RLG00000022714

Pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0014786
Physical Location & Seq
Forward (+)
10381168 .. 10383857
2690 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022714

Sequence Viewer

Length: 1506 bp
ATGAGCAGAACAAAGCGACACCGTGATTACCCACCTCCTTCCTCTCCTTGTCGAAACCCTAATCAACCGAAACCCGAACCCGAACCCGAACCCGAACCCGCGAAGAAACACCACCAATCCGACCCTACCTTTCCCTCATACCTGGACACTCCCAATCCCTTACCTCCCAAAATCAAACTGCTGTGTGCAATTGTGGCCGAAATCCACTGTCTCTCCGTCGAAGAAACGTTGACCGACACTGGTATTCGAGTGACCCAGCAAGACGTTGAAGAGGTCCTCAAGCTCTCCTACGCCTTCCCGGGCCCCGCCCTCAAGTTCTTTCGGTGGTCCGGTCGTCAGCTCAATGAAGACCACAGCCCATATTCTTGGAATCTGGTTGTTGATCTCTTGGGCAAGAATTGCTTCTTTGATGCCATGTGGGACGCCATCAAGTCAATGAAGCAAGCAAGGTTACTCTCTTTGGCCACTTTTGCTTCTGTTTTTAGTAGTTATGTAGTTGCCCATCGCACTCCCGAGGCTCTTATGACATTTGAGGTTATGGATCAATATGGTGTTCCTACAGATATTGTAGCATTGAATTCTCTTTTGAGTGCAATTTGTAGACATGGCAAGACGGTTGATGCCCTTGATTTTTACTACATTGCTAAGGACAAGATCAGGCCGGACCCCGATACTTACGCCATCTTGTTGGAGGGGTGGGAGAGTGAAGGCAATGTAGCCTCTGCTACCAAGGTTTTGGATGAGATGGTGAGTCAGATTGGTTGGGATCCAACCAATGTGCCCGCCTACGATTCCTATTTGAACACTTTGCTTAACGGGCCTAATGGGATTCGCCAGGCGCTGGACTTCTTTGAGACCTTGAAAGCTAAGAGGTGTTATCCAGGGGTCAAGTTTTTCAGGCTTGCGCTTGATGAGTGTGTCAAGAAAGGCGATGCTAGGGGAGCTGAGGCTCTTTGGGAGGCAATGGTAGGCAGACTTGGCTTGCAACCTGATACCAATATGTATAATTTGATGATTTCTTTGCACTGCCATGGAAACAATATTAATGTAGCAAAAAGGATACTGGACGAGATGGTCTACAATGGGGCATTTCCGAATTCGCAAACATATAACATGTTGTTTAAGATGCTCATTAAGAATAGGAAGTTACAGGAGGCTGGGGTTTTGTTTACTGAGATGATTAAAAATGAGTGTGTTCTGGACCAGGATAATTGTATTGCTGCAGTCAGGACATGCTTGGATTTGGGGGACCCTTATTTTGCTATAAAAGTCTGGAAGTTTATGATAGAAAATTACCGTTCTGACTTGGAGGATACTGGGAATTTGTTGGTTCTAGGACTTCGCAATCTGAACAGAGTCCCAGAAGCTGTCAAGTATGCAGAGGATATGATGCTAAGAGGAATCAAGTTAAGTTCTTCTTCAATGTCAAAACTCAAAGACAGCCTTATCCAAGCAAAGAAGCAATACATGTCTGATGAACTTTTGAGAAAGTCGAAAGCTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

502

Amino Acids

56.72

Weight (kDa)

6.35

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 325 - 378 8.5e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 330 - 378 1.3e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014786)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g03480
malus_domestica MD09G1262300.v1.1
prunus_persica Prupe.3G160100_v2.0.a1
pyrus_communis pycom09g17670
rosa_chinensis RchiOBHm_Chr3g0493431
rosa_laevigata RLG00000022714
rosa_multiflora Rmu_co8321897.1_g000001 Rmu_sc0003935.1_g000001 Rmu_sc0019660.1_g000001
rosa_roxburghii Rroxscaffold_6G00391590
rosa_rugosa Rorug03G0261000
rosa_samantha Rh3AG310100 Rh3BG346200 Rh3CG343800 Rh3DG345200
rosa_wichuraiana Rw0G011150 Rw3G027240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1073
AccB7I CCANNNNNTGG 1 cut(s) 841
AccI GTMKAC 2 cut(s) 601, 1077
AccII CGCG 1 cut(s) 101
AciI CCGC 3 cut(s) 99, 306, 783
AclI AACGTT 1 cut(s) 227
AclWI GGATC 3 cut(s) 549, 761, 774
AcoI YGGCCR 2 cut(s) 195, 462
AcsI RAATTY 3 cut(s) 577, 1096, 1321
AcyI GRCGYC 1 cut(s) 423
AfiI CCNNNNNNNGG 1 cut(s) 841
AflIII ACRYGT 2 cut(s) 1113, 1467
AgsI TTSAA 5 cut(s) 269, 577, 802, 862, 1422
AjnI CCWGG 4 cut(s) 141, 834, 880, 1203
AluBI AGCT 6 cut(s) 283, 340, 866, 944, 1367, 1499
AluI AGCT 6 cut(s) 283, 340, 866, 944, 1367, 1499
Alw26I GTCTC 2 cut(s) 215, 848
AlwI GGATC 3 cut(s) 549, 761, 774
AlwNI CAGNNNCTG 2 cut(s) 841, 1367
Ama87I CYCGRG 2 cut(s) 298, 512
AoxI GGCC 5 cut(s) 195, 301, 462, 659, 818
ApaI GGGCCC 1 cut(s) 305
ApeKI GCWGC 1 cut(s) 1220
ApoI RAATTY 3 cut(s) 577, 1096, 1321
ArsI GACNNNNNNTTYG 2 cut(s) 1241, 1273
AseI ATTAAT 1 cut(s) 1044
Asp700I GAANNNNTTC 1 cut(s) 401
AspLEI GCGC 2 cut(s) 841, 907
AspS9I GGNCC 8 cut(s) 274, 301, 302, 327, 664, 818, 1201, 1249
AsuC2I CCSGG 2 cut(s) 299, 300
AsuHPI GGTGA 1 cut(s) 760
AvaI CYCGRG 2 cut(s) 298, 512
AvaII GGWCC 5 cut(s) 274, 327, 664, 1201, 1249
BaeGI GKGCMC 2 cut(s) 305, 783
BalI TGGCCA 1 cut(s) 464
BamHI GGATCC 1 cut(s) 766
BanII GRGCYC 1 cut(s) 305
BbsI GAAGAC 1 cut(s) 354
BbvCI CCTCAGC 1 cut(s) 945
BbvI GCAGC 1 cut(s) 1207
BccI CCATC 5 cut(s) 434, 510, 689, 739, 1066
BciT130I CCWGG 4 cut(s) 143, 836, 882, 1205
BciVI GTATCC 2 cut(s) 1053, 1306
BcnI CCSGG 2 cut(s) 299, 300
BcoDI GTCTC 2 cut(s) 215, 848
BfaI CTAG 2 cut(s) 936, 1334
BfmI CTRYAG 2 cut(s) 558, 1221
BfoI RGCGCY 1 cut(s) 842
BfuI GTATCC 2 cut(s) 1053, 1306
BisI GCNGC 1 cut(s) 1221
BlsI GCNGC 1 cut(s) 1222
Bme1390I CCNGG 6 cut(s) 143, 299, 300, 836, 882, 1205
Bme18I GGWCC 5 cut(s) 274, 327, 664, 1201, 1249
BmeT110I CYCGRG 2 cut(s) 298, 512
BmgT120I GGNCC 8 cut(s) 274, 301, 302, 327, 664, 818, 1201, 1249
BmiI GGNNCC 6 cut(s) 303, 304, 666, 768, 1250, 1251
BmrFI CCNGG 6 cut(s) 143, 299, 300, 836, 882, 1205
BmrI ACTGGG 1 cut(s) 1326
BmsI GCATC 5 cut(s) 400, 610, 922, 1116, 1380
BmuI ACTGGG 1 cut(s) 1326
BpiI GAAGAC 1 cut(s) 354
Bpu10I CCTNAGC 2 cut(s) 645, 945
BpuEI CTTGAG 2 cut(s) 263, 296
BpuMI CCSGG 2 cut(s) 299, 300
BsaHI GRCGYC 1 cut(s) 423
BsaI GGTCTC 1 cut(s) 848
BsaJI CCNNGG 5 cut(s) 298, 513, 729, 881, 1030
BsaWI WCCGGW 1 cut(s) 329
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 1 cut(s) 841
Bse1I ACTGG 3 cut(s) 244, 1068, 1321
Bse3DI GCAATG 3 cut(s) 639, 718, 969
BseBI CCWGG 4 cut(s) 143, 836, 882, 1205
BseDI CCNNGG 5 cut(s) 298, 513, 729, 881, 1030
BseGI GGATG 1 cut(s) 745
BseLI CCNNNNNNNGG 1 cut(s) 841
BseMI GCAATG 3 cut(s) 639, 718, 969
BseMII CTCAG 2 cut(s) 936, 1164
BseNI ACTGG 3 cut(s) 244, 1068, 1321
BseSI GKGCMC 2 cut(s) 305, 783
BseXI GCAGC 1 cut(s) 1207
BseYI CCCAGC 2 cut(s) 255, 1157
Bsh1236I CGCG 1 cut(s) 101
Bsh1285I CGRYCG 1 cut(s) 334
BshFI GGCC 5 cut(s) 197, 303, 464, 661, 820
BsiEI CGRYCG 1 cut(s) 334
BsiHKCI CYCGRG 2 cut(s) 298, 512
BsiSI CCGG 3 cut(s) 299, 330, 662
BslFI GGGAC 3 cut(s) 434, 1262, 1343
BslI CCNNNNNNNGG 1 cut(s) 841
BsmAI GTCTC 2 cut(s) 215, 848
BsmFI GGGAC 3 cut(s) 434, 1262, 1343
BsnI GGCC 5 cut(s) 197, 303, 464, 661, 820
Bso31I GGTCTC 1 cut(s) 848
BsoBI CYCGRG 2 cut(s) 298, 512
Bsp120I GGGCCC 1 cut(s) 301
Bsp1286I GDGCHC 2 cut(s) 305, 783
Bsp143I GATC 4 cut(s) 382, 541, 654, 766
Bsp19I CCATGG 1 cut(s) 1030
BspACI CCGC 3 cut(s) 99, 306, 783
BspANI GGCC 5 cut(s) 197, 303, 464, 661, 820
BspCNI CTCAG 2 cut(s) 937, 1165
BspFNI CGCG 1 cut(s) 101
BspLI GGNNCC 6 cut(s) 303, 304, 666, 768, 1250, 1251
BspMAI CTGCAG 1 cut(s) 1225
BspPI GGATC 3 cut(s) 549, 761, 774
BspTNI GGTCTC 1 cut(s) 848
BsrDI GCAATG 3 cut(s) 639, 718, 969
BsrI ACTGG 3 cut(s) 244, 1068, 1321
BssECI CCNNGG 5 cut(s) 298, 513, 729, 881, 1030
BssMI GATC 4 cut(s) 382, 541, 654, 766
BssNI GRCGYC 1 cut(s) 423
BssT1I CCWWGG 2 cut(s) 729, 1030
Bst2UI CCWGG 4 cut(s) 143, 836, 882, 1205
Bst4CI ACNGT 4 cut(s) 23, 209, 616, 1298
Bst6I CTCTTC 1 cut(s) 264
BstACI GRCGYC 1 cut(s) 423
BstAPI GCANNNNNTGC 1 cut(s) 399
BstC8I GCNNGC 4 cut(s) 444, 783, 903, 983
BstDEI CTNAG 6 cut(s) 645, 867, 945, 1173, 1394, 1500
BstDSI CCRYGG 1 cut(s) 1030
BstF5I GGATG 1 cut(s) 745
BstFNI CGCG 1 cut(s) 101
BstH2I RGCGCY 1 cut(s) 842
BstHHI GCGC 2 cut(s) 841, 907
BstKTI GATC 4 cut(s) 385, 544, 657, 769
BstMAI GTCTC 2 cut(s) 215, 848
BstMBI GATC 4 cut(s) 382, 541, 654, 766
BstMCI CGRYCG 1 cut(s) 334
BstMWI GCNNNNNNNGC 6 cut(s) 194, 399, 470, 817, 941, 978
BstNI CCWGG 4 cut(s) 143, 836, 882, 1205
BstNSI RCATGY 3 cut(s) 1117, 1236, 1471
BstSCI CCNGG 6 cut(s) 141, 297, 298, 834, 880, 1203
BstSFI CTRYAG 2 cut(s) 558, 1221
BstSLI GKGCMC 2 cut(s) 305, 783
BstUI CGCG 1 cut(s) 101
BstV1I GCAGC 1 cut(s) 1207
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 1 cut(s) 766
BstXI CCANNNNNNTGG 3 cut(s) 366, 688, 736
BstYI RGATCY 1 cut(s) 766
BsuI GTATCC 2 cut(s) 1053, 1306
BsuRI GGCC 5 cut(s) 197, 303, 464, 661, 820
BtgI CCRYGG 1 cut(s) 1030
BtgZI GCGATG 2 cut(s) 488, 945
BtsCI GGATG 1 cut(s) 745
BtsI GCAGTG 1 cut(s) 1024
BtsIMutI CAGTG 3 cut(s) 205, 237, 1024
Cac8I GCNNGC 4 cut(s) 444, 783, 903, 983
CaiI CAGNNNCTG 2 cut(s) 841, 1367
CfoI GCGC 2 cut(s) 841, 907
Cfr13I GGNCC 8 cut(s) 274, 301, 302, 327, 664, 818, 1201, 1249
Cfr9I CCCGGG 1 cut(s) 298
CseI GACGC 1 cut(s) 431
CviAII CATG 6 cut(s) 415, 605, 1031, 1114, 1233, 1468
DdeI CTNAG 6 cut(s) 645, 867, 945, 1173, 1394, 1500
DpnI GATC 4 cut(s) 384, 543, 656, 768
DpnII GATC 4 cut(s) 382, 541, 654, 766
DrdI GACNNNNNNGTC 1 cut(s) 1073
DseDI GACNNNNNNGTC 1 cut(s) 1073
EaeI YGGCCR 2 cut(s) 195, 462
Eam1104I CTCTTC 1 cut(s) 264
EarI CTCTTC 1 cut(s) 264
Eco130I CCWWGG 2 cut(s) 729, 1030
Eco24I GRGCYC 1 cut(s) 305
Eco31I GGTCTC 1 cut(s) 848
Eco47I GGWCC 5 cut(s) 274, 327, 664, 1201, 1249
Eco88I CYCGRG 2 cut(s) 298, 512
EcoO109I RGGNCCY 3 cut(s) 274, 302, 1249
EcoRI GAATTC 2 cut(s) 577, 1096
EcoRII CCWGG 4 cut(s) 141, 834, 880, 1203
EcoT14I CCWWGG 2 cut(s) 729, 1030
EcoT38I GRGCYC 1 cut(s) 305
ErhI CCWWGG 2 cut(s) 729, 1030
FaeI CATG 6 cut(s) 418, 608, 1034, 1117, 1236, 1471
FalI AAGNNNNNCTT 6 cut(s) 386, 418, 1402, 1434, 1428, 1460
FaqI GGGAC 3 cut(s) 434, 1262, 1343
FatI CATG 6 cut(s) 414, 604, 1030, 1113, 1232, 1467
FauI CCCGC 3 cut(s) 106, 313, 790
FblI GTMKAC 2 cut(s) 601, 1077
Fnu4HI GCNGC 1 cut(s) 1221
FokI GGATG 1 cut(s) 752
FriOI GRGCYC 1 cut(s) 305
Fsp4HI GCNGC 1 cut(s) 1221
FspBI CTAG 2 cut(s) 936, 1334
GlaI GCGC 2 cut(s) 840, 906
GluI GCNGC 1 cut(s) 1221
GsaI CCCAGC 2 cut(s) 259, 1161
HaeII RGCGCY 1 cut(s) 842
HaeIII GGCC 5 cut(s) 197, 303, 464, 661, 820
HapII CCGG 3 cut(s) 299, 330, 662
HgaI GACGC 1 cut(s) 431
HhaI GCGC 2 cut(s) 841, 907
Hin1I GRCGYC 1 cut(s) 423
Hin1II CATG 6 cut(s) 418, 608, 1034, 1117, 1236, 1471
Hin6I GCGC 2 cut(s) 839, 905
HinP1I GCGC 2 cut(s) 839, 905
HincII GTYRAC 1 cut(s) 231
HindII GTYRAC 1 cut(s) 231
HinfI GANTC 6 cut(s) 370, 751, 791, 829, 1356, 1401
HpaII CCGG 3 cut(s) 299, 330, 662
HphI GGTGA 1 cut(s) 760
Hpy166II GTNNAC 4 cut(s) 231, 602, 1078, 1170
Hpy188I TCNGA 6 cut(s) 121, 756, 1095, 1303, 1350, 1474
Hpy188III TCNNGA 5 cut(s) 512, 922, 1199, 1228, 1273
Hpy8I GTNNAC 4 cut(s) 231, 602, 1078, 1170
Hpy99I CGWCG 1 cut(s) 221
HpyAV CCTTC 3 cut(s) 48, 304, 701
HpyCH4III ACNGT 4 cut(s) 23, 209, 616, 1298
HpyCH4IV ACGT 2 cut(s) 227, 264
HpyCH4V TGCA 6 cut(s) 188, 593, 985, 1024, 1223, 1379
HpyF10VI GCNNNNNNNGC 6 cut(s) 194, 399, 470, 817, 941, 978
HpyF3I CTNAG 6 cut(s) 645, 867, 945, 1173, 1394, 1500
HpySE526I ACGT 2 cut(s) 227, 264
Hsp92I GRCGYC 1 cut(s) 423
Hsp92II CATG 6 cut(s) 418, 608, 1034, 1117, 1236, 1471
HspAI GCGC 2 cut(s) 839, 905
KflI GGGWCCC 1 cut(s) 1249
Kzo9I GATC 4 cut(s) 382, 541, 654, 766
LmnI GCTCC 1 cut(s) 941
Lsp1109I GCAGC 1 cut(s) 1207
LweI GCATC 5 cut(s) 400, 610, 922, 1116, 1380
MaeI CTAG 2 cut(s) 936, 1334
MaeII ACGT 2 cut(s) 227, 264
MaeIII GTNAC 3 cut(s) 250, 450, 1146
MalI GATC 4 cut(s) 384, 543, 656, 768
MboI GATC 4 cut(s) 382, 541, 654, 766
MboII GAAGA 6 cut(s) 115, 233, 281, 359, 1407, 1410
MfeI CAATTG 1 cut(s) 189
MflI RGATCY 1 cut(s) 766
MhlI GDGCHC 2 cut(s) 305, 783
MlsI TGGCCA 1 cut(s) 464
MluCI AATT 9 cut(s) 189, 397, 577, 594, 1006, 1096, 1210, 1291, 1321
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 2 cut(s) 760, 1365
MmeI TCCRAC 3 cut(s) 144, 669, 794
Mox20I TGGCCA 1 cut(s) 464
MroXI GAANNNNTTC 1 cut(s) 401
MscI TGGCCA 1 cut(s) 464
MseI TTAA 6 cut(s) 813, 1044, 1122, 1134, 1182, 1409
MslI CAYNNNNRTG 1 cut(s) 1029
Msp20I TGGCCA 1 cut(s) 464
MspI CCGG 3 cut(s) 299, 330, 662
MspR9I CCNGG 6 cut(s) 143, 299, 300, 836, 882, 1205
MunI CAATTG 1 cut(s) 189
MvaI CCWGG 4 cut(s) 143, 836, 882, 1205
MvnI CGCG 1 cut(s) 101
MwoI GCNNNNNNNGC 6 cut(s) 194, 399, 470, 817, 941, 978
NciI CCSGG 2 cut(s) 299, 300
NcoI CCATGG 1 cut(s) 1030
NdeII GATC 4 cut(s) 382, 541, 654, 766
NlaIII CATG 6 cut(s) 418, 608, 1034, 1117, 1236, 1471
NlaIV GGNNCC 6 cut(s) 303, 304, 666, 768, 1250, 1251
NmuCI GTSAC 1 cut(s) 250
NspI RCATGY 3 cut(s) 1117, 1236, 1471
PciI ACATGT 2 cut(s) 1113, 1467
PdmI GAANNNNTTC 1 cut(s) 401
PfeI GAWTC 4 cut(s) 370, 791, 829, 1401
PflMI CCANNNNNTGG 1 cut(s) 841
PkrI GCNGC 1 cut(s) 1222
PleI GAGTC 2 cut(s) 759, 1364
PpsI GAGTC 2 cut(s) 759, 1364
PpuMI RGGWCCY 2 cut(s) 274, 1249
PscI ACATGT 2 cut(s) 1113, 1467
PshBI ATTAAT 1 cut(s) 1044
Psp1406I AACGTT 1 cut(s) 227
Psp5II RGGWCCY 2 cut(s) 274, 1249
Psp6I CCWGG 4 cut(s) 141, 834, 880, 1203
PspFI CCCAGC 2 cut(s) 255, 1157
PspGI CCWGG 4 cut(s) 141, 834, 880, 1203
PspN4I GGNNCC 6 cut(s) 303, 304, 666, 768, 1250, 1251
PspOMI GGGCCC 1 cut(s) 301
PspPI GGNCC 8 cut(s) 274, 301, 302, 327, 664, 818, 1201, 1249
PspPPI RGGWCCY 2 cut(s) 274, 1249
PstI CTGCAG 1 cut(s) 1225
PstNI CAGNNNCTG 2 cut(s) 841, 1367
PsuI RGATCY 1 cut(s) 766
RseI CAYNNNNRTG 1 cut(s) 1029
SaqAI TTAA 6 cut(s) 813, 1044, 1122, 1134, 1182, 1409
SatI GCNGC 1 cut(s) 1221
Sau3AI GATC 4 cut(s) 382, 541, 654, 766
Sau96I GGNCC 8 cut(s) 274, 301, 302, 327, 664, 818, 1201, 1249
SchI GAGTC 2 cut(s) 760, 1365
ScrFI CCNGG 6 cut(s) 143, 299, 300, 836, 882, 1205
SduI GDGCHC 2 cut(s) 305, 783
SfaNI GCATC 5 cut(s) 400, 610, 922, 1116, 1380
SfcI CTRYAG 2 cut(s) 558, 1221
SinI GGWCC 5 cut(s) 274, 327, 664, 1201, 1249
SmaI CCCGGG 1 cut(s) 300
SmiMI CAYNNNNRTG 1 cut(s) 1029
SmlI CTYRAG 2 cut(s) 278, 311
SmoI CTYRAG 2 cut(s) 278, 311
Sse9I AATT 9 cut(s) 189, 397, 577, 594, 1006, 1096, 1210, 1291, 1321
SsiI CCGC 3 cut(s) 99, 306, 783
SspI AATATT 1 cut(s) 1042
SspMI CTAG 2 cut(s) 936, 1334
StyD4I CCNGG 6 cut(s) 141, 297, 298, 834, 880, 1203
StyI CCWWGG 2 cut(s) 729, 1030
TaaI ACNGT 4 cut(s) 23, 209, 616, 1298
TaiI ACGT 2 cut(s) 230, 267
TaqI TCGA 4 cut(s) 52, 219, 247, 1493
TaqII GACCGA 1 cut(s) 248
TasI AATT 9 cut(s) 189, 397, 577, 594, 1006, 1096, 1210, 1291, 1321
TfiI GAWTC 4 cut(s) 370, 791, 829, 1401
Tru1I TTAA 6 cut(s) 813, 1044, 1122, 1134, 1182, 1409
Tru9I TTAA 6 cut(s) 813, 1044, 1122, 1134, 1182, 1409
TscAI CASTG 3 cut(s) 212, 244, 1031
TseFI GTSAC 1 cut(s) 250
TseI GCWGC 1 cut(s) 1220
Tsp45I GTSAC 1 cut(s) 250
TspDTI ATGAA 3 cut(s) 360, 452, 1491
TspGWI ACGGA 1 cut(s) 205
TspMI CCCGGG 1 cut(s) 298
TspRI CASTG 3 cut(s) 212, 244, 1031
Van91I CCANNNNNTGG 1 cut(s) 841
VpaK11BI GGWCC 5 cut(s) 274, 327, 664, 1201, 1249
VspI ATTAAT 1 cut(s) 1044
XapI RAATTY 3 cut(s) 577, 1096, 1321
XceI RCATGY 3 cut(s) 1117, 1236, 1471
XmaI CCCGGG 1 cut(s) 298
XmiI GTMKAC 2 cut(s) 601, 1077
XmnI GAANNNNTTC 1 cut(s) 401
XspI CTAG 2 cut(s) 936, 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.