Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0008546

Physical Location & Seq

Genomic Coordinates Reverse (-)

38818778 .. 38820568

Gene Structure 1791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG204700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGACAATGAAAGACCAACTATGGAGATGGAGCTCCTTGGAAAGAAAATGCTTATTCCTTCTCCAACAAGGCAACCCTACACCACCCTCTCTTCTCCAAATCCACGCCTTCATCCTCCGAAACGCCCTCGAAACCAACCTCAATCTCCTCACCAAATTCATCACCACCTGCTCCTCCTCCCCCTCGCAGCTGATCAAACACGCCCGTCGCGTCTTCGATCACCAACCCAATAAGCATGACACGTTTCTCTGCAATGCCGTGATCAGAGCCCACATGGCCCAATTCGCCGAGTCTTTCGCTCTTTATAGAGATCTTAGACAGGACAAAGGTTTCGAGCCGGATGGGTACACATTCACGGCTCTTGCCAAGTCGTGCGGGTTAGATGGGGATAGATCAGAAGGAGAAGAGATTCATTGTCATGCTGTTAAGACTGGGCTGTGTTTGGATTTGTATGTTTCGACGTCTTTGGTTGACATGTATGTGAAGTTTGGGACGATGGGTTGTGCAAGGAAGGTGTTTGATGAAATGACTGAGAGAAATATAGTGTCGTGGACGGCTCTTGTTTGCGGGTATGCAAGGACGGGAGATATGGGCAGTGCGAGGAGGCTTTTTGATGAAATGCCTGAGAGGGACTCGGCCGCGTTTAATGCATTGATTGATGGATATGTCAAGTTGGGGGAAATGGGGGCGGCTCGAAGTTTGTTTGATGAGATGAGGGATAGGAATGTGGTGACTTGGACTAGTATGATATACGGTTACTGCCATCGAGGTGATGTAGAGGCCGCTAAATCACTCTTTGATTCTATGCCCAAGAAGAATCTTATTTCTTGGAATGTGATTATTGGTGGTTGTTGCCAAAACAAACGTCCCCATGAAGCCGTGAGATTGTTTCATGAAATGCAGTCAACTACATCGCTTGAACCAGATGCTGTAACGGTTGTGAGCATTCTTCCGGCTATAGCTGATTTGGGTGCTTTGGATTTAGGGCATTGGGTTCACGAGTTTGTACAGAGGAAGAAGCTTGATAGGCTAACCAATATATGCACTGCACTTGTGGATATGTATGCAAAATGTGGTGAAATAAAAAAGGCCAAAAGACTCTTTGATGAGATGCCTGAAAAAGAAACGGCTTCTTGGAATGCTTTGATAAATGGGTTTGCAGTCAATGGCTATGGAAAGGAGGCACTAGAGGTATTTTTAGAGATGCAACGAGAAAAGTTTAAGCCTAACAATATAACCTTTGTCGGTGTTCTGTCCGCTTGTAACCATTGTGGTCTGGTAGAGGAAGGGAAATTTTGGTTTAGGAAAATGGAAAACTTTGGGCTCATTCCACAGATTGAGCATTATGGTTGTATGGTAGATCTTTTAGGAAGGGCAGGGTGCTTGGAGGAAGCTGAGAAGCTGATCAAGAGCATGCCTTACGATGTTAATGGGATAATTTTGAGTTCCTTTCTTTTTGCATGTGGGTATTGTGAGGATGTTACGAAAGCCAACAAAACTTTAGAGCAGGCTGTCAAACTGGAGCCATGGAATTATGGAAATTATGTAATCTTGAGAAATTTGTATGCGAGAAACAGAAGGTGGAGTGATGCAGATAATATTAAGAGTTCGATGCGGAAGAATCAAGCAGATAAAGAGGTTGGTTGTAGTGTTATAGAGGTTGATGGTAGAATCAAGCAGTTTGTGGCTGGGGACAGGATGCAGACATCTTCGGAAGCTATACATTTGACTTTGCTACAGAGTTGGAAGCACATGATGGGACAAGTCCCATGTTCTATAGCTAAGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

596

Amino Acids

67.44

Weight (kDa)

7.19

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	182 - 210	2.7e-06	PPR repeat
PPR_2	PF13041	211 - 243	4.1e-07	PPR repeat family
PPR	PF01535	214 - 243	4.1e-07	PPR repeat
PPR_2	PF13041	241 - 274	6.6e-09	PPR repeat family
PPR_1	PF12854	242 - 269	2e-07	PPR repeat
PPR	PF01535	244 - 273	1.3e-08	PPR repeat
PPR_2	PF13041	273 - 317	1e-09	PPR repeat family
PPR_1	PF12854	273 - 301	6.5e-06	PPR repeat
PPR	PF01535	275 - 302	1.4e-07	PPR repeat
PPR_2	PF13041	376 - 421	1.6e-10	PPR repeat family
PPR	PF01535	378 - 406	8.9e-08	PPR repeat
E_motif	PF20431	493 - 553	6e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008546)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44880 AT2G44880 AT2G44880 AT2G44880 AT2G44880 AT2G44880
fragaria_vesca	FvH4_7g09950
malus_domestica	MD07G1104700.v1.1 MD07G1105400.v1.1
prunus_persica	Prupe.2G128300_v2.0.a1
pyrus_communis	pycom07g08960
rosa_chinensis	RchiOBHm_Chr1g0347511 RchiOBHm_Chr1g0347541
rosa_laevigata	RLG00000028745
rosa_multiflora	Rmu_ssc0000280.1_g000005
rosa_roxburghii	Rroxscaffold_4G00307740
rosa_rugosa	Rorug01G0187500
rosa_samantha	Rh1AG204700 Rh1BG170500 Rh1CG189800 Rh1DG200800
rosa_wichuraiana	Rw0G013630 Rw1G017180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	176
AatII	GACGTC	1 cut(s)	464
Acc36I	ACCTGC	1 cut(s)	176
AccII	CGCG	2 cut(s)	210, 641
AciI	CCGC	7 cut(s)	375, 567, 639, 689, 783, 1257, 1615
AcoI	YGGCCR	1 cut(s)	636
AcsI	RAATTY	3 cut(s)	155, 1292, 1558
AcyI	GRCGYC	1 cut(s)	461
AfaI	GTAC	2 cut(s)	347, 1008
AflIII	ACRYGT	2 cut(s)	240, 474
AgsI	TTSAA	1 cut(s)	920
AhlI	ACTAGT	1 cut(s)	740
AluBI	AGCT	8 cut(s)	33, 190, 962, 1021, 1394, 1402, 1718, 1781
AluI	AGCT	8 cut(s)	33, 190, 962, 1021, 1394, 1402, 1718, 1781
Alw21I	GWGCWC	1 cut(s)	35
AlwNI	CAGNNNCTG	1 cut(s)	929
AoxI	GGCC	4 cut(s)	276, 636, 780, 1089
ApeKI	GCWGC	1 cut(s)	187
ApoI	RAATTY	3 cut(s)	155, 1292, 1558
ArsI	GACNNNNNNTTYG	4 cut(s)	314, 346, 850, 882
Asp700I	GAANNNNTTC	1 cut(s)	408
AspS9I	GGNCC	1 cut(s)	277
AsuHPI	GGTGA	6 cut(s)	142, 154, 212, 742, 782, 1088
BanII	GRGCYC	3 cut(s)	35, 271, 1326
BauI	CACGAG	1 cut(s)	998
BbsI	GAAGAC	1 cut(s)	205
Bbv12I	GWGCWC	1 cut(s)	35
BbvI	GCAGC	1 cut(s)	199
BccI	CCATC	8 cut(s)	21, 335, 377, 490, 653, 771, 1658, 1750
BceAI	ACGGC	5 cut(s)	242, 372, 570, 863, 1143
BclI	TGATCA	3 cut(s)	192, 261, 1404
BcuI	ACTAGT	1 cut(s)	740
BfaI	CTAG	2 cut(s)	741, 1187
BfmI	CTRYAG	3 cut(s)	957, 1736, 1776
BfuAI	ACCTGC	1 cut(s)	176
BglI	GCCNNNNNGGC	1 cut(s)	275
BglII	AGATCT	2 cut(s)	310, 1360
BisI	GCNGC	4 cut(s)	188, 639, 690, 783
BlsI	GCNGC	4 cut(s)	189, 640, 691, 784
BmgT120I	GGNCC	1 cut(s)	277
BmiI	GGNNCC	1 cut(s)	1524
BmrI	ACTGGG	1 cut(s)	441
BmsI	GCATC	6 cut(s)	916, 1101, 1194, 1579, 1602, 1689
BmuI	ACTGGG	1 cut(s)	441
BpiI	GAAGAC	1 cut(s)	205
BplI	GAGNNNNNCTC	2 cut(s)	617, 649
BpmI	CTGGAG	1 cut(s)	1541
Bpu10I	CCTNAGC	1 cut(s)	1782
BpuEI	CTTGAG	1 cut(s)	1573
BsaHI	GRCGYC	1 cut(s)	461
BsaJI	CCNNGG	2 cut(s)	36, 1526
Bse1I	ACTGG	2 cut(s)	436, 1524
Bse3DI	GCAATG	1 cut(s)	259
BseDI	CCNNGG	2 cut(s)	36, 1526
BseGI	GGATG	4 cut(s)	111, 346, 1483, 1704
BseMI	GCAATG	1 cut(s)	259
BseMII	CTCAG	3 cut(s)	522, 615, 1386
BseNI	ACTGG	2 cut(s)	436, 1524
BseRI	GAGGAG	4 cut(s)	137, 163, 166, 616
BseX3I	CGGCCG	1 cut(s)	636
BseXI	GCAGC	1 cut(s)	199
BseYI	CCCAGC	1 cut(s)	1688
BsgI	GTGCAG	1 cut(s)	1032
Bsh1236I	CGCG	2 cut(s)	210, 641
Bsh1285I	CGRYCG	1 cut(s)	639
BshFI	GGCC	4 cut(s)	278, 638, 782, 1091
BsiEI	CGRYCG	1 cut(s)	639
BsiHKAI	GWGCWC	1 cut(s)	35
BsiSI	CCGG	2 cut(s)	338, 953
BslFI	GGGAC	6 cut(s)	505, 644, 852, 1706, 1751, 1773
BsmFI	GGGAC	6 cut(s)	505, 644, 852, 1706, 1751, 1773
BsmI	GAATGC	2 cut(s)	945, 1144
BsnI	GGCC	4 cut(s)	278, 638, 782, 1091
Bsp1286I	GDGCHC	3 cut(s)	35, 271, 1326
Bsp1407I	TGTACA	1 cut(s)	1006
Bsp143I	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
Bsp19I	CCATGG	1 cut(s)	1526
BspACI	CCGC	7 cut(s)	375, 567, 639, 689, 783, 1257, 1615
BspANI	GGCC	4 cut(s)	278, 638, 782, 1091
BspCNI	CTCAG	3 cut(s)	523, 616, 1387
BspFNI	CGCG	2 cut(s)	210, 641
BspHI	TCATGA	1 cut(s)	892
BspLI	GGNNCC	1 cut(s)	1524
BspMI	ACCTGC	1 cut(s)	176
BsrDI	GCAATG	1 cut(s)	259
BsrGI	TGTACA	1 cut(s)	1006
BsrI	ACTGG	2 cut(s)	436, 1524
BssECI	CCNNGG	2 cut(s)	36, 1526
BssMI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
BssNI	GRCGYC	1 cut(s)	461
BssSI	CACGAG	1 cut(s)	998
BssT1I	CCWWGG	2 cut(s)	36, 1526
Bst2BI	CACGAG	1 cut(s)	998
Bst4CI	ACNGT	2 cut(s)	755, 937
Bst6I	CTCTTC	2 cut(s)	96, 399
BstACI	GRCGYC	1 cut(s)	461
BstAUI	TGTACA	1 cut(s)	1006
BstC8I	GCNNGC	2 cut(s)	1415, 1509
BstDEI	CTNAG	5 cut(s)	314, 531, 624, 1395, 1782
BstDSI	CCRYGG	1 cut(s)	1526
BstF5I	GGATG	4 cut(s)	111, 346, 1483, 1704
BstFNI	CGCG	2 cut(s)	210, 641
BstKTI	GATC	7 cut(s)	195, 220, 264, 313, 395, 1363, 1407
BstMBI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
BstMCI	CGRYCG	1 cut(s)	639
BstMWI	GCNNNNNNNGC	4 cut(s)	275, 284, 647, 1027
BstNSI	RCATGY	3 cut(s)	478, 1417, 1464
BstSFI	CTRYAG	3 cut(s)	957, 1736, 1776
BstUI	CGCG	2 cut(s)	210, 641
BstV1I	GCAGC	1 cut(s)	199
BstV2I	GAAGAC	1 cut(s)	205
BstX2I	RGATCY	2 cut(s)	310, 1360
BstYI	RGATCY	2 cut(s)	310, 1360
BstZI	CGGCCG	1 cut(s)	636
BsuRI	GGCC	4 cut(s)	278, 638, 782, 1091
BtgI	CCRYGG	1 cut(s)	1526
BtgZI	GCGATG	1 cut(s)	897
BtsCI	GGATG	4 cut(s)	111, 346, 1483, 1704
BtsI	GCAGTG	2 cut(s)	601, 1044
BtsIMutI	CAGTG	2 cut(s)	601, 1044
BveI	ACCTGC	1 cut(s)	176
Cac8I	GCNNGC	2 cut(s)	1415, 1509
CaiI	CAGNNNCTG	1 cut(s)	929
CciI	TCATGA	1 cut(s)	892
Cfr13I	GGNCC	1 cut(s)	277
CseI	GACGC	1 cut(s)	199
Csp6I	GTAC	2 cut(s)	346, 1007
CviQI	GTAC	2 cut(s)	346, 1007
DdeI	CTNAG	5 cut(s)	314, 531, 624, 1395, 1782
DpnI	GATC	7 cut(s)	194, 219, 263, 312, 394, 1362, 1406
DpnII	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
EaeI	YGGCCR	1 cut(s)	636
EagI	CGGCCG	1 cut(s)	636
Eam1104I	CTCTTC	2 cut(s)	96, 399
EarI	CTCTTC	2 cut(s)	96, 399
Ecl136II	GAGCTC	1 cut(s)	33
EclXI	CGGCCG	1 cut(s)	636
Eco130I	CCWWGG	2 cut(s)	36, 1526
Eco24I	GRGCYC	3 cut(s)	35, 271, 1326
Eco52I	CGGCCG	1 cut(s)	636
Eco53kI	GAGCTC	1 cut(s)	33
EcoICRI	GAGCTC	1 cut(s)	33
EcoT14I	CCWWGG	2 cut(s)	36, 1526
EcoT22I	ATGCAT	1 cut(s)	652
EcoT38I	GRGCYC	3 cut(s)	35, 271, 1326
ErhI	CCWWGG	2 cut(s)	36, 1526
FaqI	GGGAC	6 cut(s)	505, 644, 852, 1706, 1751, 1773
FauI	CCCGC	2 cut(s)	368, 560
FbaI	TGATCA	3 cut(s)	192, 261, 1404
Fnu4HI	GCNGC	4 cut(s)	188, 639, 690, 783
FokI	GGATG	4 cut(s)	98, 353, 1490, 1711
FriOI	GRGCYC	3 cut(s)	35, 271, 1326
Fsp4HI	GCNGC	4 cut(s)	188, 639, 690, 783
FspBI	CTAG	2 cut(s)	741, 1187
GluI	GCNGC	4 cut(s)	188, 639, 690, 783
GsaI	CCCAGC	1 cut(s)	1692
GsuI	CTGGAG	1 cut(s)	1541
HaeIII	GGCC	4 cut(s)	278, 638, 782, 1091
HapII	CCGG	2 cut(s)	338, 953
HgaI	GACGC	1 cut(s)	199
Hin1I	GRCGYC	1 cut(s)	461
HincII	GTYRAC	2 cut(s)	472, 906
HindII	GTYRAC	2 cut(s)	472, 906
HindIII	AAGCTT	1 cut(s)	1019
HinfI	GANTC	8 cut(s)	290, 409, 632, 800, 817, 1098, 1621, 1671
HpaII	CCGG	2 cut(s)	338, 953
HphI	GGTGA	6 cut(s)	142, 154, 212, 742, 782, 1088
Hpy166II	GTNNAC	5 cut(s)	348, 472, 552, 906, 997
Hpy188I	TCNGA	4 cut(s)	119, 266, 397, 1714
Hpy188III	TCNNGA	4 cut(s)	893, 998, 1408, 1552
Hpy8I	GTNNAC	5 cut(s)	348, 472, 552, 906, 997
Hpy99I	CGWCG	2 cut(s)	210, 463
HpyAV	CCTTC	7 cut(s)	68, 118, 392, 505, 1280, 1365, 1572
HpyCH4III	ACNGT	2 cut(s)	755, 937
HpyCH4IV	ACGT	3 cut(s)	242, 461, 865
HpyF10VI	GCNNNNNNNGC	4 cut(s)	275, 284, 647, 1027
HpyF3I	CTNAG	5 cut(s)	314, 531, 624, 1395, 1782
HpySE526I	ACGT	3 cut(s)	242, 461, 865
Hsp92I	GRCGYC	1 cut(s)	461
Ksp22I	TGATCA	3 cut(s)	192, 261, 1404
Kzo9I	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
LmnI	GCTCC	4 cut(s)	30, 38, 176, 1522
Lsp1109I	GCAGC	1 cut(s)	199
LweI	GCATC	6 cut(s)	916, 1101, 1194, 1579, 1602, 1689
MaeI	CTAG	2 cut(s)	741, 1187
MaeII	ACGT	3 cut(s)	242, 461, 865
MaeIII	GTNAC	5 cut(s)	730, 755, 931, 1262, 1480
MalI	GATC	7 cut(s)	194, 219, 263, 312, 394, 1362, 1406
MboI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
MboII	GAAGA	8 cut(s)	83, 205, 416, 826, 941, 1027, 1630, 1701
MflI	RGATCY	2 cut(s)	310, 1360
MhlI	GDGCHC	3 cut(s)	35, 271, 1326
MluCI	AATT	7 cut(s)	155, 281, 1292, 1437, 1531, 1540, 1558
MlyI	GAGTC	3 cut(s)	299, 626, 1092
MmeI	TCCRAC	2 cut(s)	88, 1724
Mph1103I	ATGCAT	1 cut(s)	652
MroXI	GAANNNNTTC	1 cut(s)	408
MseI	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
MslI	CAYNNNNRTG	3 cut(s)	417, 479, 768
MspA1I	CMGCKG	1 cut(s)	190
MspI	CCGG	2 cut(s)	338, 953
Mva1269I	GAATGC	2 cut(s)	945, 1144
MvnI	CGCG	2 cut(s)	210, 641
MwoI	GCNNNNNNNGC	4 cut(s)	275, 284, 647, 1027
NcoI	CCATGG	1 cut(s)	1526
NdeII	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
NlaIV	GGNNCC	1 cut(s)	1524
NmeAIII	GCCGAG	2 cut(s)	313, 614
NmuCI	GTSAC	1 cut(s)	730
NsiI	ATGCAT	1 cut(s)	652
NspI	RCATGY	3 cut(s)	478, 1417, 1464
PaeI	GCATGC	1 cut(s)	1417
PagI	TCATGA	1 cut(s)	892
PaqCI	CACCTGC	1 cut(s)	176
PciI	ACATGT	1 cut(s)	474
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PctI	GAATGC	2 cut(s)	945, 1144
PdmI	GAANNNNTTC	1 cut(s)	408
PfeI	GAWTC	5 cut(s)	409, 800, 817, 1621, 1671
PkrI	GCNGC	4 cut(s)	189, 640, 691, 784
PleI	GAGTC	3 cut(s)	298, 626, 1092
PpsI	GAGTC	3 cut(s)	298, 626, 1092
PscI	ACATGT	1 cut(s)	474
Psp124BI	GAGCTC	1 cut(s)	35
PspFI	CCCAGC	1 cut(s)	1688
PspN4I	GGNNCC	1 cut(s)	1524
PspPI	GGNCC	1 cut(s)	277
PstNI	CAGNNNCTG	1 cut(s)	929
PsuI	RGATCY	2 cut(s)	310, 1360
PvuII	CAGCTG	1 cut(s)	190
RsaI	GTAC	2 cut(s)	347, 1008
RsaNI	GTAC	2 cut(s)	346, 1007
RseI	CAYNNNNRTG	3 cut(s)	417, 479, 768
SacI	GAGCTC	1 cut(s)	35
SaqAI	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
SatI	GCNGC	4 cut(s)	188, 639, 690, 783
Sau3AI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
Sau96I	GGNCC	1 cut(s)	277
SchI	GAGTC	3 cut(s)	299, 626, 1092
SduI	GDGCHC	3 cut(s)	35, 271, 1326
SfaNI	GCATC	6 cut(s)	916, 1101, 1194, 1579, 1602, 1689
SfcI	CTRYAG	3 cut(s)	957, 1736, 1776
SmiMI	CAYNNNNRTG	3 cut(s)	417, 479, 768
SmlI	CTYRAG	1 cut(s)	1552
SmoI	CTYRAG	1 cut(s)	1552
SpeI	ACTAGT	1 cut(s)	740
SphI	GCATGC	1 cut(s)	1417
Sse9I	AATT	7 cut(s)	155, 281, 1292, 1437, 1531, 1540, 1558
SsiI	CCGC	7 cut(s)	375, 567, 639, 689, 783, 1257, 1615
SspI	AATATT	1 cut(s)	1600
SspMI	CTAG	2 cut(s)	741, 1187
SstI	GAGCTC	1 cut(s)	35
StyI	CCWWGG	2 cut(s)	36, 1526
TaaI	ACNGT	2 cut(s)	755, 937
TaiI	ACGT	3 cut(s)	245, 464, 868
TaqI	TCGA	7 cut(s)	129, 216, 333, 458, 694, 766, 1610
TasI	AATT	7 cut(s)	155, 281, 1292, 1437, 1531, 1540, 1558
TatI	WGTACW	1 cut(s)	1006
TauI	GCSGC	3 cut(s)	641, 692, 785
TfiI	GAWTC	5 cut(s)	409, 800, 817, 1621, 1671
Tru1I	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
Tru9I	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
TscAI	CASTG	2 cut(s)	601, 1051
TseFI	GTSAC	1 cut(s)	730
TseI	GCWGC	1 cut(s)	187
Tsp45I	GTSAC	1 cut(s)	730
TspDTI	ATGAA	9 cut(s)	23, 100, 148, 401, 537, 630, 881, 888, 909
TspRI	CASTG	2 cut(s)	601, 1051
XapI	RAATTY	3 cut(s)	155, 1292, 1558
XceI	RCATGY	3 cut(s)	478, 1417, 1464
XmnI	GAANNNNTTC	1 cut(s)	408
XspI	CTAG	2 cut(s)	741, 1187
ZraI	GACGTC	1 cut(s)	462
Zsp2I	ATGCAT	1 cut(s)	652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.