Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0006842

Physical Location & Seq

Genomic Coordinates Forward (+)

5114545 .. 5122501

Gene Structure 7957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g04580.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGAGGGTGTTGTCTTCCATTACAAATGTGTATGCTGCTCGCTTGAAGCTGTTGTTCAGGAGGACAAGTACAACGAGACATTATCGCTGCGATAATTCCAGTCTTTGTTCCATATCTGGCTCAAGTAACCAGAGAGCATTTGATGATGATGTTGTAATGAAAAGAATCGTGTTAATACTCGCCAAGCGTCCGTGGAGTCTTGGTTGTCAAAATGGGTACAATATCTATCGGAATCAGTTCAATATGGTAGAGGTTTTGAACTATTTGTTTGAGGAGAGTTTGGATGCTAATCTTGCTCTCTACTTTTTCAAGTGGTCAGAATGTTGCAATGGATCAAAGCATATGGTTCAGGCTGCATGTCGGATGGTACATATATTGGTTTCCGGGAACATAAATCATAGAGCAGTGGACTTGGTTCGGCATCTTGTGAGAAATCATACTGAAGAGGAGACATGTAATTTGTTACTGGAAGTCCTTTATGGAACCCATAGTGAAACAAGGGTTTTAGAAACTGTGTGTAGCATGCTAGTGGATCAGTATATTAAGGAAGGCATGGTGAACATGGCTCTGAATGTAACATATGAAATGAAGGGCCAAAATATTTTCCCTTCTGGTGGTGTTTGCAACACTCTGCTACGAGCATTATTAGAATCAAACCAGTTAAATTTTGCATGGGATTTCTTGGAAGTTATGCAGACAAGAGGACTGGGTTTAAATTCTACCATCATAAGTCTCTTCATTCATAAGTTCTGTAGAGAGGGTGATCTGGGAAGTGGTTTCAAGTTGCTTGTTGATATGAAGAAGTATGGGATTCAGCCTGATGTTGTTTCGTATACAATCGTTATTGATTCTCTATGCAGAATGTCTTATTTGAAGGAAGCCACTACGTTATTGTTTAAGATGACTCAGTTGGGTATCTCTCCAGATTCGGTCTTGATTAGTTCAGTTATCCATGGCCACTGCCAGATGAGACAGTCAGCGGCTGCAGTAAAGATACTGAAGATCTTCCGTCCTCCCCTCAATATTTTTTTGTACAATAGCTTTATTTCAAAGTTATGTTCAGATGGCAACATGTTTGAAGCTTCTGGACTGTTTTTCGAGATGTGTGAGTTTGGCTTGCTCCCAGATTGTGTTTGTTATTCAACTATAATAGGAGGATACTGCAAAGCGAAAGACATTAATAGAGCTTTTCTGTATTTTGGGAAAATGCTAAAAAGTGGAATTACACCATCTGCTACCACATACACGTTGCTCATGGATGCTTACTGCAAGTCTGGAGATATAGAAATGGCGGAATATGTGTTCCAAGCAATGCTTTCAGAGGGTCTACTACCTGATATTGTCGCTTACAATACTTTAATGGATGGTTTCGGAAGGAAGGGACAGTTACGAAAGGTTTTTGGGGTTTTAGATAGGATAAATTCTTCTAATGTTTCCCCTGATGTTGTTACATATAACACTCTGATTCATAGTCTTGCCACAAGAGGATTTACCAATGAGGCAAAACAAATCATGATTGAGCTTATCATGAGGGGTTTCTCCCTGGATGTAGCAGCATTCACTAATGTTATAGATGGATTTTCAAAGAAGGGGAACTTTGAGGAAGCCTTTTTTGTGTGGTTCTGCATGAGTGAGCATGAGGTCAAACCAGATGTAGTGACATGCAGTGCTCTTCTCAATGGATACTGTAGGAAACACCAAATGGAACACGCCAATTTTTTATTTCGCAAGATGCTTGATATTGGATTACGTCCAGACCTGATACTGTATAACACTATGATTCATGGATTTTGTAGTGTTGGAAGCATTGATGATGCTTGCAACTTGATCTGTATGATGGTCGAAAACGGTATCCTTCCCAATAACATTACTCACCGGGCACTTGTCCTTGGGTTCGGTAAGAAGGGAGTTAGGAATCCTGCGTTAGTGGCAGCTCATAATTTGCAAGAAATTTGTTTCAGATACGGTATTCGTGCTGATTTTGAGGAATATATAAAACCAGAAAGCTGCACCCATTTTGGGCCATCTTTACCAAATCAGTCTGTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

684

Amino Acids

77.01

Weight (kDa)

7.46

Isoelectric Point (pI)

30.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	206 - 334	1.5e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	246 - 287	1e-11	PPR repeat family
PPR_1	PF12854	270 - 301	6.5e-08	PPR repeat
PPR_2	PF13041	274 - 322	1e-07	PPR repeat family
PPR_2	PF13041	341 - 386	1.6e-07	PPR repeat family
PPR_3	PF13812	365 - 423	1.8e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	372 - 403	2.7e-08	PPR repeat
PPR_2	PF13041	375 - 424	3.6e-14	PPR repeat family
PPR	PF01535	378 - 408	7.8e-06	PPR repeat
PPR_long	PF17177	389 - 497	7.3e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	402 - 458	8.6e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	407 - 438	1e-05	PPR repeat
PPR_2	PF13041	410 - 447	1.6e-07	PPR repeat family
PPR	PF01535	414 - 443	2e-07	PPR repeat
PPR_3	PF13812	434 - 490	3.6e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	445 - 493	4.3e-14	PPR repeat family
PPR_1	PF12854	477 - 505	1.4e-06	PPR repeat
PPR_2	PF13041	516 - 564	5.6e-11	PPR repeat family
PPR_2	PF13041	550 - 586	9.4e-08	PPR repeat family
PPR_3	PF13812	574 - 633	1e-05	Pentatricopeptide repeat domain
PPR_1	PF12854	582 - 613	4.1e-09	PPR repeat
PPR_2	PF13041	585 - 633	3.4e-11	PPR repeat family
PPR	PF01535	589 - 618	3.1e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006842)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19280 AT2G19280 AT2G19280 AT2G19280
fragaria_vesca	FvH4_7g04580
prunus_persica	Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0330001
rosa_laevigata	RLG00000029844
rosa_multiflora	Rmu_sc0000499.1_g000004 Rmu_sc0009365.1_g000009 Rmu_sc0009365.1_g000021 Rmu_sc0031998.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320440
rosa_rugosa	Rorug01G0085200 Rorug01G0085300
rosa_samantha	Rh1AG103500 Rh1BG081900 Rh1CG098500 Rh1DG105900
rosa_wichuraiana	Rw1G008230 Rw1G008280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	833, 1327
AciI	CCGC	2 cut(s)	980, 1292
AclWI	GGATC	2 cut(s)	340, 540
AcoI	YGGCCR	1 cut(s)	955
AcsI	RAATTY	4 cut(s)	664, 715, 1420, 1950
AcuI	CTGAAG	2 cut(s)	462, 1019
AfaI	GTAC	4 cut(s)	70, 218, 369, 1034
AfiI	CCNNNNNNNGG	2 cut(s)	614, 2019
AflIII	ACRYGT	3 cut(s)	452, 1071, 1245
AjnI	CCWGG	1 cut(s)	1542
AloI	GAACNNNNNNTCC	2 cut(s)	1286, 1318
AluBI	AGCT	7 cut(s)	49, 1041, 1082, 1187, 1522, 1934, 2007
AluI	AGCT	7 cut(s)	49, 1041, 1082, 1187, 1522, 1934, 2007
Alw21I	GWGCWC	1 cut(s)	1672
Alw26I	GTCTC	4 cut(s)	70, 443, 737, 964
AlwI	GGATC	2 cut(s)	340, 540
AlwNI	CAGNNNCTG	1 cut(s)	983
AoxI	GGCC	3 cut(s)	592, 955, 2021
ApeKI	GCWGC	7 cut(s)	35, 87, 353, 983, 1553, 1931, 2007
ApoI	RAATTY	4 cut(s)	664, 715, 1420, 1950
ArsI	GACNNNNNNTTYG	2 cut(s)	442, 474
AseI	ATTAAT	1 cut(s)	1179
Asp700I	GAANNNNTTC	2 cut(s)	236, 1004
AspS9I	GGNCC	2 cut(s)	592, 2021
AsuC2I	CCSGG	2 cut(s)	385, 1877
AsuHPI	GGTGA	3 cut(s)	568, 773, 1865
BaeGI	GKGCMC	1 cut(s)	1882
BalI	TGGCCA	1 cut(s)	957
BbsI	GAAGAC	1 cut(s)	6
Bbv12I	GWGCWC	1 cut(s)	1672
BbvI	GCAGC	7 cut(s)	22, 74, 340, 970, 1565, 1943, 1994
BccI	CCATC	8 cut(s)	358, 731, 1058, 1237, 1358, 1568, 1831, 2032
BciT130I	CCWGG	1 cut(s)	1544
BciVI	GTATCC	3 cut(s)	1151, 1676, 1862
BcnI	CCSGG	2 cut(s)	385, 1877
BcoDI	GTCTC	4 cut(s)	70, 443, 737, 964
BfaI	CTAG	1 cut(s)	527
BfmI	CTRYAG	4 cut(s)	751, 984, 1687, 2043
BfuI	GTATCC	3 cut(s)	1151, 1676, 1862
BglII	AGATCT	1 cut(s)	1002
BisI	GCNGC	8 cut(s)	36, 88, 354, 981, 984, 1554, 1932, 2008
BlsI	GCNGC	8 cut(s)	37, 89, 355, 982, 985, 1555, 1933, 2009
Bme1390I	CCNGG	3 cut(s)	385, 1544, 1877
BmgT120I	GGNCC	2 cut(s)	592, 2021
BmiI	GGNNCC	1 cut(s)	484
BmrFI	CCNGG	3 cut(s)	385, 1544, 1877
BmrI	ACTGGG	1 cut(s)	716
BmsI	GCATC	5 cut(s)	274, 430, 1249, 1722, 1804
BmuI	ACTGGG	1 cut(s)	716
BpiI	GAAGAC	1 cut(s)	6
BpmI	CTGGAG	2 cut(s)	906, 1296
BpuEI	CTTGAG	1 cut(s)	106
BpuMI	CCSGG	2 cut(s)	385, 1877
BsaBI	GATNNNNATC	1 cut(s)	288
BsaJI	CCNNGG	4 cut(s)	191, 952, 1542, 1888
BsaXI	ACNNNNNCTCC	4 cut(s)	52, 82, 187, 217
Bsc4I	CCNNNNNNNGG	2 cut(s)	614, 2019
Bse1I	ACTGG	4 cut(s)	99, 471, 658, 711
Bse3DI	GCAATG	2 cut(s)	334, 1317
Bse8I	GATNNNNATC	1 cut(s)	288
BseBI	CCWGG	1 cut(s)	1544
BseDI	CCNNGG	4 cut(s)	191, 952, 1542, 1888
BseGI	GGATG	5 cut(s)	289, 369, 1264, 1369, 1552
BseJI	GATNNNNATC	1 cut(s)	288
BseLI	CCNNNNNNNGG	2 cut(s)	614, 2019
BseMI	GCAATG	2 cut(s)	334, 1317
BseMII	CTCAG	1 cut(s)	920
BseNI	ACTGG	4 cut(s)	99, 471, 658, 711
BseRI	GAGGAG	2 cut(s)	287, 461
BseSI	GKGCMC	1 cut(s)	1882
BseXI	GCAGC	7 cut(s)	22, 74, 340, 970, 1565, 1943, 1994
BsgI	GTGCAG	1 cut(s)	1993
BshFI	GGCC	3 cut(s)	594, 957, 2023
BsiHKAI	GWGCWC	1 cut(s)	1672
BsiSI	CCGG	2 cut(s)	384, 1876
BslFI	GGGAC	1 cut(s)	1395
BslI	CCNNNNNNNGG	2 cut(s)	614, 2019
BsmAI	GTCTC	4 cut(s)	70, 443, 737, 964
BsmFI	GGGAC	1 cut(s)	1395
BsmI	GAATGC	1 cut(s)	1556
BsnI	GGCC	3 cut(s)	594, 957, 2023
Bsp1286I	GDGCHC	2 cut(s)	1672, 1882
Bsp1407I	TGTACA	1 cut(s)	1032
Bsp143I	GATC	5 cut(s)	332, 532, 763, 1002, 1827
Bsp19I	CCATGG	1 cut(s)	952
BspACI	CCGC	2 cut(s)	980, 1292
BspANI	GGCC	3 cut(s)	594, 957, 2023
BspCNI	CTCAG	1 cut(s)	919
BspHI	TCATGA	2 cut(s)	1512, 1527
BspLI	GGNNCC	1 cut(s)	484
BspMAI	CTGCAG	1 cut(s)	988
BspPI	GGATC	2 cut(s)	340, 540
BspQI	GCTCTTC	1 cut(s)	1677
BsrDI	GCAATG	2 cut(s)	334, 1317
BsrGI	TGTACA	1 cut(s)	1032
BsrI	ACTGG	4 cut(s)	99, 471, 658, 711
BssECI	CCNNGG	4 cut(s)	191, 952, 1542, 1888
BssMI	GATC	5 cut(s)	332, 532, 763, 1002, 1827
BssNAI	GTATAC	1 cut(s)	834
BssT1I	CCWWGG	2 cut(s)	952, 1888
Bst1107I	GTATAC	1 cut(s)	834
Bst2UI	CCWGG	1 cut(s)	1544
Bst4CI	ACNGT	8 cut(s)	514, 975, 1092, 1386, 1688, 1767, 1850, 1967
Bst6I	CTCTTC	3 cut(s)	438, 740, 1677
BstAUI	TGTACA	1 cut(s)	1032
BstC8I	GCNNGC	4 cut(s)	40, 524, 1118, 1819
BstDEI	CTNAG	1 cut(s)	906
BstDSI	CCRYGG	2 cut(s)	191, 952
BstF5I	GGATG	5 cut(s)	289, 369, 1264, 1369, 1552
BstKTI	GATC	5 cut(s)	335, 535, 766, 1005, 1830
BstMAI	GTCTC	4 cut(s)	70, 443, 737, 964
BstMBI	GATC	5 cut(s)	332, 532, 763, 1002, 1827
BstMWI	GCNNNNNNNGC	2 cut(s)	293, 1928
BstNI	CCWGG	1 cut(s)	1544
BstNSI	RCATGY	5 cut(s)	360, 456, 526, 1075, 1665
BstSCI	CCNGG	3 cut(s)	383, 1542, 1875
BstSFI	CTRYAG	4 cut(s)	751, 984, 1687, 2043
BstSLI	GKGCMC	1 cut(s)	1882
BstV1I	GCAGC	7 cut(s)	22, 74, 340, 970, 1565, 1943, 1994
BstV2I	GAAGAC	1 cut(s)	6
BstX2I	RGATCY	1 cut(s)	1002
BstYI	RGATCY	1 cut(s)	1002
BstZ17I	GTATAC	1 cut(s)	834
BsuI	GTATCC	3 cut(s)	1151, 1676, 1862
BsuRI	GGCC	3 cut(s)	594, 957, 2023
BtgI	CCRYGG	2 cut(s)	191, 952
BtsCI	GGATG	5 cut(s)	289, 369, 1264, 1369, 1552
BtsI	GCAGTG	3 cut(s)	411, 958, 1672
BtsIMutI	CAGTG	3 cut(s)	411, 958, 1672
Cac8I	GCNNGC	4 cut(s)	40, 524, 1118, 1819
CaiI	CAGNNNCTG	1 cut(s)	983
CciI	TCATGA	2 cut(s)	1512, 1527
Cfr13I	GGNCC	2 cut(s)	592, 2021
CseI	GACGC	1 cut(s)	176
Csp6I	GTAC	4 cut(s)	69, 217, 368, 1033
CviQI	GTAC	4 cut(s)	69, 217, 368, 1033
DdeI	CTNAG	1 cut(s)	906
DpnI	GATC	5 cut(s)	334, 534, 765, 1004, 1829
DpnII	GATC	5 cut(s)	332, 532, 763, 1002, 1827
DraI	TTTAAA	1 cut(s)	714
EaeI	YGGCCR	1 cut(s)	955
Eam1104I	CTCTTC	3 cut(s)	438, 740, 1677
EarI	CTCTTC	3 cut(s)	438, 740, 1677
EciI	GGCGGA	1 cut(s)	1307
Eco130I	CCWWGG	2 cut(s)	952, 1888
Eco57I	CTGAAG	2 cut(s)	462, 1019
EcoRII	CCWGG	1 cut(s)	1542
EcoT14I	CCWWGG	2 cut(s)	952, 1888
ErhI	CCWWGG	2 cut(s)	952, 1888
FalI	AAGNNNNNCTT	4 cut(s)	1299, 1331, 1580, 1612
FaqI	GGGAC	1 cut(s)	1395
FauNDI	CATATG	2 cut(s)	342, 580
FblI	GTMKAC	2 cut(s)	833, 1327
Fnu4HI	GCNGC	8 cut(s)	36, 88, 354, 981, 984, 1554, 1932, 2008
FokI	GGATG	5 cut(s)	296, 376, 1271, 1376, 1559
Fsp4HI	GCNGC	8 cut(s)	36, 88, 354, 981, 984, 1554, 1932, 2008
FspBI	CTAG	1 cut(s)	527
GluI	GCNGC	8 cut(s)	36, 88, 354, 981, 984, 1554, 1932, 2008
GsuI	CTGGAG	2 cut(s)	906, 1296
HaeIII	GGCC	3 cut(s)	594, 957, 2023
HapII	CCGG	2 cut(s)	384, 1876
HgaI	GACGC	1 cut(s)	176
HindIII	AAGCTT	1 cut(s)	1080
HpaII	CCGG	2 cut(s)	384, 1876
HphI	GGTGA	3 cut(s)	568, 773, 1865
Hpy166II	GTNNAC	4 cut(s)	409, 559, 834, 1328
Hpy188I	TCNGA	9 cut(s)	231, 319, 363, 570, 1063, 1321, 1373, 1464, 1961
Hpy188III	TCNNGA	9 cut(s)	58, 923, 934, 1086, 1099, 1275, 1513, 1528, 1754
Hpy8I	GTNNAC	4 cut(s)	409, 559, 834, 1328
HpyAV	CCTTC	9 cut(s)	542, 583, 618, 868, 1368, 1372, 1582, 1865, 1897
HpyCH4III	ACNGT	8 cut(s)	514, 975, 1092, 1386, 1688, 1767, 1850, 1967
HpyCH4IV	ACGT	3 cut(s)	887, 1247, 1750
HpyF10VI	GCNNNNNNNGC	2 cut(s)	293, 1928
HpyF3I	CTNAG	1 cut(s)	906
HpySE526I	ACGT	3 cut(s)	887, 1247, 1750
Kzo9I	GATC	5 cut(s)	332, 532, 763, 1002, 1827
LguI	GCTCTTC	1 cut(s)	1677
LmnI	GCTCC	1 cut(s)	1125
Lsp1109I	GCAGC	7 cut(s)	22, 74, 340, 970, 1565, 1943, 1994
LweI	GCATC	5 cut(s)	274, 430, 1249, 1722, 1804
MaeI	CTAG	1 cut(s)	527
MaeII	ACGT	3 cut(s)	887, 1247, 1750
MaeIII	GTNAC	6 cut(s)	125, 462, 574, 1386, 1447, 1657
MalI	GATC	5 cut(s)	334, 534, 765, 1004, 1829
MboI	GATC	5 cut(s)	332, 532, 763, 1002, 1827
MboII	GAAGA	8 cut(s)	6, 455, 727, 811, 997, 1012, 1416, 1664
MflI	RGATCY	1 cut(s)	1002
MhlI	GDGCHC	2 cut(s)	1672, 1882
MlsI	TGGCCA	1 cut(s)	957
MluCI	AATT	9 cut(s)	94, 457, 664, 715, 1221, 1420, 1714, 1939, 1950
MluNI	TGGCCA	1 cut(s)	957
MlyI	GAGTC	2 cut(s)	205, 898
MmeI	TCCRAC	2 cut(s)	341, 1780
Mox20I	TGGCCA	1 cut(s)	957
MroXI	GAANNNNTTC	2 cut(s)	236, 1004
MscI	TGGCCA	1 cut(s)	957
MseI	TTAA	7 cut(s)	173, 543, 662, 713, 897, 1179, 1358
MslI	CAYNNNNRTG	1 cut(s)	527
Msp20I	TGGCCA	1 cut(s)	957
MspA1I	CMGCKG	1 cut(s)	980
MspI	CCGG	2 cut(s)	384, 1876
MspR9I	CCNGG	3 cut(s)	385, 1544, 1877
Mva1269I	GAATGC	1 cut(s)	1556
MvaI	CCWGG	1 cut(s)	1544
MwoI	GCNNNNNNNGC	2 cut(s)	293, 1928
NciI	CCSGG	2 cut(s)	385, 1877
NcoI	CCATGG	1 cut(s)	952
NdeI	CATATG	2 cut(s)	342, 580
NdeII	GATC	5 cut(s)	332, 532, 763, 1002, 1827
NlaIV	GGNNCC	1 cut(s)	484
NmuCI	GTSAC	1 cut(s)	1657
NspI	RCATGY	5 cut(s)	360, 456, 526, 1075, 1665
PaeI	GCATGC	1 cut(s)	526
PagI	TCATGA	2 cut(s)	1512, 1527
PciI	ACATGT	2 cut(s)	452, 1071
PciSI	GCTCTTC	1 cut(s)	1677
PctI	GAATGC	1 cut(s)	1556
PdmI	GAANNNNTTC	2 cut(s)	236, 1004
PfeI	GAWTC	9 cut(s)	165, 232, 650, 811, 848, 926, 1465, 1780, 1915
PfoI	TCCNGGA	1 cut(s)	383
PkrI	GCNGC	8 cut(s)	37, 89, 355, 982, 985, 1555, 1933, 2009
PleI	GAGTC	2 cut(s)	204, 898
PpsI	GAGTC	2 cut(s)	204, 898
PscI	ACATGT	2 cut(s)	452, 1071
PshBI	ATTAAT	1 cut(s)	1179
Psp6I	CCWGG	1 cut(s)	1542
PspGI	CCWGG	1 cut(s)	1542
PspN4I	GGNNCC	1 cut(s)	484
PspPI	GGNCC	2 cut(s)	592, 2021
PstI	CTGCAG	1 cut(s)	988
PstNI	CAGNNNCTG	1 cut(s)	983
PsuI	RGATCY	1 cut(s)	1002
RsaI	GTAC	4 cut(s)	70, 218, 369, 1034
RsaNI	GTAC	4 cut(s)	69, 217, 368, 1033
RseI	CAYNNNNRTG	1 cut(s)	527
SapI	GCTCTTC	1 cut(s)	1677
SaqAI	TTAA	7 cut(s)	173, 543, 662, 713, 897, 1179, 1358
SatI	GCNGC	8 cut(s)	36, 88, 354, 981, 984, 1554, 1932, 2008
Sau3AI	GATC	5 cut(s)	332, 532, 763, 1002, 1827
Sau96I	GGNCC	2 cut(s)	592, 2021
SchI	GAGTC	2 cut(s)	205, 898
ScrFI	CCNGG	3 cut(s)	385, 1544, 1877
SduI	GDGCHC	2 cut(s)	1672, 1882
SfaNI	GCATC	5 cut(s)	274, 430, 1249, 1722, 1804
SfcI	CTRYAG	4 cut(s)	751, 984, 1687, 2043
SmiMI	CAYNNNNRTG	1 cut(s)	527
SmlI	CTYRAG	1 cut(s)	121
SmoI	CTYRAG	1 cut(s)	121
SphI	GCATGC	1 cut(s)	526
Sse9I	AATT	9 cut(s)	94, 457, 664, 715, 1221, 1420, 1714, 1939, 1950
SsiI	CCGC	2 cut(s)	980, 1292
SspI	AATATT	2 cut(s)	601, 1024
SspMI	CTAG	1 cut(s)	527
StyD4I	CCNGG	3 cut(s)	383, 1542, 1875
StyI	CCWWGG	2 cut(s)	952, 1888
TaaI	ACNGT	8 cut(s)	514, 975, 1092, 1386, 1688, 1767, 1850, 1967
TaiI	ACGT	3 cut(s)	890, 1250, 1753
TaqI	TCGA	2 cut(s)	1098, 1842
TaqII	GACCGA	1 cut(s)	919
TasI	AATT	9 cut(s)	94, 457, 664, 715, 1221, 1420, 1714, 1939, 1950
TatI	WGTACW	2 cut(s)	68, 1032
TauI	GCSGC	1 cut(s)	983
TfiI	GAWTC	9 cut(s)	165, 232, 650, 811, 848, 926, 1465, 1780, 1915
Tru1I	TTAA	7 cut(s)	173, 543, 662, 713, 897, 1179, 1358
Tru9I	TTAA	7 cut(s)	173, 543, 662, 713, 897, 1179, 1358
TscAI	CASTG	3 cut(s)	411, 965, 1672
TseFI	GTSAC	1 cut(s)	1657
TseI	GCWGC	7 cut(s)	35, 87, 353, 983, 1553, 1931, 2007
Tsp45I	GTSAC	1 cut(s)	1657
TspDTI	ATGAA	8 cut(s)	173, 597, 602, 727, 731, 812, 1457, 1772
TspGWI	ACGGA	2 cut(s)	180, 998
TspRI	CASTG	3 cut(s)	411, 965, 1672
VspI	ATTAAT	1 cut(s)	1179
XapI	RAATTY	4 cut(s)	664, 715, 1420, 1950
XceI	RCATGY	5 cut(s)	360, 456, 526, 1075, 1665
XmiI	GTMKAC	2 cut(s)	833, 1327
XmnI	GAANNNNTTC	2 cut(s)	236, 1004
XspI	CTAG	1 cut(s)	527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.