Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0008546

Physical Location & Seq

Genomic Coordinates Reverse (-)

9447021 .. 9449403

Gene Structure 2383 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g09950.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGAGTGAAATACTCGATTGTATCACCTGTTACACTCTAGGCATGGTCCCTACCCCTCCCACCAGCGCTTTTGTCAGTTTGTGTAAACAAACCATAACAGAAATAACGGCAATTCAAAATCACAAAGAAGGGCGCCAGTGCATAAGAATGAAAGACCAACTATGGAGATGGAGCTCCTTAGAAAGAAAATGCCTATACCTTCTCCAACAATGCACCAACACTTCACCACGCTCTCTCCTCCAAATCCACGCCTTCATGCTCCGAAACGCCCTCGAAACCAACCTCAATCTCCTCACCAAATTCATCACCACCTGCTCCTCCTCCTCCTCCCCCTCCCAACTCATCAAACACGCCCGCCGCGTCTTCGATCGGCAACCCAATAGAAACGACACATTCCTCTGCAATGCGATCATCAAAGCCCACATTGCCGAATCCGCCGAGTCTTTTGCGCTTTATAGAACTCTCAGGCGCATGGATTTCGAGCCGGATGGGTATACTTTTACTGCTCTGGCCAAGTCGTGTGGGTTAGATGGGGCAAGATTGGAGGGGGAGGTGATTCACTGTCATGCTGTTAAGACTGGGTTGTGTTTGGATTTGTATGTTTCGACGGCTTTCGTTGACATGTATGTGAAGTTTGGGAGGATTGGCTGTGCGCGGAAGGTGTTCGATGAAATGACTGAGAGAAATCGAGTGTCGTGGACGGCGCTTATTTGCGGGTATGCGAGAGCGGGAGATATGGGTGGTGCGAGGAGGTTGTTTGATGAGATGCCCGAGAGGGACTCGGCTGCGTTTAATGCGTTGATTGATGGATATGTCAAGGTGGGAGAAATGGGTTTGGCTCGGAGTTTGTTTGATGAGATGAGGGATCGGAATGTGGTGAGTTGGACTAGTATGATATATGGGTACTGCCATCGAGGTGATGTAGGGGCCGCTAAATCGTTTTTTGATTCTATGCCGAAGAAGAATCTTGTTTCTTGGAATGTGATGATTGGTGGTTATTGCCAGAACAAACAGCCCCATGAAGCCGTGAGATTGTTTCATGAAATGCAGTCAAGTACGTCCCTTGAACCGGATGCTGTAACGATTGTGAGCATTCTTCCAGCTATAGCTGATTTGGGTGCTTTGGATTTAGGACATTGGGTTCACGAGTTTGTAGAGAGGAAGAAACTTGATAAGCTGACCAATATATACACTGCGCTTGTGGATATGTATGCTAAATGTGGTGAAATTACAAAGGCCAGAAAACTCTTTGATGAGATGCCTGAAAAAGAAACGGCTTCTTGGAATGCTTTGATAAATGGGTTTGCAGTCAATGGCCATGGAAAGGAGGCACTAGAAGTATTTTCAGAGATGCAACGGGGGAAGTATGAGCCGAACAATATAACCTTTCTCAGTGTTCTGTCCGCTTGTAACCATTGTGGTCTGGTAGAGGAAGGGAGATTTTGGTTTAAGAAAATGGAGAACTTTGGGCTCATTCCACAGATTGAGCATTATGGTTGCATGGTAGATCTTTTAGGAAGGGCAGGGTGCTTGGAGGAAACTGAAAAGTTGATCAAGAGCATGCCTTACGATGTTAATGGGATAATTTTGAGTTCCTTTCTTTTTGCATGTGGGTATTATGAGGATGTCACGAGAGCCAACAAAATTTTAGAGTTGGCTGTCAAACTGGAGCCATGGAATGATGGAAATTATGTCATATTGAGAAACTTGTATGCCAGAAAGAGAAGGTGGAGTGATGCAGATGATATTAAGAGTTTGATGCGGAAGAATCAAGCAGATAAAGAAGTTGGTTGTAGTTTTATAGAGGTTGATGGTAGAATCAAGGAGTTTGTGGCTGGGGACAGGATGAACACATCTATGGAAGCTATACATATGACTTTGCTGCAGAGTTGGAAGCACATGATGGGACAAGTGCCATGTTCTATAGCTATGGTGTGCCTTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

649

Amino Acids

73.39

Weight (kDa)

7.18

Isoelectric Point (pI)

44.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	229 - 259	9.2e-06	PPR repeat family
PPR	PF01535	231 - 259	2.1e-07	PPR repeat
PPR_2	PF13041	260 - 292	6e-07	PPR repeat family
PPR	PF01535	263 - 292	1.2e-06	PPR repeat
PPR_2	PF13041	290 - 322	6e-07	PPR repeat family
PPR	PF01535	293 - 322	1.2e-06	PPR repeat
PPR_2	PF13041	322 - 366	3e-11	PPR repeat family
PPR_1	PF12854	322 - 350	2.6e-06	PPR repeat
PPR	PF01535	324 - 351	2.7e-09	PPR repeat
PPR_2	PF13041	425 - 470	2.3e-11	PPR repeat family
PPR	PF01535	427 - 453	1.8e-07	PPR repeat
E_motif	PF20431	540 - 602	5.8e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008546)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44880 AT2G44880 AT2G44880 AT2G44880 AT2G44880 AT2G44880
fragaria_vesca	FvH4_7g09950
malus_domestica	MD07G1104700.v1.1 MD07G1105400.v1.1
prunus_persica	Prupe.2G128300_v2.0.a1
pyrus_communis	pycom07g08960
rosa_chinensis	RchiOBHm_Chr1g0347511 RchiOBHm_Chr1g0347541
rosa_laevigata	RLG00000028745
rosa_multiflora	Rmu_ssc0000280.1_g000005
rosa_roxburghii	Rroxscaffold_4G00307740
rosa_rugosa	Rorug01G0187500
rosa_samantha	Rh1AG204700 Rh1BG170500 Rh1CG189800 Rh1DG200800
rosa_wichuraiana	Rw0G013630 Rw1G017180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	320
Acc36I	ACCTGC	1 cut(s)	320
AccB1I	GGYRCC	1 cut(s)	132
AccBSI	CCGCTC	1 cut(s)	728
AccI	GTMKAC	1 cut(s)	494
AccII	CGCG	2 cut(s)	360, 655
AciI	CCGC	9 cut(s)	355, 358, 435, 655, 714, 728, 930, 1404, 1762
AclWI	GGATC	1 cut(s)	873
AcoI	YGGCCR	2 cut(s)	510, 1315
AcsI	RAATTY	2 cut(s)	299, 1644
AcyI	GRCGYC	1 cut(s)	133
AfaI	GTAC	2 cut(s)	905, 1057
AfeI	AGCGCT	1 cut(s)	67
AfiI	CCNNNNNNNGG	2 cut(s)	1069, 1324
AflIII	ACRYGT	1 cut(s)	621
AgsI	TTSAA	2 cut(s)	116, 1067
AhlI	ACTAGT	1 cut(s)	887
AloI	GAACNNNNNNTCC	2 cut(s)	1125, 1157
AluBI	AGCT	6 cut(s)	174, 1103, 1109, 1177, 1865, 1928
AluI	AGCT	6 cut(s)	174, 1103, 1109, 1177, 1865, 1928
Alw21I	GWGCWC	1 cut(s)	176
AlwI	GGATC	1 cut(s)	873
Ama87I	CYCGRG	1 cut(s)	770
Aor51HI	AGCGCT	1 cut(s)	67
AoxI	GGCC	4 cut(s)	510, 927, 1236, 1315
ApeKI	GCWGC	2 cut(s)	785, 1882
ApoI	RAATTY	2 cut(s)	299, 1644
Asp700I	GAANNNNTTC	1 cut(s)	662
AspLEI	GCGC	7 cut(s)	68, 135, 451, 471, 655, 706, 1198
AspS9I	GGNCC	2 cut(s)	46, 927
AsuHPI	GGTGA	8 cut(s)	16, 216, 286, 298, 565, 889, 929, 1235
AvaI	CYCGRG	1 cut(s)	770
AvaII	GGWCC	1 cut(s)	46
BalI	TGGCCA	2 cut(s)	512, 1317
BanI	GGYRCC	1 cut(s)	132
BanII	GRGCYC	2 cut(s)	176, 1473
BauI	CACGAG	2 cut(s)	1145, 1630
BbsI	GAAGAC	1 cut(s)	355
Bbv12I	GWGCWC	1 cut(s)	176
BbvI	GCAGC	2 cut(s)	772, 1869
BccI	CCATC	8 cut(s)	162, 482, 524, 800, 918, 1676, 1805, 1897
BceAI	ACGGC	5 cut(s)	123, 624, 717, 1010, 1290
BcgI	CGANNNNNNTGC	4 cut(s)	428, 460, 462, 494
BclI	TGATCA	1 cut(s)	1551
BcuI	ACTAGT	1 cut(s)	887
BfaI	CTAG	3 cut(s)	38, 888, 1334
BfmI	CTRYAG	3 cut(s)	1104, 1883, 1923
BfoI	RGCGCY	3 cut(s)	69, 136, 707
BfuAI	ACCTGC	1 cut(s)	320
BglII	AGATCT	1 cut(s)	1507
BisI	GCNGC	4 cut(s)	358, 786, 930, 1883
BlsI	GCNGC	4 cut(s)	359, 787, 931, 1884
Bme18I	GGWCC	1 cut(s)	46
BmeT110I	CYCGRG	1 cut(s)	770
BmgT120I	GGNCC	2 cut(s)	46, 927
BmiI	GGNNCC	4 cut(s)	48, 134, 928, 1671
BmrI	ACTGGG	1 cut(s)	588
BmsI	GCATC	6 cut(s)	756, 1063, 1248, 1341, 1726, 1749
BmuI	ACTGGG	1 cut(s)	588
BpiI	GAAGAC	1 cut(s)	355
BplI	GAGNNNNNCTC	2 cut(s)	764, 796
BpmI	CTGGAG	1 cut(s)	1688
BsaHI	GRCGYC	1 cut(s)	133
BsaJI	CCNNGG	2 cut(s)	1318, 1673
BsaWI	WCCGGW	1 cut(s)	1069
BsaXI	ACNNNNNCTCC	2 cut(s)	219, 249
Bsc4I	CCNNNNNNNGG	2 cut(s)	1069, 1324
Bse1I	ACTGG	3 cut(s)	136, 583, 1671
Bse3DI	GCAATG	2 cut(s)	409, 423
BseDI	CCNNGG	2 cut(s)	1318, 1673
BseGI	GGATG	4 cut(s)	493, 1078, 1630, 1851
BseLI	CCNNNNNNNGG	2 cut(s)	1069, 1324
BseMI	GCAATG	2 cut(s)	409, 423
BseMII	CTCAG	3 cut(s)	478, 669, 1405
BseNI	ACTGG	3 cut(s)	136, 583, 1671
BseRI	GAGGAG	7 cut(s)	227, 281, 307, 310, 313, 316, 763
BseXI	GCAGC	2 cut(s)	772, 1869
BseYI	CCCAGC	1 cut(s)	1835
Bsh1236I	CGCG	2 cut(s)	360, 655
Bsh1285I	CGRYCG	1 cut(s)	370
BshFI	GGCC	4 cut(s)	512, 929, 1238, 1317
BshNI	GGYRCC	1 cut(s)	132
BsiEI	CGRYCG	1 cut(s)	370
BsiHKAI	GWGCWC	1 cut(s)	176
BsiHKCI	CYCGRG	1 cut(s)	770
BsiSI	CCGG	2 cut(s)	485, 1070
BslFI	GGGAC	5 cut(s)	32, 791, 1045, 1853, 1920
BslI	CCNNNNNNNGG	2 cut(s)	1069, 1324
BsmFI	GGGAC	5 cut(s)	32, 791, 1045, 1853, 1920
BsmI	GAATGC	2 cut(s)	1092, 1291
BsnI	GGCC	4 cut(s)	512, 929, 1238, 1317
BsoBI	CYCGRG	1 cut(s)	770
Bsp1286I	GDGCHC	2 cut(s)	176, 1473
Bsp143I	GATC	5 cut(s)	367, 408, 865, 1507, 1551
Bsp19I	CCATGG	2 cut(s)	1318, 1673
BspACI	CCGC	9 cut(s)	355, 358, 435, 655, 714, 728, 930, 1404, 1762
BspANI	GGCC	4 cut(s)	512, 929, 1238, 1317
BspCNI	CTCAG	3 cut(s)	477, 670, 1404
BspFNI	CGCG	2 cut(s)	360, 655
BspHI	TCATGA	1 cut(s)	1039
BspLI	GGNNCC	4 cut(s)	48, 134, 928, 1671
BspMAI	CTGCAG	1 cut(s)	1887
BspMI	ACCTGC	1 cut(s)	320
BspPI	GGATC	1 cut(s)	873
BspT107I	GGYRCC	1 cut(s)	132
BsrBI	CCGCTC	1 cut(s)	728
BsrDI	GCAATG	2 cut(s)	409, 423
BsrI	ACTGG	3 cut(s)	136, 583, 1671
BssECI	CCNNGG	2 cut(s)	1318, 1673
BssMI	GATC	5 cut(s)	367, 408, 865, 1507, 1551
BssNAI	GTATAC	1 cut(s)	495
BssNI	GRCGYC	1 cut(s)	133
BssSI	CACGAG	2 cut(s)	1145, 1630
BssT1I	CCWWGG	2 cut(s)	1318, 1673
Bst1107I	GTATAC	1 cut(s)	495
Bst2BI	CACGAG	2 cut(s)	1145, 1630
Bst4CI	ACNGT	1 cut(s)	563
BstACI	GRCGYC	1 cut(s)	133
BstC8I	GCNNGC	2 cut(s)	355, 1562
BstDEI	CTNAG	4 cut(s)	178, 464, 678, 1391
BstDSI	CCRYGG	2 cut(s)	1318, 1673
BstF5I	GGATG	4 cut(s)	493, 1078, 1630, 1851
BstFNI	CGCG	2 cut(s)	360, 655
BstH2I	RGCGCY	3 cut(s)	69, 136, 707
BstHHI	GCGC	7 cut(s)	68, 135, 451, 471, 655, 706, 1198
BstKTI	GATC	5 cut(s)	370, 411, 868, 1510, 1554
BstMBI	GATC	5 cut(s)	367, 408, 865, 1507, 1551
BstMCI	CGRYCG	1 cut(s)	370
BstMWI	GCNNNNNNNGC	3 cut(s)	425, 434, 794
BstNSI	RCATGY	3 cut(s)	625, 1564, 1611
BstSFI	CTRYAG	3 cut(s)	1104, 1883, 1923
BstUI	CGCG	2 cut(s)	360, 655
BstV1I	GCAGC	2 cut(s)	772, 1869
BstV2I	GAAGAC	1 cut(s)	355
BstX2I	RGATCY	1 cut(s)	1507
BstYI	RGATCY	1 cut(s)	1507
BstZ17I	GTATAC	1 cut(s)	495
BsuRI	GGCC	4 cut(s)	512, 929, 1238, 1317
BtgI	CCRYGG	2 cut(s)	1318, 1673
BtsCI	GGATG	4 cut(s)	493, 1078, 1630, 1851
BtsI	GCAGTG	1 cut(s)	1191
BtsIMutI	CAGTG	4 cut(s)	143, 559, 1191, 1399
BveI	ACCTGC	1 cut(s)	320
Cac8I	GCNNGC	2 cut(s)	355, 1562
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	7 cut(s)	68, 135, 451, 471, 655, 706, 1198
Cfr13I	GGNCC	2 cut(s)	46, 927
CseI	GACGC	1 cut(s)	349
Csp6I	GTAC	2 cut(s)	904, 1056
CspCI	CAANNNNNGTGG	2 cut(s)	502, 537
CviQI	GTAC	2 cut(s)	904, 1056
DdeI	CTNAG	4 cut(s)	178, 464, 678, 1391
DinI	GGCGCC	1 cut(s)	134
DpnI	GATC	5 cut(s)	369, 410, 867, 1509, 1553
DpnII	GATC	5 cut(s)	367, 408, 865, 1507, 1551
EaeI	YGGCCR	2 cut(s)	510, 1315
EciI	GGCGGA	1 cut(s)	424
Ecl136II	GAGCTC	1 cut(s)	174
Eco130I	CCWWGG	2 cut(s)	1318, 1673
Eco24I	GRGCYC	2 cut(s)	176, 1473
Eco47I	GGWCC	1 cut(s)	46
Eco47III	AGCGCT	1 cut(s)	67
Eco53kI	GAGCTC	1 cut(s)	174
Eco88I	CYCGRG	1 cut(s)	770
EcoICRI	GAGCTC	1 cut(s)	174
EcoT14I	CCWWGG	2 cut(s)	1318, 1673
EcoT38I	GRGCYC	2 cut(s)	176, 1473
EgeI	GGCGCC	1 cut(s)	134
EheI	GGCGCC	1 cut(s)	134
ErhI	CCWWGG	2 cut(s)	1318, 1673
FaqI	GGGAC	5 cut(s)	32, 791, 1045, 1853, 1920
FauI	CCCGC	3 cut(s)	362, 707, 721
FauNDI	CATATG	1 cut(s)	1872
FbaI	TGATCA	1 cut(s)	1551
FblI	GTMKAC	1 cut(s)	494
Fnu4HI	GCNGC	4 cut(s)	358, 786, 930, 1883
FokI	GGATG	4 cut(s)	500, 1085, 1637, 1858
FriOI	GRGCYC	2 cut(s)	176, 1473
Fsp4HI	GCNGC	4 cut(s)	358, 786, 930, 1883
FspBI	CTAG	3 cut(s)	38, 888, 1334
GlaI	GCGC	7 cut(s)	67, 134, 450, 470, 654, 705, 1197
GluI	GCNGC	4 cut(s)	358, 786, 930, 1883
GsaI	CCCAGC	1 cut(s)	1839
GsuI	CTGGAG	1 cut(s)	1688
HaeII	RGCGCY	3 cut(s)	69, 136, 707
HaeIII	GGCC	4 cut(s)	512, 929, 1238, 1317
HapII	CCGG	2 cut(s)	485, 1070
HgaI	GACGC	1 cut(s)	349
HhaI	GCGC	7 cut(s)	68, 135, 451, 471, 655, 706, 1198
Hin1I	GRCGYC	1 cut(s)	133
Hin6I	GCGC	7 cut(s)	66, 133, 449, 469, 653, 704, 1196
HinP1I	GCGC	7 cut(s)	66, 133, 449, 469, 653, 704, 1196
HincII	GTYRAC	1 cut(s)	619
HindII	GTYRAC	1 cut(s)	619
HinfI	GANTC	8 cut(s)	431, 440, 556, 779, 947, 964, 1768, 1818
HpaII	CCGG	2 cut(s)	485, 1070
HphI	GGTGA	8 cut(s)	16, 216, 286, 298, 565, 889, 929, 1235
Hpy166II	GTNNAC	5 cut(s)	86, 495, 619, 699, 1144
Hpy188I	TCNGA	4 cut(s)	263, 843, 870, 1348
Hpy188III	TCNNGA	4 cut(s)	1040, 1145, 1555, 1630
Hpy8I	GTNNAC	5 cut(s)	86, 495, 619, 699, 1144
Hpy99I	CGWCG	1 cut(s)	610
HpyAV	CCTTC	7 cut(s)	122, 209, 262, 652, 1427, 1512, 1719
HpyCH4III	ACNGT	1 cut(s)	563
HpyCH4IV	ACGT	1 cut(s)	1058
HpyF10VI	GCNNNNNNNGC	3 cut(s)	425, 434, 794
HpyF3I	CTNAG	4 cut(s)	178, 464, 678, 1391
HpySE526I	ACGT	1 cut(s)	1058
Hsp92I	GRCGYC	1 cut(s)	133
HspAI	GCGC	7 cut(s)	66, 133, 449, 469, 653, 704, 1196
KasI	GGCGCC	1 cut(s)	132
Ksp22I	TGATCA	1 cut(s)	1551
Kzo9I	GATC	5 cut(s)	367, 408, 865, 1507, 1551
LmnI	GCTCC	5 cut(s)	171, 179, 264, 320, 1669
Lsp1109I	GCAGC	2 cut(s)	772, 1869
LweI	GCATC	6 cut(s)	756, 1063, 1248, 1341, 1726, 1749
MaeI	CTAG	3 cut(s)	38, 888, 1334
MaeII	ACGT	1 cut(s)	1058
MaeIII	GTNAC	4 cut(s)	29, 1078, 1409, 1627
MalI	GATC	5 cut(s)	369, 410, 867, 1509, 1553
MbiI	CCGCTC	1 cut(s)	728
MboI	GATC	5 cut(s)	367, 408, 865, 1507, 1551
MboII	GAAGA	6 cut(s)	355, 970, 973, 1088, 1174, 1777
MflI	RGATCY	1 cut(s)	1507
MhlI	GDGCHC	2 cut(s)	176, 1473
MlsI	TGGCCA	2 cut(s)	512, 1317
MluCI	AATT	6 cut(s)	111, 299, 1227, 1584, 1644, 1687
MluNI	TGGCCA	2 cut(s)	512, 1317
Mly113I	GGCGCC	1 cut(s)	133
MlyI	GAGTC	2 cut(s)	449, 773
MmeI	TCCRAC	3 cut(s)	229, 863, 1871
Mox20I	TGGCCA	2 cut(s)	512, 1317
MroXI	GAANNNNTTC	1 cut(s)	662
MscI	TGGCCA	2 cut(s)	512, 1317
MseI	TTAA	5 cut(s)	573, 792, 1449, 1575, 1749
MslI	CAYNNNNRTG	5 cut(s)	146, 564, 626, 915, 1856
Msp20I	TGGCCA	2 cut(s)	512, 1317
MspI	CCGG	2 cut(s)	485, 1070
Mva1269I	GAATGC	2 cut(s)	1092, 1291
MvnI	CGCG	2 cut(s)	360, 655
MwoI	GCNNNNNNNGC	3 cut(s)	425, 434, 794
NarI	GGCGCC	1 cut(s)	133
NcoI	CCATGG	2 cut(s)	1318, 1673
NdeI	CATATG	1 cut(s)	1872
NdeII	GATC	5 cut(s)	367, 408, 865, 1507, 1551
NlaIV	GGNNCC	4 cut(s)	48, 134, 928, 1671
NmeAIII	GCCGAG	2 cut(s)	463, 761
NmuCI	GTSAC	1 cut(s)	1627
NspI	RCATGY	3 cut(s)	625, 1564, 1611
PaeI	GCATGC	1 cut(s)	1564
PagI	TCATGA	1 cut(s)	1039
PaqCI	CACCTGC	1 cut(s)	320
PciI	ACATGT	1 cut(s)	621
PcsI	WCGNNNNNNNCGW	1 cut(s)	357
PctI	GAATGC	2 cut(s)	1092, 1291
PdmI	GAANNNNTTC	1 cut(s)	662
PfeI	GAWTC	6 cut(s)	431, 556, 947, 964, 1768, 1818
PkrI	GCNGC	4 cut(s)	359, 787, 931, 1884
Ple19I	CGATCG	1 cut(s)	370
PleI	GAGTC	2 cut(s)	448, 773
PluTI	GGCGCC	1 cut(s)	136
PpsI	GAGTC	2 cut(s)	448, 773
PscI	ACATGT	1 cut(s)	621
Psp124BI	GAGCTC	1 cut(s)	176
PspFI	CCCAGC	1 cut(s)	1835
PspN4I	GGNNCC	4 cut(s)	48, 134, 928, 1671
PspPI	GGNCC	2 cut(s)	46, 927
PstI	CTGCAG	1 cut(s)	1887
PsuI	RGATCY	1 cut(s)	1507
PvuI	CGATCG	1 cut(s)	370
RsaI	GTAC	2 cut(s)	905, 1057
RsaNI	GTAC	2 cut(s)	904, 1056
RseI	CAYNNNNRTG	5 cut(s)	146, 564, 626, 915, 1856
SacI	GAGCTC	1 cut(s)	176
SaqAI	TTAA	5 cut(s)	573, 792, 1449, 1575, 1749
SatI	GCNGC	4 cut(s)	358, 786, 930, 1883
Sau3AI	GATC	5 cut(s)	367, 408, 865, 1507, 1551
Sau96I	GGNCC	2 cut(s)	46, 927
SchI	GAGTC	2 cut(s)	449, 773
SduI	GDGCHC	2 cut(s)	176, 1473
SfaNI	GCATC	6 cut(s)	756, 1063, 1248, 1341, 1726, 1749
SfcI	CTRYAG	3 cut(s)	1104, 1883, 1923
SfoI	GGCGCC	1 cut(s)	134
SinI	GGWCC	1 cut(s)	46
SmiMI	CAYNNNNRTG	5 cut(s)	146, 564, 626, 915, 1856
SpeI	ACTAGT	1 cut(s)	887
SphI	GCATGC	1 cut(s)	1564
Sse9I	AATT	6 cut(s)	111, 299, 1227, 1584, 1644, 1687
SsiI	CCGC	9 cut(s)	355, 358, 435, 655, 714, 728, 930, 1404, 1762
SspDI	GGCGCC	1 cut(s)	132
SspMI	CTAG	3 cut(s)	38, 888, 1334
SstI	GAGCTC	1 cut(s)	176
StyI	CCWWGG	2 cut(s)	1318, 1673
TaaI	ACNGT	1 cut(s)	563
TaiI	ACGT	1 cut(s)	1061
TaqI	TCGA	8 cut(s)	15, 273, 366, 480, 605, 666, 688, 913
TasI	AATT	6 cut(s)	111, 299, 1227, 1584, 1644, 1687
TauI	GCSGC	2 cut(s)	360, 932
TfiI	GAWTC	6 cut(s)	431, 556, 947, 964, 1768, 1818
Tru1I	TTAA	5 cut(s)	573, 792, 1449, 1575, 1749
Tru9I	TTAA	5 cut(s)	573, 792, 1449, 1575, 1749
TscAI	CASTG	4 cut(s)	143, 566, 1198, 1399
TseFI	GTSAC	1 cut(s)	1627
TseI	GCWGC	2 cut(s)	785, 1882
Tsp45I	GTSAC	1 cut(s)	1627
TspDTI	ATGAA	8 cut(s)	164, 244, 292, 684, 1028, 1035, 1056, 1862
TspRI	CASTG	4 cut(s)	143, 566, 1198, 1399
VpaK11BI	GGWCC	1 cut(s)	46
XapI	RAATTY	2 cut(s)	299, 1644
XceI	RCATGY	3 cut(s)	625, 1564, 1611
XmiI	GTMKAC	1 cut(s)	494
XmnI	GAANNNNTTC	1 cut(s)	662
XspI	CTAG	3 cut(s)	38, 888, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.