MD07G1149500.v1.1

Possible catecholamine-binding domain present in a variety of eukaryotic proteins.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0013451
Physical Location & Seq
Reverse (-)
21797201 .. 21798424
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1149500.v1.1.491

Sequence Viewer

Length: 954 bp
ATGGTGTTGTCACTGCCTGTTCAAGCCTTGGATCCCATTCCTAAGTTTTTGGTCTTTCCAATGGCGAGCCCGGGGTATTGGGTGGTTTTTGCTTCGATGTTTGCTTTCAGGCTATGTATTCTGACCCTTGTCTTGGAGACCAAGTTTTTTGTTATGGCTGATGATGACAGTTATGTTCCGGGGGTTAATAGCGTCAGCAGGGGCAATGTTGAATCGGAGCTTTGTGACAATGATCTGAGCAATTTTATGCTACCACCATATAATAATTCATCATCTGATCTAGTCTGCAGGCCTATTTGGAGCACTTTTGTTCTGAGAACAGAAGATCATGTCGTGAACATTATATTATCTGCTGTATACACCACAGGATGGGTAGGAATGGGATTTTCCAGAAATGGAATGATGGTTGGTTCAAGTGCAATAGTGGGATGGATTAACAAAAAAGGCCAAGTAAGAATTAAGCAATACTATTTGCAAGGCTCCAAGGTGTCACAAGTCATACCAGACAAAGGTGAATTGCCACTCACTGGCATTCCTGCTTCTGTTGTGATTCATGGACCTAGAATTTACTTGGCTTTTCAGATGAAATTCAAAACTCATCTTGCTCGTCAGCCAATCATCTTAGCTATCGGAAGCGGTTCCCCCAAGCACAACCACCTAACCATACACAATGATAAAACAACCGTCTTGTTCGATTTCTCTTTAGGCTCAGCATCTGTGGGAGAGGCACCTAGTGATCTTGGACAAATGAAGAAGAACCATGGAATATTGGCTATATTTGGATGGGGTCTAATAATTCCTATTGGGGCAATTGTGCCAAGATACTTGAAGCACAAGGAACCTTTGTGGTACTATCTCCATTCAATGATTCAATTTGTTGGATTTGTGATTCAATTTGTTAGATATCCAACTCTCCTGGTACCAAAGAAGGAGAGTTGGATATCTATAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cytochrom_B561 DOMON

Protein Analysis

318

Amino Acids

35.32

Weight (kDa)

9.23

Isoelectric Point (pI)

31.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DOMON PF03351 108 - 170 9.6e-10 DOMON domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013451)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61750 AT3G61750
fragaria_vesca FvH4_7g16430
malus_domestica MD01G1080600.v1.1 MD07G1149500.v1.1
prunus_persica Prupe.2G188200_v2.0.a1
pyrus_communis pycom01g10870 pycom07g14810
rosa_chinensis RchiOBHm_Chr1g0359441
rosa_laevigata RLG00000027869
rosa_multiflora Rmu_ssc0000358.1_g000010
rosa_roxburghii Rroxscaffold_4G00297000
rosa_rugosa Rorug01G0271400
rosa_samantha Rh1AG284700 Rh1BG250700 Rh1CG268800 Rh1DG279800
rosa_wichuraiana Rw1G025290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 919
AccB1I GGYRCC 2 cut(s) 727, 919
AccB7I CCANNNNNTGG 2 cut(s) 369, 527
AccI GTMKAC 1 cut(s) 357
AciI CCGC 1 cut(s) 636
AclWI GGATC 2 cut(s) 26, 39
AcsI RAATTY 2 cut(s) 564, 587
AdeI CACNNNGTG 1 cut(s) 734
AfaI GTAC 2 cut(s) 851, 921
AfiI CCNNNNNNNGG 4 cut(s) 133, 369, 509, 527
AgsI TTSAA 8 cut(s) 23, 212, 414, 592, 829, 864, 872, 893
AjnI CCWGG 1 cut(s) 915
AluBI AGCT 2 cut(s) 220, 626
AluI AGCT 2 cut(s) 220, 626
Alw21I GWGCWC 1 cut(s) 305
Alw26I GTCTC 1 cut(s) 131
AlwI GGATC 2 cut(s) 26, 39
AlwNI CAGNNNCTG 1 cut(s) 716
Ama87I CYCGRG 1 cut(s) 70
AoxI GGCC 2 cut(s) 290, 445
ApoI RAATTY 2 cut(s) 564, 587
Asp700I GAANNNNTTC 1 cut(s) 637
Asp718I GGTACC 1 cut(s) 919
AspS9I GGNCC 1 cut(s) 557
AsuC2I CCSGG 3 cut(s) 71, 72, 180
AsuHPI GGTGA 1 cut(s) 524
AvaI CYCGRG 1 cut(s) 70
AvaII GGWCC 1 cut(s) 557
BamHI GGATCC 1 cut(s) 31
BanI GGYRCC 2 cut(s) 727, 919
BanII GRGCYC 1 cut(s) 71
Bbv12I GWGCWC 1 cut(s) 305
BccI CCATC 4 cut(s) 363, 397, 423, 777
BciT130I CCWGG 1 cut(s) 917
BcnI CCSGG 3 cut(s) 71, 72, 180
BcoDI GTCTC 1 cut(s) 131
BfaI CTAG 4 cut(s) 281, 561, 732, 952
BfmI CTRYAG 1 cut(s) 286
BlpI GCTNAGC 1 cut(s) 709
Bme1390I CCNGG 4 cut(s) 71, 72, 180, 917
Bme18I GGWCC 1 cut(s) 557
BmeT110I CYCGRG 1 cut(s) 70
BmgT120I GGNCC 1 cut(s) 557
BmiI GGNNCC 6 cut(s) 33, 481, 640, 729, 840, 921
BmrFI CCNGG 4 cut(s) 71, 72, 180, 917
BmsI GCATC 1 cut(s) 722
BoxI GACNNNNGTC 1 cut(s) 128
Bpu1102I GCTNAGC 1 cut(s) 709
BpuMI CCSGG 3 cut(s) 71, 72, 180
BsaI GGTCTC 1 cut(s) 131
BsaJI CCNNGG 6 cut(s) 27, 70, 71, 179, 483, 760
BsaXI ACNNNNNCTCC 2 cut(s) 128, 158
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 369, 509, 527
Bse1I ACTGG 1 cut(s) 532
Bse3DI GCAATG 1 cut(s) 211
BseBI CCWGG 1 cut(s) 917
BseDI CCNNGG 6 cut(s) 27, 70, 71, 179, 483, 760
BseGI GGATG 3 cut(s) 374, 434, 788
BseLI CCNNNNNNNGG 4 cut(s) 133, 369, 509, 527
BseMI GCAATG 1 cut(s) 211
BseMII CTCAG 3 cut(s) 227, 305, 723
BseNI ACTGG 1 cut(s) 532
BshFI GGCC 2 cut(s) 292, 447
BshNI GGYRCC 2 cut(s) 727, 919
BsiHKAI GWGCWC 1 cut(s) 305
BsiHKCI CYCGRG 1 cut(s) 70
BsiSI CCGG 2 cut(s) 71, 179
BslI CCNNNNNNNGG 4 cut(s) 133, 369, 509, 527
BsmAI GTCTC 1 cut(s) 131
BsmI GAATGC 1 cut(s) 531
BsnI GGCC 2 cut(s) 292, 447
Bso31I GGTCTC 1 cut(s) 131
BsoBI CYCGRG 1 cut(s) 70
Bsp1286I GDGCHC 2 cut(s) 71, 305
Bsp143I GATC 5 cut(s) 31, 232, 277, 325, 736
Bsp1720I GCTNAGC 1 cut(s) 709
Bsp19I CCATGG 1 cut(s) 760
BspACI CCGC 1 cut(s) 636
BspANI GGCC 2 cut(s) 292, 447
BspCNI CTCAG 3 cut(s) 228, 306, 722
BspLI GGNNCC 6 cut(s) 33, 481, 640, 729, 840, 921
BspMAI CTGCAG 1 cut(s) 290
BspPI GGATC 2 cut(s) 26, 39
BspT107I GGYRCC 2 cut(s) 727, 919
BspTNI GGTCTC 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 211
BsrI ACTGG 1 cut(s) 532
BssECI CCNNGG 6 cut(s) 27, 70, 71, 179, 483, 760
BssMI GATC 5 cut(s) 31, 232, 277, 325, 736
BssNAI GTATAC 1 cut(s) 358
BssT1I CCWWGG 3 cut(s) 27, 483, 760
Bst1107I GTATAC 1 cut(s) 358
Bst2UI CCWGG 1 cut(s) 917
Bst4CI ACNGT 2 cut(s) 170, 685
BstC8I GCNNGC 2 cut(s) 67, 290
BstDEI CTNAG 5 cut(s) 42, 236, 314, 622, 709
BstDSI CCRYGG 1 cut(s) 760
BstF5I GGATG 3 cut(s) 374, 434, 788
BstKTI GATC 5 cut(s) 34, 235, 280, 328, 739
BstMAI GTCTC 1 cut(s) 131
BstMBI GATC 5 cut(s) 31, 232, 277, 325, 736
BstNI CCWGG 1 cut(s) 917
BstPAI GACNNNNGTC 1 cut(s) 128
BstSCI CCNGG 4 cut(s) 69, 70, 178, 915
BstSFI CTRYAG 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 31
BstYI RGATCY 1 cut(s) 31
BstZ17I GTATAC 1 cut(s) 358
BsuRI GGCC 2 cut(s) 292, 447
BtgI CCRYGG 1 cut(s) 760
BtsCI GGATG 3 cut(s) 374, 434, 788
BtsI GCAGTG 1 cut(s) 11
BtsIMutI CAGTG 2 cut(s) 11, 525
Cac8I GCNNGC 2 cut(s) 67, 290
CaiI CAGNNNCTG 1 cut(s) 716
Cfr13I GGNCC 1 cut(s) 557
Cfr9I CCCGGG 1 cut(s) 70
CseI GACGC 1 cut(s) 181
Csp6I GTAC 2 cut(s) 850, 920
CviAII CATG 3 cut(s) 329, 554, 761
CviQI GTAC 2 cut(s) 850, 920
DdeI CTNAG 5 cut(s) 42, 236, 314, 622, 709
DpnI GATC 5 cut(s) 33, 234, 279, 327, 738
DpnII GATC 5 cut(s) 31, 232, 277, 325, 736
DraIII CACNNNGTG 1 cut(s) 734
Eco130I CCWWGG 3 cut(s) 27, 483, 760
Eco147I AGGCCT 1 cut(s) 292
Eco24I GRGCYC 1 cut(s) 71
Eco31I GGTCTC 1 cut(s) 131
Eco32I GATATC 2 cut(s) 905, 942
Eco47I GGWCC 1 cut(s) 557
Eco88I CYCGRG 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 915
EcoRV GATATC 2 cut(s) 905, 942
EcoT14I CCWWGG 3 cut(s) 27, 483, 760
EcoT38I GRGCYC 1 cut(s) 71
ErhI CCWWGG 3 cut(s) 27, 483, 760
FaeI CATG 3 cut(s) 332, 557, 764
FatI CATG 3 cut(s) 328, 553, 760
FblI GTMKAC 1 cut(s) 357
FokI GGATG 3 cut(s) 381, 441, 795
FriOI GRGCYC 1 cut(s) 71
FspBI CTAG 4 cut(s) 281, 561, 732, 952
HaeIII GGCC 2 cut(s) 292, 447
HapII CCGG 2 cut(s) 71, 179
HgaI GACGC 1 cut(s) 181
Hin1II CATG 3 cut(s) 332, 557, 764
HinfI GANTC 4 cut(s) 212, 550, 868, 889
HpaII CCGG 2 cut(s) 71, 179
HphI GGTGA 1 cut(s) 524
Hpy166II GTNNAC 2 cut(s) 337, 358
Hpy188I TCNGA 7 cut(s) 123, 217, 237, 277, 315, 582, 632
Hpy188III TCNNGA 2 cut(s) 334, 390
Hpy8I GTNNAC 2 cut(s) 337, 358
HpyAV CCTTC 1 cut(s) 922
HpyCH4III ACNGT 2 cut(s) 170, 685
HpyCH4V TGCA 3 cut(s) 288, 419, 475
HpyF3I CTNAG 5 cut(s) 42, 236, 314, 622, 709
Hsp92II CATG 3 cut(s) 332, 557, 764
KpnI GGTACC 1 cut(s) 923
Kzo9I GATC 5 cut(s) 31, 232, 277, 325, 736
LmnI GCTCC 3 cut(s) 217, 300, 485
LweI GCATC 1 cut(s) 722
MaeI CTAG 4 cut(s) 281, 561, 732, 952
MaeIII GTNAC 3 cut(s) 9, 224, 489
MalI GATC 5 cut(s) 33, 234, 279, 327, 738
MboI GATC 5 cut(s) 31, 232, 277, 325, 736
MboII GAAGA 3 cut(s) 335, 763, 766
MfeI CAATTG 1 cut(s) 810
MflI RGATCY 1 cut(s) 31
MhlI GDGCHC 2 cut(s) 71, 305
MmeI TCCRAC 3 cut(s) 859, 917, 932
MnlI CCTC 1 cut(s) 718
MroXI GAANNNNTTC 1 cut(s) 637
MseI TTAA 3 cut(s) 186, 435, 459
MspI CCGG 2 cut(s) 71, 179
MspR9I CCNGG 4 cut(s) 71, 72, 180, 917
MunI CAATTG 1 cut(s) 810
Mva1269I GAATGC 1 cut(s) 531
MvaI CCWGG 1 cut(s) 917
NciI CCSGG 3 cut(s) 71, 72, 180
NcoI CCATGG 1 cut(s) 760
NdeII GATC 5 cut(s) 31, 232, 277, 325, 736
NlaIII CATG 3 cut(s) 332, 557, 764
NlaIV GGNNCC 6 cut(s) 33, 481, 640, 729, 840, 921
NmuCI GTSAC 3 cut(s) 9, 224, 489
PceI AGGCCT 1 cut(s) 292
PctI GAATGC 1 cut(s) 531
PdmI GAANNNNTTC 1 cut(s) 637
PfeI GAWTC 4 cut(s) 212, 550, 868, 889
PflMI CCANNNNNTGG 2 cut(s) 369, 527
PshAI GACNNNNGTC 1 cut(s) 128
Psp6I CCWGG 1 cut(s) 915
PspGI CCWGG 1 cut(s) 915
PspN4I GGNNCC 6 cut(s) 33, 481, 640, 729, 840, 921
PspPI GGNCC 1 cut(s) 557
PstI CTGCAG 1 cut(s) 290
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 1 cut(s) 31
RsaI GTAC 2 cut(s) 851, 921
RsaNI GTAC 2 cut(s) 850, 920
SaqAI TTAA 3 cut(s) 186, 435, 459
Sau3AI GATC 5 cut(s) 31, 232, 277, 325, 736
Sau96I GGNCC 1 cut(s) 557
ScrFI CCNGG 4 cut(s) 71, 72, 180, 917
SduI GDGCHC 2 cut(s) 71, 305
SetI ASST 8 cut(s) 222, 489, 514, 562, 628, 660, 733, 844
SfaNI GCATC 1 cut(s) 722
SfcI CTRYAG 1 cut(s) 286
SinI GGWCC 1 cut(s) 557
SmaI CCCGGG 1 cut(s) 72
SseBI AGGCCT 1 cut(s) 292
SsiI CCGC 1 cut(s) 636
SspI AATATT 1 cut(s) 768
SspMI CTAG 4 cut(s) 281, 561, 732, 952
StuI AGGCCT 1 cut(s) 292
StyD4I CCNGG 4 cut(s) 69, 70, 178, 915
StyI CCWWGG 3 cut(s) 27, 483, 760
TaaI ACNGT 2 cut(s) 170, 685
TaqI TCGA 2 cut(s) 95, 693
TfiI GAWTC 4 cut(s) 212, 550, 868, 889
Tru1I TTAA 3 cut(s) 186, 435, 459
Tru9I TTAA 3 cut(s) 186, 435, 459
TscAI CASTG 2 cut(s) 18, 532
TseFI GTSAC 3 cut(s) 9, 224, 489
Tsp45I GTSAC 3 cut(s) 9, 224, 489
TspDTI ATGAA 4 cut(s) 258, 542, 599, 764
TspMI CCCGGG 1 cut(s) 70
TspRI CASTG 2 cut(s) 18, 532
Van91I CCANNNNNTGG 2 cut(s) 369, 527
VpaK11BI GGWCC 1 cut(s) 557
XapI RAATTY 2 cut(s) 564, 587
XmaI CCCGGG 1 cut(s) 70
XmiI GTMKAC 1 cut(s) 357
XmnI GAANNNNTTC 1 cut(s) 637
XspI CTAG 4 cut(s) 281, 561, 732, 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.