY 1 cut(s) 808
BstXI CCANNNNNNTGG 2 cut(s) 730, 778
BstYI RGATCY 1 cut(s) 808
Bsu36I CCTNAGG 1 cut(s) 555
BsuRI GGCC 3 cut(s) 239, 506, 703
BtgI CCRYGG 1 cut(s) 1072
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 4 cut(s) 723, 787, 1107, 1114
BtsI GCAGTG 1 cut(s) 247
BtsIMutI CAGTG 3 cut(s) 247, 1212, 1539
BtuMI TCGCGA 1 cut(s) 1386
Cac8I GCNNGC 4 cut(s) 89, 825, 945, 1029
CciI TCATGA 1 cut(s) 564
CfoI GCGC 1 cut(s) 883
Cfr10I RCCGGY 1 cut(s) 281
Cfr13I GGNCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
Cfr9I CCCGGG 1 cut(s) 340
CseI GACGC 2 cut(s) 473, 716
CsiI ACCWGGT 1 cut(s) 1245
Csp6I GTAC 1 cut(s) 1257
CspAI ACCGGT 1 cut(s) 281
CspCI CAANNNNNGTGG 2 cut(s) 961, 996
CviAII CATG 8 cut(s) 302, 457, 478, 565, 1073, 1156, 1510, 1534
CviQI GTAC 1 cut(s) 1257
DdeI CTNAG 6 cut(s) 555, 687, 909, 987, 1215, 1436
DpnI GATC 6 cut(s) 111, 426, 698, 810, 1433, 1521
DpnII GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
DrdI GACNNNNNNGTC 2 cut(s) 175, 1487
DseDI GACNNNNNNGTC 2 cut(s) 175, 1487
EaeI YGGCCR 2 cut(s) 237, 504
Eam1104I CTCTTC 2 cut(s) 258, 306
EarI CTCTTC 2 cut(s) 258, 306
Eco130I CCWWGG 2 cut(s) 771, 1072
Eco31I GGTCTC 1 cut(s) 260
Eco47I GGWCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
Eco81I CCTNAGG 1 cut(s) 555
Eco88I CYCGRG 1 cut(s) 340
EcoNI CCTNNNNNAGG 1 cut(s) 731
EcoO109I RGGNCCY 4 cut(s) 316, 344, 1291, 1399
EcoRII CCWGG 2 cut(s) 183, 1245
EcoT14I CCWWGG 2 cut(s) 771, 1072
ErhI CCWWGG 2 cut(s) 771, 1072
FaeI CATG 8 cut(s) 305, 460, 481, 568, 1076, 1159, 1513, 1537
FalI AAGNNNNNCTT 4 cut(s) 428, 460, 1470, 1502
FaqI GGGAC 5 cut(s) 330, 476, 1029, 1304, 1385
FatI CATG 8 cut(s) 301, 456, 477, 564, 1072, 1155, 1509, 1533
FauI CCCGC 2 cut(s) 355, 832
FbaI TGATCA 1 cut(s) 109
FblI GTMKAC 1 cut(s) 1119
Fnu4HI GCNGC 2 cut(s) 221, 1263
FokI GGATG 4 cut(s) 710, 794, 1114, 1121
Fsp4HI GCNGC 2 cut(s) 221, 1263
FspBI CTAG 2 cut(s) 600, 1376
GlaI GCGC 1 cut(s) 882
GluI GCNGC 2 cut(s) 221, 1263
GsaI CCCAGC 1 cut(s) 1203
HaeII RGCGCY 1 cut(s) 884
HaeIII GGCC 3 cut(s) 239, 506, 703
HapII CCGG 5 cut(s) 123, 282, 341, 704, 923
HgaI GACGC 2 cut(s) 473, 716
HhaI GCGC 1 cut(s) 883
Hin1I GRCGYC 1 cut(s) 465
Hin1II CATG 8 cut(s) 305, 460, 481, 568, 1076, 1159, 1513, 1537
Hin6I GCGC 1 cut(s) 881
HinP1I GCGC 1 cut(s) 881
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HinfI GANTC 5 cut(s) 131, 188, 793, 833, 1443
HpaII CCGG 5 cut(s) 123, 282, 341, 704, 923
HphI GGTGA 2 cut(s) 304, 802
Hpy166II GTNNAC 3 cut(s) 964, 1120, 1212
Hpy188I TCNGA 5 cut(s) 61, 163, 661, 798, 1493
Hpy188III TCNNGA 6 cut(s) 565, 628, 1241, 1270, 1315, 1385
Hpy8I GTNNAC 3 cut(s) 964, 1120, 1212
HpyAV CCTTC 3 cut(s) 743, 962, 1495
HpyCH4III ACNGT 2 cut(s) 98, 1543
HpyCH4IV ACGT 1 cut(s) 306
HpyCH4V TGCA 7 cut(s) 230, 947, 1027, 1066, 1265, 1421, 1526
HpyF10VI GCNNNNNNNGC 3 cut(s) 236, 388, 512
HpyF3I CTNAG 6 cut(s) 555, 687, 909, 987, 1215, 1436
HpySE526I ACGT 1 cut(s) 306
Hsp92I GRCGYC 1 cut(s) 465
Hsp92II CATG 8 cut(s) 305, 460, 481, 568, 1076, 1159, 1513, 1537
HspAI GCGC 1 cut(s) 881
KflI GGGWCCC 3 cut(s) 344, 1291, 1399
Ksp22I TGATCA 1 cut(s) 109
Kzo9I GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
LmnI GCTCC 3 cut(s) 84, 163, 983
Lsp1109I GCAGC 2 cut(s) 207, 1249
LweI GCATC 5 cut(s) 442, 652, 1092, 1158, 1535
MabI ACCWGGT 1 cut(s) 1245
MaeI CTAG 2 cut(s) 600, 1376
MaeII ACGT 1 cut(s) 306
MaeIII GTNAC 2 cut(s) 492, 1188
MalI GATC 6 cut(s) 111, 426, 698, 810, 1433, 1521
MboI GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
MboII GAAGA 7 cut(s) 25, 151, 275, 323, 352, 1449, 1452
MfeI CAATTG 1 cut(s) 231
MflI RGATCY 1 cut(s) 808
MhlI GDGCHC 2 cut(s) 393, 825
MlsI TGGCCA 1 cut(s) 506
MluNI TGGCCA 1 cut(s) 506
MlyI GAGTC 2 cut(s) 182, 802
MmeI TCCRAC 1 cut(s) 711
Mox20I TGGCCA 1 cut(s) 506
MroXI GAANNNNTTC 1 cut(s) 443
MscI TGGCCA 1 cut(s) 506
MseI TTAA 6 cut(s) 272, 930, 1164, 1176, 1224, 1251
MslI CAYNNNNRTG 3 cut(s) 818, 1071, 1217
Msp20I TGGCCA 1 cut(s) 506
MspA1I CMGCKG 1 cut(s) 366
MspI CCGG 5 cut(s) 123, 282, 341, 704, 923
MspR9I CCNGG 6 cut(s) 123, 185, 341, 342, 924, 1247
MunI CAATTG 1 cut(s) 231
Mva1269I GAATGC 2 cut(s) 151, 1130
MvaI CCWGG 2 cut(s) 185, 1247
MvnI CGCG 1 cut(s) 1386
MwoI GCNNNNNNNGC 3 cut(s) 236, 388, 512
NciI CCSGG 4 cut(s) 123, 341, 342, 924
NcoI CCATGG 1 cut(s) 1072
NdeII GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
NlaIII CATG 8 cut(s) 305, 460, 481, 568, 1076, 1159, 1513, 1537
NlaIV GGNNCC 9 cut(s) 127, 165, 345, 346, 810, 1292, 1293, 1400, 1401
NruI TCGCGA 1 cut(s) 1386
NspI RCATGY 1 cut(s) 1513
OliI CACNNNNGTG 1 cut(s) 818
PagI TCATGA 1 cut(s) 564
PciI ACATGT 1 cut(s) 1509
PctI GAATGC 2 cut(s) 151, 1130
PdmI GAANNNNTTC 1 cut(s) 443
PfeI GAWTC 3 cut(s) 131, 833, 1443
PinAI ACCGGT 1 cut(s) 281
PkrI GCNGC 2 cut(s) 222, 1264
PleI GAGTC 2 cut(s) 182, 801
PpsI GAGTC 2 cut(s) 182, 801
PpuMI RGGWCCY 4 cut(s) 316, 344, 1291, 1399
PscI ACATGT 1 cut(s) 1509
Psp5II RGGWCCY 4 cut(s) 316, 344, 1291, 1399
Psp6I CCWGG 2 cut(s) 183, 1245
PspFI CCCAGC 1 cut(s) 1199
PspGI CCWGG 2 cut(s) 183, 1245
PspN4I GGNNCC 9 cut(s) 127, 165, 345, 346, 810, 1292, 1293, 1400, 1401
PspPI GGNCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
PspPPI RGGWCCY 4 cut(s) 316, 344, 1291, 1399
PstI CTGCAG 1 cut(s) 1267
PsuI RGATCY 1 cut(s) 808
RruI TCGCGA 1 cut(s) 1386
RsaI GTAC 1 cut(s) 1258
RsaNI GTAC 1 cut(s) 1257
RseI CAYNNNNRTG 3 cut(s) 818, 1071, 1217
SaqAI TTAA 6 cut(s) 272, 930, 1164, 1176, 1224, 1251
SatI GCNGC 2 cut(s) 221, 1263
Sau3AI GATC 6 cut(s) 109, 424, 696, 808, 1431, 1519
Sau96I GGNCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
SchI GAGTC 2 cut(s) 182, 802
ScrFI CCNGG 6 cut(s) 123, 185, 341, 342, 924, 1247
SduI GDGCHC 2 cut(s) 393, 825
SexAI ACCWGGT 1 cut(s) 1245
SfaNI GCATC 5 cut(s) 442, 652, 1092, 1158, 1535
SfcI CTRYAG 2 cut(s) 640, 1263
SinI GGWCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
SmaI CCCGGG 1 cut(s) 342
SmiMI CAYNNNNRTG 3 cut(s) 818, 1071, 1217
SmlI CTYRAG 4 cut(s) 320, 353, 628, 854
SmoI CTYRAG 4 cut(s) 320, 353, 628, 854
SsiI CCGC 3 cut(s) 348, 364, 825
SspI AATATT 1 cut(s) 1084
SspMI CTAG 2 cut(s) 600, 1376
StyD4I CCNGG 6 cut(s) 121, 183, 339, 340, 922, 1245
StyI CCWWGG 2 cut(s) 771, 1072
TaaI ACNGT 2 cut(s) 98, 1543
TaiI ACGT 1 cut(s) 309
TaqI TCGA 1 cut(s) 1469
TatI WGTACW 1 cut(s) 1256
TfiI GAWTC 3 cut(s) 131, 833, 1443
Tru1I TTAA 6 cut(s) 272, 930, 1164, 1176, 1224, 1251
Tru9I TTAA 6 cut(s) 272, 930, 1164, 1176, 1224, 1251
TscAI CASTG 3 cut(s) 254, 1219, 1546
TseI GCWGC 2 cut(s) 220, 1262
TspDTI ATGAA 4 cut(s) 494, 825, 1406, 1550
TspGWI ACGGA 1 cut(s) 165
TspMI CCCGGG 1 cut(s) 340
TspRI CASTG 3 cut(s) 254, 1219, 1546
VpaK11BI GGWCC 7 cut(s) 125, 316, 344, 583, 1243, 1291, 1399
XagI CCTNNNNNAGG 1 cut(s) 731
XapI RAATTY 4 cut(s) 412, 1138, 1319, 1363
XceI RCATGY 1 cut(s) 1513
XcmI CCANNNNNNNNNTGG 1 cut(s) 775
XmaI CCCGGG 1 cut(s) 340
XmiI GTMKAC 1 cut(s) 1119
XmnI GAANNNNTTC 1 cut(s) 443
XspI CTAG 2 cut(s) 600, 1376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.