MD07G1143400.v1.1

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0015878
Physical Location & Seq
Forward (+)
20900692 .. 20901594
903 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1143400.v1.1.491

Sequence Viewer

Length: 903 bp
ATGGAGTTCTTCAACTGGTACTTAATCTGGCTGATGATCTTATTTTCTCTGTCATTGCCATCACCGTCATTCATGCAAGCCTCCAATGGCTATGATCCTTTGTCCTTGACAAATTTTCTCCATGATTATGCAAATGCAAGCCTAAGGAACCCGCACACCGGCACGCTGTACAATATTTCTCTCCCGGCTAATTTTTCTGGCATGGAAGCTTCATTTGTTAGGATCCTTAGTGCAAAGTTTTGGAGTAGAGGCGCAAACTTCAGTTCATTTTATATCCCACCGAAGGTTATACCAATACCTTCTAGCAGAAGGTTAGCTATAGTGTTTGAAAATTTAGGCAATTGGTCTTCACTTTACTACAAAATATCAAATTACACATTGGTTGCTCCTGTTGTTGGATTCATGGCTTATGATTCTCCAAATGGAACTGTAATTGGCAACCAGAAGCTCACGTTCACTGCCGACGGTGACCCCATCACAATCCGGTTTCCTCACATTGATGCTGCGCAAGGGGAAAATATGACACGAAAATGTGTCCAATTTGGTGATTGGGGGACCTTTGAGATCACGAACATGACTAGTGAAAATGAGTGCATTACACGTGGTATAGGGCATTTTAGCATTGTTGTTGCATCCCCGCCAGCACCAACACCAGCACCGGCGCCAGTGAAGAAAAAGAGGAACCGGAAATGGTTTGTGGTTGGAATTGTGTTTGGGTTAGCATTTTTAGGGTTGGTAATGATAGTCACATTCAAGTTACTGACGAGGAGGAAACTTAAATCTATGGAGAAGCAGTCCGAAAAAGATGTGGCGTTTGATACATTTTGGGTTGGGAGAAGTAAAATGCCTTCTGCATCCATGACTAGAACTCAACCCTACCTTGAACATGAATATGTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

301

Amino Acids

33.8

Weight (kDa)

9.52

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1191 PF06697 35 - 210 4.9e-61 Protein of unknown function (DUF1191)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015878)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01140
fragaria_vesca FvH4_7g15770
malus_domestica MD01G1074500.v1.1 MD07G1143400.v1.1
prunus_persica Prupe.2G182600_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358561
rosa_laevigata RLG00000027946
rosa_multiflora Rmu_sc0001609.1_g000011
rosa_roxburghii Rroxscaffold_4G00297810
rosa_rugosa Rorug01G0262600
rosa_samantha Rh1AG277400 Rh1BG243700 Rh1CG260800 Rh1DG272000
rosa_wichuraiana Rw1G024640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 507
AccB1I GGYRCC 1 cut(s) 661
AciI CCGC 2 cut(s) 152, 638
AclWI GGATC 3 cut(s) 89, 217, 230
AcsI RAATTY 2 cut(s) 112, 331
AcuI CTGAAG 1 cut(s) 244
AcvI CACGTG 1 cut(s) 602
AcyI GRCGYC 1 cut(s) 662
AfaI GTAC 2 cut(s) 20, 170
AfiI CCNNNNNNNGG 3 cut(s) 158, 283, 395
AflIII ACRYGT 1 cut(s) 599
AgsI TTSAA 4 cut(s) 13, 329, 754, 884
AhlI ACTAGT 1 cut(s) 578
AluBI AGCT 3 cut(s) 209, 317, 448
AluI AGCT 3 cut(s) 209, 317, 448
AlwI GGATC 3 cut(s) 89, 217, 230
ApeKI GCWGC 1 cut(s) 503
ApoI RAATTY 2 cut(s) 112, 331
Asp700I GAANNNNTTC 1 cut(s) 894
AspLEI GCGC 3 cut(s) 254, 508, 664
AspS9I GGNCC 1 cut(s) 555
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 3 cut(s) 54, 479, 557
AvaII GGWCC 1 cut(s) 555
AxyI CCTNAGG 1 cut(s) 143
BamHI GGATCC 1 cut(s) 222
BanI GGYRCC 1 cut(s) 661
BarI GAAGNNNNNNTAC 2 cut(s) 832, 864
BbrPI CACGTG 1 cut(s) 602
BbsI GAAGAC 1 cut(s) 339
BbvI GCAGC 1 cut(s) 490
BccI CCATC 2 cut(s) 67, 482
BcnI CCSGG 1 cut(s) 185
BcuI ACTAGT 1 cut(s) 578
BfaI CTAG 3 cut(s) 303, 579, 864
BfmI CTRYAG 1 cut(s) 318
BfoI RGCGCY 1 cut(s) 665
BisI GCNGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 505
Bme1390I CCNGG 1 cut(s) 185
Bme18I GGWCC 1 cut(s) 555
BmgT120I GGNCC 1 cut(s) 555
BmiI GGNNCC 5 cut(s) 149, 224, 556, 663, 683
BmrFI CCNGG 1 cut(s) 185
BmsI GCATC 3 cut(s) 490, 641, 863
BpiI GAAGAC 1 cut(s) 339
BpuMI CCSGG 1 cut(s) 185
BsaAI YACGTR 1 cut(s) 602
BsaHI GRCGYC 1 cut(s) 662
BsaWI WCCGGW 2 cut(s) 483, 684
BsaXI ACNNNNNCTCC 2 cut(s) 779, 809
Bsc4I CCNNNNNNNGG 3 cut(s) 158, 283, 395
Bse118I RCCGGY 2 cut(s) 158, 658
Bse1I ACTGG 2 cut(s) 20, 665
Bse21I CCTNAGG 1 cut(s) 143
Bse3DI GCAATG 1 cut(s) 53
BseGI GGATG 2 cut(s) 632, 854
BseLI CCNNNNNNNGG 3 cut(s) 158, 283, 395
BseMI GCAATG 1 cut(s) 53
BseNI ACTGG 2 cut(s) 20, 665
BseRI GAGGAG 1 cut(s) 781
BseXI GCAGC 1 cut(s) 490
BshNI GGYRCC 1 cut(s) 661
BsiSI CCGG 5 cut(s) 159, 185, 484, 659, 685
BslFI GGGAC 1 cut(s) 568
BslI CCNNNNNNNGG 3 cut(s) 158, 283, 395
BsmFI GGGAC 1 cut(s) 568
Bsp1407I TGTACA 1 cut(s) 168
Bsp143I GATC 4 cut(s) 36, 94, 222, 564
BspACI CCGC 2 cut(s) 152, 638
BspLI GGNNCC 5 cut(s) 149, 224, 556, 663, 683
BspPI GGATC 3 cut(s) 89, 217, 230
BspT107I GGYRCC 1 cut(s) 661
BsrDI GCAATG 1 cut(s) 53
BsrFI RCCGGY 2 cut(s) 158, 658
BsrGI TGTACA 1 cut(s) 168
BsrI ACTGG 2 cut(s) 20, 665
BssAI RCCGGY 2 cut(s) 158, 658
BssMI GATC 4 cut(s) 36, 94, 222, 564
BssNI GRCGYC 1 cut(s) 662
Bst4CI ACNGT 3 cut(s) 66, 430, 467
BstACI GRCGYC 1 cut(s) 662
BstAUI TGTACA 1 cut(s) 168
BstBAI YACGTR 1 cut(s) 602
BstC8I GCNNGC 4 cut(s) 78, 139, 164, 642
BstDEI CTNAG 2 cut(s) 143, 227
BstEII GGTNACC 1 cut(s) 467
BstF5I GGATG 2 cut(s) 632, 854
BstH2I RGCGCY 1 cut(s) 665
BstHHI GCGC 3 cut(s) 254, 508, 664
BstKTI GATC 4 cut(s) 39, 97, 225, 567
BstMBI GATC 4 cut(s) 36, 94, 222, 564
BstPI GGTNACC 1 cut(s) 467
BstSCI CCNGG 1 cut(s) 183
BstSFI CTRYAG 1 cut(s) 318
BstV1I GCAGC 1 cut(s) 490
BstV2I GAAGAC 1 cut(s) 339
BstX2I RGATCY 1 cut(s) 222
BstYI RGATCY 1 cut(s) 222
Bsu36I CCTNAGG 1 cut(s) 143
BtsCI GGATG 2 cut(s) 632, 854
BtsI GCAGTG 1 cut(s) 456
BtsIMutI CAGTG 2 cut(s) 456, 672
Cac8I GCNNGC 4 cut(s) 78, 139, 164, 642
CfoI GCGC 3 cut(s) 254, 508, 664
Cfr10I RCCGGY 2 cut(s) 158, 658
Cfr13I GGNCC 1 cut(s) 555
Csp6I GTAC 2 cut(s) 19, 169
CviAII CATG 7 cut(s) 73, 122, 202, 403, 574, 859, 887
CviJI RGCY 9 cut(s) 31, 80, 90, 141, 188, 209, 317, 407, 448
CviKI_1 RGCY 9 cut(s) 31, 80, 90, 141, 188, 209, 317, 407, 448
CviQI GTAC 2 cut(s) 19, 169
DdeI CTNAG 2 cut(s) 143, 227
DinI GGCGCC 1 cut(s) 663
DpnI GATC 4 cut(s) 38, 96, 224, 566
DpnII GATC 4 cut(s) 36, 94, 222, 564
Eco47I GGWCC 1 cut(s) 555
Eco57I CTGAAG 1 cut(s) 244
Eco72I CACGTG 1 cut(s) 602
Eco81I CCTNAGG 1 cut(s) 143
Eco91I GGTNACC 1 cut(s) 467
EcoO109I RGGNCCY 1 cut(s) 555
EcoO65I GGTNACC 1 cut(s) 467
EgeI GGCGCC 1 cut(s) 663
EheI GGCGCC 1 cut(s) 663
FaeI CATG 7 cut(s) 76, 125, 205, 406, 577, 862, 890
FaqI GGGAC 1 cut(s) 568
FatI CATG 7 cut(s) 72, 121, 201, 402, 573, 858, 886
FauI CCCGC 2 cut(s) 159, 645
Fnu4HI GCNGC 1 cut(s) 504
FokI GGATG 2 cut(s) 619, 841
Fsp4HI GCNGC 1 cut(s) 504
FspBI CTAG 3 cut(s) 303, 579, 864
FspI TGCGCA 1 cut(s) 507
GlaI GCGC 3 cut(s) 253, 507, 663
GluI GCNGC 1 cut(s) 504
HaeII RGCGCY 1 cut(s) 665
HapII CCGG 5 cut(s) 159, 185, 484, 659, 685
HhaI GCGC 3 cut(s) 254, 508, 664
Hin1I GRCGYC 1 cut(s) 662
Hin1II CATG 7 cut(s) 76, 125, 205, 406, 577, 862, 890
Hin6I GCGC 3 cut(s) 252, 506, 662
HinP1I GCGC 3 cut(s) 252, 506, 662
HindIII AAGCTT 1 cut(s) 207
HinfI GANTC 2 cut(s) 399, 413
HpaII CCGG 5 cut(s) 159, 185, 484, 659, 685
HphI GGTGA 3 cut(s) 54, 479, 557
Hpy166II GTNNAC 1 cut(s) 456
Hpy188I TCNGA 1 cut(s) 799
Hpy188III TCNNGA 1 cut(s) 568
Hpy8I GTNNAC 1 cut(s) 456
Hpy99I CGWCG 1 cut(s) 467
HpyAV CCTTC 4 cut(s) 277, 303, 309, 858
HpyCH4III ACNGT 3 cut(s) 66, 430, 467
HpyCH4IV ACGT 2 cut(s) 452, 601
HpyCH4V TGCA 7 cut(s) 76, 131, 137, 233, 594, 632, 854
HpyF3I CTNAG 2 cut(s) 143, 227
HpySE526I ACGT 2 cut(s) 452, 601
Hsp92I GRCGYC 1 cut(s) 662
Hsp92II CATG 7 cut(s) 76, 125, 205, 406, 577, 862, 890
HspAI GCGC 3 cut(s) 252, 506, 662
KasI GGCGCC 1 cut(s) 661
Kzo9I GATC 4 cut(s) 36, 94, 222, 564
LmnI GCTCC 1 cut(s) 391
Lsp1109I GCAGC 1 cut(s) 490
LweI GCATC 3 cut(s) 490, 641, 863
MaeI CTAG 3 cut(s) 303, 579, 864
MaeII ACGT 2 cut(s) 452, 601
MaeIII GTNAC 3 cut(s) 467, 745, 756
MalI GATC 4 cut(s) 38, 96, 224, 566
MboI GATC 4 cut(s) 36, 94, 222, 564
MboII GAAGA 2 cut(s) 339, 682
MfeI CAATTG 1 cut(s) 340
MflI RGATCY 1 cut(s) 222
MluCI AATT 8 cut(s) 112, 190, 331, 340, 370, 432, 539, 705
Mly113I GGCGCC 1 cut(s) 662
MmeI TCCRAC 2 cut(s) 376, 682
MnlI CCTC 6 cut(s) 91, 242, 501, 672, 759, 762
MroXI GAANNNNTTC 1 cut(s) 894
MseI TTAA 2 cut(s) 23, 777
MslI CAYNNNNRTG 5 cut(s) 126, 498, 529, 572, 891
MspI CCGG 5 cut(s) 159, 185, 484, 659, 685
MspR9I CCNGG 1 cut(s) 185
MunI CAATTG 1 cut(s) 340
NarI GGCGCC 1 cut(s) 662
NciI CCSGG 1 cut(s) 185
NdeII GATC 4 cut(s) 36, 94, 222, 564
NlaIII CATG 7 cut(s) 76, 125, 205, 406, 577, 862, 890
NlaIV GGNNCC 5 cut(s) 149, 224, 556, 663, 683
NmuCI GTSAC 2 cut(s) 467, 745
NsbI TGCGCA 1 cut(s) 507
PdmI GAANNNNTTC 1 cut(s) 894
PfeI GAWTC 2 cut(s) 399, 413
PkrI GCNGC 1 cut(s) 505
PluTI GGCGCC 1 cut(s) 665
PmaCI CACGTG 1 cut(s) 602
PmlI CACGTG 1 cut(s) 602
Ppu21I YACGTR 1 cut(s) 602
PpuMI RGGWCCY 1 cut(s) 555
Psp5II RGGWCCY 1 cut(s) 555
PspCI CACGTG 1 cut(s) 602
PspEI GGTNACC 1 cut(s) 467
PspN4I GGNNCC 5 cut(s) 149, 224, 556, 663, 683
PspPI GGNCC 1 cut(s) 555
PspPPI RGGWCCY 1 cut(s) 555
PsuI RGATCY 1 cut(s) 222
RsaI GTAC 2 cut(s) 20, 170
RsaNI GTAC 2 cut(s) 19, 169
RseI CAYNNNNRTG 5 cut(s) 126, 498, 529, 572, 891
SaqAI TTAA 2 cut(s) 23, 777
SatI GCNGC 1 cut(s) 504
Sau3AI GATC 4 cut(s) 36, 94, 222, 564
Sau96I GGNCC 1 cut(s) 555
ScrFI CCNGG 1 cut(s) 185
SfaNI GCATC 3 cut(s) 490, 641, 863
SfcI CTRYAG 1 cut(s) 318
SfoI GGCGCC 1 cut(s) 663
SgrAI CRCCGGYG 1 cut(s) 658
SinI GGWCC 1 cut(s) 555
SmiMI CAYNNNNRTG 5 cut(s) 126, 498, 529, 572, 891
SpeI ACTAGT 1 cut(s) 578
Sse9I AATT 8 cut(s) 112, 190, 331, 340, 370, 432, 539, 705
SsiI CCGC 2 cut(s) 152, 638
SspDI GGCGCC 1 cut(s) 661
SspI AATATT 1 cut(s) 175
SspMI CTAG 3 cut(s) 303, 579, 864
StyD4I CCNGG 1 cut(s) 183
TaaI ACNGT 3 cut(s) 66, 430, 467
TaiI ACGT 2 cut(s) 455, 604
TasI AATT 8 cut(s) 112, 190, 331, 340, 370, 432, 539, 705
TatI WGTACW 1 cut(s) 168
TfiI GAWTC 2 cut(s) 399, 413
Tru1I TTAA 2 cut(s) 23, 777
Tru9I TTAA 2 cut(s) 23, 777
TscAI CASTG 2 cut(s) 463, 672
TseFI GTSAC 2 cut(s) 467, 745
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 2 cut(s) 467, 745
TspDTI ATGAA 5 cut(s) 61, 201, 255, 391, 903
TspRI CASTG 2 cut(s) 463, 672
VpaK11BI GGWCC 1 cut(s) 555
XapI RAATTY 2 cut(s) 112, 331
XmnI GAANNNNTTC 1 cut(s) 894
XspI CTAG 3 cut(s) 303, 579, 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.