pycom01g10870

Possible catecholamine-binding domain present in a variety of eukaryotic proteins.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0013451
Physical Location & Seq
Reverse (-)
11659685 .. 11661469
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g10870.2

Sequence Viewer

Length: 1233 bp
ATGGTGAGCTTGGGGTCTTGGTCGGTTTTTGCTTCGAGGTTTGCTTTCAGGCTATGTATTCTGATCCTTGTCTTGGAGGCCAAGTTTGATGTTATGGCTGCTGATGGCAGTTATGTTCCGGGGGTTAATAGCGCTGGTGGGGGCAATGAAGCGTCGCAGCTTTGTGACAATGATCTGAGCAGTTTTATGCTACCACCATATAGTAATTCATCATCTGATCTAGTCTGCAGACCTCTTTGGAACACTTTTGTTTTGAGATACTCTCAGACAGAAGATCACGTCGTGAACATTATATTATCCGCTGTATACACTACAGGATGGGTAGGAATAGGATTTTCCAAAGATGGAATGATGGTTGGTTCAAGTGCAATAGTGGGATGGATTAACAAAAAAGGCGAAGCAAGAATTAAGCAATACTATTTGCAAGGCTCCAAGGTGTCACTAGTCATCCCAGACAAAGGTGAATTGCCACTCACTGGCATTCCTGCTTCTGTTGTGCTTCATGGACCTAGAATTTACTTGGCTTTTCAGATGAAATTCCAAGCTCATCTTGCTCGTCAGCCAATCATCTTGGCTATCGGAAGTGGTTACCCAAAGCACCACCACCTAACCATACACAACGATAAAACAACCGTCATGTTCGATTTCTCTGCAGGCTCCGCATCTGTGCGAGAGGCACCTAGTCATCTTGGGCAAATGAAGAAGAACCATGGAATATTGGCTATATTTGGATGGGGTCTAATAATTCCTATTGGGGCAATTGTGCCAAGATACTTGAAGCACAAGGAACCTTTGTGGTACTATCTCCATTCAATTATTCAATTTGTTGGATTTGTGATTGGGCTTGCAGCTGTGGTACTTGGCCAGAAACTCTATACTAAAATAGGAGCCAACTTTCCAACGCATAGAGGCATAGGGATTTTTGTTCTTGTACTTAGCATCCTTCAGATATTGGCATTTTTCCTAAGGCCCAACAAGGATGCCAAGAACATTAGAAAGTACTGGAATTGGTACCACCACTGGCTTGGAAGGTTTGCACTCTTCTTTGCAGCCGTGAACATAGTTCTGGGGATCAAGATTGGAGGTGAAGGAAATGACTGGAAGATTGGTTACGGATTTCTTCTCGGCGTAATTCTTGTCTCAGTAATTCTGTTAGAAGTATTGGCAAGGATGAGAAGAACAGAGAAGGATGATATTACTCCAAACTTCCAAATGAATCCAGTCCAATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cytochrom_B561 DOMON

Protein Analysis

411

Amino Acids

45.5

Weight (kDa)

9.6

Isoelectric Point (pI)

29.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013451)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61750 AT3G61750
fragaria_vesca FvH4_7g16430
malus_domestica MD01G1080600.v1.1 MD07G1149500.v1.1
prunus_persica Prupe.2G188200_v2.0.a1
pyrus_communis pycom01g10870 pycom07g14810
rosa_chinensis RchiOBHm_Chr1g0359441
rosa_laevigata RLG00000027869
rosa_multiflora Rmu_ssc0000358.1_g000010
rosa_roxburghii Rroxscaffold_4G00297000
rosa_rugosa Rorug01G0271400
rosa_samantha Rh1AG284700 Rh1BG250700 Rh1CG268800 Rh1DG279800
rosa_wichuraiana Rw1G025290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1011
AccB1I GGYRCC 2 cut(s) 676, 1011
AccB7I CCANNNNNTGG 1 cut(s) 476
AccI GTMKAC 1 cut(s) 306
AciI CCGC 2 cut(s) 300, 660
AclWI GGATC 2 cut(s) 58, 1079
AcoI YGGCCR 1 cut(s) 862
AcsI RAATTY 2 cut(s) 513, 536
AcuI CTGAAG 1 cut(s) 929
AdeI CACNNNGTG 1 cut(s) 283
AfaI GTAC 5 cut(s) 800, 858, 933, 1001, 1013
AfeI AGCGCT 1 cut(s) 133
AfiI CCNNNNNNNGG 3 cut(s) 73, 458, 476
AgsI TTSAA 4 cut(s) 363, 778, 813, 821
AhlI ACTAGT 1 cut(s) 442
AjiI CACGTC 1 cut(s) 280
AluBI AGCT 4 cut(s) 9, 160, 545, 851
AluI AGCT 4 cut(s) 9, 160, 545, 851
Alw26I GTCTC 1 cut(s) 1144
AlwI GGATC 2 cut(s) 58, 1079
Aor51HI AGCGCT 1 cut(s) 133
AoxI GGCC 3 cut(s) 78, 862, 968
ApeKI GCWGC 4 cut(s) 98, 157, 848, 1049
ApoI RAATTY 2 cut(s) 513, 536
Asp718I GGTACC 1 cut(s) 1011
AspLEI GCGC 1 cut(s) 134
AspS9I GGNCC 2 cut(s) 506, 969
AsuC2I CCSGG 1 cut(s) 120
AsuHPI GGTGA 3 cut(s) 16, 473, 1097
AvaII GGWCC 1 cut(s) 506
AxyI CCTNAGG 1 cut(s) 965
BalI TGGCCA 1 cut(s) 864
BanI GGYRCC 2 cut(s) 676, 1011
BarI GAAGNNNNNNTAC 2 cut(s) 1094, 1126
BbvI GCAGC 4 cut(s) 85, 169, 860, 1061
BccI CCATC 6 cut(s) 98, 312, 338, 346, 372, 726
BceAI ACGGC 1 cut(s) 1037
BcgI CGANNNNNNTGC 2 cut(s) 632, 666
BcnI CCSGG 1 cut(s) 120
BcoDI GTCTC 1 cut(s) 1144
BcuI ACTAGT 1 cut(s) 442
BfaI CTAG 4 cut(s) 221, 443, 510, 681
BfmI CTRYAG 3 cut(s) 226, 312, 651
BfoI RGCGCY 1 cut(s) 135
BisI GCNGC 4 cut(s) 99, 158, 849, 1050
BlsI GCNGC 4 cut(s) 100, 159, 850, 1051
BmcAI AGTACT 1 cut(s) 1001
Bme1390I CCNGG 1 cut(s) 120
Bme18I GGWCC 1 cut(s) 506
BmgBI CACGTC 1 cut(s) 280
BmgT120I GGNCC 2 cut(s) 506, 969
BmiI GGNNCC 6 cut(s) 430, 658, 678, 789, 889, 1013
BmrFI CCNGG 1 cut(s) 120
BmsI GCATC 3 cut(s) 671, 948, 970
BplI GAGNNNNNCTC 2 cut(s) 247, 279
BpuMI CCSGG 1 cut(s) 120
BsaJI CCNNGG 3 cut(s) 119, 432, 709
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 3 cut(s) 73, 458, 476
Bse1I ACTGG 5 cut(s) 481, 1007, 1025, 1103, 1220
Bse21I CCTNAGG 1 cut(s) 965
Bse3DI GCAATG 1 cut(s) 151
BseDI CCNNGG 3 cut(s) 119, 432, 709
BseGI GGATG 8 cut(s) 323, 383, 447, 737, 939, 985, 1176, 1195
BseLI CCNNNNNNNGG 3 cut(s) 73, 458, 476
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 3 cut(s) 167, 278, 1155
BseNI ACTGG 5 cut(s) 481, 1007, 1025, 1103, 1220
BseXI GCAGC 4 cut(s) 85, 169, 860, 1061
BshFI GGCC 3 cut(s) 80, 864, 970
BshNI GGYRCC 2 cut(s) 676, 1011
BsiSI CCGG 1 cut(s) 119
BslI CCNNNNNNNGG 3 cut(s) 73, 458, 476
BsmAI GTCTC 1 cut(s) 1144
BsmI GAATGC 1 cut(s) 480
BsnI GGCC 3 cut(s) 80, 864, 970
Bsp143I GATC 5 cut(s) 63, 172, 217, 274, 1071
Bsp19I CCATGG 1 cut(s) 709
BspACI CCGC 2 cut(s) 300, 660
BspANI GGCC 3 cut(s) 80, 864, 970
BspCNI CTCAG 3 cut(s) 168, 277, 1154
BspLI GGNNCC 6 cut(s) 430, 658, 678, 789, 889, 1013
BspMAI CTGCAG 2 cut(s) 230, 655
BspPI GGATC 2 cut(s) 58, 1079
BspT107I GGYRCC 2 cut(s) 676, 1011
BsrDI GCAATG 1 cut(s) 151
BsrI ACTGG 5 cut(s) 481, 1007, 1025, 1103, 1220
BssECI CCNNGG 3 cut(s) 119, 432, 709
BssMI GATC 5 cut(s) 63, 172, 217, 274, 1071
BssNAI GTATAC 1 cut(s) 307
BssT1I CCWWGG 2 cut(s) 432, 709
Bst1107I GTATAC 1 cut(s) 307
Bst4CI ACNGT 1 cut(s) 634
Bst6I CTCTTC 1 cut(s) 1046
BstC8I GCNNGC 2 cut(s) 655, 846
BstDEI CTNAG 5 cut(s) 176, 264, 935, 965, 1141
BstDSI CCRYGG 1 cut(s) 709
BstEII GGTNACC 1 cut(s) 587
BstF5I GGATG 8 cut(s) 323, 383, 447, 737, 939, 985, 1176, 1195
BstH2I RGCGCY 1 cut(s) 135
BstHHI GCGC 1 cut(s) 134
BstKTI GATC 5 cut(s) 66, 175, 220, 277, 1074
BstMAI GTCTC 1 cut(s) 1144
BstMBI GATC 5 cut(s) 63, 172, 217, 274, 1071
BstMWI GCNNNNNNNGC 2 cut(s) 551, 659
BstPI GGTNACC 1 cut(s) 587
BstSCI CCNGG 1 cut(s) 118
BstSFI CTRYAG 3 cut(s) 226, 312, 651
BstV1I GCAGC 4 cut(s) 85, 169, 860, 1061
BstXI CCANNNNNNTGG 1 cut(s) 1025
BstZ17I GTATAC 1 cut(s) 307
Bsu36I CCTNAGG 1 cut(s) 965
BsuRI GGCC 3 cut(s) 80, 864, 970
BtgI CCRYGG 1 cut(s) 709
BtrI CACGTC 1 cut(s) 280
BtsCI GGATG 8 cut(s) 323, 383, 447, 737, 939, 985, 1176, 1195
BtsIMutI CAGTG 2 cut(s) 474, 1018
Cac8I GCNNGC 2 cut(s) 655, 846
CfoI GCGC 1 cut(s) 134
Cfr13I GGNCC 2 cut(s) 506, 969
CseI GACGC 1 cut(s) 141
Csp6I GTAC 5 cut(s) 799, 857, 932, 1000, 1012
CviAII CATG 3 cut(s) 503, 637, 710
CviQI GTAC 5 cut(s) 799, 857, 932, 1000, 1012
DdeI CTNAG 5 cut(s) 176, 264, 935, 965, 1141
DpnI GATC 5 cut(s) 65, 174, 219, 276, 1073
DpnII GATC 5 cut(s) 63, 172, 217, 274, 1071
DraIII CACNNNGTG 1 cut(s) 283
EaeI YGGCCR 1 cut(s) 862
Eam1104I CTCTTC 1 cut(s) 1046
EarI CTCTTC 1 cut(s) 1046
Eco130I CCWWGG 2 cut(s) 432, 709
Eco47I GGWCC 1 cut(s) 506
Eco47III AGCGCT 1 cut(s) 133
Eco57I CTGAAG 1 cut(s) 929
Eco81I CCTNAGG 1 cut(s) 965
Eco91I GGTNACC 1 cut(s) 587
EcoO65I GGTNACC 1 cut(s) 587
EcoT14I CCWWGG 2 cut(s) 432, 709
ErhI CCWWGG 2 cut(s) 432, 709
FaeI CATG 3 cut(s) 506, 640, 713
FalI AAGNNNNNCTT 2 cut(s) 534, 566
FatI CATG 3 cut(s) 502, 636, 709
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 4 cut(s) 99, 158, 849, 1050
FokI GGATG 8 cut(s) 330, 390, 434, 744, 926, 992, 1183, 1202
Fsp4HI GCNGC 4 cut(s) 99, 158, 849, 1050
FspBI CTAG 4 cut(s) 221, 443, 510, 681
GlaI GCGC 1 cut(s) 133
GluI GCNGC 4 cut(s) 99, 158, 849, 1050
HaeII RGCGCY 1 cut(s) 135
HaeIII GGCC 3 cut(s) 80, 864, 970
HapII CCGG 1 cut(s) 119
HgaI GACGC 1 cut(s) 141
HhaI GCGC 1 cut(s) 134
Hin1II CATG 3 cut(s) 506, 640, 713
Hin6I GCGC 1 cut(s) 132
HinP1I GCGC 1 cut(s) 132
HinfI GANTC 1 cut(s) 1216
HpaII CCGG 1 cut(s) 119
HphI GGTGA 3 cut(s) 16, 473, 1097
Hpy166II GTNNAC 3 cut(s) 286, 307, 1057
Hpy188I TCNGA 7 cut(s) 63, 177, 217, 267, 531, 581, 948
Hpy188III TCNNGA 2 cut(s) 283, 1075
Hpy8I GTNNAC 3 cut(s) 286, 307, 1057
Hpy99I CGWCG 2 cut(s) 157, 284
HpyAV CCTTC 4 cut(s) 953, 1023, 1082, 1180
HpyCH4III ACNGT 1 cut(s) 634
HpyCH4IV ACGT 1 cut(s) 279
HpyCH4V TGCA 7 cut(s) 228, 368, 424, 653, 848, 1037, 1049
HpyF10VI GCNNNNNNNGC 2 cut(s) 551, 659
HpyF3I CTNAG 5 cut(s) 176, 264, 935, 965, 1141
HpySE526I ACGT 1 cut(s) 279
Hsp92II CATG 3 cut(s) 506, 640, 713
HspAI GCGC 1 cut(s) 132
KpnI GGTACC 1 cut(s) 1015
Kzo9I GATC 5 cut(s) 63, 172, 217, 274, 1071
LmnI GCTCC 3 cut(s) 434, 662, 887
Lsp1109I GCAGC 4 cut(s) 85, 169, 860, 1061
LweI GCATC 3 cut(s) 671, 948, 970
MaeI CTAG 4 cut(s) 221, 443, 510, 681
MaeII ACGT 1 cut(s) 279
MaeIII GTNAC 4 cut(s) 164, 438, 587, 1109
MalI GATC 5 cut(s) 65, 174, 219, 276, 1073
MboI GATC 5 cut(s) 63, 172, 217, 274, 1071
MboII GAAGA 7 cut(s) 284, 712, 715, 1033, 1112, 1114, 1188
MfeI CAATTG 1 cut(s) 759
MlsI TGGCCA 1 cut(s) 864
MluNI TGGCCA 1 cut(s) 864
MmeI TCCRAC 2 cut(s) 808, 923
MnlI CCTC 6 cut(s) 30, 70, 243, 667, 902, 1076
Mox20I TGGCCA 1 cut(s) 864
MscI TGGCCA 1 cut(s) 864
MseI TTAA 3 cut(s) 126, 384, 408
Msp20I TGGCCA 1 cut(s) 864
MspA1I CMGCKG 2 cut(s) 302, 851
MspI CCGG 1 cut(s) 119
MspR9I CCNGG 1 cut(s) 120
MunI CAATTG 1 cut(s) 759
Mva1269I GAATGC 1 cut(s) 480
MwoI GCNNNNNNNGC 2 cut(s) 551, 659
NciI CCSGG 1 cut(s) 120
NcoI CCATGG 1 cut(s) 709
NdeII GATC 5 cut(s) 63, 172, 217, 274, 1071
NlaIII CATG 3 cut(s) 506, 640, 713
NlaIV GGNNCC 6 cut(s) 430, 658, 678, 789, 889, 1013
NmeAIII GCCGAG 1 cut(s) 1104
NmuCI GTSAC 2 cut(s) 164, 438
PctI GAATGC 1 cut(s) 480
PfeI GAWTC 1 cut(s) 1216
PflMI CCANNNNNTGG 1 cut(s) 476
PkrI GCNGC 4 cut(s) 100, 159, 850, 1051
PspEI GGTNACC 1 cut(s) 587
PspN4I GGNNCC 6 cut(s) 430, 658, 678, 789, 889, 1013
PspPI GGNCC 2 cut(s) 506, 969
PstI CTGCAG 2 cut(s) 230, 655
PvuII CAGCTG 1 cut(s) 851
RsaI GTAC 5 cut(s) 800, 858, 933, 1001, 1013
RsaNI GTAC 5 cut(s) 799, 857, 932, 1000, 1012
SaqAI TTAA 3 cut(s) 126, 384, 408
SatI GCNGC 4 cut(s) 99, 158, 849, 1050
Sau3AI GATC 5 cut(s) 63, 172, 217, 274, 1071
Sau96I GGNCC 2 cut(s) 506, 969
ScaI AGTACT 1 cut(s) 1001
ScrFI CCNGG 1 cut(s) 120
SfaNI GCATC 3 cut(s) 671, 948, 970
SfcI CTRYAG 3 cut(s) 226, 312, 651
SinI GGWCC 1 cut(s) 506
SpeI ACTAGT 1 cut(s) 442
SsiI CCGC 2 cut(s) 300, 660
SspI AATATT 1 cut(s) 717
SspMI CTAG 4 cut(s) 221, 443, 510, 681
StyD4I CCNGG 1 cut(s) 118
StyI CCWWGG 2 cut(s) 432, 709
TaaI ACNGT 1 cut(s) 634
TaiI ACGT 1 cut(s) 282
TaqI TCGA 2 cut(s) 35, 642
TatI WGTACW 2 cut(s) 931, 999
TfiI GAWTC 1 cut(s) 1216
Tru1I TTAA 3 cut(s) 126, 384, 408
Tru9I TTAA 3 cut(s) 126, 384, 408
TscAI CASTG 2 cut(s) 481, 1025
TseFI GTSAC 2 cut(s) 164, 438
TseI GCWGC 4 cut(s) 98, 157, 848, 1049
Tsp45I GTSAC 2 cut(s) 164, 438
TspDTI ATGAA 6 cut(s) 162, 198, 491, 548, 713, 1229
TspGWI ACGGA 1 cut(s) 1128
TspRI CASTG 2 cut(s) 481, 1025
Van91I CCANNNNNTGG 1 cut(s) 476
VpaK11BI GGWCC 1 cut(s) 506
XapI RAATTY 2 cut(s) 513, 536
XcmI CCANNNNNNNNNTGG 1 cut(s) 1022
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 4 cut(s) 221, 443, 510, 681
ZrmI AGTACT 1 cut(s) 1001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.