FvH4_7g07970
MYB Family

response regulator

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
7901871 .. 7905634
3764 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g07970.t1

Sequence Viewer

Length: 1875 bp
ATGTTAGATGACATGGTTTTACAAGGAAAAACTGATTGTGTAAAACTTCGTGTACTTGTTATAGGTAACGACGCTACATTTCTTGCCAATGTCTCTGAATTTCTTCACATTCTGAACCATCAAGTTTGGACATATACAAATCCATACATTGCTTTCTCTGCTCTTCGGGTTAGGAGAAACTTTTATGACCTCATTATAACAGACCTTTATCTACCTGATATGGACGGTTTTGAAGTACAGAAGAGGGTTCGACAAGAATTTAAGCTGCCGTTGATCATTGTTTCGGCCGACGATAGAGAGCATGTCATATTAAAGGCTCTTAAGCTTGGCGCTGCACATTATATAGTGAAACCAGTTTGCTTTGATGATGTGAAAAACCTTTGGCAATTTGTTGTCAATGTCAACGATAGATCACCAAAAAAACATTCTTTTGTTGAGGAAATTGAAAGTGGTGGCGAACAATCAAGCGAGGCCATATCTGACCAGGATACAAATGGCGATCATGTGAAAAAGAATTCCAAGAGGAGAAGATTAACAAAGGAAGGCAATGCTCCAAAGAAGGCAAAGTTGATATGGACGCAAGAGCTCCAGGCTAGATTTCTGGAATCCATTCATTTTATAGGCCTAGAAAGGGCTGTTCCGAAGACTATTCTTGAGGTCATGAACGTTGAAGGCCTGACTAGAGAAAACGTGGCGAGCCATTTGCAGAAGTATAGACAGTTCTTAAGAAGAGTTGCAGCAAAGATTTCAGTAAGTAAATCGGATATTGTTAACCAATCCCAGATATCAAGATCTTCAATTTTCGGGGATAGCAGTGCTTCGATATTCCAGCAGCAGCCCATTTCAGGACAGAATATGTTTATGAATCTTAATTCTTCAAGCCTCGGATATCCCCTCTTTCAATCCAATGATCATGAAGCATCAACCACTTCCATGCCTCCATTCCGGAACACACACTTATATCATCCCAATTCTCTCTCAAATTTTCAGATGCCACAGCAAGCTGCTTTCATGGGATACCCAAGGTCTTTCCAACCAGCTGACAATTACTCATCAGTTAATAACAATGTTGAAAGCAATTGGTCAAGTACTAATGGACTCCAAACTCAAACAAGTTCATTGACCAACCAGCTATATGGCAATTACAATAACTGTGGCATGACTGCAGGGTTTCAGTACAACAATGATTTTAATAATGGTAATTCATGGAATGGAACTATGGGATTTCTGAATGATTCTAGTAGTCTTATCACCAACAACAACTATGGTGGATTCCCAAGGAATAGTGCTGCTTCAGTAGGGTTGGCTGGATTTAACTCAAATCCAAACCCTAATTTGATGGTGGAGAACCACGGCCGAGATTCGTCAACTTGTCGACTCGATCAAAATGTGCTTCATCAAGACATGAATAATGCATCATTACCACCGGGTAATTTGATGTTGAGTAACAAGAATTTTTCAGGCGTGGAGGATGATGCTTCATCAGTTGGTTTTGGTGGTGGTTTTACAACTACTACTGTGGAAGCTGCTGCGGCTTCTAGCTCCAATGTTGTAGACCTATCACCAAGTAATCAGAATCAAACCGGCGACTACTTTGATGACCTTCATGATATCTTATTCAACGATACCAATTTGGAACCTGTTAATCATCAGGAAGAAGGAAAAGAAGTGTTCGATTCTTATGAGACTGGTGCAAGTTTGGTTCAAGGGAATGCCTCCTTGCTCAGAGAACCCAACGGCCAGAATTCTAATAGAGAAGTTATCGAAGAAGTCGAGTTTGACTGGTTGGATCTTTTGGATGCCACAGCAATTCTAGAAAATGTGTCTCTAGATGAGGATTGGAAGAAGTTTATGGACACAATCCTCAACGGCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

625

Amino Acids

69.7

Weight (kDa)

5.08

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Response_reg PF00072 18 - 125 4.3e-17 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 197
AccI GTMKAC 2 cut(s) 1375, 1554
AccIII TCCGGA 1 cut(s) 945
AciI CCGC 1 cut(s) 1532
AclI AACGTT 1 cut(s) 666
AclWI GGATC 1 cut(s) 1797
AcoI YGGCCR 3 cut(s) 285, 1354, 1738
AcsI RAATTY 6 cut(s) 98, 257, 514, 982, 1453, 1744
AcuI CTGAAG 1 cut(s) 1278
AfaI GTAC 4 cut(s) 54, 237, 1090, 1178
AfiI CCNNNNNNNGG 2 cut(s) 631, 845
AflII CTTAAG 2 cut(s) 320, 724
AgsI TTSAA 9 cut(s) 233, 446, 671, 798, 879, 902, 1073, 1621, 1706
AjnI CCWGG 2 cut(s) 483, 588
AjuI GAANNNNNNNTTGG 2 cut(s) 409, 441
AluBI AGCT 8 cut(s) 265, 325, 586, 1004, 1040, 1132, 1526, 1542
AluI AGCT 8 cut(s) 265, 325, 586, 1004, 1040, 1132, 1526, 1542
Alw21I GWGCWC 1 cut(s) 588
Alw26I GTCTC 3 cut(s) 97, 1679, 1830
AlwI GGATC 1 cut(s) 1797
Aor13HI TCCGGA 1 cut(s) 945
AoxI GGCC 6 cut(s) 285, 471, 622, 673, 1354, 1738
ApeKI GCWGC 9 cut(s) 265, 332, 737, 832, 835, 1004, 1289, 1526, 1529
ApoI RAATTY 6 cut(s) 98, 257, 514, 982, 1453, 1744
Asp700I GAANNNNTTC 2 cut(s) 102, 609
AspLEI GCGC 1 cut(s) 332
AsuC2I CCSGG 1 cut(s) 1428
AsuHPI GGTGA 3 cut(s) 405, 1243, 1554
BanII GRGCYC 1 cut(s) 588
BbsI GAAGAC 1 cut(s) 650
Bbv12I GWGCWC 1 cut(s) 588
BbvI GCAGC 9 cut(s) 252, 319, 749, 844, 847, 991, 1276, 1513, 1516
BccI CCATC 2 cut(s) 126, 1333
BceAI ACGGC 3 cut(s) 253, 1369, 1753
BcgI CGANNNNNNTGC 2 cut(s) 685, 719
BciT130I CCWGG 2 cut(s) 485, 590
BciVI GTATCC 2 cut(s) 481, 1010
BclI TGATCA 2 cut(s) 273, 910
BcnI CCSGG 1 cut(s) 1428
BcoDI GTCTC 3 cut(s) 97, 1679, 1830
BfaI CTAG 7 cut(s) 594, 626, 681, 1239, 1539, 1814, 1829
BfmI CTRYAG 1 cut(s) 1164
BfoI RGCGCY 1 cut(s) 333
BfrI CTTAAG 2 cut(s) 320, 724
BfuI GTATCC 2 cut(s) 481, 1010
BglII AGATCT 1 cut(s) 791
BmcAI AGTACT 1 cut(s) 1090
Bme1390I CCNGG 3 cut(s) 485, 590, 1428
BmiI GGNNCC 1 cut(s) 1638
BmrFI CCNGG 3 cut(s) 485, 590, 1428
BmsI GCATC 5 cut(s) 929, 981, 1424, 1465, 1789
BpiI GAAGAC 1 cut(s) 650
BpmI CTGGAG 1 cut(s) 572
BpuEI CTTGAG 1 cut(s) 674
BpuMI CCSGG 1 cut(s) 1428
BsaJI CCNNGG 4 cut(s) 883, 1022, 1277, 1351
BsaWI WCCGGW 1 cut(s) 945
Bsc4I CCNNNNNNNGG 2 cut(s) 631, 845
Bse118I RCCGGY 1 cut(s) 1583
Bse1I ACTGG 3 cut(s) 353, 1693, 1787
Bse3DI GCAATG 2 cut(s) 147, 553
BseAI TCCGGA 1 cut(s) 945
BseBI CCWGG 2 cut(s) 485, 590
BseDI CCNNGG 4 cut(s) 883, 1022, 1277, 1351
BseGI GGATG 3 cut(s) 964, 1477, 1804
BseLI CCNNNNNNNGG 2 cut(s) 631, 845
BseMI GCAATG 2 cut(s) 147, 553
BseMII CTCAG 1 cut(s) 1738
BseNI ACTGG 3 cut(s) 353, 1693, 1787
BseRI GAGGAG 1 cut(s) 538
BseX3I CGGCCG 2 cut(s) 285, 1354
BseXI GCAGC 9 cut(s) 252, 319, 749, 844, 847, 991, 1276, 1513, 1516
BsgI GTGCAG 1 cut(s) 318
Bsh1285I CGRYCG 2 cut(s) 288, 1357
BshFI GGCC 6 cut(s) 287, 473, 624, 675, 1356, 1740
BsiEI CGRYCG 2 cut(s) 288, 1357
BsiHKAI GWGCWC 1 cut(s) 588
BsiSI CCGG 3 cut(s) 946, 1427, 1584
BslI CCNNNNNNNGG 2 cut(s) 631, 845
BsmAI GTCTC 3 cut(s) 97, 1679, 1830
BsmI GAATGC 1 cut(s) 1717
BsnI GGCC 6 cut(s) 287, 473, 624, 675, 1356, 1740
Bsp1286I GDGCHC 1 cut(s) 588
Bsp13I TCCGGA 1 cut(s) 945
Bsp143I GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
BspACI CCGC 1 cut(s) 1532
BspANI GGCC 6 cut(s) 287, 473, 624, 675, 1356, 1740
BspCNI CTCAG 1 cut(s) 1737
BspEI TCCGGA 1 cut(s) 945
BspHI TCATGA 3 cut(s) 660, 913, 1606
BspLI GGNNCC 1 cut(s) 1638
BspMAI CTGCAG 1 cut(s) 1168
BspPI GGATC 1 cut(s) 1797
BspQI GCTCTTC 1 cut(s) 168
BspTI CTTAAG 2 cut(s) 320, 724
BsrDI GCAATG 2 cut(s) 147, 553
BsrFI RCCGGY 1 cut(s) 1583
BsrI ACTGG 3 cut(s) 353, 1693, 1787
BssAI RCCGGY 1 cut(s) 1583
BssECI CCNNGG 4 cut(s) 883, 1022, 1277, 1351
BssMI GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
BssT1I CCWWGG 2 cut(s) 1022, 1277
Bst2UI CCWGG 2 cut(s) 485, 590
Bst4CI ACNGT 4 cut(s) 227, 720, 1154, 1519
Bst6I CTCTTC 3 cut(s) 168, 236, 724
BstAFI CTTAAG 2 cut(s) 320, 724
BstC8I GCNNGC 2 cut(s) 697, 1002
BstDEI CTNAG 1 cut(s) 1724
BstDSI CCRYGG 1 cut(s) 1351
BstF5I GGATG 3 cut(s) 964, 1477, 1804
BstH2I RGCGCY 1 cut(s) 333
BstHHI GCGC 1 cut(s) 332
BstKTI GATC 7 cut(s) 276, 413, 502, 794, 913, 1384, 1792
BstMAI GTCTC 3 cut(s) 97, 1679, 1830
BstMBI GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
BstMCI CGRYCG 2 cut(s) 288, 1357
BstMWI GCNNNNNNNGC 2 cut(s) 158, 1532
BstNI CCWGG 2 cut(s) 485, 590
BstNSI RCATGY 1 cut(s) 305
BstSCI CCNGG 3 cut(s) 483, 588, 1426
BstSFI CTRYAG 1 cut(s) 1164
BstV1I GCAGC 9 cut(s) 252, 319, 749, 844, 847, 991, 1276, 1513, 1516
BstV2I GAAGAC 1 cut(s) 650
BstX2I RGATCY 2 cut(s) 791, 1789
BstXI CCANNNNNNTGG 1 cut(s) 1136
BstYI RGATCY 2 cut(s) 791, 1789
BstZI CGGCCG 2 cut(s) 285, 1354
BsuI GTATCC 2 cut(s) 481, 1010
BsuRI GGCC 6 cut(s) 287, 473, 624, 675, 1356, 1740
BtgI CCRYGG 1 cut(s) 1351
BtsCI GGATG 3 cut(s) 964, 1477, 1804
BtsI GCAGTG 1 cut(s) 820
BtsIMutI CAGTG 1 cut(s) 820
Cac8I GCNNGC 2 cut(s) 697, 1002
CciI TCATGA 3 cut(s) 660, 913, 1606
CfoI GCGC 1 cut(s) 332
Cfr10I RCCGGY 1 cut(s) 1583
CseI GACGC 2 cut(s) 80, 586
Csp6I GTAC 4 cut(s) 53, 236, 1089, 1177
CspCI CAANNNNNGTGG 4 cut(s) 1135, 1170, 1249, 1284
CviQI GTAC 4 cut(s) 53, 236, 1089, 1177
DdeI CTNAG 1 cut(s) 1724
DpnI GATC 7 cut(s) 275, 412, 501, 793, 912, 1383, 1791
DpnII GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
EaeI YGGCCR 3 cut(s) 285, 1354, 1738
EagI CGGCCG 2 cut(s) 285, 1354
Eam1104I CTCTTC 3 cut(s) 168, 236, 724
EarI CTCTTC 3 cut(s) 168, 236, 724
Ecl136II GAGCTC 1 cut(s) 586
EclXI CGGCCG 2 cut(s) 285, 1354
Eco130I CCWWGG 2 cut(s) 1022, 1277
Eco147I AGGCCT 2 cut(s) 624, 675
Eco24I GRGCYC 1 cut(s) 588
Eco32I GATATC 3 cut(s) 786, 890, 1612
Eco52I CGGCCG 2 cut(s) 285, 1354
Eco53kI GAGCTC 1 cut(s) 586
Eco57I CTGAAG 1 cut(s) 1278
EcoICRI GAGCTC 1 cut(s) 586
EcoRI GAATTC 2 cut(s) 514, 1744
EcoRII CCWGG 2 cut(s) 483, 588
EcoRV GATATC 3 cut(s) 786, 890, 1612
EcoT14I CCWWGG 2 cut(s) 1022, 1277
EcoT22I ATGCAT 1 cut(s) 1417
EcoT38I GRGCYC 1 cut(s) 588
ErhI CCWWGG 2 cut(s) 1022, 1277
FbaI TGATCA 2 cut(s) 273, 910
FblI GTMKAC 2 cut(s) 1375, 1554
FokI GGATG 3 cut(s) 951, 1484, 1811
FriOI GRGCYC 1 cut(s) 588
FspBI CTAG 7 cut(s) 594, 626, 681, 1239, 1539, 1814, 1829
GlaI GCGC 1 cut(s) 331
GsuI CTGGAG 1 cut(s) 572
HaeII RGCGCY 1 cut(s) 333
HaeIII GGCC 6 cut(s) 287, 473, 624, 675, 1356, 1740
HapII CCGG 3 cut(s) 946, 1427, 1584
HgaI GACGC 2 cut(s) 80, 586
HhaI GCGC 1 cut(s) 332
Hin6I GCGC 1 cut(s) 330
HinP1I GCGC 1 cut(s) 330
HincII GTYRAC 4 cut(s) 403, 772, 1368, 1376
HindII GTYRAC 4 cut(s) 403, 772, 1368, 1376
HindIII AAGCTT 1 cut(s) 323
HinfI GANTC 9 cut(s) 605, 865, 1098, 1235, 1272, 1361, 1377, 1576, 1676
HpaI GTTAAC 1 cut(s) 772
HpaII CCGG 3 cut(s) 946, 1427, 1584
HphI GGTGA 3 cut(s) 405, 1243, 1554
Hpy166II GTNNAC 6 cut(s) 53, 403, 772, 1368, 1376, 1555
Hpy8I GTNNAC 6 cut(s) 53, 403, 772, 1368, 1376, 1555
Hpy99I CGWCG 2 cut(s) 74, 293
HpyAV CCTTC 5 cut(s) 536, 553, 665, 1613, 1652
HpyCH4III ACNGT 4 cut(s) 227, 720, 1154, 1519
HpyCH4IV ACGT 2 cut(s) 666, 690
HpyCH4V TGCA 6 cut(s) 335, 706, 737, 1166, 1415, 1694
HpyF10VI GCNNNNNNNGC 2 cut(s) 158, 1532
HpyF3I CTNAG 1 cut(s) 1724
HpySE526I ACGT 2 cut(s) 666, 690
HspAI GCGC 1 cut(s) 330
Kpn2I TCCGGA 1 cut(s) 945
Ksp22I TGATCA 2 cut(s) 273, 910
KspAI GTTAAC 1 cut(s) 772
Kzo9I GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 3 cut(s) 556, 591, 1547
Lsp1109I GCAGC 9 cut(s) 252, 319, 749, 844, 847, 991, 1276, 1513, 1516
LweI GCATC 5 cut(s) 929, 981, 1424, 1465, 1789
MaeI CTAG 7 cut(s) 594, 626, 681, 1239, 1539, 1814, 1829
MaeII ACGT 2 cut(s) 666, 690
MaeIII GTNAC 2 cut(s) 65, 1445
MalI GATC 7 cut(s) 275, 412, 501, 793, 912, 1383, 1791
MboI GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
MfeI CAATTG 1 cut(s) 1078
MflI RGATCY 2 cut(s) 791, 1789
MhlI GDGCHC 1 cut(s) 588
MlyI GAGTC 2 cut(s) 1092, 1371
MmeI TCCRAC 2 cut(s) 1057, 1767
Mph1103I ATGCAT 1 cut(s) 1417
MroI TCCGGA 1 cut(s) 945
MroXI GAANNNNTTC 2 cut(s) 102, 609
MslI CAYNNNNRTG 1 cut(s) 932
MspA1I CMGCKG 1 cut(s) 1040
MspCI CTTAAG 2 cut(s) 320, 724
MspI CCGG 3 cut(s) 946, 1427, 1584
MspR9I CCNGG 3 cut(s) 485, 590, 1428
MunI CAATTG 1 cut(s) 1078
Mva1269I GAATGC 1 cut(s) 1717
MvaI CCWGG 2 cut(s) 485, 590
MwoI GCNNNNNNNGC 2 cut(s) 158, 1532
NciI CCSGG 1 cut(s) 1428
NdeII GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
NlaIV GGNNCC 1 cut(s) 1638
NmeAIII GCCGAG 1 cut(s) 1382
NsiI ATGCAT 1 cut(s) 1417
NspI RCATGY 1 cut(s) 305
PagI TCATGA 3 cut(s) 660, 913, 1606
PceI AGGCCT 2 cut(s) 624, 675
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 1 cut(s) 1770
PctI GAATGC 1 cut(s) 1717
PdmI GAANNNNTTC 2 cut(s) 102, 609
PfeI GAWTC 7 cut(s) 605, 865, 1235, 1272, 1361, 1576, 1676
PleI GAGTC 2 cut(s) 1092, 1371
PpsI GAGTC 2 cut(s) 1092, 1371
PsiI TTATAA 1 cut(s) 197
Psp124BI GAGCTC 1 cut(s) 588
Psp1406I AACGTT 1 cut(s) 666
Psp6I CCWGG 2 cut(s) 483, 588
PspGI CCWGG 2 cut(s) 483, 588
PspN4I GGNNCC 1 cut(s) 1638
PsrI GAACNNNNNNTAC 2 cut(s) 704, 736
PstI CTGCAG 1 cut(s) 1168
PsuI RGATCY 2 cut(s) 791, 1789
PvuII CAGCTG 1 cut(s) 1040
RsaI GTAC 4 cut(s) 54, 237, 1090, 1178
RsaNI GTAC 4 cut(s) 53, 236, 1089, 1177
RseI CAYNNNNRTG 1 cut(s) 932
SacI GAGCTC 1 cut(s) 588
SalI GTCGAC 1 cut(s) 1374
SapI GCTCTTC 1 cut(s) 168
Sau3AI GATC 7 cut(s) 273, 410, 499, 791, 910, 1381, 1789
ScaI AGTACT 1 cut(s) 1090
SchI GAGTC 2 cut(s) 1092, 1371
ScrFI CCNGG 3 cut(s) 485, 590, 1428
SduI GDGCHC 1 cut(s) 588
SfaNI GCATC 5 cut(s) 929, 981, 1424, 1465, 1789
SfcI CTRYAG 1 cut(s) 1164
SmiMI CAYNNNNRTG 1 cut(s) 932
SmlI CTYRAG 3 cut(s) 320, 653, 724
SmoI CTYRAG 3 cut(s) 320, 653, 724
SseBI AGGCCT 2 cut(s) 624, 675
SsiI CCGC 1 cut(s) 1532
SspMI CTAG 7 cut(s) 594, 626, 681, 1239, 1539, 1814, 1829
SstI GAGCTC 1 cut(s) 588
StuI AGGCCT 2 cut(s) 624, 675
StyD4I CCNGG 3 cut(s) 483, 588, 1426
StyI CCWWGG 2 cut(s) 1022, 1277
TaaI ACNGT 4 cut(s) 227, 720, 1154, 1519
TaiI ACGT 2 cut(s) 669, 693
TaqI TCGA 7 cut(s) 250, 821, 1375, 1380, 1674, 1764, 1773
TatI WGTACW 4 cut(s) 52, 235, 1088, 1176
TauI GCSGC 1 cut(s) 1535
TfiI GAWTC 7 cut(s) 605, 865, 1235, 1272, 1361, 1576, 1676
TscAI CASTG 1 cut(s) 820
TseI GCWGC 9 cut(s) 265, 332, 737, 832, 835, 1004, 1289, 1526, 1529
TspRI CASTG 1 cut(s) 820
Vha464I CTTAAG 2 cut(s) 320, 724
XapI RAATTY 6 cut(s) 98, 257, 514, 982, 1453, 1744
XbaI TCTAGA 2 cut(s) 1813, 1828
XceI RCATGY 1 cut(s) 305
XcmI CCANNNNNNNNNTGG 1 cut(s) 491
XmiI GTMKAC 2 cut(s) 1375, 1554
XmnI GAANNNNTTC 2 cut(s) 102, 609
XspI CTAG 7 cut(s) 594, 626, 681, 1239, 1539, 1814, 1829
ZrmI AGTACT 1 cut(s) 1090
Zsp2I ATGCAT 1 cut(s) 1417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.