Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0013339

Physical Location & Seq

Genomic Coordinates Forward (+)

13535665 .. 13540598

Gene Structure 4934 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g15690.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3564 bp

ATGATGCCAATGTACAGATACATGGATTCACACCCCGAGCAGAGAAACCAGACCTTCTCTTTCCCTCAATATCCTTATCCGCCTTACCAACCAAACCCACCTATGGCGAGTATGCCTTGGCCTTATGGTGTTAACTTTGGCTACCCAAATTCCGTGCCGTGTCATTCTTGCTGTAACCATAATGCTGCTGGTTATAATGGTTTCAGACCCTCCTACCCTCAAACTCCAATGCCATCACCTGTATATTTTGCCGGTGGTTATCCTGCTCCATATCACGAGGCCTTCCCCGTCCATTATATTCCTCCTCCTCATTATTCTATGGAGCTTCCTAAATATGAATATGACAAGGCCATGCTGGGAAGTCATCACTGTTGTGGATGTCCTAATCACAGCCACCACAATGCAAATAAGGGTGTGAAGATTGAAGAACAAGAATCACCAGATGTTGTTGAAAAGCAGGCAAATGAATCATTAGCTCCAGCTCAGATGAAGAACTACCCTTATCCAATTTTGTGGATTCCGCCAGAGTACATGAAGAGTGGGGAGCGAAGCAAGCTTTCTGGTCCGGAGATTGTAGAGCAAAAGAAGAATCCAGGTGATGAAAGGCCTCCTGCGAGTTTGAAATCTCATGAAGAAGATCAAAGGCGTGGTTTGTTACCTTTTGACATGGACAACATTAAATCTTTGATGCAAGGTGGAAATGGGGAGCGGGTTCAGGATCAACGGAGTGAGGACAAGAAAAAGGAAAATCCATTTCCAAGTTTTTGGATGCCCTCCTATGGCAATAGCCATGATGGAGCTGGAAAGAAGGACAAGGACATGGATGCATATCAGCACAAGCAGAATGGAGAGCGAAAGTCGCAACTCCCATTCCCATTCTTCTGGTTCCCTTTTGAAAATAAGCAGAAGGATGTTGGAATGGAGGAGAAGGAGAATGAGGGAAGTAAGAAGGTTGATGCTACTGCAATGATTGTTCCAACGAAGCAGGCTGAGAGTAGTGACAATGGAACCAGAGTTAATGAAGGTAAATCTGCTGCCCCAGGTGTTCTAGAGCGAAAGGAAAAAGATGCTAATCAGAAAGTCATACCGGTGAAGCAAATGGAGCTACCTAAAAAGGAGGATGACTCTGAAGACACTAAGAGAAGAACAAGAGAAGTCCCTGTGAAGCATGTGGATGACAATTTAGCTAACAAATCTTCTGGTAGCAGTGCTCAAAGCCAGTCCTCTTCCCCAAAGAAGACAACGAAGCTACCTCCTGTTTGTCTGAGAGTTGATCCTTTACCAAGTAAGAAGAAGAATGGTGGTGGTAGTTCCAGATCTCCTAGTCCTCCCGGTCATAAAAAAGTCCAAAAAGAGACTTCAACCGACACTGCCAAGGCCTCTGCTCCGTGTAGCTTGCCAGAGAAGTTACAACAAACTCAACAGCCCCACGATTGTATTTCAAACCATGGAAAGGAGGTGGCACCATCCAAGGTGGAGAAAGTTATTGAGGTAGCTGATAAGGGAATCAGCGAAAAAAAAGATTCAATGCATGCATCTCAGATTCCTGTTGATTGTAAAGAGGCTTCTACTAAGCCAACGGTTGGGAAAGCCGGAAAAGATGGAAGTAAATGCGAGTTCAATGAGGATCAAGGAACAGGGAAGAGTGGAGATACAACAGCTCAGAATGTGGAAGAGGGGAAGAATACTACGGAGTCTGCTAAATCAGATGCTGCTGGAAGTAACTTCCAGAAAAAGAGGCTATCAGATGTAGCAGCTGCTGTCCTTATTCAATCTGCCTGCCGTGGGTTCATGGTGAGGAGGTGGGAACCATTGAAGAAACTGAAGCAGATAGCTGAGCTACGTGAGCAAGTGAATGAAATTCGGAATCAAATCACATCTCTGGAGAGCTCTGATCTCAAGAAAAATGACAATCAACGAGTGGCAATTGGAGAAACCATCATGAGACTTCTTCTAAGACTGGATTCGATTCAGGGTTTGCTCCCTAGTGTGAGAGAGATAAGAAGATCCTTGGCAAGGGAGCTTGTACTTCTGCAGGAAAAGCTTGATGATATAACGTCCAAGAAATCACAAGATACAGCAGAAGAGGCTTCCATTGTTAAAACTGTGGAAGAGATCAATTCCAATGGAAACACCAGTGTCTACATGTCGGAGCAGCAAGTAGAGGAAGCAGAAAAAGTTCATGAAGAATTCCCTGCTGGTGTCAGCGGTAACAGTCAAGTTGACACAGAGCCTTGCCAGGGGCAGGTGACACACACCATGGAATCGCTCCCAGTGGAAGTCAAGGTACCAGAACTCCCTGAACATAGAGAGCTGGACACAGCATCTGAGAACAGTCCGTACGAACTACCTGTGGCAGTGGTGGCAGATCCGGTAGTGGCCAGTGATGCTGCTGATCATGAGCAATGTGGTGAAGCTCCCTCTCCGGCCGAAGACAAGGCAGACCATAGTGTGGTTTCCGCTCCTGAACTTCACGCGATACCTCCAGAGTCGATTGAGGAGTTGTGCGACGTTGCAGTTGACAATGAACCTGCCGCCTCAGAGCCTGAAAAGGTTGAACCATTAGAGATGAGCAAGTGTGAATTGGAACAAGGTGGAGAGGTAGAAATCACGATGTCACCAGATATTGCTTCTCCAATCGCCACTGATAATGTGATTGATGAGAAAGAAGCGGTAATTCAGGAGCAGGCAGACGCAAAACTGCCACTAGGCAAAACCGCTGGAGACAGTGGTGCAGTATCTGAGTTGAAAAAAGATGAAGAAGTCCGTATAGAGAAGGAGAATGAAATCTCAGAAAGTGAAGAGGAAAGTCAAGGAGTACCTCTACCACAGCAACTACAAGAGGGTACAATGAAGGAGGGATGTGAAGTTGATAAGGGATTTCGAGTACTTGATCCAGAAGCCGAGCAACAGCACCAAAACGATGCAAATAAAGATGGTCTTCTGCCGGTGGTCTCTCAAACATTCGAATCCCAAGCATTGAACTTACCTGTTGAGACAAGCACTCATGATGTGTGGCATGAAAATGGACCTTCAGAGCTAATTGATGGTGGTGATACTGGCTTTTTGATATTGGGTGATGCCGACATGCCTAATCAGGATGAAGTACGAGTGGAGAGAAGTGGAGAAGAGTCGGAAGACTATAAGAACTTGCAAGTAGTAACAGTAGAAGACAATACAGAGATGCAAGAGAGCAAAGCTGAAAGCAGGGACGTTGATAAGGAACAGTCAAATGCTGCTGACCACGCCAAAGAGAATGTCCTCCTCGAAAAGAGCGAGTCATTGCCTGCACCATCAATTGCAACCGAGGTTTCCTCCGGTGATGGAATTGTCGCGGGAGTCGAAGGTGCCAGAAAGCTAATCGAGGAGAATGAGAAGCTGAGGGAAACAATGCAGACGTTAATGGTAGCAGGAAAAGACCAGTTACAAGTGATATCCGACCTCACCGGTAGAGTGAAGGATTTGGAGAAAAAGCTGGCCAAGAAGAAGAAACTAAGGACAAGAAGGTGTAGTAGGGCAGCAACATCTCGGTCTTCCTGTGTCAAGCCATCAAGCAATCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0002376 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005911 GO:0006457 GO:0006914 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009791 GO:0009814 GO:0009817 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010035 GO:0010228 GO:0010506 GO:0010508 GO:0010941 GO:0010942 GO:0012502 GO:0019222 GO:0022414 GO:0030054 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0043067 GO:0043068 GO:0043207 GO:0044237 GO:0044248 GO:0045087 GO:0046677 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0061458 GO:0061919 GO:0065007 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAG IQ

Protein Analysis

1188

Amino Acids

130.94

Weight (kDa)

5.08

Isoelectric Point (pI)

60.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAG	PF02179	611 - 684	2.7e-09	BAG domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46240
fragaria_vesca	FvH4_7g15690 FvH4_7g15690
malus_domestica	MD01G1073600.v1.1
prunus_persica	Prupe.2G181700_v2.0.a1
pyrus_communis	pycom01g10280
rosa_chinensis	RchiOBHm_Chr1g0358421
rosa_laevigata	RLG00000027961
rosa_multiflora	Rmu_sc0041976.1_g000002 Rmu_ssc0000348.1_g000008
rosa_roxburghii	Rroxscaffold_4G00297950
rosa_rugosa	Rorug01G0261700 Rorug01G0261800
rosa_samantha	Rh1AG275900 Rh1BG242700 Rh1CG259700 Rh1DG271100
rosa_wichuraiana	Rw1G024570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	195
AarI	CACCTGC	1 cut(s)	2236
Acc36I	ACCTGC	2 cut(s)	2236, 2539
Acc65I	GGTACC	1 cut(s)	2287
AccB1I	GGYRCC	3 cut(s)	1462, 2287, 3347
AccB7I	CCANNNNNTGG	2 cut(s)	1583, 2452
AccBSI	CCGCTC	2 cut(s)	709, 2462
AccI	GTMKAC	1 cut(s)	2142
AccII	CGCG	2 cut(s)	2477, 3335
AccIII	TCCGGA	1 cut(s)	565
AciI	CCGC	9 cut(s)	80, 521, 709, 2208, 2460, 2535, 2672, 2718, 3335
AclWI	GGATC	6 cut(s)	726, 1268, 1635, 2001, 2363, 2888
AcoI	YGGCCR	3 cut(s)	2379, 2427, 3477
AcsI	RAATTY	3 cut(s)	148, 1860, 2189
AcuI	CTGAAG	3 cut(s)	1149, 1844, 3018
AfaI	GTAC	9 cut(s)	14, 530, 2028, 2289, 2342, 2820, 2848, 2889, 3108
AfiI	CCNNNNNNNGG	9 cut(s)	103, 779, 1453, 1583, 1785, 2016, 2240, 2245, 2452
AflIII	ACRYGT	1 cut(s)	2145
AgeI	ACCGGT	2 cut(s)	1087, 3446
AjnI	CCWGG	3 cut(s)	592, 1039, 2238
AleI	CACNNNNGTG	1 cut(s)	372
Alw21I	GWGCWC	2 cut(s)	1213, 1892
Alw26I	GTCTC	5 cut(s)	1349, 1939, 2718, 2959, 2990
AlwI	GGATC	6 cut(s)	726, 1268, 1635, 2001, 2363, 2888
AlwNI	CAGNNNCTG	5 cut(s)	1712, 1760, 2327, 2546, 2741
Ama87I	CYCGRG	1 cut(s)	35
Aor13HI	TCCGGA	1 cut(s)	565
AoxI	GGCC	8 cut(s)	119, 279, 348, 605, 1377, 2379, 2427, 3477
ApeKI	GCWGC	9 cut(s)	185, 1034, 1712, 1754, 1757, 2155, 2390, 3236, 3518
ApoI	RAATTY	3 cut(s)	148, 1860, 2189
ArsI	GACNNNNNNTTYG	2 cut(s)	3243, 3275
AsiGI	ACCGGT	2 cut(s)	1087, 3446
Asp700I	GAANNNNTTC	1 cut(s)	2178
Asp718I	GGTACC	1 cut(s)	2287
AspS9I	GGNCC	2 cut(s)	563, 3029
AsuC2I	CCSGG	1 cut(s)	1332
AsuII	TTCGAA	1 cut(s)	2967
AvaI	CYCGRG	1 cut(s)	35
AvaII	GGWCC	2 cut(s)	563, 3029
BalI	TGGCCA	2 cut(s)	2381, 3479
BanI	GGYRCC	3 cut(s)	1462, 2287, 3347
BanII	GRGCYC	1 cut(s)	1892
BarI	GAAGNNNNNNTAC	4 cut(s)	1549, 1581, 2271, 2303
BauI	CACGAG	1 cut(s)	275
BbsI	GAAGAC	7 cut(s)	1137, 1244, 2439, 2933, 3144, 3177, 3525
Bbv12I	GWGCWC	2 cut(s)	1213, 1892
BbvCI	CCTCAGC	1 cut(s)	3380
BbvI	GCAGC	9 cut(s)	172, 1021, 1699, 1744, 1766, 2167, 2377, 3223, 3530
BceAI	ACGGC	2 cut(s)	142, 1767
BciT130I	CCWGG	3 cut(s)	594, 1041, 2240
BclI	TGATCA	1 cut(s)	2395
BcnI	CCSGG	1 cut(s)	1332
BcoDI	GTCTC	5 cut(s)	1349, 1939, 2718, 2959, 2990
BfaI	CTAG	5 cut(s)	1049, 1323, 1986, 2708, 3562
BfmI	CTRYAG	1 cut(s)	2033
BfuAI	ACCTGC	2 cut(s)	2236, 2539
BglII	AGATCT	1 cut(s)	1316
BlpI	GCTNAGC	1 cut(s)	1836
BmcAI	AGTACT	1 cut(s)	2889
Bme1390I	CCNGG	4 cut(s)	594, 1041, 1332, 2240
Bme18I	GGWCC	2 cut(s)	563, 3029
BmeT110I	CYCGRG	1 cut(s)	35
BmgT120I	GGNCC	2 cut(s)	563, 3029
BmiI	GGNNCC	6 cut(s)	887, 1009, 1464, 1809, 2289, 3349
BmrFI	CCNGG	4 cut(s)	594, 1041, 1332, 2240
BmrI	ACTGGG	1 cut(s)	2267
BmuI	ACTGGG	1 cut(s)	2267
BpiI	GAAGAC	7 cut(s)	1137, 1244, 2439, 2933, 3144, 3177, 3525
BplI	GAGNNNNNCTC	4 cut(s)	1109, 1141, 3299, 3331
BpmI	CTGGAG	4 cut(s)	462, 1904, 2469, 2742
Bpu10I	CCTNAGC	1 cut(s)	3380
Bpu1102I	GCTNAGC	1 cut(s)	1836
Bpu14I	TTCGAA	1 cut(s)	2967
BpuEI	CTTGAG	1 cut(s)	1883
BpuMI	CCSGG	1 cut(s)	1332
BsaAI	YACGTR	1 cut(s)	1844
BsaBI	GATNNNNATC	2 cut(s)	828, 1071
BsaI	GGTCTC	1 cut(s)	2959
BsaWI	WCCGGW	5 cut(s)	565, 1087, 2371, 3317, 3446
BsaXI	ACNNNNNCTCC	2 cut(s)	2280, 2310
Bsc4I	CCNNNNNNNGG	9 cut(s)	103, 779, 1453, 1583, 1785, 2016, 2240, 2245, 2452
Bse118I	RCCGGY	4 cut(s)	251, 1087, 2947, 3446
Bse1I	ACTGG	7 cut(s)	1219, 1965, 2136, 2273, 2382, 3064, 3421
Bse3DI	GCAATG	3 cut(s)	972, 2411, 3281
Bse8I	GATNNNNATC	2 cut(s)	828, 1071
BseAI	TCCGGA	1 cut(s)	565
BseBI	CCWGG	3 cut(s)	594, 1041, 2240
BseGI	GGATG	9 cut(s)	383, 774, 829, 916, 1126, 1180, 1466, 2867, 3106
BseJI	GATNNNNATC	2 cut(s)	828, 1071
BseLI	CCNNNNNNNGG	9 cut(s)	103, 779, 1453, 1583, 1785, 2016, 2240, 2245, 2452
BseMI	GCAATG	3 cut(s)	972, 2411, 3281
BseNI	ACTGG	7 cut(s)	1219, 1965, 2136, 2273, 2382, 3064, 3421
BseRI	GAGGAG	7 cut(s)	294, 297, 938, 1813, 2513, 3254, 3380
BseX3I	CGGCCG	1 cut(s)	2427
BseXI	GCAGC	9 cut(s)	172, 1021, 1699, 1744, 1766, 2167, 2377, 3223, 3530
BseYI	CCCAGC	1 cut(s)	355
BsgI	GTGCAG	2 cut(s)	2754, 3273
Bsh1236I	CGCG	2 cut(s)	2477, 3335
Bsh1285I	CGRYCG	1 cut(s)	2430
BshFI	GGCC	8 cut(s)	121, 281, 350, 607, 1379, 2381, 2429, 3479
BshNI	GGYRCC	3 cut(s)	1462, 2287, 3347
BshTI	ACCGGT	2 cut(s)	1087, 3446
BsiEI	CGRYCG	1 cut(s)	2430
BsiHKAI	GWGCWC	2 cut(s)	1213, 1892
BsiHKCI	CYCGRG	1 cut(s)	35
BsiWI	CGTACG	1 cut(s)	2340
BslFI	GGGAC	2 cut(s)	1142, 3224
BslI	CCNNNNNNNGG	9 cut(s)	103, 779, 1453, 1583, 1785, 2016, 2240, 2245, 2452
BsmAI	GTCTC	5 cut(s)	1349, 1939, 2718, 2959, 2990
BsmFI	GGGAC	2 cut(s)	1142, 3224
BsnI	GGCC	8 cut(s)	121, 281, 350, 607, 1379, 2381, 2429, 3479
Bso31I	GGTCTC	1 cut(s)	2959
BsoBI	CYCGRG	1 cut(s)	35
Bsp119I	TTCGAA	1 cut(s)	2967
Bsp1286I	GDGCHC	2 cut(s)	1213, 1892
Bsp13I	TCCGGA	1 cut(s)	565
Bsp1407I	TGTACA	1 cut(s)	12
Bsp1720I	GCTNAGC	1 cut(s)	1836
Bsp19I	CCATGG	2 cut(s)	1447, 2259
BspACI	CCGC	9 cut(s)	80, 521, 709, 2208, 2460, 2535, 2672, 2718, 3335
BspANI	GGCC	8 cut(s)	121, 281, 350, 607, 1379, 2381, 2429, 3479
BspEI	TCCGGA	1 cut(s)	565
BspFNI	CGCG	2 cut(s)	2477, 3335
BspHI	TCATGA	5 cut(s)	628, 1941, 2182, 2398, 3007
BspLI	GGNNCC	6 cut(s)	887, 1009, 1464, 1809, 2289, 3349
BspMAI	CTGCAG	1 cut(s)	2037
BspMI	ACCTGC	2 cut(s)	2236, 2539
BspPI	GGATC	6 cut(s)	726, 1268, 1635, 2001, 2363, 2888
BspT104I	TTCGAA	1 cut(s)	2967
BspT107I	GGYRCC	3 cut(s)	1462, 2287, 3347
BspTNI	GGTCTC	1 cut(s)	2959
BsrBI	CCGCTC	2 cut(s)	709, 2462
BsrDI	GCAATG	3 cut(s)	972, 2411, 3281
BsrFI	RCCGGY	4 cut(s)	251, 1087, 2947, 3446
BsrGI	TGTACA	1 cut(s)	12
BsrI	ACTGG	7 cut(s)	1219, 1965, 2136, 2273, 2382, 3064, 3421
BssAI	RCCGGY	4 cut(s)	251, 1087, 2947, 3446
BssSI	CACGAG	1 cut(s)	275
BssT1I	CCWWGG	6 cut(s)	116, 1374, 1447, 1470, 2010, 2259
Bst2BI	CACGAG	1 cut(s)	275
Bst2UI	CCWGG	3 cut(s)	594, 1041, 2240
Bst4CI	ACNGT	8 cut(s)	371, 1582, 2107, 2216, 2336, 2729, 3166, 3228
Bst6I	CTCTTC	8 cut(s)	530, 1231, 1637, 1668, 2079, 2106, 2796, 3123
BstAUI	TGTACA	1 cut(s)	12
BstBAI	YACGTR	1 cut(s)	1844
BstBI	TTCGAA	1 cut(s)	2967
BstC8I	GCNNGC	9 cut(s)	459, 554, 987, 1397, 1533, 1780, 2688, 3288, 3477
BstDSI	CCRYGG	3 cut(s)	1447, 1783, 2259
BstENI	CCTNNNNNAGG	1 cut(s)	2014
BstF5I	GGATG	9 cut(s)	383, 774, 829, 916, 1126, 1180, 1466, 2867, 3106
BstFNI	CGCG	2 cut(s)	2477, 3335
BstMAI	GTCTC	5 cut(s)	1349, 1939, 2718, 2959, 2990
BstMCI	CGRYCG	1 cut(s)	2430
BstMWI	GCNNNNNNNGC	9 cut(s)	553, 859, 1102, 1846, 2041, 2087, 2363, 2387, 3245
BstNI	CCWGG	3 cut(s)	594, 1041, 2240
BstNSI	RCATGY	4 cut(s)	1172, 1535, 2149, 3091
BstSCI	CCNGG	4 cut(s)	592, 1039, 1330, 2238
BstSFI	CTRYAG	1 cut(s)	2033
BstUI	CGCG	2 cut(s)	2477, 3335
BstV1I	GCAGC	9 cut(s)	172, 1021, 1699, 1744, 1766, 2167, 2377, 3223, 3530
BstV2I	GAAGAC	7 cut(s)	1137, 1244, 2439, 2933, 3144, 3177, 3525
BstX2I	RGATCY	3 cut(s)	1316, 2006, 2368
BstXI	CCANNNNNNTGG	3 cut(s)	513, 765, 882
BstYI	RGATCY	3 cut(s)	1316, 2006, 2368
BstZI	CGGCCG	1 cut(s)	2427
BsuRI	GGCC	8 cut(s)	121, 281, 350, 607, 1379, 2381, 2429, 3479
BtgI	CCRYGG	3 cut(s)	1447, 1783, 2259
BtsCI	GGATG	9 cut(s)	383, 774, 829, 916, 1126, 1180, 1466, 2867, 3106
BtsI	GCAGTG	3 cut(s)	1213, 1368, 2364
BtsIMutI	CAGTG	9 cut(s)	367, 1213, 1368, 2143, 2280, 2364, 2389, 2643, 2734
BveI	ACCTGC	2 cut(s)	2236, 2539
Cac8I	GCNNGC	9 cut(s)	459, 554, 987, 1397, 1533, 1780, 2688, 3288, 3477
CaiI	CAGNNNCTG	5 cut(s)	1712, 1760, 2327, 2546, 2741
CciI	TCATGA	5 cut(s)	628, 1941, 2182, 2398, 3007
Cfr10I	RCCGGY	4 cut(s)	251, 1087, 2947, 3446
Cfr13I	GGNCC	2 cut(s)	563, 3029
CseI	GACGC	1 cut(s)	2702
Csp6I	GTAC	9 cut(s)	13, 529, 2027, 2288, 2341, 2819, 2847, 2888, 3107
CspAI	ACCGGT	2 cut(s)	1087, 3446
CviQI	GTAC	9 cut(s)	13, 529, 2027, 2288, 2341, 2819, 2847, 2888, 3107
EaeI	YGGCCR	3 cut(s)	2379, 2427, 3477
EagI	CGGCCG	1 cut(s)	2427
Eam1104I	CTCTTC	8 cut(s)	530, 1231, 1637, 1668, 2079, 2106, 2796, 3123
EarI	CTCTTC	8 cut(s)	530, 1231, 1637, 1668, 2079, 2106, 2796, 3123
EciI	GGCGGA	2 cut(s)	69, 510
Ecl136II	GAGCTC	1 cut(s)	1890
EclXI	CGGCCG	1 cut(s)	2427
Eco130I	CCWWGG	6 cut(s)	116, 1374, 1447, 1470, 2010, 2259
Eco147I	AGGCCT	3 cut(s)	281, 607, 1379
Eco24I	GRGCYC	1 cut(s)	1892
Eco31I	GGTCTC	1 cut(s)	2959
Eco32I	GATATC	1 cut(s)	3435
Eco47I	GGWCC	2 cut(s)	563, 3029
Eco52I	CGGCCG	1 cut(s)	2427
Eco53kI	GAGCTC	1 cut(s)	1890
Eco57I	CTGAAG	3 cut(s)	1149, 1844, 3018
Eco88I	CYCGRG	1 cut(s)	35
EcoICRI	GAGCTC	1 cut(s)	1890
EcoNI	CCTNNNNNAGG	1 cut(s)	2014
EcoRI	GAATTC	1 cut(s)	2189
EcoRII	CCWGG	3 cut(s)	592, 1039, 2238
EcoRV	GATATC	1 cut(s)	3435
EcoT14I	CCWWGG	6 cut(s)	116, 1374, 1447, 1470, 2010, 2259
EcoT22I	ATGCAT	3 cut(s)	829, 1533, 1537
EcoT38I	GRGCYC	1 cut(s)	1892
ErhI	CCWWGG	6 cut(s)	116, 1374, 1447, 1470, 2010, 2259
FalI	AAGNNNNNCTT	2 cut(s)	2925, 2957
FaqI	GGGAC	2 cut(s)	1142, 3224
FauI	CCCGC	2 cut(s)	702, 3328
FbaI	TGATCA	1 cut(s)	2395
FblI	GTMKAC	1 cut(s)	2142
FokI	GGATG	9 cut(s)	390, 781, 836, 923, 1133, 1187, 1453, 2874, 3113
FriOI	GRGCYC	1 cut(s)	1892
FspBI	CTAG	5 cut(s)	1049, 1323, 1986, 2708, 3562
GsaI	CCCAGC	1 cut(s)	359
GsuI	CTGGAG	4 cut(s)	462, 1904, 2469, 2742
HaeIII	GGCC	8 cut(s)	121, 281, 350, 607, 1379, 2381, 2429, 3479
HgaI	GACGC	1 cut(s)	2702
HincII	GTYRAC	3 cut(s)	133, 2224, 2521
HindII	GTYRAC	3 cut(s)	133, 2224, 2521
HindIII	AAGCTT	2 cut(s)	554, 2042
HpaI	GTTAAC	1 cut(s)	133
Hpy166II	GTNNAC	4 cut(s)	133, 2143, 2224, 2521
Hpy8I	GTNNAC	4 cut(s)	133, 2143, 2224, 2521
Hpy99I	CGWCG	1 cut(s)	2513
HpyCH4III	ACNGT	8 cut(s)	371, 1582, 2107, 2216, 2336, 2729, 3166, 3228
HpyCH4IV	ACGT	5 cut(s)	1843, 2057, 2511, 3213, 3398
HpyF10VI	GCNNNNNNNGC	9 cut(s)	553, 859, 1102, 1846, 2041, 2087, 2363, 2387, 3245
HpySE526I	ACGT	5 cut(s)	1843, 2057, 2511, 3213, 3398
Kpn2I	TCCGGA	1 cut(s)	565
KpnI	GGTACC	1 cut(s)	2291
Ksp22I	TGATCA	1 cut(s)	2395
KspAI	GTTAAC	1 cut(s)	133
Lsp1109I	GCAGC	9 cut(s)	172, 1021, 1699, 1744, 1766, 2167, 2377, 3223, 3530
MaeI	CTAG	5 cut(s)	1049, 1323, 1986, 2708, 3562
MaeII	ACGT	5 cut(s)	1843, 2057, 2511, 3213, 3398
MbiI	CCGCTC	2 cut(s)	709, 2462
MfeI	CAATTG	2 cut(s)	1926, 3297
MflI	RGATCY	3 cut(s)	1316, 2006, 2368
MhlI	GDGCHC	2 cut(s)	1213, 1892
MlsI	TGGCCA	2 cut(s)	2381, 3479
MluNI	TGGCCA	2 cut(s)	2381, 3479
MlyI	GAGTC	6 cut(s)	1118, 1703, 2498, 3140, 3287, 3348
MmeI	TCCRAC	5 cut(s)	895, 1001, 2130, 3114, 3462
Mox20I	TGGCCA	2 cut(s)	2381, 3479
Mph1103I	ATGCAT	3 cut(s)	829, 1533, 1537
MroI	TCCGGA	1 cut(s)	565
MroXI	GAANNNNTTC	1 cut(s)	2178
MscI	TGGCCA	2 cut(s)	2381, 3479
MseI	TTAA	5 cut(s)	132, 678, 1017, 2100, 3401
MslI	CAYNNNNRTG	5 cut(s)	372, 399, 1088, 1173, 3024
Msp20I	TGGCCA	2 cut(s)	2381, 3479
MspA1I	CMGCKG	3 cut(s)	1757, 2208, 2720
MspR9I	CCNGG	4 cut(s)	594, 1041, 1332, 2240
MunI	CAATTG	2 cut(s)	1926, 3297
MvaI	CCWGG	3 cut(s)	594, 1041, 2240
MvnI	CGCG	2 cut(s)	2477, 3335
MwoI	GCNNNNNNNGC	9 cut(s)	553, 859, 1102, 1846, 2041, 2087, 2363, 2387, 3245
NciI	CCSGG	1 cut(s)	1332
NcoI	CCATGG	2 cut(s)	1447, 2259
NlaIV	GGNNCC	6 cut(s)	887, 1009, 1464, 1809, 2289, 3349
NmeAIII	GCCGAG	1 cut(s)	2929
NmuCI	GTSAC	3 cut(s)	998, 2248, 2616
NsiI	ATGCAT	3 cut(s)	829, 1533, 1537
NspI	RCATGY	4 cut(s)	1172, 1535, 2149, 3091
NspV	TTCGAA	1 cut(s)	2967
OliI	CACNNNNGTG	1 cut(s)	372
PaeI	GCATGC	1 cut(s)	1535
PagI	TCATGA	5 cut(s)	628, 1941, 2182, 2398, 3007
PaqCI	CACCTGC	1 cut(s)	2236
PceI	AGGCCT	3 cut(s)	281, 607, 1379
PciI	ACATGT	1 cut(s)	2145
PcsI	WCGNNNNNNNCGW	2 cut(s)	3273, 3339
PdmI	GAANNNNTTC	1 cut(s)	2178
Pfl23II	CGTACG	1 cut(s)	2340
PflMI	CCANNNNNTGG	2 cut(s)	1583, 2452
PinAI	ACCGGT	2 cut(s)	1087, 3446
PleI	GAGTC	6 cut(s)	1118, 1702, 2497, 3139, 3286, 3347
PpsI	GAGTC	6 cut(s)	1118, 1702, 2497, 3139, 3286, 3347
Ppu21I	YACGTR	1 cut(s)	1844
PscI	ACATGT	1 cut(s)	2145
PsiI	TTATAA	1 cut(s)	195
Psp124BI	GAGCTC	1 cut(s)	1892
Psp6I	CCWGG	3 cut(s)	592, 1039, 2238
PspFI	CCCAGC	1 cut(s)	355
PspGI	CCWGG	3 cut(s)	592, 1039, 2238
PspLI	CGTACG	1 cut(s)	2340
PspN4I	GGNNCC	6 cut(s)	887, 1009, 1464, 1809, 2289, 3349
PspPI	GGNCC	2 cut(s)	563, 3029
PsrI	GAACNNNNNNTAC	2 cut(s)	2324, 2356
PstI	CTGCAG	1 cut(s)	2037
PstNI	CAGNNNCTG	5 cut(s)	1712, 1760, 2327, 2546, 2741
PsuI	RGATCY	3 cut(s)	1316, 2006, 2368
PvuII	CAGCTG	1 cut(s)	1757
RsaI	GTAC	9 cut(s)	14, 530, 2028, 2289, 2342, 2820, 2848, 2889, 3108
RsaNI	GTAC	9 cut(s)	13, 529, 2027, 2288, 2341, 2819, 2847, 2888, 3107
RseI	CAYNNNNRTG	5 cut(s)	372, 399, 1088, 1173, 3024
SacI	GAGCTC	1 cut(s)	1892
SaqAI	TTAA	5 cut(s)	132, 678, 1017, 2100, 3401
Sau96I	GGNCC	2 cut(s)	563, 3029
ScaI	AGTACT	1 cut(s)	2889
SchI	GAGTC	6 cut(s)	1118, 1703, 2498, 3140, 3287, 3348
ScrFI	CCNGG	4 cut(s)	594, 1041, 1332, 2240
SduI	GDGCHC	2 cut(s)	1213, 1892
SfcI	CTRYAG	1 cut(s)	2033
SfuI	TTCGAA	1 cut(s)	2967
SinI	GGWCC	2 cut(s)	563, 3029
SmiMI	CAYNNNNRTG	5 cut(s)	372, 399, 1088, 1173, 3024
SmlI	CTYRAG	1 cut(s)	1898
SmoI	CTYRAG	1 cut(s)	1898
SphI	GCATGC	1 cut(s)	1535
SseBI	AGGCCT	3 cut(s)	281, 607, 1379
SsiI	CCGC	9 cut(s)	80, 521, 709, 2208, 2460, 2535, 2672, 2718, 3335
SspMI	CTAG	5 cut(s)	1049, 1323, 1986, 2708, 3562
SstI	GAGCTC	1 cut(s)	1892
StuI	AGGCCT	3 cut(s)	281, 607, 1379
StyD4I	CCNGG	4 cut(s)	592, 1039, 1330, 2238
StyI	CCWWGG	6 cut(s)	116, 1374, 1447, 1470, 2010, 2259
TaaI	ACNGT	8 cut(s)	371, 1582, 2107, 2216, 2336, 2729, 3166, 3228
TaiI	ACGT	5 cut(s)	1846, 2060, 2514, 3216, 3401
TaqI	TCGA	7 cut(s)	1967, 2492, 2884, 2967, 3267, 3342, 3363
TaqII	GACCGA	1 cut(s)	3519
TatI	WGTACW	4 cut(s)	12, 528, 2026, 2887
TauI	GCSGC	1 cut(s)	2537
Tru1I	TTAA	5 cut(s)	132, 678, 1017, 2100, 3401
Tru9I	TTAA	5 cut(s)	132, 678, 1017, 2100, 3401
TscAI	CASTG	9 cut(s)	374, 1213, 1375, 2143, 2280, 2364, 2389, 2650, 2734
TseFI	GTSAC	3 cut(s)	998, 2248, 2616
TseI	GCWGC	9 cut(s)	185, 1034, 1712, 1754, 1757, 2155, 2390, 3236, 3518
Tsp45I	GTSAC	3 cut(s)	998, 2248, 2616
TspGWI	ACGGA	6 cut(s)	142, 739, 1377, 1706, 2328, 2756
TspRI	CASTG	9 cut(s)	374, 1213, 1375, 2143, 2280, 2364, 2389, 2650, 2734
Van91I	CCANNNNNTGG	2 cut(s)	1583, 2452
VpaK11BI	GGWCC	2 cut(s)	563, 3029
XagI	CCTNNNNNAGG	1 cut(s)	2014
XapI	RAATTY	3 cut(s)	148, 1860, 2189
XbaI	TCTAGA	1 cut(s)	1048
XceI	RCATGY	4 cut(s)	1172, 1535, 2149, 3091
XcmI	CCANNNNNNNNNTGG	2 cut(s)	185, 797
XmiI	GTMKAC	1 cut(s)	2142
XmnI	GAANNNNTTC	1 cut(s)	2178
XspI	CTAG	5 cut(s)	1049, 1323, 1986, 2708, 3562
ZrmI	AGTACT	1 cut(s)	2889
Zsp2I	ATGCAT	3 cut(s)	829, 1533, 1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.