Prupe.2G182600_v2.0.a1

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0015878
Physical Location & Seq
Forward (+)
22505153 .. 22506793
1641 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G182600.1

Sequence Viewer

Length: 924 bp
ATGGAGTTCTTCAAAAGCTGGCACATCCTCTGGCTGCTCTTTTCTCTGTCATTTTCATCATCATCATCATCTTTTGTGCAAGCCTTGTATGGCTATGACCCTGAGTCCTTGAGCACTTTTTTCCATGATTATGCAAACACAAGTCTAAGGAACCCTCATACTGGCACGCTATACAATATTTCTCTCCCTGCTAATTTCTCTGGCATGGAAGCTTCTTTTGTTAGGGTCCTTAGTGCAAAGTTTTGGAGTAGAGGAGCAAATTTCAGTTCATTTCAAATACCACCAAGGGTTATTCCAATGCCTTACCGAAGAAGGCTAGCTATAGTGTTTGAGAATTTAGGCAATTGGTCTTCAAGTTACTACCAGATGTCCAATTACACATTGGTTGCTCCTGTTGTTGGCTTCATGGCTTATGATTCTCCAAATGCAACTCCAATAGGAAATCAGAAGCTCAATTTCACTACTCAGGGTGACCCCATTACAATCCGGTTTCCGCATATTGATGATGTGCAAGGGAAAAATGTGACACCAAAATGTGTCCAATTTGGTGCTGCTGGGAGCTTTGAGATCAAGAACATGACCAAGGAAAATGAGTGCATTACACATGGTTTAGGCCATTTTTCCATTGTCGTTCCATCTCCGCCTAGGCCAGCGCCAACACCAACGCCAACGCCAGAGAAGAAAAAGAGGCATCGGAAAGGGTTGGGGAAAGGGTTTGTAGTTGGAATTGTGTTTGGGTTGGTTTTACTGGGATTGGTAATGATAGCCATATTCAAGTTATGGTGGAGGAAGAAACTTAAAGCTATGGAGAAGCAGTCTGAAAAGGATGTGGCTTTTGATACATTTTGGGTTGGGAGAAGTAAAATGCCTTCTGCATCAATGACTAGAACCCAACCATATCTTGAACATGAATATGTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

308

Amino Acids

34.69

Weight (kDa)

9.72

Isoelectric Point (pI)

44.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015878)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01140
fragaria_vesca FvH4_7g15770
malus_domestica MD01G1074500.v1.1 MD07G1143400.v1.1
prunus_persica Prupe.2G182600_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358561
rosa_laevigata RLG00000027946
rosa_multiflora Rmu_sc0001609.1_g000011
rosa_roxburghii Rroxscaffold_4G00297810
rosa_rugosa Rorug01G0262600
rosa_samantha Rh1AG277400 Rh1BG243700 Rh1CG260800 Rh1DG272000
rosa_wichuraiana Rw1G024640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 494, 641
AcsI RAATTY 2 cut(s) 259, 334
AfiI CCNNNNNNNGG 2 cut(s) 161, 398
AgsI TTSAA 5 cut(s) 13, 275, 354, 775, 905
AhdI GACNNNNNGTC 1 cut(s) 103
AluBI AGCT 6 cut(s) 18, 212, 320, 451, 561, 803
AluI AGCT 6 cut(s) 18, 212, 320, 451, 561, 803
Alw21I GWGCWC 1 cut(s) 116
AoxI GGCC 2 cut(s) 613, 647
ApeKI GCWGC 2 cut(s) 34, 551
ApoI RAATTY 2 cut(s) 259, 334
Asp700I GAANNNNTTC 1 cut(s) 915
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 1 cut(s) 655
AspS9I GGNCC 1 cut(s) 226
AsuHPI GGTGA 1 cut(s) 482
AsuNHI GCTAGC 1 cut(s) 316
AvaII GGWCC 1 cut(s) 226
AvrII CCTAGG 1 cut(s) 644
BarI GAAGNNNNNNTAC 2 cut(s) 853, 885
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 1 cut(s) 116
BbvI GCAGC 2 cut(s) 21, 538
BccI CCATC 1 cut(s) 643
BfaI CTAG 3 cut(s) 317, 645, 885
BfmI CTRYAG 1 cut(s) 321
BfoI RGCGCY 1 cut(s) 656
BisI GCNGC 2 cut(s) 35, 552
BlnI CCTAGG 1 cut(s) 644
BlsI GCNGC 2 cut(s) 36, 553
Bme18I GGWCC 1 cut(s) 226
BmeRI GACNNNNNGTC 1 cut(s) 103
BmgT120I GGNCC 1 cut(s) 226
BmiI GGNNCC 2 cut(s) 152, 227
BmrI ACTGGG 1 cut(s) 758
BmsI GCATC 2 cut(s) 700, 884
BmtI GCTAGC 1 cut(s) 320
BmuI ACTGGG 1 cut(s) 758
BpiI GAAGAC 1 cut(s) 342
BpuEI CTTGAG 1 cut(s) 130
BsaJI CCNNGG 3 cut(s) 284, 582, 644
BsaWI WCCGGW 1 cut(s) 486
BsaXI ACNNNNNCTCC 2 cut(s) 800, 830
Bsc4I CCNNNNNNNGG 2 cut(s) 161, 398
Bse1I ACTGG 2 cut(s) 166, 753
BseDI CCNNGG 3 cut(s) 284, 582, 644
BseGI GGATG 2 cut(s) 24, 832
BseLI CCNNNNNNNGG 2 cut(s) 161, 398
BseMII CTCAG 2 cut(s) 93, 479
BseNI ACTGG 2 cut(s) 166, 753
BseRI GAGGAG 1 cut(s) 267
BseXI GCAGC 2 cut(s) 21, 538
BseYI CCCAGC 1 cut(s) 554
BshFI GGCC 2 cut(s) 615, 649
BsiHKAI GWGCWC 1 cut(s) 116
BsiSI CCGG 1 cut(s) 487
BslI CCNNNNNNNGG 2 cut(s) 161, 398
BsnI GGCC 2 cut(s) 615, 649
Bsp1286I GDGCHC 1 cut(s) 116
Bsp143I GATC 1 cut(s) 567
BspACI CCGC 2 cut(s) 494, 641
BspANI GGCC 2 cut(s) 615, 649
BspCNI CTCAG 2 cut(s) 94, 478
BspLI GGNNCC 2 cut(s) 152, 227
BspOI GCTAGC 1 cut(s) 320
BsrI ACTGG 2 cut(s) 166, 753
BssECI CCNNGG 3 cut(s) 284, 582, 644
BssMI GATC 1 cut(s) 567
BssT1I CCWWGG 3 cut(s) 284, 582, 644
BstC8I GCNNGC 5 cut(s) 20, 81, 167, 318, 651
BstDEI CTNAG 4 cut(s) 102, 146, 230, 465
BstEII GGTNACC 1 cut(s) 470
BstF5I GGATG 2 cut(s) 24, 832
BstH2I RGCGCY 1 cut(s) 656
BstHHI GCGC 1 cut(s) 655
BstKTI GATC 1 cut(s) 570
BstMBI GATC 1 cut(s) 567
BstPI GGTNACC 1 cut(s) 470
BstSFI CTRYAG 1 cut(s) 321
BstV1I GCAGC 2 cut(s) 21, 538
BstV2I GAAGAC 1 cut(s) 342
BsuRI GGCC 2 cut(s) 615, 649
BtsCI GGATG 2 cut(s) 24, 832
Cac8I GCNNGC 5 cut(s) 20, 81, 167, 318, 651
CfoI GCGC 1 cut(s) 655
Cfr13I GGNCC 1 cut(s) 226
CviAII CATG 6 cut(s) 125, 205, 406, 577, 605, 908
DdeI CTNAG 4 cut(s) 102, 146, 230, 465
DpnI GATC 1 cut(s) 569
DpnII GATC 1 cut(s) 567
DriI GACNNNNNGTC 1 cut(s) 103
Eam1105I GACNNNNNGTC 1 cut(s) 103
EciI GGCGGA 1 cut(s) 630
Eco130I CCWWGG 3 cut(s) 284, 582, 644
Eco47I GGWCC 1 cut(s) 226
Eco91I GGTNACC 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 226
EcoO65I GGTNACC 1 cut(s) 470
EcoT14I CCWWGG 3 cut(s) 284, 582, 644
ErhI CCWWGG 3 cut(s) 284, 582, 644
FaeI CATG 6 cut(s) 128, 208, 409, 580, 608, 911
FatI CATG 6 cut(s) 124, 204, 405, 576, 604, 907
Fnu4HI GCNGC 2 cut(s) 35, 552
FokI GGATG 2 cut(s) 11, 839
Fsp4HI GCNGC 2 cut(s) 35, 552
FspBI CTAG 3 cut(s) 317, 645, 885
GlaI GCGC 1 cut(s) 654
GluI GCNGC 2 cut(s) 35, 552
GsaI CCCAGC 1 cut(s) 558
HaeII RGCGCY 1 cut(s) 656
HaeIII GGCC 2 cut(s) 615, 649
HapII CCGG 1 cut(s) 487
HhaI GCGC 1 cut(s) 655
Hin1II CATG 6 cut(s) 128, 208, 409, 580, 608, 911
Hin6I GCGC 1 cut(s) 653
HinP1I GCGC 1 cut(s) 653
HindIII AAGCTT 1 cut(s) 210
HinfI GANTC 2 cut(s) 104, 416
HpaII CCGG 1 cut(s) 487
HphI GGTGA 1 cut(s) 482
Hpy188I TCNGA 3 cut(s) 447, 696, 820
Hpy188III TCNNGA 2 cut(s) 571, 902
HpyAV CCTTC 2 cut(s) 306, 879
HpyCH4V TGCA 7 cut(s) 79, 134, 236, 428, 511, 597, 875
HpyF3I CTNAG 4 cut(s) 102, 146, 230, 465
Hsp92II CATG 6 cut(s) 128, 208, 409, 580, 608, 911
HspAI GCGC 1 cut(s) 653
Kzo9I GATC 1 cut(s) 567
LmnI GCTCC 3 cut(s) 254, 394, 558
Lsp1109I GCAGC 2 cut(s) 21, 538
LweI GCATC 2 cut(s) 700, 884
MaeI CTAG 3 cut(s) 317, 645, 885
MaeIII GTNAC 3 cut(s) 356, 470, 523
MalI GATC 1 cut(s) 569
MboI GATC 1 cut(s) 567
MboII GAAGA 4 cut(s) 321, 342, 691, 802
MfeI CAATTG 1 cut(s) 343
MhlI GDGCHC 1 cut(s) 116
MluCI AATT 8 cut(s) 193, 259, 334, 343, 373, 454, 542, 726
MlyI GAGTC 1 cut(s) 113
MmeI TCCRAC 1 cut(s) 703
MnlI CCTC 5 cut(s) 38, 165, 245, 681, 780
MroXI GAANNNNTTC 1 cut(s) 915
MseI TTAA 1 cut(s) 798
MslI CAYNNNNRTG 4 cut(s) 129, 501, 532, 912
MspI CCGG 1 cut(s) 487
MunI CAATTG 1 cut(s) 343
NdeII GATC 1 cut(s) 567
NheI GCTAGC 1 cut(s) 316
NlaIII CATG 6 cut(s) 128, 208, 409, 580, 608, 911
NlaIV GGNNCC 2 cut(s) 152, 227
NmuCI GTSAC 2 cut(s) 470, 523
PdmI GAANNNNTTC 1 cut(s) 915
PfeI GAWTC 1 cut(s) 416
PkrI GCNGC 2 cut(s) 36, 553
PleI GAGTC 1 cut(s) 112
PpsI GAGTC 1 cut(s) 112
PpuMI RGGWCCY 1 cut(s) 226
Psp5II RGGWCCY 1 cut(s) 226
PspEI GGTNACC 1 cut(s) 470
PspFI CCCAGC 1 cut(s) 554
PspN4I GGNNCC 2 cut(s) 152, 227
PspPI GGNCC 1 cut(s) 226
PspPPI RGGWCCY 1 cut(s) 226
RseI CAYNNNNRTG 4 cut(s) 129, 501, 532, 912
SaqAI TTAA 1 cut(s) 798
SatI GCNGC 2 cut(s) 35, 552
Sau3AI GATC 1 cut(s) 567
Sau96I GGNCC 1 cut(s) 226
SchI GAGTC 1 cut(s) 113
SduI GDGCHC 1 cut(s) 116
SetI ASST 6 cut(s) 20, 214, 322, 453, 563, 805
SfaNI GCATC 2 cut(s) 700, 884
SfcI CTRYAG 1 cut(s) 321
SinI GGWCC 1 cut(s) 226
SmiMI CAYNNNNRTG 4 cut(s) 129, 501, 532, 912
SmlI CTYRAG 1 cut(s) 109
SmoI CTYRAG 1 cut(s) 109
Sse9I AATT 8 cut(s) 193, 259, 334, 343, 373, 454, 542, 726
SsiI CCGC 2 cut(s) 494, 641
SspI AATATT 1 cut(s) 178
SspMI CTAG 3 cut(s) 317, 645, 885
StyI CCWWGG 3 cut(s) 284, 582, 644
TasI AATT 8 cut(s) 193, 259, 334, 343, 373, 454, 542, 726
TfiI GAWTC 1 cut(s) 416
Tru1I TTAA 1 cut(s) 798
Tru9I TTAA 1 cut(s) 798
TseFI GTSAC 2 cut(s) 470, 523
TseI GCWGC 2 cut(s) 34, 551
Tsp45I GTSAC 2 cut(s) 470, 523
TspDTI ATGAA 4 cut(s) 45, 258, 394, 924
VpaK11BI GGWCC 1 cut(s) 226
XapI RAATTY 2 cut(s) 259, 334
XcmI CCANNNNNNNNNTGG 1 cut(s) 379
XmaJI CCTAGG 1 cut(s) 644
XmnI GAANNNNTTC 1 cut(s) 915
XspI CTAG 3 cut(s) 317, 645, 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.