FvH4_7g15770

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0015878
Physical Location & Seq
Forward (+)
13620613 .. 13622365
1753 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g15770.t1

Sequence Viewer

Length: 909 bp
ATGGAGTTCTTGATCAAAAGCTGGTATAATGTTATCTGGCTTATCTTTTTTCTATCATCAACATCGTTTCTTCAAGCTTCATATGGCTATGATCCTGAGTCCTTGAGTGCTTTTTTTCATGATTATGCAAATACCAGTGTAAGGTATCCTCATACAGGCAAATTATACAATCTGTCTCTACCGGCTAATTTCTCCGGTATGGAAGCTTCATTTCTTAGGATCCGTAGTGCAAAGTTTTGGCTTGGAGGAGTAAATTTCAGTTCAGTTTATATACCACCACTGGTTGTACCAATGCCATATGTTAAAAGGATAGCTATAGTGTATGAGAATTTAGGCAATTGGTCTTCAGTTTACTATCAAGTGTCAAATTACAGATTGGTTGCTCCTGTTATTGGCTTCCTGGCTTATGATTCTAGTTCGAGTGCAGTAGGAACTCAAAAGATCAATTTTCTCACTCAGGGTGACTCAATTGTAATTCAGTTTCCTCATATTGATGTGCAAGAAGGGGAAATACCAAAGTGTGTGGAATTTGGTCCTGATGGGAGCTTTTGGATCAAAAACATGACCGGGGCAAATGAGTGTCATACACATGGTGAAGGGCATTTTTCCCTTGTTGTTCCATCTCCTATAACACCAACGCCAACGCCGACACCGACACCAAGGGCAACACGAAAGAACTCAGAGAAGTGGCGAAAAGGACTTATTGCTGGGATTTTTGGGTTGATTTTACTAGGGTTGGTAATGATAGGCATGTACAAGTTAGTGAGGAGGAGGCAACTTAGAGCTATGGAGAAGCAGTCTGAAAAAGGTGTGGGCTTCGATACATTCTGGGTTGGGAGTAGTAAAATGCCTTCTGCAGCAATGACTAGAACGCAACCATACCTTGAACAAGCAGAATATGCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

303

Amino Acids

33.93

Weight (kDa)

9.16

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1191 PF06697 32 - 207 1.4e-58 Protein of unknown function (DUF1191)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015878)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01140
fragaria_vesca FvH4_7g15770
malus_domestica MD01G1074500.v1.1 MD07G1143400.v1.1
prunus_persica Prupe.2G182600_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358561
rosa_laevigata RLG00000027946
rosa_multiflora Rmu_sc0001609.1_g000011
rosa_roxburghii Rroxscaffold_4G00297810
rosa_rugosa Rorug01G0262600
rosa_samantha Rh1AG277400 Rh1BG243700 Rh1CG260800 Rh1DG272000
rosa_wichuraiana Rw1G024640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 86, 214, 227, 560
AcsI RAATTY 3 cut(s) 253, 328, 527
AcuI CTGAAG 1 cut(s) 330
AdeI CACNNNGTG 1 cut(s) 593
AfaI GTAC 2 cut(s) 288, 755
AfiI CCNNNNNNNGG 3 cut(s) 141, 155, 392
AgsI TTSAA 2 cut(s) 74, 887
AjnI CCWGG 1 cut(s) 399
AluBI AGCT 6 cut(s) 21, 77, 206, 314, 546, 785
AluI AGCT 6 cut(s) 21, 77, 206, 314, 546, 785
Alw26I GTCTC 1 cut(s) 180
AlwI GGATC 4 cut(s) 86, 214, 227, 560
ApeKI GCWGC 1 cut(s) 857
ApoI RAATTY 3 cut(s) 253, 328, 527
AspS9I GGNCC 1 cut(s) 533
AsuC2I CCSGG 1 cut(s) 568
AsuHPI GGTGA 2 cut(s) 473, 605
AvaII GGWCC 1 cut(s) 533
BamHI GGATCC 1 cut(s) 219
BarI GAAGNNNNNNTAC 6 cut(s) 190, 222, 495, 527, 835, 867
BbsI GAAGAC 1 cut(s) 336
BbvI GCAGC 1 cut(s) 869
BccI CCATC 2 cut(s) 533, 628
BciT130I CCWGG 1 cut(s) 401
BciVI GTATCC 1 cut(s) 156
BclI TGATCA 1 cut(s) 12
BcnI CCSGG 1 cut(s) 568
BcoDI GTCTC 1 cut(s) 180
BfaI CTAG 3 cut(s) 414, 731, 867
BfmI CTRYAG 2 cut(s) 315, 855
BfuI GTATCC 1 cut(s) 156
BisI GCNGC 1 cut(s) 858
BlsI GCNGC 1 cut(s) 859
Bme1390I CCNGG 2 cut(s) 401, 568
Bme18I GGWCC 1 cut(s) 533
BmgT120I GGNCC 1 cut(s) 533
BmiI GGNNCC 1 cut(s) 221
BmrFI CCNGG 2 cut(s) 401, 568
BpiI GAAGAC 1 cut(s) 336
BpuEI CTTGAG 1 cut(s) 124
BpuMI CCSGG 1 cut(s) 568
BsaJI CCNNGG 2 cut(s) 567, 659
BsaWI WCCGGW 1 cut(s) 194
BsaXI ACNNNNNCTCC 2 cut(s) 782, 812
Bsc4I CCNNNNNNNGG 3 cut(s) 141, 155, 392
Bse118I RCCGGY 1 cut(s) 181
Bse1I ACTGG 2 cut(s) 135, 285
Bse3DI GCAATG 1 cut(s) 867
BseBI CCWGG 1 cut(s) 401
BseDI CCNNGG 2 cut(s) 567, 659
BseLI CCNNNNNNNGG 3 cut(s) 141, 155, 392
BseMI GCAATG 1 cut(s) 867
BseMII CTCAG 3 cut(s) 87, 470, 693
BseNI ACTGG 2 cut(s) 135, 285
BseRI GAGGAG 3 cut(s) 261, 781, 784
BseXI GCAGC 1 cut(s) 869
BseYI CCCAGC 1 cut(s) 707
BsgI GTGCAG 1 cut(s) 444
BsiSI CCGG 3 cut(s) 182, 195, 567
BslI CCNNNNNNNGG 3 cut(s) 141, 155, 392
BsmAI GTCTC 1 cut(s) 180
Bsp1407I TGTACA 1 cut(s) 753
Bsp143I GATC 5 cut(s) 12, 91, 219, 441, 552
BspCNI CTCAG 3 cut(s) 88, 469, 692
BspHI TCATGA 1 cut(s) 118
BspLI GGNNCC 1 cut(s) 221
BspMAI CTGCAG 1 cut(s) 859
BspPI GGATC 4 cut(s) 86, 214, 227, 560
BsrDI GCAATG 1 cut(s) 867
BsrFI RCCGGY 1 cut(s) 181
BsrGI TGTACA 1 cut(s) 753
BsrI ACTGG 2 cut(s) 135, 285
BssAI RCCGGY 1 cut(s) 181
BssECI CCNNGG 2 cut(s) 567, 659
BssMI GATC 5 cut(s) 12, 91, 219, 441, 552
BssT1I CCWWGG 1 cut(s) 659
Bst2UI CCWGG 1 cut(s) 401
BstAPI GCANNNNNTGC 1 cut(s) 899
BstAUI TGTACA 1 cut(s) 753
BstDEI CTNAG 5 cut(s) 96, 215, 456, 679, 779
BstENI CCTNNNNNAGG 1 cut(s) 153
BstKTI GATC 5 cut(s) 15, 94, 222, 444, 555
BstMAI GTCTC 1 cut(s) 180
BstMBI GATC 5 cut(s) 12, 91, 219, 441, 552
BstMWI GCNNNNNNNGC 1 cut(s) 899
BstNI CCWGG 1 cut(s) 401
BstNSI RCATGY 1 cut(s) 754
BstSCI CCNGG 2 cut(s) 399, 566
BstSFI CTRYAG 2 cut(s) 315, 855
BstV1I GCAGC 1 cut(s) 869
BstV2I GAAGAC 1 cut(s) 336
BstX2I RGATCY 1 cut(s) 219
BstYI RGATCY 1 cut(s) 219
BsuI GTATCC 1 cut(s) 156
BtsIMutI CAGTG 2 cut(s) 142, 278
CciI TCATGA 1 cut(s) 118
Cfr10I RCCGGY 1 cut(s) 181
Cfr13I GGNCC 1 cut(s) 533
Csp6I GTAC 2 cut(s) 287, 754
CspCI CAANNNNNGTGG 2 cut(s) 504, 539
CviAII CATG 4 cut(s) 119, 562, 590, 751
CviQI GTAC 2 cut(s) 287, 754
DdeI CTNAG 5 cut(s) 96, 215, 456, 679, 779
DpnI GATC 5 cut(s) 14, 93, 221, 443, 554
DpnII GATC 5 cut(s) 12, 91, 219, 441, 552
DraIII CACNNNGTG 1 cut(s) 593
Eco130I CCWWGG 1 cut(s) 659
Eco47I GGWCC 1 cut(s) 533
Eco57I CTGAAG 1 cut(s) 330
EcoNI CCTNNNNNAGG 1 cut(s) 153
EcoRII CCWGG 1 cut(s) 399
EcoT14I CCWWGG 1 cut(s) 659
ErhI CCWWGG 1 cut(s) 659
FaeI CATG 4 cut(s) 122, 565, 593, 754
FatI CATG 4 cut(s) 118, 561, 589, 750
FauNDI CATATG 2 cut(s) 82, 298
FbaI TGATCA 1 cut(s) 12
Fnu4HI GCNGC 1 cut(s) 858
Fsp4HI GCNGC 1 cut(s) 858
FspBI CTAG 3 cut(s) 414, 731, 867
GluI GCNGC 1 cut(s) 858
GsaI CCCAGC 1 cut(s) 711
HapII CCGG 3 cut(s) 182, 195, 567
Hin1II CATG 4 cut(s) 122, 565, 593, 754
HindIII AAGCTT 2 cut(s) 75, 204
HinfI GANTC 3 cut(s) 98, 410, 464
HpaII CCGG 3 cut(s) 182, 195, 567
HphI GGTGA 2 cut(s) 473, 605
Hpy166II GTNNAC 1 cut(s) 352
Hpy188I TCNGA 2 cut(s) 682, 802
Hpy188III TCNNGA 4 cut(s) 10, 95, 119, 536
Hpy8I GTNNAC 1 cut(s) 352
HpyAV CCTTC 3 cut(s) 497, 590, 861
HpyCH4V TGCA 5 cut(s) 128, 230, 425, 499, 857
HpyF10VI GCNNNNNNNGC 1 cut(s) 899
HpyF3I CTNAG 5 cut(s) 96, 215, 456, 679, 779
Hsp92II CATG 4 cut(s) 122, 565, 593, 754
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 5 cut(s) 12, 91, 219, 441, 552
LmnI GCTCC 3 cut(s) 388, 543, 907
Lsp1109I GCAGC 1 cut(s) 869
MaeI CTAG 3 cut(s) 414, 731, 867
MaeIII GTNAC 1 cut(s) 461
MalI GATC 5 cut(s) 14, 93, 221, 443, 554
MboI GATC 5 cut(s) 12, 91, 219, 441, 552
MboII GAAGA 2 cut(s) 62, 336
MfeI CAATTG 2 cut(s) 337, 468
MflI RGATCY 1 cut(s) 219
MlyI GAGTC 2 cut(s) 107, 458
MnlI CCTC 6 cut(s) 159, 239, 495, 759, 762, 765
MseI TTAA 1 cut(s) 303
MslI CAYNNNNRTG 3 cut(s) 123, 492, 588
MspI CCGG 3 cut(s) 182, 195, 567
MspR9I CCNGG 2 cut(s) 401, 568
MunI CAATTG 2 cut(s) 337, 468
MvaI CCWGG 1 cut(s) 401
MwoI GCNNNNNNNGC 1 cut(s) 899
NciI CCSGG 1 cut(s) 568
NdeI CATATG 2 cut(s) 82, 298
NdeII GATC 5 cut(s) 12, 91, 219, 441, 552
NlaIII CATG 4 cut(s) 122, 565, 593, 754
NlaIV GGNNCC 1 cut(s) 221
NmuCI GTSAC 1 cut(s) 461
NspI RCATGY 1 cut(s) 754
PagI TCATGA 1 cut(s) 118
PcsI WCGNNNNNNNCGW 2 cut(s) 644, 650
PfeI GAWTC 1 cut(s) 410
PkrI GCNGC 1 cut(s) 859
PleI GAGTC 2 cut(s) 106, 458
PpsI GAGTC 2 cut(s) 106, 458
Psp6I CCWGG 1 cut(s) 399
PspFI CCCAGC 1 cut(s) 707
PspGI CCWGG 1 cut(s) 399
PspN4I GGNNCC 1 cut(s) 221
PspPI GGNCC 1 cut(s) 533
PstI CTGCAG 1 cut(s) 859
PsuI RGATCY 1 cut(s) 219
RsaI GTAC 2 cut(s) 288, 755
RsaNI GTAC 2 cut(s) 287, 754
RseI CAYNNNNRTG 3 cut(s) 123, 492, 588
SaqAI TTAA 1 cut(s) 303
SatI GCNGC 1 cut(s) 858
Sau3AI GATC 5 cut(s) 12, 91, 219, 441, 552
Sau96I GGNCC 1 cut(s) 533
SchI GAGTC 2 cut(s) 107, 458
ScrFI CCNGG 2 cut(s) 401, 568
SetI ASST 9 cut(s) 23, 79, 146, 208, 316, 548, 787, 811, 885
SfcI CTRYAG 2 cut(s) 315, 855
SinI GGWCC 1 cut(s) 533
SmiMI CAYNNNNRTG 3 cut(s) 123, 492, 588
SmlI CTYRAG 1 cut(s) 103
SmoI CTYRAG 1 cut(s) 103
SspMI CTAG 3 cut(s) 414, 731, 867
StyD4I CCNGG 2 cut(s) 399, 566
StyI CCWWGG 1 cut(s) 659
TaqI TCGA 2 cut(s) 419, 819
TatI WGTACW 1 cut(s) 753
TfiI GAWTC 1 cut(s) 410
Tru1I TTAA 1 cut(s) 303
Tru9I TTAA 1 cut(s) 303
TscAI CASTG 2 cut(s) 142, 285
TseFI GTSAC 1 cut(s) 461
TseI GCWGC 1 cut(s) 857
Tsp45I GTSAC 1 cut(s) 461
TspDTI ATGAA 3 cut(s) 69, 107, 198
TspGWI ACGGA 1 cut(s) 212
TspRI CASTG 2 cut(s) 142, 285
VpaK11BI GGWCC 1 cut(s) 533
XagI CCTNNNNNAGG 1 cut(s) 153
XapI RAATTY 3 cut(s) 253, 328, 527
XceI RCATGY 1 cut(s) 754
XspI CTAG 3 cut(s) 414, 731, 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.