Prupe.2G188200_v2.0.a1

Possible catecholamine-binding domain present in a variety of eukaryotic proteins.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0013451
Physical Location & Seq
Reverse (-)
22853717 .. 22856097
2381 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G188200.1

Sequence Viewer

Length: 1218 bp
ATGGCGAGTTCGGGATCCTGGTCTTTGGCTTTGAGGTTTGCTTGCAGGTTATGTGTTATTCTGGCCCTTGTCTTGGATACCAAGATTTCGGTTGTGGCTGATGATGACAGTAATGTTCCGGGAGTCAATAGTGCCGGTGTGGGTGGCGGAGTATCAGAGCTATGTGATAATGAGCTGAGTAGTTTTATGCTACCACCATACGGTAATTTATCAGATATAGTCTGTAGGCCTATTTGGAACACTTTTGTTTTGAGGTACTCTCAGACTGAAGATCATGTCATGAACATTATATTGTCTGCTGTATACACCACTGGATGGGTAGGATTGGGATTTTCCAAAGATGGCATGATGGTTGGTTCAAGTGCCATGGTGGGATGGGTTAACAGAAAAGGCCAAGCAAGAATTAAGCAATACTATTTGCAGGGTTCAAAGGTGTCAGAAGTCATACCAGACAAAGGTGAATTGCCACTCACCGGCATCCCTGCTTCCCTTGTGCTTCATGGCCCCAGAATTTACCTGGCATTTCAGTTGAAATTCCCGACTCATCTCGCCCGGCAGCCAATTATCTTGGCTGTAGGAAGTGGGTACCCTAAGCACCACCACCTAACCAAACACAACGATAAAACAACCATCCTGTTCGATTTCTCTGCAGGTTCTGCATCTGAGGCACCTACAAACTTTGGGCAGATGAAGAAGAACCATGGAATATTGGCTATATTTGGATGGGGTCTAATAATTCCTGTTGGGGCAATTGTCCCAAGATACTTCAAGCACAAGGACCCTTTGTGGTACTATCTCCATGCACTTATTCAATTTGTTGGGTTTGTCATTGGGCTGGCAGCTGTGGTACTTGGGCAACAACTCTATACCAAAATAGGAGCCAACTTCCCAACACATAGAGCCATAGGGATCTTTGTTCTTGTGCTTAGTATCCTTCAGATACTGGCATTTTTTCTAAGACCCAACCAGGATGCCAAGATTAGAAAGTACTGGAATTGGTACCACCACTGGCTTGGAAGGTTTGCAGTCTTCTTTGCAGCTGTGAACATACTTCTGGGGATCAAAATTGGAGCTGCAGGAAATGATTGGAAGATAGGCTACGGGTTTCTTCTCAGTGTGATTCTGCTCTCAGTCATTGTTTTAGAAGCATTGGCAAGGATGAGGAGAACAGAGAAAGATACTTTGCCTTCAAACTTCCAAATGAATCCAGTTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cytochrom_B561 DOMON

Protein Analysis

406

Amino Acids

44.74

Weight (kDa)

9.55

Isoelectric Point (pI)

27.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013451)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61750 AT3G61750
fragaria_vesca FvH4_7g16430
malus_domestica MD01G1080600.v1.1 MD07G1149500.v1.1
prunus_persica Prupe.2G188200_v2.0.a1
pyrus_communis pycom01g10870 pycom07g14810
rosa_chinensis RchiOBHm_Chr1g0359441
rosa_laevigata RLG00000027869
rosa_multiflora Rmu_ssc0000358.1_g000010
rosa_roxburghii Rroxscaffold_4G00297000
rosa_rugosa Rorug01G0271400
rosa_samantha Rh1AG284700 Rh1BG250700 Rh1CG268800 Rh1DG279800
rosa_wichuraiana Rw1G025290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 36, 641
Acc65I GGTACC 2 cut(s) 585, 999
AccB1I GGYRCC 3 cut(s) 585, 667, 999
AccB7I CCANNNNNTGG 1 cut(s) 315
AccI GTMKAC 1 cut(s) 303
AciI CCGC 1 cut(s) 147
AclWI GGATC 4 cut(s) 9, 22, 917, 1067
AcsI RAATTY 2 cut(s) 510, 533
AcuI CTGAAG 2 cut(s) 288, 920
AfaI GTAC 6 cut(s) 257, 587, 791, 849, 989, 1001
AfiI CCNNNNNNNGG 5 cut(s) 73, 200, 315, 455, 473
AgsI TTSAA 7 cut(s) 360, 429, 532, 769, 812, 1191, 1214
AjnI CCWGG 3 cut(s) 17, 516, 966
AluBI AGCT 5 cut(s) 160, 175, 842, 1040, 1073
AluI AGCT 5 cut(s) 160, 175, 842, 1040, 1073
AlwI GGATC 4 cut(s) 9, 22, 917, 1067
AlwNI CAGNNNCTG 2 cut(s) 656, 943
AoxI GGCC 4 cut(s) 63, 227, 391, 502
ApeKI GCWGC 4 cut(s) 556, 839, 1037, 1073
ApoI RAATTY 2 cut(s) 510, 533
Asp718I GGTACC 2 cut(s) 585, 999
AspS9I GGNCC 3 cut(s) 64, 503, 778
AsuC2I CCSGG 2 cut(s) 120, 553
AsuHPI GGTGA 2 cut(s) 463, 470
AvaII GGWCC 1 cut(s) 778
BamHI GGATCC 1 cut(s) 14
BanI GGYRCC 3 cut(s) 585, 667, 999
BarI GAAGNNNNNNTAC 2 cut(s) 1082, 1114
BbsI GAAGAC 1 cut(s) 1021
BbvI GCAGC 4 cut(s) 568, 851, 1049, 1060
BccI CCATC 6 cut(s) 309, 335, 343, 369, 638, 717
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciT130I CCWGG 3 cut(s) 19, 518, 968
BciVI GTATCC 2 cut(s) 70, 941
BcnI CCSGG 2 cut(s) 120, 553
BfmI CTRYAG 4 cut(s) 223, 573, 648, 1074
BfuAI ACCTGC 2 cut(s) 36, 641
BfuI GTATCC 2 cut(s) 70, 941
BisI GCNGC 4 cut(s) 557, 840, 1038, 1074
BlsI GCNGC 4 cut(s) 558, 841, 1039, 1075
BmcAI AGTACT 1 cut(s) 989
Bme1390I CCNGG 5 cut(s) 19, 120, 518, 553, 968
Bme18I GGWCC 1 cut(s) 778
BmgT120I GGNCC 3 cut(s) 64, 503, 778
BmiI GGNNCC 7 cut(s) 16, 505, 587, 669, 780, 880, 1001
BmrFI CCNGG 5 cut(s) 19, 120, 518, 553, 968
BmsI GCATC 3 cut(s) 486, 668, 961
BpiI GAAGAC 1 cut(s) 1021
BplI GAGNNNNNCTC 2 cut(s) 244, 276
Bpu10I CCTNAGC 1 cut(s) 591
BpuMI CCSGG 2 cut(s) 120, 553
BsaJI CCNNGG 2 cut(s) 366, 700
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 200, 315, 455, 473
Bse118I RCCGGY 2 cut(s) 134, 473
Bse1I ACTGG 5 cut(s) 316, 948, 995, 1013, 1208
BseBI CCWGG 3 cut(s) 19, 518, 968
BseDI CCNNGG 2 cut(s) 366, 700
BseGI GGATG 7 cut(s) 320, 380, 477, 630, 728, 976, 1164
BseLI CCNNNNNNNGG 5 cut(s) 73, 200, 315, 455, 473
BseMII CTCAG 5 cut(s) 167, 275, 654, 1126, 1143
BseNI ACTGG 5 cut(s) 316, 948, 995, 1013, 1208
BseRI GAGGAG 1 cut(s) 1177
BseXI GCAGC 4 cut(s) 568, 851, 1049, 1060
BshFI GGCC 4 cut(s) 65, 229, 393, 504
BshNI GGYRCC 3 cut(s) 585, 667, 999
BsiSI CCGG 4 cut(s) 119, 135, 474, 553
BslFI GGGAC 1 cut(s) 740
BslI CCNNNNNNNGG 5 cut(s) 73, 200, 315, 455, 473
BsmFI GGGAC 1 cut(s) 740
BsnI GGCC 4 cut(s) 65, 229, 393, 504
Bsp143I GATC 4 cut(s) 14, 271, 909, 1059
Bsp19I CCATGG 2 cut(s) 366, 700
BspACI CCGC 1 cut(s) 147
BspANI GGCC 4 cut(s) 65, 229, 393, 504
BspCNI CTCAG 5 cut(s) 168, 274, 655, 1125, 1142
BspHI TCATGA 1 cut(s) 279
BspLI GGNNCC 7 cut(s) 16, 505, 587, 669, 780, 880, 1001
BspMAI CTGCAG 2 cut(s) 652, 1078
BspMI ACCTGC 2 cut(s) 36, 641
BspPI GGATC 4 cut(s) 9, 22, 917, 1067
BspT107I GGYRCC 3 cut(s) 585, 667, 999
BsrFI RCCGGY 2 cut(s) 134, 473
BsrI ACTGG 5 cut(s) 316, 948, 995, 1013, 1208
BssAI RCCGGY 2 cut(s) 134, 473
BssECI CCNNGG 2 cut(s) 366, 700
BssMI GATC 4 cut(s) 14, 271, 909, 1059
BssNAI GTATAC 1 cut(s) 304
BssT1I CCWWGG 2 cut(s) 366, 700
Bst1107I GTATAC 1 cut(s) 304
Bst2UI CCWGG 3 cut(s) 19, 518, 968
Bst4CI ACNGT 2 cut(s) 110, 203
BstAPI GCANNNNNTGC 1 cut(s) 656
BstC8I GCNNGC 2 cut(s) 43, 837
BstDEI CTNAG 8 cut(s) 176, 261, 591, 663, 926, 956, 1112, 1129
BstDSI CCRYGG 2 cut(s) 366, 700
BstF5I GGATG 7 cut(s) 320, 380, 477, 630, 728, 976, 1164
BstKTI GATC 4 cut(s) 17, 274, 912, 1062
BstMBI GATC 4 cut(s) 14, 271, 909, 1059
BstMWI GCNNNNNNNGC 2 cut(s) 656, 665
BstNI CCWGG 3 cut(s) 19, 518, 968
BstSCI CCNGG 5 cut(s) 17, 118, 516, 551, 966
BstSFI CTRYAG 4 cut(s) 223, 573, 648, 1074
BstV1I GCAGC 4 cut(s) 568, 851, 1049, 1060
BstV2I GAAGAC 1 cut(s) 1021
BstX2I RGATCY 2 cut(s) 14, 909
BstXI CCANNNNNNTGG 1 cut(s) 1013
BstYI RGATCY 2 cut(s) 14, 909
BstZ17I GTATAC 1 cut(s) 304
BsuI GTATCC 2 cut(s) 70, 941
BsuRI GGCC 4 cut(s) 65, 229, 393, 504
BtgI CCRYGG 2 cut(s) 366, 700
BtsCI GGATG 7 cut(s) 320, 380, 477, 630, 728, 976, 1164
BtsIMutI CAGTG 3 cut(s) 309, 1006, 1120
BveI ACCTGC 2 cut(s) 36, 641
Cac8I GCNNGC 2 cut(s) 43, 837
CaiI CAGNNNCTG 2 cut(s) 656, 943
CciI TCATGA 1 cut(s) 279
Cfr10I RCCGGY 2 cut(s) 134, 473
Cfr13I GGNCC 3 cut(s) 64, 503, 778
Csp6I GTAC 6 cut(s) 256, 586, 790, 848, 988, 1000
CviAII CATG 7 cut(s) 275, 280, 346, 367, 500, 701, 800
CviQI GTAC 6 cut(s) 256, 586, 790, 848, 988, 1000
DdeI CTNAG 8 cut(s) 176, 261, 591, 663, 926, 956, 1112, 1129
DpnI GATC 4 cut(s) 16, 273, 911, 1061
DpnII GATC 4 cut(s) 14, 271, 909, 1059
EciI GGCGGA 1 cut(s) 162
Eco130I CCWWGG 2 cut(s) 366, 700
Eco147I AGGCCT 1 cut(s) 229
Eco47I GGWCC 1 cut(s) 778
Eco57I CTGAAG 2 cut(s) 288, 920
EcoO109I RGGNCCY 1 cut(s) 778
EcoRII CCWGG 3 cut(s) 17, 516, 966
EcoT14I CCWWGG 2 cut(s) 366, 700
ErhI CCWWGG 2 cut(s) 366, 700
FaeI CATG 7 cut(s) 278, 283, 349, 370, 503, 704, 803
FaqI GGGAC 1 cut(s) 740
FatI CATG 7 cut(s) 274, 279, 345, 366, 499, 700, 799
FblI GTMKAC 1 cut(s) 303
Fnu4HI GCNGC 4 cut(s) 557, 840, 1038, 1074
FokI GGATG 7 cut(s) 327, 387, 464, 617, 735, 983, 1171
Fsp4HI GCNGC 4 cut(s) 557, 840, 1038, 1074
GluI GCNGC 4 cut(s) 557, 840, 1038, 1074
HaeIII GGCC 4 cut(s) 65, 229, 393, 504
HapII CCGG 4 cut(s) 119, 135, 474, 553
Hin1II CATG 7 cut(s) 278, 283, 349, 370, 503, 704, 803
HincII GTYRAC 1 cut(s) 382
HindII GTYRAC 1 cut(s) 382
HinfI GANTC 4 cut(s) 123, 541, 1120, 1204
HpaI GTTAAC 1 cut(s) 382
HpaII CCGG 4 cut(s) 119, 135, 474, 553
HphI GGTGA 2 cut(s) 463, 470
Hpy166II GTNNAC 3 cut(s) 304, 382, 1045
Hpy188I TCNGA 6 cut(s) 157, 214, 264, 439, 664, 939
Hpy188III TCNNGA 3 cut(s) 12, 280, 538
Hpy8I GTNNAC 3 cut(s) 304, 382, 1045
HpyAV CCTTC 3 cut(s) 944, 1011, 1197
HpyCH4III ACNGT 2 cut(s) 110, 203
HpyCH4V TGCA 8 cut(s) 45, 421, 650, 659, 803, 1025, 1037, 1076
HpyF10VI GCNNNNNNNGC 2 cut(s) 656, 665
HpyF3I CTNAG 8 cut(s) 176, 261, 591, 663, 926, 956, 1112, 1129
Hsp92II CATG 7 cut(s) 278, 283, 349, 370, 503, 704, 803
KpnI GGTACC 2 cut(s) 589, 1003
KspAI GTTAAC 1 cut(s) 382
Kzo9I GATC 4 cut(s) 14, 271, 909, 1059
LmnI GCTCC 2 cut(s) 878, 1070
Lsp1109I GCAGC 4 cut(s) 568, 851, 1049, 1060
LweI GCATC 3 cut(s) 486, 668, 961
MalI GATC 4 cut(s) 16, 273, 911, 1061
MboI GATC 4 cut(s) 14, 271, 909, 1059
MboII GAAGA 6 cut(s) 281, 703, 706, 1021, 1100, 1102
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 2 cut(s) 14, 909
MlyI GAGTC 2 cut(s) 132, 535
MnlI CCTC 4 cut(s) 27, 246, 658, 1155
MseI TTAA 2 cut(s) 381, 405
MspA1I CMGCKG 2 cut(s) 842, 1040
MspI CCGG 4 cut(s) 119, 135, 474, 553
MspR9I CCNGG 5 cut(s) 19, 120, 518, 553, 968
MunI CAATTG 1 cut(s) 750
MvaI CCWGG 3 cut(s) 19, 518, 968
MwoI GCNNNNNNNGC 2 cut(s) 656, 665
NciI CCSGG 2 cut(s) 120, 553
NcoI CCATGG 2 cut(s) 366, 700
NdeII GATC 4 cut(s) 14, 271, 909, 1059
NlaIII CATG 7 cut(s) 278, 283, 349, 370, 503, 704, 803
NlaIV GGNNCC 7 cut(s) 16, 505, 587, 669, 780, 880, 1001
PagI TCATGA 1 cut(s) 279
PceI AGGCCT 1 cut(s) 229
PfeI GAWTC 2 cut(s) 1120, 1204
PflMI CCANNNNNTGG 1 cut(s) 315
PfoI TCCNGGA 1 cut(s) 118
PkrI GCNGC 4 cut(s) 558, 841, 1039, 1075
PleI GAGTC 2 cut(s) 131, 535
PpsI GAGTC 2 cut(s) 131, 535
PpuMI RGGWCCY 1 cut(s) 778
Psp5II RGGWCCY 1 cut(s) 778
Psp6I CCWGG 3 cut(s) 17, 516, 966
PspGI CCWGG 3 cut(s) 17, 516, 966
PspN4I GGNNCC 7 cut(s) 16, 505, 587, 669, 780, 880, 1001
PspPI GGNCC 3 cut(s) 64, 503, 778
PspPPI RGGWCCY 1 cut(s) 778
PstI CTGCAG 2 cut(s) 652, 1078
PstNI CAGNNNCTG 2 cut(s) 656, 943
PsuI RGATCY 2 cut(s) 14, 909
PvuII CAGCTG 2 cut(s) 842, 1040
RsaI GTAC 6 cut(s) 257, 587, 791, 849, 989, 1001
RsaNI GTAC 6 cut(s) 256, 586, 790, 848, 988, 1000
SaqAI TTAA 2 cut(s) 381, 405
SatI GCNGC 4 cut(s) 557, 840, 1038, 1074
Sau3AI GATC 4 cut(s) 14, 271, 909, 1059
Sau96I GGNCC 3 cut(s) 64, 503, 778
ScaI AGTACT 1 cut(s) 989
SchI GAGTC 2 cut(s) 132, 535
ScrFI CCNGG 5 cut(s) 19, 120, 518, 553, 968
SfaNI GCATC 3 cut(s) 486, 668, 961
SfcI CTRYAG 4 cut(s) 223, 573, 648, 1074
SinI GGWCC 1 cut(s) 778
SseBI AGGCCT 1 cut(s) 229
SsiI CCGC 1 cut(s) 147
SspI AATATT 1 cut(s) 708
StuI AGGCCT 1 cut(s) 229
StyD4I CCNGG 5 cut(s) 17, 118, 516, 551, 966
StyI CCWWGG 2 cut(s) 366, 700
TaaI ACNGT 2 cut(s) 110, 203
TaqI TCGA 1 cut(s) 639
TatI WGTACW 1 cut(s) 987
TfiI GAWTC 2 cut(s) 1120, 1204
Tru1I TTAA 2 cut(s) 381, 405
Tru9I TTAA 2 cut(s) 381, 405
TscAI CASTG 3 cut(s) 316, 1013, 1120
TseI GCWGC 4 cut(s) 556, 839, 1037, 1073
TspDTI ATGAA 4 cut(s) 296, 488, 704, 1217
TspRI CASTG 3 cut(s) 316, 1013, 1120
Van91I CCANNNNNTGG 1 cut(s) 315
VpaK11BI GGWCC 1 cut(s) 778
XapI RAATTY 2 cut(s) 510, 533
XcmI CCANNNNNNNNNTGG 2 cut(s) 514, 1010
XmiI GTMKAC 1 cut(s) 303
ZrmI AGTACT 1 cut(s) 989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.