Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0006842

Physical Location & Seq

Genomic Coordinates Forward (+)

18065652 .. 18067734

Gene Structure 2083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG103500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGAAGTTGTTGTCGTGGATGATTAGAAATGTGTATGCTACTCGCTTGAAGCTCATCATGTTCAGGACAAGTACAATCAGACCTCTTTCTTCCATATCCACCTCAAGTAACCAGACAGCAGATGATGATGACGATGAAATGAAAAGAATCATGTTGATACTTGCGAAACGTCCTTGGATTCTTGGTTGTCAGAATGGGTATAATGTCTATCGGAATCAGTTCAATGTAGTACAGATTTTGAACTATTTGTTTGAGGAGAGTTTGGATGCTAATCTTGCTTTATACTTTTTCAAGTGGTCAGAATGTTGCGCCGCATCAAAGCATACAGTTTGGACTGTATGTCAAATGGTACATATTTTGGTTTCTGGGAACTTGAATCACAGAGCAGTGGACCTGCTACTGCGTCTTGTGAGAAATCATGCTGAAGAGGAGACAAGTAGTTTGTTACTAGAAGTTCTTTATGGAACCCACAGCGAAAGAAGGGTTTTAGAAACTGTGTGTAGCATGCTAGTCGATCAGTATATTAAGGAAGGCATGGTGAACGTGGCTCTGAATGTGACATATGAAATGAAGCACCTAAACATTTTTCCTTCTGGTGGAGTCTGCAACACTCTGCTGCGAGCATTATTAGAATCAAACCAGTTGGACTTTGCATGGGATTTCTTGGAAGTTATGCGGACAGGAGGACTGGGTTTGAATTCTTCTATTATAAGTCTCTTCATTCATAAGTACTGTAGTGAGGGTGATCTGGGAAGTGGTTTCAAGTTGCTTGTTGAAATGAAGAAGTATGGGATTCAACCTGATGTTGTTTCATATACAATTGTTATTCATTCCCTTTGCAAGATGTCTTATTTGAAAGAAGCCACTACTTTATTGTTTAAGATGACTCAGTTGGGTATCTCTCCTGATTCGGTCTTGATTAGTTCAGTTATTGATGGCCACTGCCAGTTGAGACAAACAGCGGCTGCAATTAAGATACTGAAGATCTTCCGTCCTCCCCTCAATATTTTTTTGTACAATAGCTTTACTTCAAAGCTATGTACAGATGGCAACATGTTTGAAGCTTCTGAACTTTTTCTTGAGATGTCTGAGTTTGGCTTGCTCCCAGATTGTGTTTGTTACTCAACCATAATAGGGGGCTACTGCAAAGTGAAAGACATGAATAGAGCTTTTCTGTATTTTGGAAAAATGTTAAAAAGTGGAATTACACCATCTGCTACCACATACACGTTGCTCATCGATGCTTACTGCAAGTCTGGAGATATAGAAATGGCCGAAGATATGTTTCAAGCAATGCTTTCAGAGGGTCGACTACCTGATATTGTGACTTACAACACTTTAATGGATGGCTTCGGAAGGAAGGGACACTTACAAAAGGTTTTTGGGGTCTTAGATATGATGAATTCTTCTAATGTTTCCCCTGATGTTGTTACATATAACACTCTCATTCATAGTCTTGCCACAAGAGGATTTGCCAATGAGGCAAAACAAATCATGTTTGAACTTATCAAAAGGGGTTTCTCCCTGGATGTAGCAGCATTCACTAATGTTATAGACGGGTTTTCAAAGAAGGGGAACTTTGAGGAAGTCTTTTTTGTGTGGTTCTGCATGAGTGAGCATGAGGTCAAACCCGATGTAGTGACATGCAGTGCCCTTCTCAACGGATACTGTAAGAAACATCAAATGGAACAAGCCAATGTATTATTTCGCAAGATGCTTGATATTGGATTACATCCAGACCGGATACTGTATAACACTTTGATTCGTGGATTTTGTAGTGTTGGAAGCATTGATGATGCTTGCAACTTGATATGTATGATGGTTGAAAATGGTATCCTTCCCAATAACATTACTCAGCGGGCACTTGTCCTTGGGTTCGGAAAAAAGAGGGTTGGGAATCCTGTTTTAGCGGCAGCTCTTAAATTGCAAGAAATTCTTCTCAGATATGGTATTCATGCTGATTTTGATGAATATTTAATACCAGAAAGCTGCACCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

666

Amino Acids

75.16

Weight (kDa)

6.36

Isoelectric Point (pI)

31.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	200 - 328	8.2e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	240 - 281	5.6e-12	PPR repeat family
PPR_1	PF12854	264 - 295	8e-08	PPR repeat
PPR_2	PF13041	267 - 316	4.2e-09	PPR repeat family
PPR_2	PF13041	335 - 383	1.2e-08	PPR repeat family
PPR_3	PF13812	358 - 417	2.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	366 - 397	2.6e-07	PPR repeat
PPR_2	PF13041	369 - 418	1.3e-14	PPR repeat family
PPR_long	PF17177	385 - 499	5.6e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	396 - 452	8.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	401 - 432	2.4e-07	PPR repeat
PPR	PF01535	408 - 436	1.9e-08	PPR repeat
PPR_2	PF13041	408 - 451	2.6e-13	PPR repeat family
TPR_24	PF23276	419 - 530	3.9e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	430 - 484	5.8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	436 - 467	1.1e-06	PPR repeat
PPR_2	PF13041	439 - 487	4.2e-16	PPR repeat family
PPR	PF01535	442 - 471	7.9e-06	PPR repeat
PPR_1	PF12854	471 - 498	4.4e-06	PPR repeat
PPR_2	PF13041	474 - 523	1e-08	PPR repeat family
PPR_2	PF13041	510 - 558	4.5e-10	PPR repeat family
PPR_1	PF12854	541 - 572	2.8e-06	PPR repeat
PPR_2	PF13041	544 - 581	6.3e-09	PPR repeat family
PPR_1	PF12854	576 - 607	4.9e-09	PPR repeat
PPR_2	PF13041	579 - 626	1.1e-09	PPR repeat family
PPR	PF01535	583 - 612	6.1e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006842)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19280 AT2G19280 AT2G19280 AT2G19280
fragaria_vesca	FvH4_7g04580
prunus_persica	Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0330001
rosa_laevigata	RLG00000029844
rosa_multiflora	Rmu_sc0000499.1_g000004 Rmu_sc0009365.1_g000009 Rmu_sc0009365.1_g000021 Rmu_sc0031998.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320440
rosa_rugosa	Rorug01G0085200 Rorug01G0085300
rosa_samantha	Rh1AG103500 Rh1BG081900 Rh1CG098500 Rh1DG105900
rosa_wichuraiana	Rw1G008230 Rw1G008280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	710
Acc36I	ACCTGC	1 cut(s)	402
AccI	GTMKAC	1 cut(s)	1309
AciI	CCGC	5 cut(s)	312, 676, 962, 1858, 1910
AcoI	YGGCCR	2 cut(s)	937, 1272
AcsI	RAATTY	3 cut(s)	697, 1402, 1932
AcuI	CTGAAG	2 cut(s)	444, 1001
AfaI	GTAC	6 cut(s)	73, 231, 351, 731, 1016, 1042
AfiI	CCNNNNNNNGG	2 cut(s)	596, 1134
AflIII	ACRYGT	2 cut(s)	1053, 1227
AhdI	GACNNNNNGTC	1 cut(s)	339
AjnI	CCWGG	1 cut(s)	1524
AluBI	AGCT	7 cut(s)	52, 1023, 1036, 1064, 1169, 1916, 1989
AluI	AGCT	7 cut(s)	52, 1023, 1036, 1064, 1169, 1916, 1989
Alw26I	GTCTC	3 cut(s)	425, 719, 946
AlwNI	CAGNNNCTG	1 cut(s)	965
AoxI	GGCC	2 cut(s)	937, 1272
ApeKI	GCWGC	5 cut(s)	616, 965, 1535, 1913, 1989
ApoI	RAATTY	3 cut(s)	697, 1402, 1932
ArsI	GACNNNNNNTTYG	2 cut(s)	424, 456
Asp700I	GAANNNNTTC	4 cut(s)	218, 986, 1074, 1935
AspLEI	GCGC	1 cut(s)	311
AspS9I	GGNCC	1 cut(s)	391
AsuHPI	GGTGA	2 cut(s)	550, 755
AvaII	GGWCC	1 cut(s)	391
BaeGI	GKGCMC	2 cut(s)	1654, 1864
BalI	TGGCCA	1 cut(s)	939
BbvI	GCAGC	5 cut(s)	603, 952, 1547, 1925, 1976
BccI	CCATC	5 cut(s)	929, 1040, 1219, 1340, 1813
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	1 cut(s)	1526
BciVI	GTATCC	3 cut(s)	1658, 1737, 1844
BcoDI	GTCTC	3 cut(s)	425, 719, 946
BfaI	CTAG	2 cut(s)	449, 509
BfmI	CTRYAG	1 cut(s)	733
BfuAI	ACCTGC	1 cut(s)	402
BfuI	GTATCC	3 cut(s)	1658, 1737, 1844
BglI	GCCNNNNNGGC	1 cut(s)	1481
BglII	AGATCT	1 cut(s)	984
BisI	GCNGC	8 cut(s)	312, 617, 963, 966, 1536, 1911, 1914, 1990
BlsI	GCNGC	8 cut(s)	313, 618, 964, 967, 1537, 1912, 1915, 1991
BmcAI	AGTACT	1 cut(s)	731
Bme1390I	CCNGG	1 cut(s)	1526
Bme18I	GGWCC	1 cut(s)	391
BmeRI	GACNNNNNGTC	1 cut(s)	339
BmgT120I	GGNCC	1 cut(s)	391
BmiI	GGNNCC	1 cut(s)	466
BmrFI	CCNGG	1 cut(s)	1526
BmrI	ACTGGG	1 cut(s)	698
BmsI	GCATC	5 cut(s)	256, 323, 1231, 1704, 1786
BmuI	ACTGGG	1 cut(s)	698
BpmI	CTGGAG	1 cut(s)	1278
BpuEI	CTTGAG	2 cut(s)	88, 1100
Bsa29I	ATCGAT	1 cut(s)	1239
BsaBI	GATNNNNATC	1 cut(s)	270
BsaJI	CCNNGG	3 cut(s)	173, 1524, 1870
BsaWI	WCCGGW	1 cut(s)	1740
Bsc4I	CCNNNNNNNGG	2 cut(s)	596, 1134
Bse1I	ACTGG	3 cut(s)	640, 693, 946
Bse3DI	GCAATG	1 cut(s)	1299
Bse8I	GATNNNNATC	1 cut(s)	270
BseBI	CCWGG	1 cut(s)	1526
BseCI	ATCGAT	1 cut(s)	1239
BseDI	CCNNGG	3 cut(s)	173, 1524, 1870
BseGI	GGATG	5 cut(s)	24, 271, 1351, 1534, 1732
BseJI	GATNNNNATC	1 cut(s)	270
BseLI	CCNNNNNNNGG	2 cut(s)	596, 1134
BseMI	GCAATG	1 cut(s)	1299
BseMII	CTCAG	4 cut(s)	902, 1080, 1868, 1954
BseNI	ACTGG	3 cut(s)	640, 693, 946
BseRI	GAGGAG	2 cut(s)	269, 443
BseSI	GKGCMC	2 cut(s)	1654, 1864
BseXI	GCAGC	5 cut(s)	603, 952, 1547, 1925, 1976
BsgI	GTGCAG	1 cut(s)	1975
BshFI	GGCC	2 cut(s)	939, 1274
BshVI	ATCGAT	1 cut(s)	1239
BsiSI	CCGG	1 cut(s)	1741
BslFI	GGGAC	1 cut(s)	1377
BslI	CCNNNNNNNGG	2 cut(s)	596, 1134
BsmAI	GTCTC	3 cut(s)	425, 719, 946
BsmFI	GGGAC	1 cut(s)	1377
BsmI	GAATGC	1 cut(s)	1538
BsnI	GGCC	2 cut(s)	939, 1274
Bsp1286I	GDGCHC	2 cut(s)	1654, 1864
Bsp1407I	TGTACA	2 cut(s)	1014, 1040
Bsp143I	GATC	3 cut(s)	514, 745, 984
BspACI	CCGC	5 cut(s)	312, 676, 962, 1858, 1910
BspANI	GGCC	2 cut(s)	939, 1274
BspCNI	CTCAG	4 cut(s)	901, 1081, 1867, 1953
BspDI	ATCGAT	1 cut(s)	1239
BspLI	GGNNCC	1 cut(s)	466
BspMI	ACCTGC	1 cut(s)	402
BsrDI	GCAATG	1 cut(s)	1299
BsrGI	TGTACA	2 cut(s)	1014, 1040
BsrI	ACTGG	3 cut(s)	640, 693, 946
BssECI	CCNNGG	3 cut(s)	173, 1524, 1870
BssMI	GATC	3 cut(s)	514, 745, 984
BssT1I	CCWWGG	2 cut(s)	173, 1870
Bst2UI	CCWGG	1 cut(s)	1526
Bst4CI	ACNGT	6 cut(s)	328, 337, 496, 734, 1670, 1749
Bst6I	CTCTTC	2 cut(s)	420, 722
BstAUI	TGTACA	2 cut(s)	1014, 1040
BstC8I	GCNNGC	5 cut(s)	506, 621, 1100, 1801, 1860
BstDEI	CTNAG	5 cut(s)	888, 1089, 1390, 1854, 1940
BstF5I	GGATG	5 cut(s)	24, 271, 1351, 1534, 1732
BstHHI	GCGC	1 cut(s)	311
BstKTI	GATC	3 cut(s)	517, 748, 987
BstMAI	GTCTC	3 cut(s)	425, 719, 946
BstMBI	GATC	3 cut(s)	514, 745, 984
BstMWI	GCNNNNNNNGC	2 cut(s)	275, 1481
BstNI	CCWGG	1 cut(s)	1526
BstNSI	RCATGY	3 cut(s)	508, 1057, 1647
BstSCI	CCNGG	1 cut(s)	1524
BstSFI	CTRYAG	1 cut(s)	733
BstSLI	GKGCMC	2 cut(s)	1654, 1864
BstV1I	GCAGC	5 cut(s)	603, 952, 1547, 1925, 1976
BstX2I	RGATCY	1 cut(s)	984
BstYI	RGATCY	1 cut(s)	984
Bsu15I	ATCGAT	1 cut(s)	1239
BsuI	GTATCC	3 cut(s)	1658, 1737, 1844
BsuRI	GGCC	2 cut(s)	939, 1274
BsuTUI	ATCGAT	1 cut(s)	1239
BtsCI	GGATG	5 cut(s)	24, 271, 1351, 1534, 1732
BtsI	GCAGTG	3 cut(s)	393, 940, 1654
BtsIMutI	CAGTG	3 cut(s)	393, 940, 1654
BveI	ACCTGC	1 cut(s)	402
Cac8I	GCNNGC	5 cut(s)	506, 621, 1100, 1801, 1860
CaiI	CAGNNNCTG	1 cut(s)	965
CfoI	GCGC	1 cut(s)	311
Cfr13I	GGNCC	1 cut(s)	391
ClaI	ATCGAT	1 cut(s)	1239
CseI	GACGC	1 cut(s)	392
Csp6I	GTAC	6 cut(s)	72, 230, 350, 730, 1015, 1041
CviQI	GTAC	6 cut(s)	72, 230, 350, 730, 1015, 1041
DdeI	CTNAG	5 cut(s)	888, 1089, 1390, 1854, 1940
DpnI	GATC	3 cut(s)	516, 747, 986
DpnII	GATC	3 cut(s)	514, 745, 984
DriI	GACNNNNNGTC	1 cut(s)	339
EaeI	YGGCCR	2 cut(s)	937, 1272
Eam1104I	CTCTTC	2 cut(s)	420, 722
Eam1105I	GACNNNNNGTC	1 cut(s)	339
EarI	CTCTTC	2 cut(s)	420, 722
Eco130I	CCWWGG	2 cut(s)	173, 1870
Eco47I	GGWCC	1 cut(s)	391
Eco57I	CTGAAG	2 cut(s)	444, 1001
EcoRI	GAATTC	2 cut(s)	697, 1402
EcoRII	CCWGG	1 cut(s)	1524
EcoT14I	CCWWGG	2 cut(s)	173, 1870
ErhI	CCWWGG	2 cut(s)	173, 1870
FalI	AAGNNNNNCTT	8 cut(s)	1281, 1313, 1352, 1384, 1562, 1594, 1920, 1952
FaqI	GGGAC	1 cut(s)	1377
FauI	CCCGC	1 cut(s)	1851
FauNDI	CATATG	1 cut(s)	562
FblI	GTMKAC	1 cut(s)	1309
Fnu4HI	GCNGC	8 cut(s)	312, 617, 963, 966, 1536, 1911, 1914, 1990
FokI	GGATG	5 cut(s)	31, 278, 1358, 1541, 1719
Fsp4HI	GCNGC	8 cut(s)	312, 617, 963, 966, 1536, 1911, 1914, 1990
FspBI	CTAG	2 cut(s)	449, 509
GlaI	GCGC	1 cut(s)	310
GluI	GCNGC	8 cut(s)	312, 617, 963, 966, 1536, 1911, 1914, 1990
GsuI	CTGGAG	1 cut(s)	1278
HaeIII	GGCC	2 cut(s)	939, 1274
HapII	CCGG	1 cut(s)	1741
HgaI	GACGC	1 cut(s)	392
HhaI	GCGC	1 cut(s)	311
Hin6I	GCGC	1 cut(s)	309
HinP1I	GCGC	1 cut(s)	309
HincII	GTYRAC	1 cut(s)	1310
HindII	GTYRAC	1 cut(s)	1310
HindIII	AAGCTT	1 cut(s)	1062
HpaII	CCGG	1 cut(s)	1741
HphI	GGTGA	2 cut(s)	550, 755
Hpy166II	GTNNAC	3 cut(s)	391, 541, 1310
Hpy188III	TCNNGA	6 cut(s)	64, 905, 916, 1079, 1257, 1736
Hpy8I	GTNNAC	3 cut(s)	391, 541, 1310
HpyAV	CCTTC	8 cut(s)	474, 524, 600, 1350, 1354, 1564, 1664, 1847
HpyCH4III	ACNGT	6 cut(s)	328, 337, 496, 734, 1670, 1749
HpyCH4IV	ACGT	3 cut(s)	169, 543, 1229
HpyF10VI	GCNNNNNNNGC	2 cut(s)	275, 1481
HpyF3I	CTNAG	5 cut(s)	888, 1089, 1390, 1854, 1940
HpySE526I	ACGT	3 cut(s)	169, 543, 1229
HspAI	GCGC	1 cut(s)	309
Kzo9I	GATC	3 cut(s)	514, 745, 984
LmnI	GCTCC	1 cut(s)	1107
Lsp1109I	GCAGC	5 cut(s)	603, 952, 1547, 1925, 1976
LweI	GCATC	5 cut(s)	256, 323, 1231, 1704, 1786
MaeI	CTAG	2 cut(s)	449, 509
MaeII	ACGT	3 cut(s)	169, 543, 1229
MaeIII	GTNAC	7 cut(s)	107, 444, 556, 1118, 1324, 1429, 1639
MalI	GATC	3 cut(s)	516, 747, 986
MboI	GATC	3 cut(s)	514, 745, 984
MfeI	CAATTG	1 cut(s)	819
MflI	RGATCY	1 cut(s)	984
MhlI	GDGCHC	2 cut(s)	1654, 1864
MlsI	TGGCCA	1 cut(s)	939
MluCI	AATT	7 cut(s)	697, 819, 969, 1203, 1402, 1922, 1932
MluNI	TGGCCA	1 cut(s)	939
MlyI	GAGTC	2 cut(s)	609, 880
MmeI	TCCRAC	2 cut(s)	624, 1762
Mox20I	TGGCCA	1 cut(s)	939
MroXI	GAANNNNTTC	4 cut(s)	218, 986, 1074, 1935
MscI	TGGCCA	1 cut(s)	939
MseI	TTAA	7 cut(s)	525, 879, 972, 1193, 1340, 1920, 1976
MslI	CAYNNNNRTG	1 cut(s)	1340
Msp20I	TGGCCA	1 cut(s)	939
MspA1I	CMGCKG	2 cut(s)	962, 1858
MspI	CCGG	1 cut(s)	1741
MspR9I	CCNGG	1 cut(s)	1526
MunI	CAATTG	1 cut(s)	819
Mva1269I	GAATGC	1 cut(s)	1538
MvaI	CCWGG	1 cut(s)	1526
MwoI	GCNNNNNNNGC	2 cut(s)	275, 1481
NdeI	CATATG	1 cut(s)	562
NdeII	GATC	3 cut(s)	514, 745, 984
NlaIV	GGNNCC	1 cut(s)	466
NmuCI	GTSAC	3 cut(s)	556, 1324, 1639
NspI	RCATGY	3 cut(s)	508, 1057, 1647
PaeI	GCATGC	1 cut(s)	508
PciI	ACATGT	1 cut(s)	1053
PctI	GAATGC	1 cut(s)	1538
PdmI	GAANNNNTTC	4 cut(s)	218, 986, 1074, 1935
PfeI	GAWTC	9 cut(s)	147, 178, 214, 376, 632, 793, 908, 1762, 1897
PkrI	GCNGC	8 cut(s)	313, 618, 964, 967, 1537, 1912, 1915, 1991
PleI	GAGTC	2 cut(s)	608, 880
PpsI	GAGTC	2 cut(s)	608, 880
PscI	ACATGT	1 cut(s)	1053
PsiI	TTATAA	1 cut(s)	710
Psp6I	CCWGG	1 cut(s)	1524
PspGI	CCWGG	1 cut(s)	1524
PspN4I	GGNNCC	1 cut(s)	466
PspPI	GGNCC	1 cut(s)	391
PstNI	CAGNNNCTG	1 cut(s)	965
PsuI	RGATCY	1 cut(s)	984
RsaI	GTAC	6 cut(s)	73, 231, 351, 731, 1016, 1042
RsaNI	GTAC	6 cut(s)	72, 230, 350, 730, 1015, 1041
RseI	CAYNNNNRTG	1 cut(s)	1340
SalI	GTCGAC	1 cut(s)	1308
SaqAI	TTAA	7 cut(s)	525, 879, 972, 1193, 1340, 1920, 1976
SatI	GCNGC	8 cut(s)	312, 617, 963, 966, 1536, 1911, 1914, 1990
Sau3AI	GATC	3 cut(s)	514, 745, 984
Sau96I	GGNCC	1 cut(s)	391
ScaI	AGTACT	1 cut(s)	731
SchI	GAGTC	2 cut(s)	609, 880
ScrFI	CCNGG	1 cut(s)	1526
SduI	GDGCHC	2 cut(s)	1654, 1864
SfaNI	GCATC	5 cut(s)	256, 323, 1231, 1704, 1786
SfcI	CTRYAG	1 cut(s)	733
SinI	GGWCC	1 cut(s)	391
SmiMI	CAYNNNNRTG	1 cut(s)	1340
SmlI	CTYRAG	2 cut(s)	103, 1079
SmoI	CTYRAG	2 cut(s)	103, 1079
SphI	GCATGC	1 cut(s)	508
Sse9I	AATT	7 cut(s)	697, 819, 969, 1203, 1402, 1922, 1932
SsiI	CCGC	5 cut(s)	312, 676, 962, 1858, 1910
SspI	AATATT	2 cut(s)	1006, 1973
SspMI	CTAG	2 cut(s)	449, 509
StyD4I	CCNGG	1 cut(s)	1524
StyI	CCWWGG	2 cut(s)	173, 1870
TaaI	ACNGT	6 cut(s)	328, 337, 496, 734, 1670, 1749
TaiI	ACGT	3 cut(s)	172, 546, 1232
TaqI	TCGA	3 cut(s)	513, 1239, 1309
TaqII	GACCGA	1 cut(s)	901
TasI	AATT	7 cut(s)	697, 819, 969, 1203, 1402, 1922, 1932
TatI	WGTACW	5 cut(s)	71, 229, 729, 1014, 1040
TauI	GCSGC	3 cut(s)	314, 965, 1913
TfiI	GAWTC	9 cut(s)	147, 178, 214, 376, 632, 793, 908, 1762, 1897
Tru1I	TTAA	7 cut(s)	525, 879, 972, 1193, 1340, 1920, 1976
Tru9I	TTAA	7 cut(s)	525, 879, 972, 1193, 1340, 1920, 1976
TscAI	CASTG	3 cut(s)	393, 947, 1654
TseFI	GTSAC	3 cut(s)	556, 1324, 1639
TseI	GCWGC	5 cut(s)	616, 965, 1535, 1913, 1989
Tsp45I	GTSAC	3 cut(s)	556, 1324, 1639
TspGWI	ACGGA	2 cut(s)	980, 1677
TspRI	CASTG	3 cut(s)	393, 947, 1654
VpaK11BI	GGWCC	1 cut(s)	391
XapI	RAATTY	3 cut(s)	697, 1402, 1932
XceI	RCATGY	3 cut(s)	508, 1057, 1647
XmiI	GTMKAC	1 cut(s)	1309
XmnI	GAANNNNTTC	4 cut(s)	218, 986, 1074, 1935
XspI	CTAG	2 cut(s)	449, 509
ZrmI	AGTACT	1 cut(s)	731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.