isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44970 AT2G44970 AT2G44970 |
| fragaria_vesca | FvH4_7g09500 FvH4_7g09500 FvH4_7g09500 |
| malus_domestica | MD07G1098600.v1.1 |
| prunus_persica | Prupe.2G122700_v2.0.a1 |
| pyrus_communis | pycom07g08130 |
| rosa_chinensis | RchiOBHm_Chr1g0346301 |
| rosa_laevigata | RLG00000028807 |
| rosa_multiflora | Rmu_sc0003363.1_g000040 Rmu_sc0003809.1_g000040 Rmu_sc0037053.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00308730 |
| rosa_rugosa | Rorug01G0178900 Rorug01G0179000 |
| rosa_samantha | Rh1AG198300 Rh1BG164400 Rh1CG183600 Rh1DG195100 |
| rosa_wichuraiana | Rw1G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1264 |
| AccB1I | GGYRCC | 1 cut(s) | 20 |
| AciI | CCGC | 4 cut(s) | 18, 497, 1200, 1348 |
| AclWI | GGATC | 6 cut(s) | 274, 499, 518, 1107, 1329, 1342 |
| AcoI | YGGCCR | 1 cut(s) | 430 |
| AcsI | RAATTY | 6 cut(s) | 307, 388, 570, 723, 782, 1070 |
| AcuI | CTGAAG | 3 cut(s) | 723, 1097, 1392 |
| AcyI | GRCGYC | 2 cut(s) | 21, 41 |
| AfaI | GTAC | 2 cut(s) | 108, 334 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 923, 1411 |
| AgsI | TTSAA | 3 cut(s) | 118, 300, 798 |
| AjnI | CCWGG | 3 cut(s) | 382, 634, 1373 |
| AlwI | GGATC | 6 cut(s) | 274, 499, 518, 1107, 1329, 1342 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 851, 1270 |
| Ama87I | CYCGRG | 1 cut(s) | 756 |
| AoxI | GGCC | 5 cut(s) | 430, 869, 1204, 1349, 1413 |
| ApeKI | GCWGC | 7 cut(s) | 125, 845, 848, 851, 1130, 1244, 1253 |
| ApoI | RAATTY | 6 cut(s) | 307, 388, 570, 723, 782, 1070 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1440 |
| AspLEI | GCGC | 1 cut(s) | 23 |
| AspS9I | GGNCC | 4 cut(s) | 656, 1350, 1366, 1483 |
| AsuC2I | CCSGG | 1 cut(s) | 1332 |
| AsuHPI | GGTGA | 1 cut(s) | 250 |
| AvaI | CYCGRG | 1 cut(s) | 756 |
| AvaII | GGWCC | 3 cut(s) | 656, 1366, 1483 |
| BaeGI | GKGCMC | 1 cut(s) | 1264 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 90, 123 |
| BalI | TGGCCA | 1 cut(s) | 432 |
| BamHI | GGATCC | 1 cut(s) | 1334 |
| BanI | GGYRCC | 1 cut(s) | 20 |
| BanII | GRGCYC | 1 cut(s) | 462 |
| BbsI | GAAGAC | 1 cut(s) | 288 |
| BbvCI | CCTCAGC | 1 cut(s) | 90 |
| BbvI | GCAGC | 7 cut(s) | 112, 835, 838, 857, 1117, 1240, 1256 |
| BccI | CCATC | 7 cut(s) | 71, 356, 419, 504, 610, 1292, 1372 |
| BceAI | ACGGC | 1 cut(s) | 28 |
| BciT130I | CCWGG | 3 cut(s) | 384, 636, 1375 |
| BclI | TGATCA | 3 cut(s) | 61, 286, 1005 |
| BcnI | CCSGG | 1 cut(s) | 1332 |
| BfaI | CTAG | 1 cut(s) | 198 |
| BfmI | CTRYAG | 5 cut(s) | 183, 318, 515, 939, 1271 |
| BfoI | RGCGCY | 1 cut(s) | 24 |
| BfuAI | ACCTGC | 1 cut(s) | 1264 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 438 |
| BisI | GCNGC | 9 cut(s) | 19, 126, 846, 849, 852, 1131, 1245, 1254, 1349 |
| BlsI | GCNGC | 9 cut(s) | 20, 127, 847, 850, 853, 1132, 1246, 1255, 1350 |
| Bme1390I | CCNGG | 4 cut(s) | 384, 636, 1332, 1375 |
| Bme18I | GGWCC | 3 cut(s) | 656, 1366, 1483 |
| BmeT110I | CYCGRG | 1 cut(s) | 756 |
| BmgT120I | GGNCC | 4 cut(s) | 656, 1350, 1366, 1483 |
| BmiI | GGNNCC | 3 cut(s) | 22, 633, 1336 |
| BmrFI | CCNGG | 4 cut(s) | 384, 636, 1332, 1375 |
| BmrI | ACTGGG | 1 cut(s) | 270 |
| BmsI | GCATC | 5 cut(s) | 334, 832, 1221, 1309, 1408 |
| BmuI | ACTGGG | 1 cut(s) | 270 |
| BpiI | GAAGAC | 1 cut(s) | 288 |
| BpmI | CTGGAG | 1 cut(s) | 273 |
| Bpu10I | CCTNAGC | 2 cut(s) | 90, 228 |
| BpuEI | CTTGAG | 1 cut(s) | 1410 |
| BpuMI | CCSGG | 1 cut(s) | 1332 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1004 |
| BsaHI | GRCGYC | 2 cut(s) | 21, 41 |
| BsaJI | CCNNGG | 2 cut(s) | 454, 652 |
| BsaWI | WCCGGW | 1 cut(s) | 1222 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 331, 361, 960, 990 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 923, 1411 |
| Bse1I | ACTGG | 2 cut(s) | 265, 282 |
| Bse3DI | GCAATG | 1 cut(s) | 375 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1004 |
| BseBI | CCWGG | 3 cut(s) | 384, 636, 1375 |
| BseDI | CCNNGG | 2 cut(s) | 454, 652 |
| BseGI | GGATG | 6 cut(s) | 278, 349, 505, 515, 1084, 1383 |
| BseJI | GATNNNNATC | 1 cut(s) | 1004 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 923, 1411 |
| BseMI | GCAATG | 1 cut(s) | 375 |
| BseMII | CTCAG | 5 cut(s) | 68, 104, 155, 242, 1170 |
| BseNI | ACTGG | 2 cut(s) | 265, 282 |
| BseSI | GKGCMC | 1 cut(s) | 1264 |
| BseXI | GCAGC | 7 cut(s) | 112, 835, 838, 857, 1117, 1240, 1256 |
| BseYI | CCCAGC | 1 cut(s) | 1263 |
| BsgI | GTGCAG | 1 cut(s) | 1263 |
| BshFI | GGCC | 5 cut(s) | 432, 871, 1206, 1351, 1415 |
| BshNI | GGYRCC | 1 cut(s) | 20 |
| BsiHKCI | CYCGRG | 1 cut(s) | 756 |
| BsiSI | CCGG | 2 cut(s) | 1223, 1331 |
| BslFI | GGGAC | 2 cut(s) | 900, 972 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 923, 1411 |
| BsmFI | GGGAC | 2 cut(s) | 900, 972 |
| BsnI | GGCC | 5 cut(s) | 432, 871, 1206, 1351, 1415 |
| BsoBI | CYCGRG | 1 cut(s) | 756 |
| Bsp1286I | GDGCHC | 2 cut(s) | 462, 1264 |
| Bsp143I | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| Bsp19I | CCATGG | 1 cut(s) | 652 |
| BspACI | CCGC | 4 cut(s) | 18, 497, 1200, 1348 |
| BspANI | GGCC | 5 cut(s) | 432, 871, 1206, 1351, 1415 |
| BspCNI | CTCAG | 5 cut(s) | 67, 103, 154, 241, 1171 |
| BspLI | GGNNCC | 3 cut(s) | 22, 633, 1336 |
| BspMAI | CTGCAG | 2 cut(s) | 322, 1275 |
| BspMI | ACCTGC | 1 cut(s) | 1264 |
| BspPI | GGATC | 6 cut(s) | 274, 499, 518, 1107, 1329, 1342 |
| BspQI | GCTCTTC | 1 cut(s) | 1446 |
| BspT107I | GGYRCC | 1 cut(s) | 20 |
| BsrDI | GCAATG | 1 cut(s) | 375 |
| BsrI | ACTGG | 2 cut(s) | 265, 282 |
| BssECI | CCNNGG | 2 cut(s) | 454, 652 |
| BssMI | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| BssNI | GRCGYC | 2 cut(s) | 21, 41 |
| BssT1I | CCWWGG | 2 cut(s) | 454, 652 |
| Bst2UI | CCWGG | 3 cut(s) | 384, 636, 1375 |
| Bst4CI | ACNGT | 3 cut(s) | 165, 484, 660 |
| Bst6I | CTCTTC | 3 cut(s) | 1060, 1286, 1446 |
| BstACI | GRCGYC | 2 cut(s) | 21, 41 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 851 |
| BstC8I | GCNNGC | 2 cut(s) | 1035, 1204 |
| BstDEI | CTNAG | 5 cut(s) | 54, 90, 141, 228, 1179 |
| BstDSI | CCRYGG | 1 cut(s) | 652 |
| BstEII | GGTNACC | 1 cut(s) | 238 |
| BstF5I | GGATG | 6 cut(s) | 278, 349, 505, 515, 1084, 1383 |
| BstH2I | RGCGCY | 1 cut(s) | 24 |
| BstHHI | GCGC | 1 cut(s) | 23 |
| BstKTI | GATC | 9 cut(s) | 64, 269, 289, 494, 526, 877, 1008, 1102, 1337 |
| BstMBI | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 438, 851, 1151, 1250, 1253, 1259 |
| BstNI | CCWGG | 3 cut(s) | 384, 636, 1375 |
| BstNSI | RCATGY | 2 cut(s) | 1178, 1314 |
| BstPI | GGTNACC | 1 cut(s) | 238 |
| BstSCI | CCNGG | 4 cut(s) | 382, 634, 1330, 1373 |
| BstSFI | CTRYAG | 5 cut(s) | 183, 318, 515, 939, 1271 |
| BstSLI | GKGCMC | 1 cut(s) | 1264 |
| BstV1I | GCAGC | 7 cut(s) | 112, 835, 838, 857, 1117, 1240, 1256 |
| BstV2I | GAAGAC | 1 cut(s) | 288 |
| BstX2I | RGATCY | 4 cut(s) | 266, 491, 1099, 1334 |
| BstYI | RGATCY | 4 cut(s) | 266, 491, 1099, 1334 |
| BsuRI | GGCC | 5 cut(s) | 432, 871, 1206, 1351, 1415 |
| BtgI | CCRYGG | 1 cut(s) | 652 |
| BtsCI | GGATG | 6 cut(s) | 278, 349, 505, 515, 1084, 1383 |
| BtsIMutI | CAGTG | 3 cut(s) | 170, 171, 289 |
| BveI | ACCTGC | 1 cut(s) | 1264 |
| Cac8I | GCNNGC | 2 cut(s) | 1035, 1204 |
| CaiI | CAGNNNCTG | 2 cut(s) | 851, 1270 |
| CfoI | GCGC | 1 cut(s) | 23 |
| Cfr13I | GGNCC | 4 cut(s) | 656, 1350, 1366, 1483 |
| CseI | GACGC | 2 cut(s) | 49, 282 |
| Csp6I | GTAC | 2 cut(s) | 107, 333 |
| CviAII | CATG | 8 cut(s) | 290, 565, 590, 653, 1175, 1311, 1370, 1487 |
| CviQI | GTAC | 2 cut(s) | 107, 333 |
| DdeI | CTNAG | 5 cut(s) | 54, 90, 141, 228, 1179 |
| DinI | GGCGCC | 1 cut(s) | 22 |
| DpnI | GATC | 9 cut(s) | 63, 268, 288, 493, 525, 876, 1007, 1101, 1336 |
| DpnII | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| EaeI | YGGCCR | 1 cut(s) | 430 |
| Eam1104I | CTCTTC | 3 cut(s) | 1060, 1286, 1446 |
| EarI | CTCTTC | 3 cut(s) | 1060, 1286, 1446 |
| Eco130I | CCWWGG | 2 cut(s) | 454, 652 |
| Eco24I | GRGCYC | 1 cut(s) | 462 |
| Eco32I | GATATC | 2 cut(s) | 583, 946 |
| Eco47I | GGWCC | 3 cut(s) | 656, 1366, 1483 |
| Eco57I | CTGAAG | 3 cut(s) | 723, 1097, 1392 |
| Eco88I | CYCGRG | 1 cut(s) | 756 |
| Eco91I | GGTNACC | 1 cut(s) | 238 |
| EcoO65I | GGTNACC | 1 cut(s) | 238 |
| EcoRII | CCWGG | 3 cut(s) | 382, 634, 1373 |
| EcoRV | GATATC | 2 cut(s) | 583, 946 |
| EcoT14I | CCWWGG | 2 cut(s) | 454, 652 |
| EcoT38I | GRGCYC | 1 cut(s) | 462 |
| EgeI | GGCGCC | 1 cut(s) | 22 |
| EheI | GGCGCC | 1 cut(s) | 22 |
| ErhI | CCWWGG | 2 cut(s) | 454, 652 |
| FaeI | CATG | 8 cut(s) | 293, 568, 593, 656, 1178, 1314, 1373, 1490 |
| FaqI | GGGAC | 2 cut(s) | 900, 972 |
| FatI | CATG | 8 cut(s) | 289, 564, 589, 652, 1174, 1310, 1369, 1486 |
| FauI | CCCGC | 1 cut(s) | 1207 |
| FauNDI | CATATG | 1 cut(s) | 1054 |
| FbaI | TGATCA | 3 cut(s) | 61, 286, 1005 |
| Fnu4HI | GCNGC | 9 cut(s) | 19, 126, 846, 849, 852, 1131, 1245, 1254, 1349 |
| FokI | GGATG | 6 cut(s) | 265, 356, 512, 522, 1071, 1390 |
| FriOI | GRGCYC | 1 cut(s) | 462 |
| Fsp4HI | GCNGC | 9 cut(s) | 19, 126, 846, 849, 852, 1131, 1245, 1254, 1349 |
| FspBI | CTAG | 1 cut(s) | 198 |
| GlaI | GCGC | 1 cut(s) | 22 |
| GluI | GCNGC | 9 cut(s) | 19, 126, 846, 849, 852, 1131, 1245, 1254, 1349 |
| GsaI | CCCAGC | 1 cut(s) | 1267 |
| GsuI | CTGGAG | 1 cut(s) | 273 |
| HaeII | RGCGCY | 1 cut(s) | 24 |
| HaeIII | GGCC | 5 cut(s) | 432, 871, 1206, 1351, 1415 |
| HapII | CCGG | 2 cut(s) | 1223, 1331 |
| HgaI | GACGC | 2 cut(s) | 49, 282 |
| HhaI | GCGC | 1 cut(s) | 23 |
| Hin1I | GRCGYC | 2 cut(s) | 21, 41 |
| Hin1II | CATG | 8 cut(s) | 293, 568, 593, 656, 1178, 1314, 1373, 1490 |
| Hin6I | GCGC | 1 cut(s) | 21 |
| HinP1I | GCGC | 1 cut(s) | 21 |
| HinfI | GANTC | 5 cut(s) | 176, 212, 323, 419, 1000 |
| HpaII | CCGG | 2 cut(s) | 1223, 1331 |
| HphI | GGTGA | 1 cut(s) | 250 |
| Hpy166II | GTNNAC | 2 cut(s) | 598, 979 |
| Hpy188I | TCNGA | 7 cut(s) | 57, 144, 1005, 1077, 1280, 1411, 1446 |
| Hpy188III | TCNNGA | 5 cut(s) | 198, 230, 252, 758, 1040 |
| Hpy8I | GTNNAC | 2 cut(s) | 598, 979 |
| Hpy99I | CGWCG | 1 cut(s) | 43 |
| HpyAV | CCTTC | 3 cut(s) | 201, 546, 1416 |
| HpyCH4III | ACNGT | 3 cut(s) | 165, 484, 660 |
| HpyCH4IV | ACGT | 1 cut(s) | 1357 |
| HpyCH4V | TGCA | 9 cut(s) | 7, 320, 845, 1033, 1244, 1273, 1322, 1396, 1490 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 438, 851, 1151, 1250, 1253, 1259 |
| HpyF3I | CTNAG | 5 cut(s) | 54, 90, 141, 228, 1179 |
| HpySE526I | ACGT | 1 cut(s) | 1357 |
| Hsp92I | GRCGYC | 2 cut(s) | 21, 41 |
| Hsp92II | CATG | 8 cut(s) | 293, 568, 593, 656, 1178, 1314, 1373, 1490 |
| HspAI | GCGC | 1 cut(s) | 21 |
| KasI | GGCGCC | 1 cut(s) | 20 |
| Ksp22I | TGATCA | 3 cut(s) | 61, 286, 1005 |
| Kzo9I | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| LguI | GCTCTTC | 1 cut(s) | 1446 |
| LmnI | GCTCC | 3 cut(s) | 352, 365, 1201 |
| Lsp1109I | GCAGC | 7 cut(s) | 112, 835, 838, 857, 1117, 1240, 1256 |
| LweI | GCATC | 5 cut(s) | 334, 832, 1221, 1309, 1408 |
| MaeI | CTAG | 1 cut(s) | 198 |
| MaeII | ACGT | 1 cut(s) | 1357 |
| MaeIII | GTNAC | 3 cut(s) | 238, 1182, 1306 |
| MalI | GATC | 9 cut(s) | 63, 268, 288, 493, 525, 876, 1007, 1101, 1336 |
| MboI | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| MflI | RGATCY | 4 cut(s) | 266, 491, 1099, 1334 |
| MhlI | GDGCHC | 2 cut(s) | 462, 1264 |
| MlsI | TGGCCA | 1 cut(s) | 432 |
| MluCI | AATT | 8 cut(s) | 233, 307, 388, 570, 723, 782, 1070, 1361 |
| MluNI | TGGCCA | 1 cut(s) | 432 |
| Mly113I | GGCGCC | 1 cut(s) | 21 |
| MlyI | GAGTC | 1 cut(s) | 332 |
| Mox20I | TGGCCA | 1 cut(s) | 432 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1440 |
| MscI | TGGCCA | 1 cut(s) | 432 |
| MseI | TTAA | 3 cut(s) | 68, 879, 1049 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1343 |
| Msp20I | TGGCCA | 1 cut(s) | 432 |
| MspA1I | CMGCKG | 1 cut(s) | 848 |
| MspI | CCGG | 2 cut(s) | 1223, 1331 |
| MspR9I | CCNGG | 4 cut(s) | 384, 636, 1332, 1375 |
| MvaI | CCWGG | 3 cut(s) | 384, 636, 1375 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 438, 851, 1151, 1250, 1253, 1259 |
| NarI | GGCGCC | 1 cut(s) | 21 |
| NciI | CCSGG | 1 cut(s) | 1332 |
| NcoI | CCATGG | 1 cut(s) | 652 |
| NdeI | CATATG | 1 cut(s) | 1054 |
| NdeII | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| NlaIII | CATG | 8 cut(s) | 293, 568, 593, 656, 1178, 1314, 1373, 1490 |
| NlaIV | GGNNCC | 3 cut(s) | 22, 633, 1336 |
| NmuCI | GTSAC | 2 cut(s) | 238, 1306 |
| NspI | RCATGY | 2 cut(s) | 1178, 1314 |
| PaeR7I | CTCGAG | 1 cut(s) | 756 |
| PciSI | GCTCTTC | 1 cut(s) | 1446 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1440 |
| PfeI | GAWTC | 4 cut(s) | 176, 212, 419, 1000 |
| PfoI | TCCNGGA | 2 cut(s) | 382, 1330 |
| PkrI | GCNGC | 9 cut(s) | 20, 127, 847, 850, 853, 1132, 1246, 1255, 1350 |
| PleI | GAGTC | 1 cut(s) | 331 |
| PluTI | GGCGCC | 1 cut(s) | 24 |
| PpsI | GAGTC | 1 cut(s) | 331 |
| Psp6I | CCWGG | 3 cut(s) | 382, 634, 1373 |
| PspEI | GGTNACC | 1 cut(s) | 238 |
| PspFI | CCCAGC | 1 cut(s) | 1263 |
| PspGI | CCWGG | 3 cut(s) | 382, 634, 1373 |
| PspN4I | GGNNCC | 3 cut(s) | 22, 633, 1336 |
| PspPI | GGNCC | 4 cut(s) | 656, 1350, 1366, 1483 |
| PstI | CTGCAG | 2 cut(s) | 322, 1275 |
| PstNI | CAGNNNCTG | 2 cut(s) | 851, 1270 |
| PsuI | RGATCY | 4 cut(s) | 266, 491, 1099, 1334 |
| PvuII | CAGCTG | 1 cut(s) | 848 |
| RsaI | GTAC | 2 cut(s) | 108, 334 |
| RsaNI | GTAC | 2 cut(s) | 107, 333 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1343 |
| SapI | GCTCTTC | 1 cut(s) | 1446 |
| SaqAI | TTAA | 3 cut(s) | 68, 879, 1049 |
| SatI | GCNGC | 9 cut(s) | 19, 126, 846, 849, 852, 1131, 1245, 1254, 1349 |
| Sau3AI | GATC | 9 cut(s) | 61, 266, 286, 491, 523, 874, 1005, 1099, 1334 |
| Sau96I | GGNCC | 4 cut(s) | 656, 1350, 1366, 1483 |
| SchI | GAGTC | 1 cut(s) | 332 |
| ScrFI | CCNGG | 4 cut(s) | 384, 636, 1332, 1375 |
| SduI | GDGCHC | 2 cut(s) | 462, 1264 |
| SfaNI | GCATC | 5 cut(s) | 334, 832, 1221, 1309, 1408 |
| SfcI | CTRYAG | 5 cut(s) | 183, 318, 515, 939, 1271 |
| SfoI | GGCGCC | 1 cut(s) | 22 |
| Sfr274I | CTCGAG | 1 cut(s) | 756 |
| SinI | GGWCC | 3 cut(s) | 656, 1366, 1483 |
| SlaI | CTCGAG | 1 cut(s) | 756 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1343 |
| SmlI | CTYRAG | 2 cut(s) | 756, 1425 |
| SmoI | CTYRAG | 2 cut(s) | 756, 1425 |
| Sse9I | AATT | 8 cut(s) | 233, 307, 388, 570, 723, 782, 1070, 1361 |
| SsiI | CCGC | 4 cut(s) | 18, 497, 1200, 1348 |
| SspDI | GGCGCC | 1 cut(s) | 20 |
| SspMI | CTAG | 1 cut(s) | 198 |
| StyD4I | CCNGG | 4 cut(s) | 382, 634, 1330, 1373 |
| StyI | CCWWGG | 2 cut(s) | 454, 652 |
| TaaI | ACNGT | 3 cut(s) | 165, 484, 660 |
| TaiI | ACGT | 1 cut(s) | 1360 |
| TaqI | TCGA | 3 cut(s) | 353, 614, 757 |
| TasI | AATT | 8 cut(s) | 233, 307, 388, 570, 723, 782, 1070, 1361 |
| TauI | GCSGC | 2 cut(s) | 21, 1351 |
| TfiI | GAWTC | 4 cut(s) | 176, 212, 419, 1000 |
| Tru1I | TTAA | 3 cut(s) | 68, 879, 1049 |
| Tru9I | TTAA | 3 cut(s) | 68, 879, 1049 |
| TscAI | CASTG | 3 cut(s) | 170, 178, 289 |
| TseFI | GTSAC | 2 cut(s) | 238, 1306 |
| TseI | GCWGC | 7 cut(s) | 125, 845, 848, 851, 1130, 1244, 1253 |
| Tsp45I | GTSAC | 2 cut(s) | 238, 1306 |
| TspDTI | ATGAA | 8 cut(s) | 135, 237, 300, 381, 386, 553, 716, 1104 |
| TspGWI | ACGGA | 2 cut(s) | 356, 564 |
| TspRI | CASTG | 3 cut(s) | 170, 178, 289 |
| VpaK11BI | GGWCC | 3 cut(s) | 656, 1366, 1483 |
| XapI | RAATTY | 6 cut(s) | 307, 388, 570, 723, 782, 1070 |
| XbaI | TCTAGA | 1 cut(s) | 197 |
| XceI | RCATGY | 2 cut(s) | 1178, 1314 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1360 |
| XhoI | CTCGAG | 1 cut(s) | 756 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1440 |
| XspI | CTAG | 1 cut(s) | 198 |