FvH4_7g16430

Possible catecholamine-binding domain present in a variety of eukaryotic proteins.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0013451
Physical Location & Seq
Reverse (-)
14079137 .. 14080837
1701 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g16430.t1

Sequence Viewer

Length: 1209 bp
ATGGCGAATCCAGGGACGTGGAGTATGGTTTTGAGGTTATGTGCCCTAATCCTTTTCTTGGAGGCCAAGGTTTTTGTTTTGGGTGGTGATGATAGTAATGTTCAGGGTGGTAATAGTATAGATGGATCTGGTGGAGTATCAGAGCTTTGTGTTAATGATCTTGCTAGTTTCATGCCACCACCATATGGTAATTCATCTGATATAGTATGCAAGCCTATTTGGAACACTTTTGTTTTGAGGTACACCCAAACTGATGATCATGTAATGAACATTATATTATCTGCTGTATACACCACTGGGTGGGTAGGAATGGGATTTTCCAGAGATGGATTGATGGTTGGTTCAAGTGCCATAGTGGGATGGGTTAATAGAAAAGGTCAAGCAAGAATTAAGCAATACTATTTGCAAGGTTCAAAGTCTTCACAAGTCATACCAGACAAAGGTGAATTGCCACTTACTGGTATTCCTGCTACTCTTGTGCTTCATGGCCCTAGGATTTACTTGGCATTCCAGTTGAAATTCCAAACTCAGCTTGCTCGGCAACCACTTATCTTGGCCGTTGGAAGCGGTTATCCCAAGCACAACAACCACTTACCAGTACACACCGATAAAACCACAATCAAGTTTGACTTCTCTGCAGGTTCTGCATCTGAGGCACATATTGATTTTAAGCAGATGAAGAAGAACCATGGAATATTAGCTATATTTGGATGGGGTCTAATCCTTCCTTTGGGGGCAATTGTCCCAAGATACTTCAAGCACAAGGACCCTTTGTGGTACTATCTTCATTCGATTATTCAATTTGTGGGATTTGTCATTGGACTTGCAGCAGTGGTACTTGGACAACAACTCTATGCTAAAATAGATGCCAACTTTCATACACATAGAGGAATTGGAATCTTTGTTCTTGTGCTTAGTATCCTTCAGATATTGGCATTTTTTCTAAGACCAAGCAAGGATGCCAAGATTAGGAAGTACTGGAACTGGTACCACCACTGGTTTGGAAGGCTTGCAGTCTTCTTCGCAGCTGTGAACATAGTACTGGGGATCAAAATTGGAGCTCCCGGAATTGAATGGAAGATTAGCTATGGATTTTTTCTTAGCATAATTCTTCTCGCTGTGATTGTTTTAGAAACTTTGGCAAGAATGAGGAGGACAGAAACTAAGGATACCATGCCTCCAAACTTCCAGATGAATCCGGTTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cytochrom_B561 DOMON

Protein Analysis

403

Amino Acids

44.73

Weight (kDa)

9.62

Isoelectric Point (pI)

27.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DOMON PF03351 79 - 147 6.3e-10 DOMON domain
Cytochrom_B561 PF03188 248 - 350 5.6e-06 Eukaryotic cytochrome b561
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013451)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61750 AT3G61750
fragaria_vesca FvH4_7g16430
malus_domestica MD01G1080600.v1.1 MD07G1149500.v1.1
prunus_persica Prupe.2G188200_v2.0.a1
pyrus_communis pycom01g10870 pycom07g14810
rosa_chinensis RchiOBHm_Chr1g0359441
rosa_laevigata RLG00000027869
rosa_multiflora Rmu_ssc0000358.1_g000010
rosa_roxburghii Rroxscaffold_4G00297000
rosa_rugosa Rorug01G0271400
rosa_samantha Rh1AG284700 Rh1BG250700 Rh1CG268800 Rh1DG279800
rosa_wichuraiana Rw1G025290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 629
Acc65I GGTACC 1 cut(s) 987
AccB1I GGYRCC 1 cut(s) 987
AccB7I CCANNNNNTGG 3 cut(s) 185, 300, 458
AccI GTMKAC 1 cut(s) 288
AciI CCGC 1 cut(s) 567
AclWI GGATC 2 cut(s) 133, 1055
AcoI YGGCCR 1 cut(s) 555
AcsI RAATTY 1 cut(s) 518
AcuI CTGAAG 1 cut(s) 908
AdeI CACNNNGTG 1 cut(s) 300
AfaI GTAC 7 cut(s) 242, 600, 779, 837, 977, 989, 1041
AfiI CCNNNNNNNGG 7 cut(s) 58, 185, 300, 440, 458, 730, 969
AgsI TTSAA 6 cut(s) 345, 414, 517, 757, 800, 1073
AjiI CACGTC 1 cut(s) 18
AjnI CCWGG 1 cut(s) 10
AloI GAACNNNNNNTCC 2 cut(s) 888, 920
AluBI AGCT 6 cut(s) 145, 532, 701, 1028, 1061, 1086
AluI AGCT 6 cut(s) 145, 532, 701, 1028, 1061, 1086
Alw21I GWGCWC 1 cut(s) 1063
AlwI GGATC 2 cut(s) 133, 1055
AlwNI CAGNNNCTG 1 cut(s) 644
AoxI GGCC 3 cut(s) 63, 487, 555
ApeKI GCWGC 2 cut(s) 827, 1025
ApoI RAATTY 1 cut(s) 518
Asp718I GGTACC 1 cut(s) 987
AspA2I CCTAGG 1 cut(s) 491
AspS9I GGNCC 2 cut(s) 488, 766
AsuC2I CCSGG 1 cut(s) 1065
AsuHPI GGTGA 2 cut(s) 98, 455
AvaII GGWCC 1 cut(s) 766
AvrII CCTAGG 1 cut(s) 491
BaeGI GKGCMC 1 cut(s) 46
BanI GGYRCC 1 cut(s) 987
BanII GRGCYC 1 cut(s) 1063
BbsI GAAGAC 2 cut(s) 411, 1009
Bbv12I GWGCWC 1 cut(s) 1063
BbvI GCAGC 2 cut(s) 839, 1037
BccI CCATC 5 cut(s) 116, 320, 328, 354, 705
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 1 cut(s) 12
BciVI GTATCC 2 cut(s) 929, 1162
BclI TGATCA 1 cut(s) 256
BcnI CCSGG 1 cut(s) 1065
BfaI CTAG 2 cut(s) 165, 492
BfmI CTRYAG 1 cut(s) 636
BfuAI ACCTGC 1 cut(s) 629
BfuI GTATCC 2 cut(s) 929, 1162
BisI GCNGC 2 cut(s) 828, 1026
BlnI CCTAGG 1 cut(s) 491
BlsI GCNGC 2 cut(s) 829, 1027
BmcAI AGTACT 2 cut(s) 977, 1041
Bme1390I CCNGG 2 cut(s) 12, 1065
Bme18I GGWCC 1 cut(s) 766
BmgBI CACGTC 1 cut(s) 18
BmgT120I GGNCC 2 cut(s) 488, 766
BmiI GGNNCC 3 cut(s) 768, 989, 1203
BmrFI CCNGG 2 cut(s) 12, 1065
BmrI ACTGGG 2 cut(s) 306, 1052
BmsI GCATC 3 cut(s) 656, 856, 949
BmuI ACTGGG 2 cut(s) 306, 1052
BpiI GAAGAC 2 cut(s) 411, 1009
BpuMI CCSGG 1 cut(s) 1065
BsaJI CCNNGG 4 cut(s) 11, 66, 491, 688
BsaWI WCCGGW 1 cut(s) 1198
BsaXI ACNNNNNCTCC 2 cut(s) 1162, 1192
Bsc4I CCNNNNNNNGG 7 cut(s) 58, 185, 300, 440, 458, 730, 969
Bse1I ACTGG 8 cut(s) 301, 463, 511, 596, 983, 989, 1001, 1047
BseBI CCWGG 1 cut(s) 12
BseDI CCNNGG 4 cut(s) 11, 66, 491, 688
BseGI GGATG 3 cut(s) 365, 716, 964
BseLI CCNNNNNNNGG 7 cut(s) 58, 185, 300, 440, 458, 730, 969
BseMII CTCAG 2 cut(s) 542, 642
BseNI ACTGG 8 cut(s) 301, 463, 511, 596, 983, 989, 1001, 1047
BseRI GAGGAG 1 cut(s) 1165
BseSI GKGCMC 1 cut(s) 46
BseXI GCAGC 2 cut(s) 839, 1037
BshFI GGCC 3 cut(s) 65, 489, 557
BshNI GGYRCC 1 cut(s) 987
BsiHKAI GWGCWC 1 cut(s) 1063
BsiSI CCGG 2 cut(s) 1065, 1199
BslFI GGGAC 2 cut(s) 28, 728
BslI CCNNNNNNNGG 7 cut(s) 58, 185, 300, 440, 458, 730, 969
BsmFI GGGAC 2 cut(s) 28, 728
BsmI GAATGC 1 cut(s) 506
BsnI GGCC 3 cut(s) 65, 489, 557
Bsp1286I GDGCHC 2 cut(s) 46, 1063
Bsp143I GATC 4 cut(s) 125, 157, 256, 1047
Bsp19I CCATGG 1 cut(s) 688
BspACI CCGC 1 cut(s) 567
BspANI GGCC 3 cut(s) 65, 489, 557
BspCNI CTCAG 2 cut(s) 541, 643
BspLI GGNNCC 3 cut(s) 768, 989, 1203
BspMAI CTGCAG 1 cut(s) 640
BspMI ACCTGC 1 cut(s) 629
BspPI GGATC 2 cut(s) 133, 1055
BspT107I GGYRCC 1 cut(s) 987
BsrI ACTGG 8 cut(s) 301, 463, 511, 596, 983, 989, 1001, 1047
BssECI CCNNGG 4 cut(s) 11, 66, 491, 688
BssMI GATC 4 cut(s) 125, 157, 256, 1047
BssNAI GTATAC 1 cut(s) 289
BssT1I CCWWGG 3 cut(s) 66, 491, 688
Bst1107I GTATAC 1 cut(s) 289
Bst2UI CCWGG 1 cut(s) 12
BstAPI GCANNNNNTGC 1 cut(s) 644
BstC8I GCNNGC 3 cut(s) 212, 534, 1011
BstDEI CTNAG 6 cut(s) 528, 651, 914, 944, 1100, 1164
BstDSI CCRYGG 1 cut(s) 688
BstF5I GGATG 3 cut(s) 365, 716, 964
BstKTI GATC 4 cut(s) 128, 160, 259, 1050
BstMBI GATC 4 cut(s) 125, 157, 256, 1047
BstMWI GCNNNNNNNGC 3 cut(s) 538, 644, 653
BstNI CCWGG 1 cut(s) 12
BstSCI CCNGG 2 cut(s) 10, 1063
BstSFI CTRYAG 1 cut(s) 636
BstSLI GKGCMC 1 cut(s) 46
BstV1I GCAGC 2 cut(s) 839, 1037
BstV2I GAAGAC 2 cut(s) 411, 1009
BstX2I RGATCY 1 cut(s) 125
BstXI CCANNNNNNTGG 2 cut(s) 18, 1001
BstYI RGATCY 1 cut(s) 125
BstZ17I GTATAC 1 cut(s) 289
BsuI GTATCC 2 cut(s) 929, 1162
BsuRI GGCC 3 cut(s) 65, 489, 557
BtgI CCRYGG 1 cut(s) 688
BtrI CACGTC 1 cut(s) 18
BtsCI GGATG 3 cut(s) 365, 716, 964
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 3 cut(s) 294, 837, 994
BveI ACCTGC 1 cut(s) 629
Cac8I GCNNGC 3 cut(s) 212, 534, 1011
CaiI CAGNNNCTG 1 cut(s) 644
Cfr13I GGNCC 2 cut(s) 488, 766
Csp6I GTAC 7 cut(s) 241, 599, 778, 836, 976, 988, 1040
CspCI CAANNNNNGTGG 2 cut(s) 534, 569
CviAII CATG 5 cut(s) 172, 260, 485, 689, 1174
CviQI GTAC 7 cut(s) 241, 599, 778, 836, 976, 988, 1040
DdeI CTNAG 6 cut(s) 528, 651, 914, 944, 1100, 1164
DpnI GATC 4 cut(s) 127, 159, 258, 1049
DpnII GATC 4 cut(s) 125, 157, 256, 1047
DraIII CACNNNGTG 1 cut(s) 300
EaeI YGGCCR 1 cut(s) 555
Ecl136II GAGCTC 1 cut(s) 1061
Eco130I CCWWGG 3 cut(s) 66, 491, 688
Eco24I GRGCYC 1 cut(s) 1063
Eco47I GGWCC 1 cut(s) 766
Eco53kI GAGCTC 1 cut(s) 1061
Eco57I CTGAAG 1 cut(s) 908
EcoICRI GAGCTC 1 cut(s) 1061
EcoO109I RGGNCCY 1 cut(s) 766
EcoRII CCWGG 1 cut(s) 10
EcoT14I CCWWGG 3 cut(s) 66, 491, 688
EcoT38I GRGCYC 1 cut(s) 1063
ErhI CCWWGG 3 cut(s) 66, 491, 688
FaeI CATG 5 cut(s) 175, 263, 488, 692, 1177
FalI AAGNNNNNCTT 2 cut(s) 614, 646
FaqI GGGAC 2 cut(s) 28, 728
FatI CATG 5 cut(s) 171, 259, 484, 688, 1173
FauNDI CATATG 1 cut(s) 184
FbaI TGATCA 1 cut(s) 256
FblI GTMKAC 1 cut(s) 288
Fnu4HI GCNGC 2 cut(s) 828, 1026
FokI GGATG 3 cut(s) 372, 723, 971
FriOI GRGCYC 1 cut(s) 1063
Fsp4HI GCNGC 2 cut(s) 828, 1026
FspBI CTAG 2 cut(s) 165, 492
GluI GCNGC 2 cut(s) 828, 1026
HaeIII GGCC 3 cut(s) 65, 489, 557
HapII CCGG 2 cut(s) 1065, 1199
Hin1II CATG 5 cut(s) 175, 263, 488, 692, 1177
HinfI GANTC 3 cut(s) 7, 897, 1195
HpaII CCGG 2 cut(s) 1065, 1199
HphI GGTGA 2 cut(s) 98, 455
Hpy166II GTNNAC 4 cut(s) 243, 289, 601, 1033
Hpy188I TCNGA 4 cut(s) 142, 199, 652, 927
Hpy188III TCNNGA 2 cut(s) 321, 1189
Hpy8I GTNNAC 4 cut(s) 243, 289, 601, 1033
HpyAV CCTTC 3 cut(s) 734, 932, 999
HpyCH4IV ACGT 1 cut(s) 17
HpyCH4V TGCA 6 cut(s) 210, 406, 638, 647, 827, 1013
HpyF10VI GCNNNNNNNGC 3 cut(s) 538, 644, 653
HpyF3I CTNAG 6 cut(s) 528, 651, 914, 944, 1100, 1164
HpySE526I ACGT 1 cut(s) 17
Hsp92II CATG 5 cut(s) 175, 263, 488, 692, 1177
KpnI GGTACC 1 cut(s) 991
Ksp22I TGATCA 1 cut(s) 256
Kzo9I GATC 4 cut(s) 125, 157, 256, 1047
LmnI GCTCC 2 cut(s) 1058, 1066
Lsp1109I GCAGC 2 cut(s) 839, 1037
LweI GCATC 3 cut(s) 656, 856, 949
MaeI CTAG 2 cut(s) 165, 492
MaeII ACGT 1 cut(s) 17
MalI GATC 4 cut(s) 127, 159, 258, 1049
MboI GATC 4 cut(s) 125, 157, 256, 1047
MboII GAAGA 8 cut(s) 411, 691, 694, 776, 1009, 1012, 1090, 1103
MfeI CAATTG 1 cut(s) 738
MflI RGATCY 1 cut(s) 125
MhlI GDGCHC 2 cut(s) 46, 1063
MmeI TCCRAC 1 cut(s) 541
MnlI CCTC 8 cut(s) 27, 55, 231, 646, 881, 1143, 1146, 1188
MseI TTAA 4 cut(s) 153, 366, 390, 669
MspA1I CMGCKG 1 cut(s) 1028
MspI CCGG 2 cut(s) 1065, 1199
MspR9I CCNGG 2 cut(s) 12, 1065
MunI CAATTG 1 cut(s) 738
Mva1269I GAATGC 1 cut(s) 506
MvaI CCWGG 1 cut(s) 12
MwoI GCNNNNNNNGC 3 cut(s) 538, 644, 653
NciI CCSGG 1 cut(s) 1065
NcoI CCATGG 1 cut(s) 688
NdeI CATATG 1 cut(s) 184
NdeII GATC 4 cut(s) 125, 157, 256, 1047
NlaIII CATG 5 cut(s) 175, 263, 488, 692, 1177
NlaIV GGNNCC 3 cut(s) 768, 989, 1203
NmeAIII GCCGAG 1 cut(s) 517
PctI GAATGC 1 cut(s) 506
PfeI GAWTC 3 cut(s) 7, 897, 1195
PflMI CCANNNNNTGG 3 cut(s) 185, 300, 458
PfoI TCCNGGA 1 cut(s) 1063
PkrI GCNGC 2 cut(s) 829, 1027
PpuMI RGGWCCY 1 cut(s) 766
Psp124BI GAGCTC 1 cut(s) 1063
Psp5II RGGWCCY 1 cut(s) 766
Psp6I CCWGG 1 cut(s) 10
PspGI CCWGG 1 cut(s) 10
PspN4I GGNNCC 3 cut(s) 768, 989, 1203
PspPI GGNCC 2 cut(s) 488, 766
PspPPI RGGWCCY 1 cut(s) 766
PstI CTGCAG 1 cut(s) 640
PstNI CAGNNNCTG 1 cut(s) 644
PsuI RGATCY 1 cut(s) 125
PvuII CAGCTG 1 cut(s) 1028
RsaI GTAC 7 cut(s) 242, 600, 779, 837, 977, 989, 1041
RsaNI GTAC 7 cut(s) 241, 599, 778, 836, 976, 988, 1040
SacI GAGCTC 1 cut(s) 1063
SaqAI TTAA 4 cut(s) 153, 366, 390, 669
SatI GCNGC 2 cut(s) 828, 1026
Sau3AI GATC 4 cut(s) 125, 157, 256, 1047
Sau96I GGNCC 2 cut(s) 488, 766
ScaI AGTACT 2 cut(s) 977, 1041
ScrFI CCNGG 2 cut(s) 12, 1065
SduI GDGCHC 2 cut(s) 46, 1063
SfaNI GCATC 3 cut(s) 656, 856, 949
SfcI CTRYAG 1 cut(s) 636
SinI GGWCC 1 cut(s) 766
SsiI CCGC 1 cut(s) 567
SspI AATATT 1 cut(s) 696
SspMI CTAG 2 cut(s) 165, 492
SstI GAGCTC 1 cut(s) 1063
StyD4I CCNGG 2 cut(s) 10, 1063
StyI CCWWGG 3 cut(s) 66, 491, 688
TaiI ACGT 1 cut(s) 20
TaqI TCGA 1 cut(s) 791
TatI WGTACW 3 cut(s) 598, 975, 1039
TfiI GAWTC 3 cut(s) 7, 897, 1195
Tru1I TTAA 4 cut(s) 153, 366, 390, 669
Tru9I TTAA 4 cut(s) 153, 366, 390, 669
TscAI CASTG 3 cut(s) 301, 837, 1001
TseI GCWGC 2 cut(s) 827, 1025
TspDTI ATGAA 8 cut(s) 160, 183, 281, 473, 692, 776, 866, 1208
TspRI CASTG 3 cut(s) 301, 837, 1001
Van91I CCANNNNNTGG 3 cut(s) 185, 300, 458
VpaK11BI GGWCC 1 cut(s) 766
XapI RAATTY 1 cut(s) 518
XcmI CCANNNNNNNNNTGG 1 cut(s) 998
XmaJI CCTAGG 1 cut(s) 491
XmiI GTMKAC 1 cut(s) 288
XspI CTAG 2 cut(s) 165, 492
ZrmI AGTACT 2 cut(s) 977, 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.