Rh1CG160300
MYB Family

response regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0017706
Physical Location & Seq
Forward (+)
35521761 .. 35538667
16907 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG160300.1

Sequence Viewer

Length: 2010 bp
ATGGTTTTCCAAGGACAATCTGATCCTGTCAAACTTCGTGTACTTGTTATAGGTTATGACCCTACATTTCTGGCCAGTATTTCTGAATTTCTTCGCCTCTTGAACCATCAAGTTTGGACATATACGAACCCATTAATTGCTTTCTCTGCTCTTCGGGTTAGGAGAAACTTTTATGACCTCATTATGACAGACCTTTATCTACCTGATATGGATGGATTTGAAGTCCAGAAAAGGGTTCGAGAAGAATTTAAGCTGCCGTTAATTATGGTTTCGGCCGACGATAGAGAGCATGTCATATTAAAGGCTCTCAAGCTTGGTGCTGCACATTATATAGTCAAACCAGTTTGCTTTGATGATGTGAAAAACCTATGGAAATTTGTTGTCAATGCCGATAGATCACATAAAGAAATTTCTTTTGTTGAGGAAATCGAAAGTGGTGGCGAACAATCAAGTGAGACAAGTACATCTGACGAGGATACAAATGGTGATCATGAGAAAAAGAATTCCAAGAGAAGAAAATCAACAAAGGAAGGCAATGCTCCAAAAAAGGCAAAGTTGACATGGACGCAAGAGCTCCAGGGTCGGTTTCTGGAATCTGTTCATTTTATAGGCCTAGAAAGGGCTGTTCCGAAAACAATTCTTGAGGTCATGAACGTTGAAGGCCTGACTAGAGAAAACGTGGCGAGCCATTTGCAGAAGTATAGACAATTTTTAAGGAGAGTTGCAGTAAAGATTTCAGTAAGTAAATCAGATATTGGTAACAAGTCCCAAACGTCAAGCTATACATTCGGGCAAAGCCAAACTTCGATATTCCAGCAGCAGCCCATTTCTGGACAGAATCTCTCCATAAATCTTATTGCTTCAAGCCTCGGACGTCCCCTTTTTCATGCCAATCACCACGAAGCATCAACCACTTCCGTGCCTCCATTAGGAAACACATCACACTTATATCAACCGAATTCTCTATCACATTTCCAGATGCCGCAACCTGCTTTCATGGGGTACCCAGGGTCTTTCCAACCAGCCAATTACTCATCAGTTAATGGGAGTGGATTTCAGACAAACAATGTTCAAAGCAATTGGTCAAGTGCTAATGAACTCCAAGCTCAAACAAGTCCACTGACCAACCACCTATATGGCAATTACAATAACGATGGCATGAGTACAGGGTTTCAGTTTGGTTCATGGAATGGAACTATGGGATTTCTGAATGATTCTAATAGTCTCATCACCAACAACTACTATGGTGGACTCCCAATGAGTGGTGCTGCTTCTGGAGGGCTAGCTGGATTTAACTCGAATCAAAACCCTAATTTGATGGTGGCGAAATACGGCTGGGCTTCATCAACTAGTGGACTCGATACTAATTTTTTTGGATCGGTTCTGAATGATATTGATCAAAGTGAGCTTCATCAAGAAATGAAAATTACTTCACCAACGGGTAATTTGATGTTCGGTAACAATAATTTTTCAGGCGTGGAGGATGCTTCATCAGTTGGTTTTGGTGGTATTACAACTGTGGAAGCTGCGGCTTCTAGCTCTAATGTTGTAGACGTATCACCAAATCAGAATCAAACCGGCGAGTACTTTGATGAACTTCATGATATCTTATTCAACGATACCAATTTGCAATCTGTCAACCAGGAAGAAGGAAAAGAAGTGGTCAATTTTTATGAGACTAATGCAAATGCGGTTCAAGAAAATGCTTCCTTGCTCAAAGAATCCAACGGCCAGAATTTTAGTAGAGAACTGAACGAAGAACTCGAGTTTGACTGGTTGGATCTATTGGATGCCACAGCAATTCTAGATAATGTCTCCTTAGATGAGGGCTGCCTTTCCCTTTTGGCTGAAGTAGCAACTTCGATAGGGACCAACGCTAAAGCAGATTCATCTTCCTCCTTACTGGATGAAGACCTGGTGTCTGTACCCCTCAATACAATAGACTTGCGGTCTCCTTGTTCTTTGGGACGGAAGAGAGAGCGAGCAACTGAAGGCAGCACAGGAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Myb_DNA-binding Response_reg

Protein Analysis

669

Amino Acids

73.68

Weight (kDa)

5.02

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Response_reg PF00072 14 - 121 2.1e-16 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017706)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g07970
malus_domestica MD02G1229600.v1.1
rosa_chinensis RchiOBHm_Chr1g0341321
rosa_multiflora Rmu_sc0000047.1_g000016 Rmu_sc0037241.1_g000002
rosa_roxburghii Rroxscaffold_4G00311970
rosa_rugosa Rorug01G0157400.1
rosa_samantha Rh1AG172200 Rh1BG140000 Rh1CG160300 Rh1DG172400
rosa_wichuraiana Rw1G014360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 877
Acc36I ACCTGC 1 cut(s) 997
Acc65I GGTACC 1 cut(s) 1002
AccB1I GGYRCC 1 cut(s) 1002
AccB7I CCANNNNNTGG 1 cut(s) 1262
AccI GTMKAC 1 cut(s) 1551
AciI CCGC 4 cut(s) 983, 1529, 1691, 1948
AclI AACGTT 1 cut(s) 654
AclWI GGATC 3 cut(s) 17, 1384, 1788
AcoI YGGCCR 3 cut(s) 72, 273, 1729
AcsI RAATTY 7 cut(s) 86, 245, 374, 408, 502, 958, 1735
AcuI CTGAAG 2 cut(s) 1869, 2010
AcyI GRCGYC 1 cut(s) 874
AfaI GTAC 6 cut(s) 42, 463, 1004, 1165, 1586, 1926
AfiI CCNNNNNNNGG 5 cut(s) 232, 619, 830, 929, 1262
AgsI TTSAA 7 cut(s) 103, 221, 659, 864, 1073, 1615, 1697
AhdI GACNNNNNGTC 2 cut(s) 1918, 1948
AhlI ACTAGT 1 cut(s) 1349
AjnI CCWGG 4 cut(s) 576, 1006, 1641, 1914
AleI CACNNNNGTG 1 cut(s) 917
AluBI AGCT 9 cut(s) 253, 313, 574, 780, 1106, 1286, 1408, 1526, 1539
AluI AGCT 9 cut(s) 253, 313, 574, 780, 1106, 1286, 1408, 1526, 1539
Alw21I GWGCWC 1 cut(s) 576
Alw26I GTCTC 5 cut(s) 449, 1229, 1670, 1819, 1956
AlwI GGATC 3 cut(s) 17, 1384, 1788
Ama87I CYCGRG 1 cut(s) 1763
AoxI GGCC 5 cut(s) 72, 273, 610, 661, 1729
ApeKI GCWGC 8 cut(s) 253, 320, 817, 820, 1268, 1526, 1830, 1995
ApoI RAATTY 7 cut(s) 86, 245, 374, 408, 502, 958, 1735
AseI ATTAAT 1 cut(s) 134
Asp700I GAANNNNTTC 2 cut(s) 90, 597
Asp718I GGTACC 1 cut(s) 1002
AspS9I GGNCC 1 cut(s) 1869
AsuHPI GGTGA 5 cut(s) 497, 887, 1222, 1425, 1551
AsuNHI GCTAGC 1 cut(s) 1282
AvaI CYCGRG 1 cut(s) 1763
AvaII GGWCC 1 cut(s) 1869
BalI TGGCCA 1 cut(s) 74
BanI GGYRCC 1 cut(s) 1002
BanII GRGCYC 1 cut(s) 576
BbsI GAAGAC 1 cut(s) 1917
Bbv12I GWGCWC 1 cut(s) 576
BbvI GCAGC 7 cut(s) 240, 307, 829, 832, 1255, 1513, 1817
BccI CCATC 4 cut(s) 114, 206, 1148, 1312
BceAI ACGGC 3 cut(s) 241, 1348, 1744
BcgI CGANNNNNNTGC 2 cut(s) 673, 707
BciT130I CCWGG 4 cut(s) 578, 1008, 1643, 1916
BciVI GTATCC 1 cut(s) 469
BclI TGATCA 2 cut(s) 487, 1396
BcoDI GTCTC 5 cut(s) 449, 1229, 1670, 1819, 1956
BcuI ACTAGT 1 cut(s) 1349
BfaI CTAG 6 cut(s) 614, 669, 1283, 1350, 1536, 1805
BfuAI ACCTGC 1 cut(s) 997
BfuI GTATCC 1 cut(s) 469
BmcAI AGTACT 1 cut(s) 1586
Bme1390I CCNGG 4 cut(s) 578, 1008, 1643, 1916
Bme18I GGWCC 1 cut(s) 1869
BmeRI GACNNNNNGTC 2 cut(s) 1918, 1948
BmeT110I CYCGRG 1 cut(s) 1763
BmgT120I GGNCC 1 cut(s) 1869
BmiI GGNNCC 2 cut(s) 1004, 1870
BmrFI CCNGG 4 cut(s) 578, 1008, 1643, 1916
BmsI GCATC 4 cut(s) 914, 969, 1474, 1780
BmtI GCTAGC 1 cut(s) 1286
BpiI GAAGAC 1 cut(s) 1917
BpmI CTGGAG 2 cut(s) 560, 1296
BpuEI CTTGAG 2 cut(s) 293, 662
BsaBI GATNNNNATC 1 cut(s) 1395
BsaHI GRCGYC 1 cut(s) 874
BsaI GGTCTC 1 cut(s) 1956
BsaJI CCNNGG 5 cut(s) 10, 577, 868, 1006, 1007
Bsc4I CCNNNNNNNGG 5 cut(s) 232, 619, 830, 929, 1262
Bse118I RCCGGY 1 cut(s) 1577
Bse1I ACTGG 4 cut(s) 75, 341, 1778, 1908
Bse3DI GCAATG 1 cut(s) 541
Bse8I GATNNNNATC 1 cut(s) 1395
BseBI CCWGG 4 cut(s) 578, 1008, 1643, 1916
BseDI CCNNGG 5 cut(s) 10, 577, 868, 1006, 1007
BseGI GGATG 4 cut(s) 217, 1489, 1795, 1912
BseJI GATNNNNATC 1 cut(s) 1395
BseLI CCNNNNNNNGG 5 cut(s) 232, 619, 830, 929, 1262
BseMI GCAATG 1 cut(s) 541
BseNI ACTGG 4 cut(s) 75, 341, 1778, 1908
BseX3I CGGCCG 1 cut(s) 273
BseXI GCAGC 7 cut(s) 240, 307, 829, 832, 1255, 1513, 1817
BseYI CCCAGC 1 cut(s) 1335
BsgI GTGCAG 1 cut(s) 306
Bsh1285I CGRYCG 1 cut(s) 276
BshFI GGCC 5 cut(s) 74, 275, 612, 663, 1731
BshNI GGYRCC 1 cut(s) 1002
BsiEI CGRYCG 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 576
BsiHKCI CYCGRG 1 cut(s) 1763
BsiSI CCGG 1 cut(s) 1578
BslFI GGGAC 4 cut(s) 751, 861, 1882, 1980
BslI CCNNNNNNNGG 5 cut(s) 232, 619, 830, 929, 1262
BsmAI GTCTC 5 cut(s) 449, 1229, 1670, 1819, 1956
BsmFI GGGAC 4 cut(s) 751, 861, 1882, 1980
BsnI GGCC 5 cut(s) 74, 275, 612, 663, 1731
Bso31I GGTCTC 1 cut(s) 1956
BsoBI CYCGRG 1 cut(s) 1763
Bsp1286I GDGCHC 1 cut(s) 576
Bsp143I GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
BspACI CCGC 4 cut(s) 983, 1529, 1691, 1948
BspANI GGCC 5 cut(s) 74, 275, 612, 663, 1731
BspHI TCATGA 3 cut(s) 490, 648, 1600
BspLI GGNNCC 2 cut(s) 1004, 1870
BspMI ACCTGC 1 cut(s) 997
BspOI GCTAGC 1 cut(s) 1286
BspPI GGATC 3 cut(s) 17, 1384, 1788
BspQI GCTCTTC 1 cut(s) 156
BspT107I GGYRCC 1 cut(s) 1002
BspTNI GGTCTC 1 cut(s) 1956
BsrDI GCAATG 1 cut(s) 541
BsrFI RCCGGY 1 cut(s) 1577
BsrI ACTGG 4 cut(s) 75, 341, 1778, 1908
BssAI RCCGGY 1 cut(s) 1577
BssECI CCNNGG 5 cut(s) 10, 577, 868, 1006, 1007
BssMI GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
BssNI GRCGYC 1 cut(s) 874
BssT1I CCWWGG 1 cut(s) 10
Bst2UI CCWGG 4 cut(s) 578, 1008, 1643, 1916
Bst4CI ACNGT 1 cut(s) 1519
Bst6I CTCTTC 2 cut(s) 156, 1967
BstACI GRCGYC 1 cut(s) 874
BstC8I GCNNGC 3 cut(s) 685, 1284, 1983
BstDEI CTNAG 1 cut(s) 1819
BstENI CCTNNNNNAGG 1 cut(s) 927
BstF5I GGATG 4 cut(s) 217, 1489, 1795, 1912
BstKTI GATC 6 cut(s) 25, 398, 490, 1379, 1399, 1783
BstMAI GTCTC 5 cut(s) 449, 1229, 1670, 1819, 1956
BstMBI GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
BstMCI CGRYCG 1 cut(s) 276
BstMWI GCNNNNNNNGC 2 cut(s) 146, 1853
BstNI CCWGG 4 cut(s) 578, 1008, 1643, 1916
BstNSI RCATGY 1 cut(s) 293
BstSCI CCNGG 4 cut(s) 576, 1006, 1641, 1914
BstV1I GCAGC 7 cut(s) 240, 307, 829, 832, 1255, 1513, 1817
BstV2I GAAGAC 1 cut(s) 1917
BstX2I RGATCY 1 cut(s) 1780
BstXI CCANNNNNNTGG 1 cut(s) 1136
BstYI RGATCY 1 cut(s) 1780
BstZI CGGCCG 1 cut(s) 273
BsuI GTATCC 1 cut(s) 469
BsuRI GGCC 5 cut(s) 74, 275, 612, 663, 1731
BtsCI GGATG 4 cut(s) 217, 1489, 1795, 1912
BtsIMutI CAGTG 1 cut(s) 1118
BveI ACCTGC 1 cut(s) 997
Cac8I GCNNGC 3 cut(s) 685, 1284, 1983
CciI TCATGA 3 cut(s) 490, 648, 1600
Cfr10I RCCGGY 1 cut(s) 1577
Cfr13I GGNCC 1 cut(s) 1869
CseI GACGC 1 cut(s) 574
CsiI ACCWGGT 1 cut(s) 1914
Csp6I GTAC 6 cut(s) 41, 462, 1003, 1164, 1585, 1925
CviAII CATG 9 cut(s) 290, 491, 561, 649, 887, 997, 1159, 1185, 1601
CviQI GTAC 6 cut(s) 41, 462, 1003, 1164, 1585, 1925
DdeI CTNAG 1 cut(s) 1819
DpnI GATC 6 cut(s) 24, 397, 489, 1378, 1398, 1782
DpnII GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
DriI GACNNNNNGTC 2 cut(s) 1918, 1948
EaeI YGGCCR 3 cut(s) 72, 273, 1729
EagI CGGCCG 1 cut(s) 273
Eam1104I CTCTTC 2 cut(s) 156, 1967
Eam1105I GACNNNNNGTC 2 cut(s) 1918, 1948
EarI CTCTTC 2 cut(s) 156, 1967
Ecl136II GAGCTC 1 cut(s) 574
EclXI CGGCCG 1 cut(s) 273
Eco130I CCWWGG 1 cut(s) 10
Eco147I AGGCCT 2 cut(s) 612, 663
Eco24I GRGCYC 1 cut(s) 576
Eco31I GGTCTC 1 cut(s) 1956
Eco32I GATATC 1 cut(s) 1606
Eco47I GGWCC 1 cut(s) 1869
Eco52I CGGCCG 1 cut(s) 273
Eco53kI GAGCTC 1 cut(s) 574
Eco57I CTGAAG 2 cut(s) 1869, 2010
Eco88I CYCGRG 1 cut(s) 1763
EcoICRI GAGCTC 1 cut(s) 574
EcoNI CCTNNNNNAGG 1 cut(s) 927
EcoRI GAATTC 2 cut(s) 502, 958
EcoRII CCWGG 4 cut(s) 576, 1006, 1641, 1914
EcoRV GATATC 1 cut(s) 1606
EcoT14I CCWWGG 1 cut(s) 10
EcoT38I GRGCYC 1 cut(s) 576
ErhI CCWWGG 1 cut(s) 10
FaeI CATG 9 cut(s) 293, 494, 564, 652, 890, 1000, 1162, 1188, 1604
FalI AAGNNNNNCTT 2 cut(s) 787, 819
FaqI GGGAC 4 cut(s) 751, 861, 1882, 1980
FatI CATG 9 cut(s) 289, 490, 560, 648, 886, 996, 1158, 1184, 1600
FbaI TGATCA 2 cut(s) 487, 1396
FblI GTMKAC 1 cut(s) 1551
FokI GGATG 4 cut(s) 224, 1496, 1802, 1919
FriOI GRGCYC 1 cut(s) 576
FspBI CTAG 6 cut(s) 614, 669, 1283, 1350, 1536, 1805
GsaI CCCAGC 1 cut(s) 1339
GsuI CTGGAG 2 cut(s) 560, 1296
HaeIII GGCC 5 cut(s) 74, 275, 612, 663, 1731
HapII CCGG 1 cut(s) 1578
HgaI GACGC 1 cut(s) 574
Hin1I GRCGYC 1 cut(s) 874
Hin1II CATG 9 cut(s) 293, 494, 564, 652, 890, 1000, 1162, 1188, 1604
HincII GTYRAC 2 cut(s) 558, 1639
HindII GTYRAC 2 cut(s) 558, 1639
HindIII AAGCTT 1 cut(s) 311
HpaII CCGG 1 cut(s) 1578
HphI GGTGA 5 cut(s) 497, 887, 1222, 1425, 1551
Hpy166II GTNNAC 7 cut(s) 41, 558, 1118, 1250, 1355, 1552, 1639
Hpy8I GTNNAC 7 cut(s) 41, 558, 1118, 1250, 1355, 1552, 1639
Hpy99I CGWCG 1 cut(s) 281
HpyAV CCTTC 4 cut(s) 524, 653, 1643, 1985
HpyCH4III ACNGT 1 cut(s) 1519
HpyCH4IV ACGT 5 cut(s) 654, 678, 773, 874, 1554
HpyCH4V TGCA 5 cut(s) 323, 694, 725, 1630, 1685
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 1853
HpyF3I CTNAG 1 cut(s) 1819
HpySE526I ACGT 5 cut(s) 654, 678, 773, 874, 1554
Hsp92I GRCGYC 1 cut(s) 874
Hsp92II CATG 9 cut(s) 293, 494, 564, 652, 890, 1000, 1162, 1188, 1604
KpnI GGTACC 1 cut(s) 1006
Ksp22I TGATCA 2 cut(s) 487, 1396
Kzo9I GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 2 cut(s) 544, 579
Lsp1109I GCAGC 7 cut(s) 240, 307, 829, 832, 1255, 1513, 1817
LweI GCATC 4 cut(s) 914, 969, 1474, 1780
MabI ACCWGGT 1 cut(s) 1914
MaeI CTAG 6 cut(s) 614, 669, 1283, 1350, 1536, 1805
MaeII ACGT 5 cut(s) 654, 678, 773, 874, 1554
MaeIII GTNAC 2 cut(s) 758, 1457
MalI GATC 6 cut(s) 24, 397, 489, 1378, 1398, 1782
MboI GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
MboII GAAGA 9 cut(s) 83, 143, 254, 525, 1658, 1769, 1884, 1922, 1984
MfeI CAATTG 1 cut(s) 1078
MflI RGATCY 1 cut(s) 1780
MhlI GDGCHC 1 cut(s) 576
MlsI TGGCCA 1 cut(s) 74
MluNI TGGCCA 1 cut(s) 74
MlyI GAGTC 2 cut(s) 1245, 1350
MmeI TCCRAC 3 cut(s) 1042, 1749, 1758
Mox20I TGGCCA 1 cut(s) 74
MroXI GAANNNNTTC 2 cut(s) 90, 597
MscI TGGCCA 1 cut(s) 74
MseI TTAA 7 cut(s) 134, 249, 260, 299, 713, 1041, 1293
MslI CAYNNNNRTG 2 cut(s) 917, 1134
Msp20I TGGCCA 1 cut(s) 74
MspI CCGG 1 cut(s) 1578
MspR9I CCNGG 4 cut(s) 578, 1008, 1643, 1916
MunI CAATTG 1 cut(s) 1078
MvaI CCWGG 4 cut(s) 578, 1008, 1643, 1916
MwoI GCNNNNNNNGC 2 cut(s) 146, 1853
NdeII GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
NheI GCTAGC 1 cut(s) 1282
NlaIII CATG 9 cut(s) 293, 494, 564, 652, 890, 1000, 1162, 1188, 1604
NlaIV GGNNCC 2 cut(s) 1004, 1870
NspI RCATGY 1 cut(s) 293
OliI CACNNNNGTG 1 cut(s) 917
PaeR7I CTCGAG 1 cut(s) 1763
PagI TCATGA 3 cut(s) 490, 648, 1600
PasI CCCWGGG 1 cut(s) 1007
PceI AGGCCT 2 cut(s) 612, 663
PciSI GCTCTTC 1 cut(s) 156
PcsI WCGNNNNNNNCGW 1 cut(s) 1761
PdmI GAANNNNTTC 2 cut(s) 90, 597
PfeI GAWTC 7 cut(s) 593, 838, 1214, 1300, 1570, 1721, 1886
PflMI CCANNNNNTGG 1 cut(s) 1262
PleI GAGTC 2 cut(s) 1245, 1350
PpsI GAGTC 2 cut(s) 1245, 1350
PshBI ATTAAT 1 cut(s) 134
Psp124BI GAGCTC 1 cut(s) 576
Psp1406I AACGTT 1 cut(s) 654
Psp6I CCWGG 4 cut(s) 576, 1006, 1641, 1914
PspFI CCCAGC 1 cut(s) 1335
PspGI CCWGG 4 cut(s) 576, 1006, 1641, 1914
PspN4I GGNNCC 2 cut(s) 1004, 1870
PspPI GGNCC 1 cut(s) 1869
PspXI VCTCGAGB 1 cut(s) 1763
PsuI RGATCY 1 cut(s) 1780
RsaI GTAC 6 cut(s) 42, 463, 1004, 1165, 1586, 1926
RsaNI GTAC 6 cut(s) 41, 462, 1003, 1164, 1585, 1925
RseI CAYNNNNRTG 2 cut(s) 917, 1134
SacI GAGCTC 1 cut(s) 576
SapI GCTCTTC 1 cut(s) 156
SaqAI TTAA 7 cut(s) 134, 249, 260, 299, 713, 1041, 1293
Sau3AI GATC 6 cut(s) 22, 395, 487, 1376, 1396, 1780
Sau96I GGNCC 1 cut(s) 1869
ScaI AGTACT 1 cut(s) 1586
SchI GAGTC 2 cut(s) 1245, 1350
ScrFI CCNGG 4 cut(s) 578, 1008, 1643, 1916
SduI GDGCHC 1 cut(s) 576
SexAI ACCWGGT 1 cut(s) 1914
SfaNI GCATC 4 cut(s) 914, 969, 1474, 1780
Sfr274I CTCGAG 1 cut(s) 1763
SinI GGWCC 1 cut(s) 1869
SlaI CTCGAG 1 cut(s) 1763
SmiMI CAYNNNNRTG 2 cut(s) 917, 1134
SmlI CTYRAG 3 cut(s) 308, 641, 1763
SmoI CTYRAG 3 cut(s) 308, 641, 1763
SpeI ACTAGT 1 cut(s) 1349
SseBI AGGCCT 2 cut(s) 612, 663
SsiI CCGC 4 cut(s) 983, 1529, 1691, 1948
SspMI CTAG 6 cut(s) 614, 669, 1283, 1350, 1536, 1805
SstI GAGCTC 1 cut(s) 576
StuI AGGCCT 2 cut(s) 612, 663
StyD4I CCNGG 4 cut(s) 576, 1006, 1641, 1914
StyI CCWWGG 1 cut(s) 10
TaaI ACNGT 1 cut(s) 1519
TaiI ACGT 5 cut(s) 657, 681, 776, 877, 1557
TaqI TCGA 7 cut(s) 238, 429, 806, 1298, 1359, 1764, 1862
TatI WGTACW 4 cut(s) 40, 461, 1163, 1584
TauI GCSGC 2 cut(s) 985, 1532
TfiI GAWTC 7 cut(s) 593, 838, 1214, 1300, 1570, 1721, 1886
Tru1I TTAA 7 cut(s) 134, 249, 260, 299, 713, 1041, 1293
Tru9I TTAA 7 cut(s) 134, 249, 260, 299, 713, 1041, 1293
TscAI CASTG 1 cut(s) 1125
TseI GCWGC 8 cut(s) 253, 320, 817, 820, 1268, 1526, 1830, 1995
TspGWI ACGGA 2 cut(s) 907, 1984
TspRI CASTG 1 cut(s) 1125
Van91I CCANNNNNTGG 1 cut(s) 1262
VpaK11BI GGWCC 1 cut(s) 1869
VspI ATTAAT 1 cut(s) 134
XagI CCTNNNNNAGG 1 cut(s) 927
XapI RAATTY 7 cut(s) 86, 245, 374, 408, 502, 958, 1735
XbaI TCTAGA 1 cut(s) 1804
XceI RCATGY 1 cut(s) 293
XhoI CTCGAG 1 cut(s) 1763
XmiI GTMKAC 1 cut(s) 1551
XmnI GAANNNNTTC 2 cut(s) 90, 597
XspI CTAG 6 cut(s) 614, 669, 1283, 1350, 1536, 1805
ZraI GACGTC 1 cut(s) 875
ZrmI AGTACT 1 cut(s) 1586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.