MD01G1074500.v1.1

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0015878
Physical Location & Seq
Forward (+)
18072551 .. 18073456
906 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1074500.v1.1.491

Sequence Viewer

Length: 906 bp
ATGGAGTTCTTCAACTGGTGCATAATCTGGCTGATGATCTTACTTTCTTTGTCATTTCCATTGCGGTCATGCGCGCAAGCCTCGAATGGCTATGATCCTTTATCCTTGACTAATTTCCTCCGTGATTACGCAAATGCAAATCTAAGTAACCCTCACACCGGCACGCTGAACAACATTTCTCTCCCGGCTAATTTTTCCGGCATGGAAGCTTCATTTGTTAGGATCCTTACTGCAAAGTTTTGGAGTAGAGGTGCAAATTTCAGTTCATTTTATATCCCACCAAGGGTTATACCAATACCTTCTGGCAGAAGGTTAGCTATAGTGTTTGAAAATTTAGGCAATTGGTCTTCACTTTACTACAAAGTGTCAAATTATACATTGGTTGCTCCTGTTGTTGGATTCATGGCTTATGATTCTCCAAATGCAACAGCAATTGGCAACCAGAAGCTCACTTTCACTACCGAGGGTGACCCCATCACAATCCGGTTTCCTCACATTGATGCTGCGGAAGGGGAGAATGTGACACGAAAATGTGTCCAATTTGGTGACGGGGGGAGCTTTGAGATCACTAACATGATTAGTGAAAAAGAGTGCATTACGCGCGGTCTAGGGCATTTCAGTGTTGTTGTTCCATCCCCGTCAGCACCAGCACCAGAACCGTGGCCAGGGTGGAAGAAAAAGAGGCACCGTAAACTGTTTGTGATTGGAATTGTGTTTGGGTTAGCATTTTTGGGGTTGATAATGATAGTTATATTCAAGTTGCAGACGAGGAGGAAACTTAAATCTATGGAGAAGCAATCTGAAAAGGATGTGGCGTTCGATACATTTTGGGTTGGGAGAAGTAAAATGCCTTCTGCATCCATGACTAGAACTCAACCCTACCTTGAACATGAAGATGTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

302

Amino Acids

33.78

Weight (kDa)

9.35

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1191 PF06697 35 - 211 1.7e-60 Protein of unknown function (DUF1191)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015878)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01140
fragaria_vesca FvH4_7g15770
malus_domestica MD01G1074500.v1.1 MD07G1143400.v1.1
prunus_persica Prupe.2G182600_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358561
rosa_laevigata RLG00000027946
rosa_multiflora Rmu_sc0001609.1_g000011
rosa_roxburghii Rroxscaffold_4G00297810
rosa_rugosa Rorug01G0262600
rosa_samantha Rh1AG277400 Rh1BG243700 Rh1CG260800 Rh1DG272000
rosa_wichuraiana Rw1G024640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 684
AccII CGCG 3 cut(s) 74, 601, 603
AciI CCGC 3 cut(s) 64, 506, 603
AclWI GGATC 3 cut(s) 89, 217, 230
AcoI YGGCCR 1 cut(s) 662
AcsI RAATTY 2 cut(s) 256, 331
AfiI CCNNNNNNNGG 4 cut(s) 158, 283, 395, 665
AgsI TTSAA 4 cut(s) 13, 329, 757, 887
AjnI CCWGG 1 cut(s) 664
AloI GAACNNNNNNTCC 2 cut(s) 800, 832
AluBI AGCT 4 cut(s) 209, 317, 448, 558
AluI AGCT 4 cut(s) 209, 317, 448, 558
AlwI GGATC 3 cut(s) 89, 217, 230
AoxI GGCC 1 cut(s) 662
ApeKI GCWGC 1 cut(s) 503
ApoI RAATTY 2 cut(s) 256, 331
Asp700I GAANNNNTTC 1 cut(s) 897
AspLEI GCGC 3 cut(s) 74, 76, 603
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 2 cut(s) 479, 557
BalI TGGCCA 1 cut(s) 664
BamHI GGATCC 1 cut(s) 222
BanI GGYRCC 1 cut(s) 684
BarI GAAGNNNNNNTAC 2 cut(s) 835, 867
BbsI GAAGAC 1 cut(s) 339
BbvI GCAGC 1 cut(s) 490
BccI CCATC 2 cut(s) 482, 640
BciT130I CCWGG 1 cut(s) 666
BcnI CCSGG 1 cut(s) 185
BfaI CTAG 2 cut(s) 608, 867
BfmI CTRYAG 1 cut(s) 318
BisI GCNGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 505
Bme1390I CCNGG 2 cut(s) 185, 666
BmiI GGNNCC 2 cut(s) 224, 686
BmrFI CCNGG 2 cut(s) 185, 666
BmsI GCATC 2 cut(s) 490, 866
BpiI GAAGAC 1 cut(s) 339
BpuMI CCSGG 1 cut(s) 185
BsaJI CCNNGG 4 cut(s) 281, 462, 659, 665
BsaWI WCCGGW 1 cut(s) 483
BsaXI ACNNNNNCTCC 2 cut(s) 235, 265
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 283, 395, 665
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 1 cut(s) 20
Bse3DI GCAATG 1 cut(s) 59
BseBI CCWGG 1 cut(s) 666
BseDI CCNNGG 4 cut(s) 281, 462, 659, 665
BseGI GGATG 3 cut(s) 632, 814, 857
BseLI CCNNNNNNNGG 4 cut(s) 158, 283, 395, 665
BseMI GCAATG 1 cut(s) 59
BseNI ACTGG 1 cut(s) 20
BsePI GCGCGC 1 cut(s) 72
BseRI GAGGAG 1 cut(s) 784
BseXI GCAGC 1 cut(s) 490
Bsh1236I CGCG 3 cut(s) 74, 601, 603
BshFI GGCC 1 cut(s) 664
BshNI GGYRCC 1 cut(s) 684
BsiSI CCGG 4 cut(s) 159, 185, 198, 484
BslI CCNNNNNNNGG 4 cut(s) 158, 283, 395, 665
BsnI GGCC 1 cut(s) 664
Bsp143I GATC 4 cut(s) 36, 94, 222, 564
BspACI CCGC 3 cut(s) 64, 506, 603
BspANI GGCC 1 cut(s) 664
BspFNI CGCG 3 cut(s) 74, 601, 603
BspLI GGNNCC 2 cut(s) 224, 686
BspPI GGATC 3 cut(s) 89, 217, 230
BspT107I GGYRCC 1 cut(s) 684
BsrDI GCAATG 1 cut(s) 59
BsrFI RCCGGY 1 cut(s) 158
BsrI ACTGG 1 cut(s) 20
BssAI RCCGGY 1 cut(s) 158
BssECI CCNNGG 4 cut(s) 281, 462, 659, 665
BssHII GCGCGC 1 cut(s) 72
BssMI GATC 4 cut(s) 36, 94, 222, 564
BssT1I CCWWGG 1 cut(s) 281
Bst2UI CCWGG 1 cut(s) 666
Bst4CI ACNGT 3 cut(s) 660, 689, 696
BstC8I GCNNGC 3 cut(s) 74, 78, 164
BstDEI CTNAG 1 cut(s) 143
BstDSI CCRYGG 1 cut(s) 659
BstEII GGTNACC 1 cut(s) 467
BstF5I GGATG 3 cut(s) 632, 814, 857
BstFNI CGCG 3 cut(s) 74, 601, 603
BstHHI GCGC 3 cut(s) 74, 76, 603
BstKTI GATC 4 cut(s) 39, 97, 225, 567
BstMBI GATC 4 cut(s) 36, 94, 222, 564
BstMWI GCNNNNNNNGC 1 cut(s) 600
BstNI CCWGG 1 cut(s) 666
BstPI GGTNACC 1 cut(s) 467
BstSCI CCNGG 2 cut(s) 183, 664
BstSFI CTRYAG 1 cut(s) 318
BstUI CGCG 3 cut(s) 74, 601, 603
BstV1I GCAGC 1 cut(s) 490
BstV2I GAAGAC 1 cut(s) 339
BstX2I RGATCY 1 cut(s) 222
BstXI CCANNNNNNTGG 1 cut(s) 660
BstYI RGATCY 1 cut(s) 222
BsuRI GGCC 1 cut(s) 664
BtgI CCRYGG 1 cut(s) 659
BtsCI GGATG 3 cut(s) 632, 814, 857
BtsIMutI CAGTG 1 cut(s) 625
Cac8I GCNNGC 3 cut(s) 74, 78, 164
CfoI GCGC 3 cut(s) 74, 76, 603
Cfr10I RCCGGY 1 cut(s) 158
CviAII CATG 6 cut(s) 69, 202, 403, 574, 862, 890
DdeI CTNAG 1 cut(s) 143
DpnI GATC 4 cut(s) 38, 96, 224, 566
DpnII GATC 4 cut(s) 36, 94, 222, 564
EaeI YGGCCR 1 cut(s) 662
Eco130I CCWWGG 1 cut(s) 281
Eco91I GGTNACC 1 cut(s) 467
EcoO65I GGTNACC 1 cut(s) 467
EcoRII CCWGG 1 cut(s) 664
EcoT14I CCWWGG 1 cut(s) 281
ErhI CCWWGG 1 cut(s) 281
FaeI CATG 6 cut(s) 72, 205, 406, 577, 865, 893
FatI CATG 6 cut(s) 68, 201, 402, 573, 861, 889
Fnu4HI GCNGC 1 cut(s) 504
FokI GGATG 3 cut(s) 619, 821, 844
Fsp4HI GCNGC 1 cut(s) 504
FspBI CTAG 2 cut(s) 608, 867
GlaI GCGC 3 cut(s) 73, 75, 602
GluI GCNGC 1 cut(s) 504
HaeIII GGCC 1 cut(s) 664
HapII CCGG 4 cut(s) 159, 185, 198, 484
HhaI GCGC 3 cut(s) 74, 76, 603
Hin1II CATG 6 cut(s) 72, 205, 406, 577, 865, 893
Hin6I GCGC 3 cut(s) 72, 74, 601
HinP1I GCGC 3 cut(s) 72, 74, 601
HindIII AAGCTT 1 cut(s) 207
HinfI GANTC 2 cut(s) 399, 413
HpaII CCGG 4 cut(s) 159, 185, 198, 484
HphI GGTGA 2 cut(s) 479, 557
Hpy166II GTNNAC 1 cut(s) 692
Hpy188I TCNGA 1 cut(s) 802
Hpy8I GTNNAC 1 cut(s) 692
HpyAV CCTTC 4 cut(s) 303, 309, 503, 861
HpyCH4III ACNGT 3 cut(s) 660, 689, 696
HpyCH4V TGCA 8 cut(s) 21, 137, 233, 254, 425, 594, 763, 857
HpyF10VI GCNNNNNNNGC 1 cut(s) 600
HpyF3I CTNAG 1 cut(s) 143
Hsp92II CATG 6 cut(s) 72, 205, 406, 577, 865, 893
HspAI GCGC 3 cut(s) 72, 74, 601
Kzo9I GATC 4 cut(s) 36, 94, 222, 564
LmnI GCTCC 2 cut(s) 391, 555
Lsp1109I GCAGC 1 cut(s) 490
LweI GCATC 2 cut(s) 490, 866
MaeI CTAG 2 cut(s) 608, 867
MaeIII GTNAC 4 cut(s) 146, 467, 520, 545
MalI GATC 4 cut(s) 38, 96, 224, 566
MboI GATC 4 cut(s) 36, 94, 222, 564
MboII GAAGA 3 cut(s) 339, 685, 905
MfeI CAATTG 2 cut(s) 340, 432
MflI RGATCY 1 cut(s) 222
MlsI TGGCCA 1 cut(s) 664
MluCI AATT 9 cut(s) 112, 190, 256, 331, 340, 370, 432, 539, 708
MluNI TGGCCA 1 cut(s) 664
MmeI TCCRAC 1 cut(s) 376
MnlI CCTC 9 cut(s) 91, 128, 162, 242, 457, 501, 675, 762, 765
Mox20I TGGCCA 1 cut(s) 664
MroXI GAANNNNTTC 1 cut(s) 897
MscI TGGCCA 1 cut(s) 664
MseI TTAA 1 cut(s) 780
MslI CAYNNNNRTG 5 cut(s) 498, 529, 572, 618, 894
Msp20I TGGCCA 1 cut(s) 664
MspI CCGG 4 cut(s) 159, 185, 198, 484
MspR9I CCNGG 2 cut(s) 185, 666
MunI CAATTG 2 cut(s) 340, 432
MvaI CCWGG 1 cut(s) 666
MvnI CGCG 3 cut(s) 74, 601, 603
MwoI GCNNNNNNNGC 1 cut(s) 600
NciI CCSGG 1 cut(s) 185
NdeII GATC 4 cut(s) 36, 94, 222, 564
NlaIII CATG 6 cut(s) 72, 205, 406, 577, 865, 893
NlaIV GGNNCC 2 cut(s) 224, 686
NmuCI GTSAC 3 cut(s) 467, 520, 545
PauI GCGCGC 1 cut(s) 72
PdmI GAANNNNTTC 1 cut(s) 897
PfeI GAWTC 2 cut(s) 399, 413
PkrI GCNGC 1 cut(s) 505
Psp6I CCWGG 1 cut(s) 664
PspEI GGTNACC 1 cut(s) 467
PspGI CCWGG 1 cut(s) 664
PspN4I GGNNCC 2 cut(s) 224, 686
PsuI RGATCY 1 cut(s) 222
PteI GCGCGC 1 cut(s) 72
RseI CAYNNNNRTG 5 cut(s) 498, 529, 572, 618, 894
SaqAI TTAA 1 cut(s) 780
SatI GCNGC 1 cut(s) 504
Sau3AI GATC 4 cut(s) 36, 94, 222, 564
ScrFI CCNGG 2 cut(s) 185, 666
SetI ASST 8 cut(s) 211, 253, 301, 314, 319, 450, 560, 885
SfaNI GCATC 2 cut(s) 490, 866
SfcI CTRYAG 1 cut(s) 318
SmiMI CAYNNNNRTG 5 cut(s) 498, 529, 572, 618, 894
Sse9I AATT 9 cut(s) 112, 190, 256, 331, 340, 370, 432, 539, 708
SsiI CCGC 3 cut(s) 64, 506, 603
SspMI CTAG 2 cut(s) 608, 867
StyD4I CCNGG 2 cut(s) 183, 664
StyI CCWWGG 1 cut(s) 281
TaaI ACNGT 3 cut(s) 660, 689, 696
TaqI TCGA 2 cut(s) 83, 819
TasI AATT 9 cut(s) 112, 190, 256, 331, 340, 370, 432, 539, 708
TfiI GAWTC 2 cut(s) 399, 413
Tru1I TTAA 1 cut(s) 780
Tru9I TTAA 1 cut(s) 780
TscAI CASTG 1 cut(s) 625
TseFI GTSAC 3 cut(s) 467, 520, 545
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 3 cut(s) 467, 520, 545
TspDTI ATGAA 4 cut(s) 201, 255, 391, 906
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 1 cut(s) 625
XapI RAATTY 2 cut(s) 256, 331
XmnI GAANNNNTTC 1 cut(s) 897
XspI CTAG 2 cut(s) 608, 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.