isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44970 AT2G44970 AT2G44970 |
| fragaria_vesca | FvH4_7g09500 FvH4_7g09500 FvH4_7g09500 |
| malus_domestica | MD07G1098600.v1.1 |
| prunus_persica | Prupe.2G122700_v2.0.a1 |
| pyrus_communis | pycom07g08130 |
| rosa_chinensis | RchiOBHm_Chr1g0346301 |
| rosa_laevigata | RLG00000028807 |
| rosa_multiflora | Rmu_sc0003363.1_g000040 Rmu_sc0003809.1_g000040 Rmu_sc0037053.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00308730 |
| rosa_rugosa | Rorug01G0178900 Rorug01G0179000 |
| rosa_samantha | Rh1AG198300 Rh1BG164400 Rh1CG183600 Rh1DG195100 |
| rosa_wichuraiana | Rw1G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1358 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 523 |
| Acc36I | ACCTGC | 1 cut(s) | 1477 |
| AccB1I | GGYRCC | 1 cut(s) | 31 |
| AccBSI | CCGCTC | 1 cut(s) | 1475 |
| AccII | CGCG | 1 cut(s) | 37 |
| AciI | CCGC | 7 cut(s) | 29, 35, 37, 110, 779, 1206, 1473 |
| AclWI | GGATC | 4 cut(s) | 800, 1389, 1611, 1624 |
| AcoI | YGGCCR | 2 cut(s) | 530, 712 |
| AcsI | RAATTY | 3 cut(s) | 170, 1064, 1352 |
| AcuI | CTGAAG | 4 cut(s) | 645, 1005, 1428, 1538 |
| AfaI | GTAC | 2 cut(s) | 340, 1667 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1205 |
| AflIII | ACRYGT | 1 cut(s) | 1087 |
| AgsI | TTSAA | 8 cut(s) | 169, 197, 202, 218, 737, 827, 1028, 1162 |
| AjnI | CCWGG | 3 cut(s) | 1320, 1612, 1655 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 708, 740 |
| Alw21I | GWGCWC | 1 cut(s) | 1546 |
| Alw26I | GTCTC | 2 cut(s) | 531, 1753 |
| Alw44I | GTGCAC | 1 cut(s) | 1542 |
| AlwI | GGATC | 4 cut(s) | 800, 1389, 1611, 1624 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 596, 1133 |
| Ama87I | CYCGRG | 1 cut(s) | 1038 |
| AoxI | GGCC | 5 cut(s) | 530, 712, 739, 1151, 1486 |
| ApaLI | GTGCAC | 1 cut(s) | 1542 |
| ApeKI | GCWGC | 9 cut(s) | 370, 401, 1127, 1130, 1133, 1493, 1526, 1535, 1596 |
| ApoI | RAATTY | 3 cut(s) | 170, 1064, 1352 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1074, 1106 |
| AseI | ATTAAT | 1 cut(s) | 248 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 658 |
| AspLEI | GCGC | 1 cut(s) | 1456 |
| AspS9I | GGNCC | 1 cut(s) | 938 |
| AsuC2I | CCSGG | 1 cut(s) | 918 |
| AsuHPI | GGTGA | 3 cut(s) | 526, 1262, 1319 |
| AsuII | TTCGAA | 1 cut(s) | 757 |
| AvaI | CYCGRG | 1 cut(s) | 1038 |
| AvaII | GGWCC | 1 cut(s) | 938 |
| BaeGI | GKGCMC | 1 cut(s) | 1546 |
| BalI | TGGCCA | 1 cut(s) | 714 |
| BamHI | GGATCC | 1 cut(s) | 1616 |
| BanI | GGYRCC | 1 cut(s) | 31 |
| BauI | CACGAG | 1 cut(s) | 1446 |
| BbsI | GAAGAC | 2 cut(s) | 564, 834 |
| Bbv12I | GWGCWC | 1 cut(s) | 1546 |
| BbvCI | CCTCAGC | 1 cut(s) | 366 |
| BbvI | GCAGC | 9 cut(s) | 357, 388, 1120, 1139, 1142, 1505, 1522, 1538, 1583 |
| BccI | CCATC | 8 cut(s) | 284, 347, 635, 698, 786, 892, 1574, 1654 |
| BceAI | ACGGC | 2 cut(s) | 342, 847 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1451, 1485, 1682, 1716 |
| BciT130I | CCWGG | 3 cut(s) | 1322, 1614, 1657 |
| BciVI | GTATCC | 1 cut(s) | 575 |
| BcnI | CCSGG | 1 cut(s) | 918 |
| BcoDI | GTCTC | 2 cut(s) | 531, 1753 |
| BfaI | CTAG | 4 cut(s) | 474, 576, 609, 684 |
| BfmI | CTRYAG | 7 cut(s) | 144, 459, 597, 633, 797, 1221, 1482 |
| BfuAI | ACCTGC | 1 cut(s) | 1477 |
| BfuI | GTATCC | 1 cut(s) | 575 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 720, 1181 |
| Bme1390I | CCNGG | 4 cut(s) | 918, 1322, 1614, 1657 |
| Bme18I | GGWCC | 1 cut(s) | 938 |
| BmeT110I | CYCGRG | 1 cut(s) | 1038 |
| BmgT120I | GGNCC | 1 cut(s) | 938 |
| BmiI | GGNNCC | 4 cut(s) | 33, 915, 1078, 1618 |
| BmrFI | CCNGG | 4 cut(s) | 918, 1322, 1614, 1657 |
| BmrI | ACTGGG | 1 cut(s) | 989 |
| BmsI | GCATC | 6 cut(s) | 388, 602, 613, 1114, 1591, 1690 |
| BmuI | ACTGGG | 1 cut(s) | 989 |
| BpiI | GAAGAC | 2 cut(s) | 564, 834 |
| Bpu10I | CCTNAGC | 2 cut(s) | 366, 504 |
| Bpu14I | TTCGAA | 1 cut(s) | 757 |
| BpuEI | CTTGAG | 1 cut(s) | 1692 |
| BpuMI | CCSGG | 1 cut(s) | 918 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1286 |
| BsaI | GGTCTC | 1 cut(s) | 531 |
| BsaJI | CCNNGG | 4 cut(s) | 35, 934, 1320, 1519 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 610, 640, 1396, 1426 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1205 |
| Bse118I | RCCGGY | 1 cut(s) | 1175 |
| Bse1I | ACTGG | 2 cut(s) | 984, 1505 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1286 |
| BseBI | CCWGG | 3 cut(s) | 1322, 1614, 1657 |
| BseDI | CCNNGG | 4 cut(s) | 35, 934, 1320, 1519 |
| BseGI | GGATG | 3 cut(s) | 787, 797, 1665 |
| BseJI | GATNNNNATC | 1 cut(s) | 1286 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1205 |
| BseMII | CTCAG | 5 cut(s) | 344, 380, 393, 431, 518 |
| BseNI | ACTGG | 2 cut(s) | 984, 1505 |
| BseSI | GKGCMC | 1 cut(s) | 1546 |
| BseXI | GCAGC | 9 cut(s) | 357, 388, 1120, 1139, 1142, 1505, 1522, 1538, 1583 |
| BseYI | CCCAGC | 1 cut(s) | 1745 |
| BsgI | GTGCAG | 1 cut(s) | 1545 |
| Bsh1236I | CGCG | 1 cut(s) | 37 |
| BshFI | GGCC | 5 cut(s) | 532, 714, 741, 1153, 1488 |
| BshNI | GGYRCC | 1 cut(s) | 31 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1546 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1038 |
| BsiSI | CCGG | 2 cut(s) | 917, 1176 |
| BslFI | GGGAC | 2 cut(s) | 1116, 1254 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1205 |
| BsmAI | GTCTC | 2 cut(s) | 531, 1753 |
| BsmFI | GGGAC | 2 cut(s) | 1116, 1254 |
| BsmI | GAATGC | 1 cut(s) | 723 |
| BsnI | GGCC | 5 cut(s) | 532, 714, 741, 1153, 1488 |
| Bso31I | GGTCTC | 1 cut(s) | 531 |
| BsoBI | CYCGRG | 1 cut(s) | 1038 |
| Bsp119I | TTCGAA | 1 cut(s) | 757 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1546 |
| Bsp143I | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| Bsp19I | CCATGG | 1 cut(s) | 934 |
| BspACI | CCGC | 7 cut(s) | 29, 35, 37, 110, 779, 1206, 1473 |
| BspANI | GGCC | 5 cut(s) | 532, 714, 741, 1153, 1488 |
| BspCNI | CTCAG | 5 cut(s) | 343, 379, 392, 430, 517 |
| BspFNI | CGCG | 1 cut(s) | 37 |
| BspLI | GGNNCC | 4 cut(s) | 33, 915, 1078, 1618 |
| BspMAI | CTGCAG | 3 cut(s) | 148, 601, 1486 |
| BspMI | ACCTGC | 1 cut(s) | 1477 |
| BspPI | GGATC | 4 cut(s) | 800, 1389, 1611, 1624 |
| BspT104I | TTCGAA | 1 cut(s) | 757 |
| BspT107I | GGYRCC | 1 cut(s) | 31 |
| BspTNI | GGTCTC | 1 cut(s) | 531 |
| BsrBI | CCGCTC | 1 cut(s) | 1475 |
| BsrFI | RCCGGY | 1 cut(s) | 1175 |
| BsrI | ACTGG | 2 cut(s) | 984, 1505 |
| BssAI | RCCGGY | 1 cut(s) | 1175 |
| BssECI | CCNNGG | 4 cut(s) | 35, 934, 1320, 1519 |
| BssMI | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| BssSI | CACGAG | 1 cut(s) | 1446 |
| BssT1I | CCWWGG | 2 cut(s) | 934, 1519 |
| Bst2BI | CACGAG | 1 cut(s) | 1446 |
| Bst2UI | CCWGG | 3 cut(s) | 1322, 1614, 1657 |
| Bst4CI | ACNGT | 3 cut(s) | 321, 649, 766 |
| Bst6I | CTCTTC | 2 cut(s) | 1342, 1568 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 623, 1133 |
| BstBI | TTCGAA | 1 cut(s) | 757 |
| BstC8I | GCNNGC | 4 cut(s) | 387, 1317, 1458, 1486 |
| BstDEI | CTNAG | 5 cut(s) | 330, 366, 379, 417, 504 |
| BstDSI | CCRYGG | 2 cut(s) | 35, 934 |
| BstEII | GGTNACC | 1 cut(s) | 514 |
| BstF5I | GGATG | 3 cut(s) | 787, 797, 1665 |
| BstFNI | CGCG | 1 cut(s) | 37 |
| BstHHI | GCGC | 1 cut(s) | 1456 |
| BstKTI | GATC | 5 cut(s) | 751, 808, 1290, 1384, 1619 |
| BstMAI | GTCTC | 2 cut(s) | 531, 1753 |
| BstMBI | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| BstNI | CCWGG | 3 cut(s) | 1322, 1614, 1657 |
| BstNSI | RCATGY | 3 cut(s) | 503, 1460, 1596 |
| BstPI | GGTNACC | 1 cut(s) | 514 |
| BstSCI | CCNGG | 4 cut(s) | 916, 1320, 1612, 1655 |
| BstSFI | CTRYAG | 7 cut(s) | 144, 459, 597, 633, 797, 1221, 1482 |
| BstSLI | GKGCMC | 1 cut(s) | 1546 |
| BstUI | CGCG | 1 cut(s) | 37 |
| BstV1I | GCAGC | 9 cut(s) | 357, 388, 1120, 1139, 1142, 1505, 1522, 1538, 1583 |
| BstV2I | GAAGAC | 2 cut(s) | 564, 834 |
| BstX2I | RGATCY | 2 cut(s) | 1381, 1616 |
| BstYI | RGATCY | 2 cut(s) | 1381, 1616 |
| BsuI | GTATCC | 1 cut(s) | 575 |
| BsuRI | GGCC | 5 cut(s) | 532, 714, 741, 1153, 1488 |
| BtgI | CCRYGG | 2 cut(s) | 35, 934 |
| BtgZI | GCGATG | 2 cut(s) | 576, 1614 |
| BtsCI | GGATG | 3 cut(s) | 787, 797, 1665 |
| BtsIMutI | CAGTG | 6 cut(s) | 387, 447, 654, 834, 1404, 1512 |
| BveI | ACCTGC | 1 cut(s) | 1477 |
| Cac8I | GCNNGC | 4 cut(s) | 387, 1317, 1458, 1486 |
| CaiI | CAGNNNCTG | 2 cut(s) | 596, 1133 |
| CfoI | GCGC | 1 cut(s) | 1456 |
| Cfr10I | RCCGGY | 1 cut(s) | 1175 |
| Cfr13I | GGNCC | 1 cut(s) | 938 |
| Cfr42I | CCGCGG | 1 cut(s) | 38 |
| CseI | GACGC | 1 cut(s) | 1619 |
| Csp6I | GTAC | 2 cut(s) | 339, 1666 |
| CviAII | CATG | 8 cut(s) | 500, 847, 872, 935, 1398, 1457, 1593, 1652 |
| CviQI | GTAC | 2 cut(s) | 339, 1666 |
| DdeI | CTNAG | 5 cut(s) | 330, 366, 379, 417, 504 |
| DpnI | GATC | 5 cut(s) | 750, 807, 1289, 1383, 1618 |
| DpnII | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 523 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 523 |
| EaeI | YGGCCR | 2 cut(s) | 530, 712 |
| Eam1104I | CTCTTC | 2 cut(s) | 1342, 1568 |
| EarI | CTCTTC | 2 cut(s) | 1342, 1568 |
| EciI | GGCGGA | 1 cut(s) | 794 |
| Eco130I | CCWWGG | 2 cut(s) | 934, 1519 |
| Eco147I | AGGCCT | 1 cut(s) | 741 |
| Eco31I | GGTCTC | 1 cut(s) | 531 |
| Eco32I | GATATC | 2 cut(s) | 865, 1228 |
| Eco47I | GGWCC | 1 cut(s) | 938 |
| Eco57I | CTGAAG | 4 cut(s) | 645, 1005, 1428, 1538 |
| Eco88I | CYCGRG | 1 cut(s) | 1038 |
| Eco91I | GGTNACC | 1 cut(s) | 514 |
| EcoO65I | GGTNACC | 1 cut(s) | 514 |
| EcoRII | CCWGG | 3 cut(s) | 1320, 1612, 1655 |
| EcoRV | GATATC | 2 cut(s) | 865, 1228 |
| EcoT14I | CCWWGG | 2 cut(s) | 934, 1519 |
| ErhI | CCWWGG | 2 cut(s) | 934, 1519 |
| FaeI | CATG | 8 cut(s) | 503, 850, 875, 938, 1401, 1460, 1596, 1655 |
| FaqI | GGGAC | 2 cut(s) | 1116, 1254 |
| FatI | CATG | 8 cut(s) | 499, 846, 871, 934, 1397, 1456, 1592, 1651 |
| FauNDI | CATATG | 1 cut(s) | 1201 |
| FokI | GGATG | 3 cut(s) | 794, 804, 1672 |
| FspBI | CTAG | 4 cut(s) | 474, 576, 609, 684 |
| GlaI | GCGC | 1 cut(s) | 1455 |
| GsaI | CCCAGC | 1 cut(s) | 1749 |
| HaeIII | GGCC | 5 cut(s) | 532, 714, 741, 1153, 1488 |
| HapII | CCGG | 2 cut(s) | 917, 1176 |
| HgaI | GACGC | 1 cut(s) | 1619 |
| HhaI | GCGC | 1 cut(s) | 1456 |
| Hin1II | CATG | 8 cut(s) | 503, 850, 875, 938, 1401, 1460, 1596, 1655 |
| Hin6I | GCGC | 1 cut(s) | 1454 |
| HinP1I | GCGC | 1 cut(s) | 1454 |
| HincII | GTYRAC | 1 cut(s) | 324 |
| HindII | GTYRAC | 1 cut(s) | 324 |
| HinfI | GANTC | 6 cut(s) | 239, 479, 602, 668, 1006, 1195 |
| HpaII | CCGG | 2 cut(s) | 917, 1176 |
| HphI | GGTGA | 3 cut(s) | 526, 1262, 1319 |
| Hpy166II | GTNNAC | 5 cut(s) | 324, 880, 1261, 1544, 1666 |
| Hpy188III | TCNNGA | 4 cut(s) | 265, 506, 675, 1040 |
| Hpy8I | GTNNAC | 5 cut(s) | 324, 880, 1261, 1544, 1666 |
| Hpy99I | CGWCG | 1 cut(s) | 69 |
| HpyAV | CCTTC | 2 cut(s) | 477, 1698 |
| HpyCH4III | ACNGT | 3 cut(s) | 321, 649, 766 |
| HpyCH4IV | ACGT | 3 cut(s) | 67, 1087, 1730 |
| HpyF3I | CTNAG | 5 cut(s) | 330, 366, 379, 417, 504 |
| HpySE526I | ACGT | 3 cut(s) | 67, 1087, 1730 |
| Hsp92II | CATG | 8 cut(s) | 503, 850, 875, 938, 1401, 1460, 1596, 1655 |
| HspAI | GCGC | 1 cut(s) | 1454 |
| KspI | CCGCGG | 1 cut(s) | 38 |
| Kzo9I | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| LmnI | GCTCC | 2 cut(s) | 631, 1417 |
| Lsp1109I | GCAGC | 9 cut(s) | 357, 388, 1120, 1139, 1142, 1505, 1522, 1538, 1583 |
| LweI | GCATC | 6 cut(s) | 388, 602, 613, 1114, 1591, 1690 |
| MaeI | CTAG | 4 cut(s) | 474, 576, 609, 684 |
| MaeII | ACGT | 3 cut(s) | 67, 1087, 1730 |
| MaeIII | GTNAC | 2 cut(s) | 514, 1588 |
| MalI | GATC | 5 cut(s) | 750, 807, 1289, 1383, 1618 |
| MbiI | CCGCTC | 1 cut(s) | 1475 |
| MboI | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| MboII | GAAGA | 9 cut(s) | 161, 462, 564, 651, 839, 1337, 1359, 1544, 1585 |
| MflI | RGATCY | 2 cut(s) | 1381, 1616 |
| MhlI | GDGCHC | 1 cut(s) | 1546 |
| MlsI | TGGCCA | 1 cut(s) | 714 |
| MluNI | TGGCCA | 1 cut(s) | 714 |
| MlyI | GAGTC | 2 cut(s) | 611, 1204 |
| MmeI | TCCRAC | 1 cut(s) | 833 |
| Mox20I | TGGCCA | 1 cut(s) | 714 |
| MroXI | GAANNNNTTC | 1 cut(s) | 658 |
| MscI | TGGCCA | 1 cut(s) | 714 |
| MseI | TTAA | 2 cut(s) | 248, 1302 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1625, 1767 |
| Msp20I | TGGCCA | 1 cut(s) | 714 |
| MspA1I | CMGCKG | 3 cut(s) | 37, 370, 1133 |
| MspI | CCGG | 2 cut(s) | 917, 1176 |
| MspR9I | CCNGG | 4 cut(s) | 918, 1322, 1614, 1657 |
| Mva1269I | GAATGC | 1 cut(s) | 723 |
| MvaI | CCWGG | 3 cut(s) | 1322, 1614, 1657 |
| MvnI | CGCG | 1 cut(s) | 37 |
| NciI | CCSGG | 1 cut(s) | 918 |
| NcoI | CCATGG | 1 cut(s) | 934 |
| NdeI | CATATG | 1 cut(s) | 1201 |
| NdeII | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| NlaIII | CATG | 8 cut(s) | 503, 850, 875, 938, 1401, 1460, 1596, 1655 |
| NlaIV | GGNNCC | 4 cut(s) | 33, 915, 1078, 1618 |
| NmeAIII | GCCGAG | 2 cut(s) | 508, 1486 |
| NmuCI | GTSAC | 2 cut(s) | 514, 1588 |
| NspI | RCATGY | 3 cut(s) | 503, 1460, 1596 |
| NspV | TTCGAA | 1 cut(s) | 757 |
| PaeI | GCATGC | 1 cut(s) | 1460 |
| PaeR7I | CTCGAG | 1 cut(s) | 1038 |
| PceI | AGGCCT | 1 cut(s) | 741 |
| PctI | GAATGC | 1 cut(s) | 723 |
| PdmI | GAANNNNTTC | 1 cut(s) | 658 |
| PfeI | GAWTC | 4 cut(s) | 239, 479, 668, 1006 |
| PfoI | TCCNGGA | 1 cut(s) | 1612 |
| PleI | GAGTC | 2 cut(s) | 610, 1203 |
| PpsI | GAGTC | 2 cut(s) | 610, 1203 |
| PshBI | ATTAAT | 1 cut(s) | 248 |
| PsiI | TTATAA | 1 cut(s) | 1358 |
| Psp6I | CCWGG | 3 cut(s) | 1320, 1612, 1655 |
| PspEI | GGTNACC | 1 cut(s) | 514 |
| PspFI | CCCAGC | 1 cut(s) | 1745 |
| PspGI | CCWGG | 3 cut(s) | 1320, 1612, 1655 |
| PspN4I | GGNNCC | 4 cut(s) | 33, 915, 1078, 1618 |
| PspPI | GGNCC | 1 cut(s) | 938 |
| PstI | CTGCAG | 3 cut(s) | 148, 601, 1486 |
| PstNI | CAGNNNCTG | 2 cut(s) | 596, 1133 |
| PsuI | RGATCY | 2 cut(s) | 1381, 1616 |
| PvuII | CAGCTG | 2 cut(s) | 370, 1133 |
| RsaI | GTAC | 2 cut(s) | 340, 1667 |
| RsaNI | GTAC | 2 cut(s) | 339, 1666 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1625, 1767 |
| SacII | CCGCGG | 1 cut(s) | 38 |
| SaqAI | TTAA | 2 cut(s) | 248, 1302 |
| Sau3AI | GATC | 5 cut(s) | 748, 805, 1287, 1381, 1616 |
| Sau96I | GGNCC | 1 cut(s) | 938 |
| SchI | GAGTC | 2 cut(s) | 611, 1204 |
| ScrFI | CCNGG | 4 cut(s) | 918, 1322, 1614, 1657 |
| SduI | GDGCHC | 1 cut(s) | 1546 |
| SfaNI | GCATC | 6 cut(s) | 388, 602, 613, 1114, 1591, 1690 |
| SfcI | CTRYAG | 7 cut(s) | 144, 459, 597, 633, 797, 1221, 1482 |
| Sfr274I | CTCGAG | 1 cut(s) | 1038 |
| Sfr303I | CCGCGG | 1 cut(s) | 38 |
| SfuI | TTCGAA | 1 cut(s) | 757 |
| SgrBI | CCGCGG | 1 cut(s) | 38 |
| SinI | GGWCC | 1 cut(s) | 938 |
| SlaI | CTCGAG | 1 cut(s) | 1038 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1625, 1767 |
| SmlI | CTYRAG | 2 cut(s) | 1038, 1707 |
| SmoI | CTYRAG | 2 cut(s) | 1038, 1707 |
| SphI | GCATGC | 1 cut(s) | 1460 |
| SseBI | AGGCCT | 1 cut(s) | 741 |
| SsiI | CCGC | 7 cut(s) | 29, 35, 37, 110, 779, 1206, 1473 |
| SspI | AATATT | 1 cut(s) | 230 |
| SspMI | CTAG | 4 cut(s) | 474, 576, 609, 684 |
| StuI | AGGCCT | 1 cut(s) | 741 |
| StyD4I | CCNGG | 4 cut(s) | 916, 1320, 1612, 1655 |
| StyI | CCWWGG | 2 cut(s) | 934, 1519 |
| TaaI | ACNGT | 3 cut(s) | 321, 649, 766 |
| TaiI | ACGT | 3 cut(s) | 70, 1090, 1733 |
| TaqI | TCGA | 5 cut(s) | 751, 757, 896, 1039, 1740 |
| TatI | WGTACW | 1 cut(s) | 1665 |
| TauI | GCSGC | 3 cut(s) | 37, 112, 1475 |
| TfiI | GAWTC | 4 cut(s) | 239, 479, 668, 1006 |
| Tru1I | TTAA | 2 cut(s) | 248, 1302 |
| Tru9I | TTAA | 2 cut(s) | 248, 1302 |
| TscAI | CASTG | 6 cut(s) | 387, 454, 654, 841, 1411, 1512 |
| TseFI | GTSAC | 2 cut(s) | 514, 1588 |
| TseI | GCWGC | 9 cut(s) | 370, 401, 1127, 1130, 1133, 1493, 1526, 1535, 1596 |
| Tsp45I | GTSAC | 2 cut(s) | 514, 1588 |
| TspDTI | ATGAA | 6 cut(s) | 222, 417, 660, 835, 998, 1386 |
| TspRI | CASTG | 6 cut(s) | 387, 454, 654, 841, 1411, 1512 |
| VneI | GTGCAC | 1 cut(s) | 1542 |
| VpaK11BI | GGWCC | 1 cut(s) | 938 |
| VspI | ATTAAT | 1 cut(s) | 248 |
| XapI | RAATTY | 3 cut(s) | 170, 1064, 1352 |
| XceI | RCATGY | 3 cut(s) | 503, 1460, 1596 |
| XhoI | CTCGAG | 1 cut(s) | 1038 |
| XmnI | GAANNNNTTC | 1 cut(s) | 658 |
| XspI | CTAG | 4 cut(s) | 474, 576, 609, 684 |