Rh3BG346200

Pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0014786
Physical Location & Seq
Reverse (-)
37832303 .. 37834957
2655 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG346200.1

Sequence Viewer

Length: 1491 bp
ATGAGCAGAACAAAGCGACACCGTGATTACCCACCTGCTTCCTCTCCTTGTCGAAACCCTAATAAACCCGAACCGGCGAAGAAACACCAGCAATCCGACCCTACCTTTCCCTCATACCTGGACACTCCCAATCCCTTACCTCCCAAAATCAAGCTGCTGTGTGCAATTGTGGCCGAAATCCACTGTCACTCGGTCGAAGAAACGTTGAACGACACTGGTATTCGAGTGACCCAGCAAGACGTGGAAGAGGTCCTCAAGCTCTCCTACGCCTTCCCGGGCCCTGCCCTCAAGTTCTTTCGGTGGTCCGGTCTTCAGCTCAATGAAGACCACAGCCCATATTCGTGGAATCTGGTTGTTGATCTCTTGGGCAAGAATTGCTTCTTTGATGCCATGTGGGACGCCATCAAGTCTATGAAGCAAGAAAGGTTACTCTCTTTGGCCACTTTTGCTTCTGTTTTTAGTAGTTACGTAGTTGCCCATCGCACTCCCGAGGCTCTTGTGACATTTGAGGTTATGGACCAATATGGTGTTCCTACAGATATTGTAGCATTGAATTCTCTTTTGAGTGCAATTTGTAGAGATGGCAAGACGGCCGATGCCCTTGATTTTTACTACATTGCTAAGGACAAGATCAGGCCGGACCCTGATACTTACGCCATCTTGTTGGAGGGGTGGGAGAGTGAAGGGAATGTAGCCTCGGCTACCAAGGTTTTGGATGAGATGGTGAGTCAGATTGGTTGGGATCCAACCAATGTGCCCGCCTACGATTCATATCTGAACACTTTGCTTAACGGGCCTAATGGGATTCGCGAGGCGCTGGACTTCTTTGAGACCTTGAAAGCTAAGAGGTGTTATCCAGGGGTCAAGTTTTTCAGGCTTGCGCTTGATGAGTGTGTCAAGAAAGGCGATGCTAGGGGAGCTGAGGCTCTTTGGGAGGCAATGGTAGGCAGACTTGGTTTGCAACCTGACACCAATATGTATAATTTGATGATTTCTTTGCATTGCCATGGAAACAATATTAATGTAGCAAAAAGGATGCTGGATGAGATGGTCTACAATGGGGCATTTCCAAATTCGCAAACATATAACATGTTGTTTAAGATGCTCATTAAGAATAGGAAGTTACAGGAGGCTGCCGTTTTGTTTACTGAGATGATTAAAAATGAGTGTGTTCTGGACCAGGATAATTGTATTGCTGCAGTCAGGATATACTTGGATTTGGGGGACCCTTATTTTGCAATAAAAGTCTGGAAGTTTATGATAGAAAATTACCGTTCTGGCTTGGAGGATACTGGTAATTTGTTGGTTCTAGGACTTCGCAATCTGAACAGAGTCCCAGAAGCAGTCAAGTATGCAGAGGATATGATGCTAAGAGGAATCAAGTTGAGTTCTTCTTCAATGTCAAAACTCAAAGACAGCCTTGTCCAAGCAAAGAAGCAATACATGTATGATGAACTTTTGAGAAAGTCGAAAGCTCAGCAGCTAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

496

Amino Acids

56.16

Weight (kDa)

6.29

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 317 - 370 7.2e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 322 - 370 1.3e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014786)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g03480
malus_domestica MD09G1262300.v1.1
prunus_persica Prupe.3G160100_v2.0.a1
pyrus_communis pycom09g17670
rosa_chinensis RchiOBHm_Chr3g0493431
rosa_laevigata RLG00000022714
rosa_multiflora Rmu_co8321897.1_g000001 Rmu_sc0003935.1_g000001 Rmu_sc0019660.1_g000001
rosa_roxburghii Rroxscaffold_6G00391590
rosa_rugosa Rorug03G0261000
rosa_samantha Rh3AG310100 Rh3BG346200 Rh3CG343800 Rh3DG345200
rosa_wichuraiana Rw0G011150 Rw3G027240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 43
AasI GACNNNNNNGTC 1 cut(s) 1421
Acc36I ACCTGC 1 cut(s) 43
AccI GTMKAC 1 cut(s) 1053
AccII CGCG 1 cut(s) 810
AciI CCGC 1 cut(s) 759
AclI AACGTT 1 cut(s) 203
AclWI GGATC 2 cut(s) 737, 750
AcoI YGGCCR 3 cut(s) 171, 438, 591
AcsI RAATTY 2 cut(s) 553, 1072
AcuI CTGAAG 1 cut(s) 296
AcyI GRCGYC 1 cut(s) 399
AflIII ACRYGT 2 cut(s) 1089, 1443
AgsI TTSAA 4 cut(s) 208, 553, 838, 1398
AjiI CACGTC 1 cut(s) 241
AjnI CCWGG 3 cut(s) 117, 856, 1179
AjuI GAANNNNNNNTTGG 2 cut(s) 513, 545
AluBI AGCT 7 cut(s) 154, 259, 316, 842, 920, 1475, 1483
AluI AGCT 7 cut(s) 154, 259, 316, 842, 920, 1475, 1483
Alw26I GTCTC 1 cut(s) 824
AlwI GGATC 2 cut(s) 737, 750
Ama87I CYCGRG 2 cut(s) 274, 488
AoxI GGCC 6 cut(s) 171, 277, 438, 591, 635, 794
ApaI GGGCCC 1 cut(s) 281
ApeKI GCWGC 4 cut(s) 154, 1133, 1196, 1480
ApoI RAATTY 2 cut(s) 553, 1072
ArsI GACNNNNNNTTYG 2 cut(s) 1217, 1249
AseI ATTAAT 1 cut(s) 1020
Asp700I GAANNNNTTC 1 cut(s) 377
AspLEI GCGC 2 cut(s) 817, 883
AspS9I GGNCC 9 cut(s) 250, 277, 278, 303, 517, 640, 794, 1177, 1225
AsuC2I CCSGG 2 cut(s) 275, 276
AsuHPI GGTGA 1 cut(s) 736
AvaI CYCGRG 2 cut(s) 274, 488
AvaII GGWCC 6 cut(s) 250, 303, 517, 640, 1177, 1225
BaeGI GKGCMC 2 cut(s) 281, 759
BalI TGGCCA 1 cut(s) 440
BamHI GGATCC 1 cut(s) 742
BanII GRGCYC 1 cut(s) 281
BbsI GAAGAC 2 cut(s) 302, 330
BbvCI CCTCAGC 1 cut(s) 921
BbvI GCAGC 3 cut(s) 141, 1120, 1183
BccI CCATC 6 cut(s) 410, 486, 575, 665, 715, 1042
BceAI ACGGC 2 cut(s) 606, 1121
BciT130I CCWGG 3 cut(s) 119, 858, 1181
BciVI GTATCC 1 cut(s) 1282
BcnI CCSGG 2 cut(s) 275, 276
BcoDI GTCTC 1 cut(s) 824
BfaI CTAG 3 cut(s) 912, 1310, 1484
BfmI CTRYAG 2 cut(s) 534, 1197
BfoI RGCGCY 1 cut(s) 818
BfuAI ACCTGC 1 cut(s) 43
BfuI GTATCC 1 cut(s) 1282
BisI GCNGC 4 cut(s) 155, 1134, 1197, 1481
BlpI GCTNAGC 1 cut(s) 1476
BlsI GCNGC 4 cut(s) 156, 1135, 1198, 1482
Bme1390I CCNGG 5 cut(s) 119, 275, 276, 858, 1181
Bme18I GGWCC 6 cut(s) 250, 303, 517, 640, 1177, 1225
BmeT110I CYCGRG 2 cut(s) 274, 488
BmgBI CACGTC 1 cut(s) 241
BmgT120I GGNCC 9 cut(s) 250, 277, 278, 303, 517, 640, 794, 1177, 1225
BmiI GGNNCC 5 cut(s) 279, 642, 744, 1226, 1227
BmrFI CCNGG 5 cut(s) 119, 275, 276, 858, 1181
BmsI GCATC 6 cut(s) 376, 586, 898, 1026, 1092, 1356
BpiI GAAGAC 2 cut(s) 302, 330
Bpu10I CCTNAGC 2 cut(s) 621, 921
Bpu1102I GCTNAGC 1 cut(s) 1476
BpuEI CTTGAG 2 cut(s) 239, 272
BpuMI CCSGG 2 cut(s) 275, 276
BsaAI YACGTR 1 cut(s) 469
BsaBI GATNNNNATC 1 cut(s) 771
BsaHI GRCGYC 1 cut(s) 399
BsaI GGTCTC 1 cut(s) 824
BsaJI CCNNGG 6 cut(s) 274, 489, 696, 705, 857, 1006
BsaWI WCCGGW 1 cut(s) 305
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 2 cut(s) 220, 1297
Bse3DI GCAATG 3 cut(s) 615, 945, 1000
Bse8I GATNNNNATC 1 cut(s) 771
BseBI CCWGG 3 cut(s) 119, 858, 1181
BseDI CCNNGG 6 cut(s) 274, 489, 696, 705, 857, 1006
BseGI GGATG 3 cut(s) 721, 1041, 1048
BseJI GATNNNNATC 1 cut(s) 771
BseMI GCAATG 3 cut(s) 615, 945, 1000
BseMII CTCAG 3 cut(s) 912, 1140, 1490
BseNI ACTGG 2 cut(s) 220, 1297
BseSI GKGCMC 2 cut(s) 281, 759
BseX3I CGGCCG 1 cut(s) 591
BseXI GCAGC 3 cut(s) 141, 1120, 1183
BseYI CCCAGC 1 cut(s) 231
Bsh1236I CGCG 1 cut(s) 810
Bsh1285I CGRYCG 2 cut(s) 195, 594
BshFI GGCC 6 cut(s) 173, 279, 440, 593, 637, 796
BsiEI CGRYCG 2 cut(s) 195, 594
BsiHKCI CYCGRG 2 cut(s) 274, 488
BsiSI CCGG 4 cut(s) 74, 275, 306, 638
BslFI GGGAC 3 cut(s) 410, 1238, 1319
BsmAI GTCTC 1 cut(s) 824
BsmFI GGGAC 3 cut(s) 410, 1238, 1319
BsnI GGCC 6 cut(s) 173, 279, 440, 593, 637, 796
Bso31I GGTCTC 1 cut(s) 824
BsoBI CYCGRG 2 cut(s) 274, 488
Bsp120I GGGCCC 1 cut(s) 277
Bsp1286I GDGCHC 2 cut(s) 281, 759
Bsp143I GATC 3 cut(s) 358, 630, 742
Bsp1720I GCTNAGC 1 cut(s) 1476
Bsp19I CCATGG 1 cut(s) 1006
Bsp68I TCGCGA 1 cut(s) 810
BspACI CCGC 1 cut(s) 759
BspANI GGCC 6 cut(s) 173, 279, 440, 593, 637, 796
BspCNI CTCAG 3 cut(s) 913, 1141, 1489
BspFNI CGCG 1 cut(s) 810
BspLI GGNNCC 5 cut(s) 279, 642, 744, 1226, 1227
BspMAI CTGCAG 1 cut(s) 1201
BspMI ACCTGC 1 cut(s) 43
BspPI GGATC 2 cut(s) 737, 750
BspTNI GGTCTC 1 cut(s) 824
BsrDI GCAATG 3 cut(s) 615, 945, 1000
BsrFI RCCGGY 1 cut(s) 73
BsrI ACTGG 2 cut(s) 220, 1297
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 6 cut(s) 274, 489, 696, 705, 857, 1006
BssMI GATC 3 cut(s) 358, 630, 742
BssNI GRCGYC 1 cut(s) 399
BssT1I CCWWGG 2 cut(s) 705, 1006
Bst2UI CCWGG 3 cut(s) 119, 858, 1181
Bst4CI ACNGT 3 cut(s) 23, 185, 1274
Bst6I CTCTTC 1 cut(s) 240
BstACI GRCGYC 1 cut(s) 399
BstAPI GCANNNNNTGC 1 cut(s) 375
BstBAI YACGTR 1 cut(s) 469
BstC8I GCNNGC 2 cut(s) 759, 879
BstDEI CTNAG 6 cut(s) 621, 843, 921, 1149, 1370, 1476
BstDSI CCRYGG 1 cut(s) 1006
BstF5I GGATG 3 cut(s) 721, 1041, 1048
BstFNI CGCG 1 cut(s) 810
BstH2I RGCGCY 1 cut(s) 818
BstHHI GCGC 2 cut(s) 817, 883
BstKTI GATC 3 cut(s) 361, 633, 745
BstMAI GTCTC 1 cut(s) 824
BstMBI GATC 3 cut(s) 358, 630, 742
BstMCI CGRYCG 2 cut(s) 195, 594
BstMWI GCNNNNNNNGC 5 cut(s) 170, 375, 446, 793, 917
BstNI CCWGG 3 cut(s) 119, 858, 1181
BstNSI RCATGY 2 cut(s) 1093, 1447
BstSCI CCNGG 5 cut(s) 117, 273, 274, 856, 1179
BstSFI CTRYAG 2 cut(s) 534, 1197
BstSLI GKGCMC 2 cut(s) 281, 759
BstSNI TACGTA 1 cut(s) 469
BstUI CGCG 1 cut(s) 810
BstV1I GCAGC 3 cut(s) 141, 1120, 1183
BstV2I GAAGAC 2 cut(s) 302, 330
BstX2I RGATCY 1 cut(s) 742
BstXI CCANNNNNNTGG 3 cut(s) 342, 664, 712
BstYI RGATCY 1 cut(s) 742
BstZI CGGCCG 1 cut(s) 591
BsuI GTATCC 1 cut(s) 1282
BsuRI GGCC 6 cut(s) 173, 279, 440, 593, 637, 796
BtgI CCRYGG 1 cut(s) 1006
BtgZI GCGATG 2 cut(s) 464, 921
BtrI CACGTC 1 cut(s) 241
BtsCI GGATG 3 cut(s) 721, 1041, 1048
BtsIMutI CAGTG 2 cut(s) 181, 213
BtuMI TCGCGA 1 cut(s) 810
BveI ACCTGC 1 cut(s) 43
Cac8I GCNNGC 2 cut(s) 759, 879
CfoI GCGC 2 cut(s) 817, 883
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 9 cut(s) 250, 277, 278, 303, 517, 640, 794, 1177, 1225
Cfr9I CCCGGG 1 cut(s) 274
CseI GACGC 1 cut(s) 407
CviAII CATG 4 cut(s) 391, 1007, 1090, 1444
DdeI CTNAG 6 cut(s) 621, 843, 921, 1149, 1370, 1476
DpnI GATC 3 cut(s) 360, 632, 744
DpnII GATC 3 cut(s) 358, 630, 742
DrdI GACNNNNNNGTC 1 cut(s) 1421
DseDI GACNNNNNNGTC 1 cut(s) 1421
EaeI YGGCCR 3 cut(s) 171, 438, 591
EagI CGGCCG 1 cut(s) 591
Eam1104I CTCTTC 1 cut(s) 240
EarI CTCTTC 1 cut(s) 240
EclXI CGGCCG 1 cut(s) 591
Eco105I TACGTA 1 cut(s) 469
Eco130I CCWWGG 2 cut(s) 705, 1006
Eco24I GRGCYC 1 cut(s) 281
Eco31I GGTCTC 1 cut(s) 824
Eco47I GGWCC 6 cut(s) 250, 303, 517, 640, 1177, 1225
Eco52I CGGCCG 1 cut(s) 591
Eco57I CTGAAG 1 cut(s) 296
Eco88I CYCGRG 2 cut(s) 274, 488
EcoO109I RGGNCCY 3 cut(s) 250, 278, 1225
EcoRI GAATTC 1 cut(s) 553
EcoRII CCWGG 3 cut(s) 117, 856, 1179
EcoT14I CCWWGG 2 cut(s) 705, 1006
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 2 cut(s) 705, 1006
FaeI CATG 4 cut(s) 394, 1010, 1093, 1447
FalI AAGNNNNNCTT 4 cut(s) 362, 394, 1404, 1436
FaqI GGGAC 3 cut(s) 410, 1238, 1319
FatI CATG 4 cut(s) 390, 1006, 1089, 1443
FauI CCCGC 1 cut(s) 766
FblI GTMKAC 1 cut(s) 1053
Fnu4HI GCNGC 4 cut(s) 155, 1134, 1197, 1481
FokI GGATG 3 cut(s) 728, 1048, 1055
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 4 cut(s) 155, 1134, 1197, 1481
FspBI CTAG 3 cut(s) 912, 1310, 1484
GlaI GCGC 2 cut(s) 816, 882
GluI GCNGC 4 cut(s) 155, 1134, 1197, 1481
GsaI CCCAGC 1 cut(s) 235
HaeII RGCGCY 1 cut(s) 818
HaeIII GGCC 6 cut(s) 173, 279, 440, 593, 637, 796
HapII CCGG 4 cut(s) 74, 275, 306, 638
HgaI GACGC 1 cut(s) 407
HhaI GCGC 2 cut(s) 817, 883
Hin1I GRCGYC 1 cut(s) 399
Hin1II CATG 4 cut(s) 394, 1010, 1093, 1447
Hin6I GCGC 2 cut(s) 815, 881
HinP1I GCGC 2 cut(s) 815, 881
HinfI GANTC 6 cut(s) 346, 727, 767, 805, 1332, 1377
HpaII CCGG 4 cut(s) 74, 275, 306, 638
HphI GGTGA 1 cut(s) 736
Hpy166II GTNNAC 2 cut(s) 1054, 1146
Hpy188I TCNGA 4 cut(s) 97, 732, 777, 1326
Hpy188III TCNNGA 6 cut(s) 488, 809, 898, 1175, 1204, 1249
Hpy8I GTNNAC 2 cut(s) 1054, 1146
HpyAV CCTTC 2 cut(s) 280, 677
HpyCH4III ACNGT 3 cut(s) 23, 185, 1274
HpyCH4IV ACGT 3 cut(s) 203, 240, 468
HpyCH4V TGCA 7 cut(s) 164, 569, 961, 1000, 1199, 1238, 1355
HpyF10VI GCNNNNNNNGC 5 cut(s) 170, 375, 446, 793, 917
HpyF3I CTNAG 6 cut(s) 621, 843, 921, 1149, 1370, 1476
HpySE526I ACGT 3 cut(s) 203, 240, 468
Hsp92I GRCGYC 1 cut(s) 399
Hsp92II CATG 4 cut(s) 394, 1010, 1093, 1447
HspAI GCGC 2 cut(s) 815, 881
KflI GGGWCCC 1 cut(s) 1225
Kzo9I GATC 3 cut(s) 358, 630, 742
LmnI GCTCC 1 cut(s) 917
Lsp1109I GCAGC 3 cut(s) 141, 1120, 1183
LweI GCATC 6 cut(s) 376, 586, 898, 1026, 1092, 1356
MaeI CTAG 3 cut(s) 912, 1310, 1484
MaeII ACGT 3 cut(s) 203, 240, 468
MaeIII GTNAC 6 cut(s) 185, 226, 426, 464, 499, 1122
MalI GATC 3 cut(s) 360, 632, 744
MboI GATC 3 cut(s) 358, 630, 742
MboII GAAGA 7 cut(s) 91, 209, 257, 302, 335, 1383, 1386
MfeI CAATTG 1 cut(s) 165
MflI RGATCY 1 cut(s) 742
MhlI GDGCHC 2 cut(s) 281, 759
MlsI TGGCCA 1 cut(s) 440
MluCI AATT 9 cut(s) 165, 373, 553, 570, 982, 1072, 1186, 1267, 1297
MluNI TGGCCA 1 cut(s) 440
MlyI GAGTC 2 cut(s) 736, 1341
MmeI TCCRAC 3 cut(s) 120, 645, 770
Mox20I TGGCCA 1 cut(s) 440
MroXI GAANNNNTTC 1 cut(s) 377
MscI TGGCCA 1 cut(s) 440
MseI TTAA 6 cut(s) 789, 1020, 1098, 1110, 1158, 1489
MslI CAYNNNNRTG 3 cut(s) 340, 974, 1005
Msp20I TGGCCA 1 cut(s) 440
MspI CCGG 4 cut(s) 74, 275, 306, 638
MspR9I CCNGG 5 cut(s) 119, 275, 276, 858, 1181
MunI CAATTG 1 cut(s) 165
MvaI CCWGG 3 cut(s) 119, 858, 1181
MvnI CGCG 1 cut(s) 810
MwoI GCNNNNNNNGC 5 cut(s) 170, 375, 446, 793, 917
NciI CCSGG 2 cut(s) 275, 276
NcoI CCATGG 1 cut(s) 1006
NdeII GATC 3 cut(s) 358, 630, 742
NlaIII CATG 4 cut(s) 394, 1010, 1093, 1447
NlaIV GGNNCC 5 cut(s) 279, 642, 744, 1226, 1227
NmeAIII GCCGAG 1 cut(s) 677
NmuCI GTSAC 3 cut(s) 185, 226, 499
NruI TCGCGA 1 cut(s) 810
NspI RCATGY 2 cut(s) 1093, 1447
PaqCI CACCTGC 1 cut(s) 43
PciI ACATGT 2 cut(s) 1089, 1443
PdmI GAANNNNTTC 1 cut(s) 377
PfeI GAWTC 4 cut(s) 346, 767, 805, 1377
PkrI GCNGC 4 cut(s) 156, 1135, 1198, 1482
PleI GAGTC 2 cut(s) 735, 1340
PpsI GAGTC 2 cut(s) 735, 1340
Ppu21I YACGTR 1 cut(s) 469
PpuMI RGGWCCY 2 cut(s) 250, 1225
PscI ACATGT 2 cut(s) 1089, 1443
PshBI ATTAAT 1 cut(s) 1020
Psp1406I AACGTT 1 cut(s) 203
Psp5II RGGWCCY 2 cut(s) 250, 1225
Psp6I CCWGG 3 cut(s) 117, 856, 1179
PspFI CCCAGC 1 cut(s) 231
PspGI CCWGG 3 cut(s) 117, 856, 1179
PspN4I GGNNCC 5 cut(s) 279, 642, 744, 1226, 1227
PspOMI GGGCCC 1 cut(s) 277
PspPI GGNCC 9 cut(s) 250, 277, 278, 303, 517, 640, 794, 1177, 1225
PspPPI RGGWCCY 2 cut(s) 250, 1225
PstI CTGCAG 1 cut(s) 1201
PsuI RGATCY 1 cut(s) 742
RruI TCGCGA 1 cut(s) 810
RseI CAYNNNNRTG 3 cut(s) 340, 974, 1005
SaqAI TTAA 6 cut(s) 789, 1020, 1098, 1110, 1158, 1489
SatI GCNGC 4 cut(s) 155, 1134, 1197, 1481
Sau3AI GATC 3 cut(s) 358, 630, 742
Sau96I GGNCC 9 cut(s) 250, 277, 278, 303, 517, 640, 794, 1177, 1225
SchI GAGTC 2 cut(s) 736, 1341
ScrFI CCNGG 5 cut(s) 119, 275, 276, 858, 1181
SduI GDGCHC 2 cut(s) 281, 759
SfaNI GCATC 6 cut(s) 376, 586, 898, 1026, 1092, 1356
SfcI CTRYAG 2 cut(s) 534, 1197
SinI GGWCC 6 cut(s) 250, 303, 517, 640, 1177, 1225
SmaI CCCGGG 1 cut(s) 276
SmiMI CAYNNNNRTG 3 cut(s) 340, 974, 1005
SmlI CTYRAG 2 cut(s) 254, 287
SmoI CTYRAG 2 cut(s) 254, 287
SnaBI TACGTA 1 cut(s) 469
Sse9I AATT 9 cut(s) 165, 373, 553, 570, 982, 1072, 1186, 1267, 1297
SsiI CCGC 1 cut(s) 759
SspI AATATT 1 cut(s) 1018
SspMI CTAG 3 cut(s) 912, 1310, 1484
StyD4I CCNGG 5 cut(s) 117, 273, 274, 856, 1179
StyI CCWWGG 2 cut(s) 705, 1006
TaaI ACNGT 3 cut(s) 23, 185, 1274
TaiI ACGT 3 cut(s) 206, 243, 471
TaqI TCGA 4 cut(s) 52, 195, 223, 1469
TaqII GACCGA 1 cut(s) 181
TasI AATT 9 cut(s) 165, 373, 553, 570, 982, 1072, 1186, 1267, 1297
TfiI GAWTC 4 cut(s) 346, 767, 805, 1377
Tru1I TTAA 6 cut(s) 789, 1020, 1098, 1110, 1158, 1489
Tru9I TTAA 6 cut(s) 789, 1020, 1098, 1110, 1158, 1489
TscAI CASTG 2 cut(s) 188, 220
TseFI GTSAC 3 cut(s) 185, 226, 499
TseI GCWGC 4 cut(s) 154, 1133, 1196, 1480
Tsp45I GTSAC 3 cut(s) 185, 226, 499
TspDTI ATGAA 4 cut(s) 336, 428, 759, 1467
TspMI CCCGGG 1 cut(s) 274
TspRI CASTG 2 cut(s) 188, 220
VpaK11BI GGWCC 6 cut(s) 250, 303, 517, 640, 1177, 1225
VspI ATTAAT 1 cut(s) 1020
XapI RAATTY 2 cut(s) 553, 1072
XceI RCATGY 2 cut(s) 1093, 1447
XmaI CCCGGG 1 cut(s) 274
XmiI GTMKAC 1 cut(s) 1053
XmnI GAANNNNTTC 1 cut(s) 377
XspI CTAG 3 cut(s) 912, 1310, 1484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.