Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0013451

Physical Location & Seq

Genomic Coordinates Reverse (-)

53357006 .. 53392019

Gene Structure 35014 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG268800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGTCATGGGGGCTATGAGGATGGAATGGTCTGCAGCATCTGCAACAAAAGCTTACTTTGATACCATCAAACTGTGCAATGATCGCAGAAGACAATGCGACTCAGTGAAGTTAACACAAGAGCCAGGGAGCAATGAATTCGTGTCAGCCTTGGCAGCAGGCATGAAAGCCAAGCTCATAGTGGAGGTGACATCAAGTGCTTCCCCATCAACAATTGCCTTAGCAGCTGCTGCAAAACACACCGGAGGCAAATTGGTTTGCATCCTTCCGGAGCCAGATCTAGCTGAATCGAAGAAAGTTATCAAAGACTCAGGCCTAAAAGACTTGGTAGAATTCAAGACAGGTGACCCTTTTGAGCTATTGACGAATTACGAGAACATTGATTTCTCTCTGGTTGATTGCAAGAATGATGAGTACACAGGGTTGCTGAAGTTGCTTGATGTTAATCCGAGAAAATCAGTGGTTGTGGCTACTAACTTGGTTGAGGAAAGAAAAGGATTCGAAGGACATGTGAAGGGAGTGAAGGAGGAGAGGGTTGTCGTGAGGTCTATGAAGCATCCCATTGGAAAAGGTATGGAGGTCACCATGATCGGAAAGGAAGATTGGGGCGGTGGAAGAGTTTCGAATGAAGCAGAAAAAAGAGGTGGTTTCAAGAAGAGGAATGGTAATAAGAGCAAATGGCTTGTCAAGGTTTTTGAAATGGTGAATTCGGGGACTTGGCTTTCGGTTTTGAGGTTATGTGCTCTTCTCCTTTTCTTGGAGGCCAAGGTTTTTGTTTTGGGTGGTGATGATAGTAATGTCCAGGGTGGTAATAGTATAGATGGGTCTGGTGGAGTATCAGAGATTTGTGTTAATGATCTGGCTAGTTTCATGCCACCACCATATGGTAATTCATCTGATATAGTCTGCAGGCCTATTTGGAACACTTTTGTTTTGAGGTACACCCAAACTGAAGATCATGTAATGAACATAATATTATCTGCTGTGTACACCACTGGGTGGGTAGGAATGGGATTTTCCAGAGATGGATTGATGGTTGGTTCAAGTGCCATAGTGGGATGGGTTAATAGAAAAGGCCATGCAAGAATTAAGCAATACTATTTGCAAGGTTCAAAGTCTTCGCGAGTTATACCAGACAAAGGTGAATTGCCACTTACTGGTATTCCTGCTACTGTTGTGCTTCATGGCCCTAGGATTTACTTGGCATTCCAGTTGAAATTCCAAGCTCATCTTTCTCGGCAACCTCTTATCTTGGCCGTTGGAAGCGGTTACCCCAAGCACAACAACCACTTAACAAAACACACCGATAAAACCACCATCAAGTTCGACTTCTCTGCAGGTTCTGCATCTGAGGCACCTAGTGATTTTGGGCAGATGAAGAAGAACCATGGAATATTGGCCATATTTGGATGGGGTATAATCATTCCTTTGGGGGCAATTGTTCCAAGATACTTCAAGCACAAGGACCCCTTGTGGTACTATCTCCATTCAATTATTCAATTTGTGGGATTTGTCATTGGCCTTGCAGCAGTGGTACTTGGACAAAAACTCTATAATAAAATAGACGCCAATTTCCAAACACATAGAGCAATTGGAATCTTTGTTCTTGTGCTTAGTATCCTTCAGATATTGGCATTCTTTCTGAGACCAAGCAAGGATGCCAAGATTAGAAAGTACTGGAATTGGTACCACCACTGGTTTGGAAGGTTTGCAATCTTCTTTGCAGCTGTGAACATTGTTCTGGGGATCAACATTGGAGCTGCAGGCATTGAATGGAAGATTAGTTATGGATTTTTTCTCAGCGTAATTCTTATCGCAGTCATTGTTTTAGAAGTTTTGGCAAGGATGAGGAGGACAGAAAATAAGAATATGCCTCCAAACTTCCAAATGAATCCGGTTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cytochrom_B561 DOMON

Protein Analysis

634

Amino Acids

70.22

Weight (kDa)

9.5

Isoelectric Point (pI)

27.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1442	PF07279	6 - 210	2.6e-26	Protein of unknown function (DUF1442)
DOMON	PF03351	313 - 376	1.1e-08	DOMON domain
Cytochrom_B561	PF03188	463 - 583	2.2e-07	Eukaryotic cytochrome b561

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61750 AT3G61750
fragaria_vesca	FvH4_7g16430
malus_domestica	MD01G1080600.v1.1 MD07G1149500.v1.1
prunus_persica	Prupe.2G188200_v2.0.a1
pyrus_communis	pycom01g10870 pycom07g14810
rosa_chinensis	RchiOBHm_Chr1g0359441
rosa_laevigata	RLG00000027869
rosa_multiflora	Rmu_ssc0000358.1_g000010
rosa_roxburghii	Rroxscaffold_4G00297000
rosa_rugosa	Rorug01G0271400
rosa_samantha	Rh1AG284700 Rh1BG250700 Rh1CG268800 Rh1DG279800
rosa_wichuraiana	Rw1G025290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1328
Acc65I	GGTACC	1 cut(s)	1686
AccB1I	GGYRCC	2 cut(s)	1354, 1686
AccB7I	CCANNNNNTGG	3 cut(s)	884, 999, 1157
AccII	CGCG	1 cut(s)	1123
AccIII	TCCGGA	1 cut(s)	268
AciI	CCGC	2 cut(s)	609, 1266
AclWI	GGATC	1 cut(s)	1754
AcoI	YGGCCR	2 cut(s)	1254, 1398
AcsI	RAATTY	4 cut(s)	137, 332, 706, 1217
AcuI	CTGAAG	3 cut(s)	449, 972, 1607
AcyI	GRCGYC	1 cut(s)	1566
AdeI	CACNNNGTG	2 cut(s)	999, 1361
AfaI	GTAC	7 cut(s)	416, 941, 989, 1478, 1536, 1676, 1688
AfiI	CCNNNNNNNGG	5 cut(s)	757, 884, 999, 1139, 1157
AflIII	ACRYGT	1 cut(s)	508
AjnI	CCWGG	2 cut(s)	124, 801
AjuI	GAANNNNNNNTTGG	2 cut(s)	586, 618
AloI	GAACNNNNNNTCC	2 cut(s)	1587, 1619
AluBI	AGCT	8 cut(s)	53, 175, 227, 284, 358, 1226, 1727, 1760
AluI	AGCT	8 cut(s)	53, 175, 227, 284, 358, 1226, 1727, 1760
Alw21I	GWGCWC	1 cut(s)	745
Alw26I	GTCTC	1 cut(s)	1639
AlwI	GGATC	1 cut(s)	1754
AlwNI	CAGNNNCTG	3 cut(s)	41, 230, 1343
Aor13HI	TCCGGA	1 cut(s)	268
AoxI	GGCC	8 cut(s)	313, 762, 911, 1075, 1186, 1254, 1398, 1519
ApeKI	GCWGC	8 cut(s)	35, 155, 224, 227, 230, 1526, 1724, 1760
ApoI	RAATTY	4 cut(s)	137, 332, 706, 1217
ArsI	GACNNNNNNTTYG	4 cut(s)	669, 701, 706, 738
Asp700I	GAANNNNTTC	1 cut(s)	619
Asp718I	GGTACC	1 cut(s)	1686
AspA2I	CCTAGG	1 cut(s)	1190
AspS9I	GGNCC	2 cut(s)	1187, 1465
AsuHPI	GGTGA	6 cut(s)	199, 356, 574, 715, 797, 1154
AsuII	TTCGAA	2 cut(s)	501, 623
AvaII	GGWCC	1 cut(s)	1465
AvrII	CCTAGG	1 cut(s)	1190
BalI	TGGCCA	1 cut(s)	1400
BanI	GGYRCC	2 cut(s)	1354, 1686
BbsI	GAAGAC	2 cut(s)	97, 1110
Bbv12I	GWGCWC	1 cut(s)	745
BbvI	GCAGC	8 cut(s)	47, 167, 214, 217, 236, 1538, 1736, 1747
BccI	CCATC	9 cut(s)	16, 74, 214, 815, 1019, 1027, 1053, 1325, 1404
BceAI	ACGGC	1 cut(s)	1241
BcgI	CGANNNNNNTGC	4 cut(s)	121, 155, 1316, 1350
BciT130I	CCWGG	2 cut(s)	126, 803
BciVI	GTATCC	1 cut(s)	1628
BcoDI	GTCTC	1 cut(s)	1639
BfaI	CTAG	4 cut(s)	281, 864, 1191, 1359
BfmI	CTRYAG	4 cut(s)	33, 907, 1335, 1761
BfuAI	ACCTGC	1 cut(s)	1328
BfuI	GTATCC	1 cut(s)	1628
BglII	AGATCT	1 cut(s)	277
BisI	GCNGC	8 cut(s)	36, 156, 225, 228, 231, 1527, 1725, 1761
BlnI	CCTAGG	1 cut(s)	1190
BlsI	GCNGC	8 cut(s)	37, 157, 226, 229, 232, 1528, 1726, 1762
BmcAI	AGTACT	1 cut(s)	1676
Bme1390I	CCNGG	2 cut(s)	126, 803
Bme18I	GGWCC	1 cut(s)	1465
BmgT120I	GGNCC	2 cut(s)	1187, 1465
BmiI	GGNNCC	5 cut(s)	273, 1356, 1467, 1688, 1899
BmrFI	CCNGG	2 cut(s)	126, 803
BmrI	ACTGGG	1 cut(s)	1005
BmsI	GCATC	5 cut(s)	47, 270, 565, 1355, 1648
BmuI	ACTGGG	1 cut(s)	1005
BpiI	GAAGAC	2 cut(s)	97, 1110
Bpu10I	CCTNAGC	1 cut(s)	220
Bpu14I	TTCGAA	2 cut(s)	501, 623
BsaBI	GATNNNNATC	1 cut(s)	444
BsaHI	GRCGYC	1 cut(s)	1566
BsaI	GGTCTC	1 cut(s)	1639
BsaJI	CCNNGG	6 cut(s)	125, 150, 765, 802, 1190, 1387
BsaWI	WCCGGW	3 cut(s)	242, 268, 1894
Bsc4I	CCNNNNNNNGG	5 cut(s)	757, 884, 999, 1139, 1157
Bse1I	ACTGG	5 cut(s)	1000, 1162, 1210, 1682, 1700
Bse3DI	GCAATG	2 cut(s)	85, 139
Bse8I	GATNNNNATC	1 cut(s)	444
BseAI	TCCGGA	1 cut(s)	268
BseBI	CCWGG	2 cut(s)	126, 803
BseDI	CCNNGG	6 cut(s)	125, 150, 765, 802, 1190, 1387
BseGI	GGATG	7 cut(s)	27, 261, 556, 1064, 1415, 1663, 1851
BseJI	GATNNNNATC	1 cut(s)	444
BseLI	CCNNNNNNNGG	5 cut(s)	757, 884, 999, 1139, 1157
BseMI	GCAATG	2 cut(s)	85, 139
BseMII	CTCAG	5 cut(s)	117, 324, 1341, 1634, 1813
BseNI	ACTGG	5 cut(s)	1000, 1162, 1210, 1682, 1700
BseRI	GAGGAG	2 cut(s)	542, 1864
BseXI	GCAGC	8 cut(s)	47, 167, 214, 217, 236, 1538, 1736, 1747
Bsh1236I	CGCG	1 cut(s)	1123
BshFI	GGCC	8 cut(s)	315, 764, 913, 1077, 1188, 1256, 1400, 1521
BshNI	GGYRCC	2 cut(s)	1354, 1686
BsiHKAI	GWGCWC	1 cut(s)	745
BsiSI	CCGG	3 cut(s)	243, 269, 1895
BslFI	GGGAC	1 cut(s)	727
BslI	CCNNNNNNNGG	5 cut(s)	757, 884, 999, 1139, 1157
BsmAI	GTCTC	1 cut(s)	1639
BsmFI	GGGAC	1 cut(s)	727
BsmI	GAATGC	2 cut(s)	1205, 1634
BsnI	GGCC	8 cut(s)	315, 764, 913, 1077, 1188, 1256, 1400, 1521
Bso31I	GGTCTC	1 cut(s)	1639
Bsp119I	TTCGAA	2 cut(s)	501, 623
Bsp1286I	GDGCHC	1 cut(s)	745
Bsp13I	TCCGGA	1 cut(s)	268
Bsp1407I	TGTACA	1 cut(s)	987
Bsp143I	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
Bsp19I	CCATGG	1 cut(s)	1387
Bsp68I	TCGCGA	1 cut(s)	1123
BspACI	CCGC	2 cut(s)	609, 1266
BspANI	GGCC	8 cut(s)	315, 764, 913, 1077, 1188, 1256, 1400, 1521
BspCNI	CTCAG	5 cut(s)	116, 323, 1342, 1635, 1812
BspEI	TCCGGA	1 cut(s)	268
BspFNI	CGCG	1 cut(s)	1123
BspLI	GGNNCC	5 cut(s)	273, 1356, 1467, 1688, 1899
BspMAI	CTGCAG	4 cut(s)	37, 911, 1339, 1765
BspMI	ACCTGC	1 cut(s)	1328
BspPI	GGATC	1 cut(s)	1754
BspQI	GCTCTTC	1 cut(s)	750
BspT104I	TTCGAA	2 cut(s)	501, 623
BspT107I	GGYRCC	2 cut(s)	1354, 1686
BspTNI	GGTCTC	1 cut(s)	1639
BsrDI	GCAATG	2 cut(s)	85, 139
BsrGI	TGTACA	1 cut(s)	987
BsrI	ACTGG	5 cut(s)	1000, 1162, 1210, 1682, 1700
BssECI	CCNNGG	6 cut(s)	125, 150, 765, 802, 1190, 1387
BssMI	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
BssNI	GRCGYC	1 cut(s)	1566
BssT1I	CCWWGG	4 cut(s)	150, 765, 1190, 1387
Bst2UI	CCWGG	2 cut(s)	126, 803
Bst4CI	ACNGT	2 cut(s)	75, 1174
Bst6I	CTCTTC	3 cut(s)	610, 650, 750
BstACI	GRCGYC	1 cut(s)	1566
BstAPI	GCANNNNNTGC	3 cut(s)	41, 230, 1343
BstAUI	TGTACA	1 cut(s)	987
BstBI	TTCGAA	2 cut(s)	501, 623
BstC8I	GCNNGC	3 cut(s)	160, 911, 1765
BstDEI	CTNAG	7 cut(s)	103, 220, 310, 1350, 1613, 1643, 1799
BstDSI	CCRYGG	1 cut(s)	1387
BstEII	GGTNACC	3 cut(s)	344, 580, 1268
BstF5I	GGATG	7 cut(s)	27, 261, 556, 1064, 1415, 1663, 1851
BstFNI	CGCG	1 cut(s)	1123
BstKTI	GATC	6 cut(s)	85, 280, 591, 859, 958, 1749
BstMAI	GTCTC	1 cut(s)	1639
BstMBI	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 50, 84, 155, 224, 230, 433, 1343, 1352
BstNI	CCWGG	2 cut(s)	126, 803
BstNSI	RCATGY	1 cut(s)	512
BstPI	GGTNACC	3 cut(s)	344, 580, 1268
BstSCI	CCNGG	2 cut(s)	124, 801
BstSFI	CTRYAG	4 cut(s)	33, 907, 1335, 1761
BstUI	CGCG	1 cut(s)	1123
BstV1I	GCAGC	8 cut(s)	47, 167, 214, 217, 236, 1538, 1736, 1747
BstV2I	GAAGAC	2 cut(s)	97, 1110
BstX2I	RGATCY	1 cut(s)	277
BstXI	CCANNNNNNTGG	1 cut(s)	1700
BstYI	RGATCY	1 cut(s)	277
BsuI	GTATCC	1 cut(s)	1628
BsuRI	GGCC	8 cut(s)	315, 764, 913, 1077, 1188, 1256, 1400, 1521
BtgI	CCRYGG	1 cut(s)	1387
BtsCI	GGATG	7 cut(s)	27, 261, 556, 1064, 1415, 1663, 1851
BtsI	GCAGTG	1 cut(s)	1536
BtsIMutI	CAGTG	5 cut(s)	111, 465, 993, 1536, 1693
BtuMI	TCGCGA	1 cut(s)	1123
BveI	ACCTGC	1 cut(s)	1328
Cac8I	GCNNGC	3 cut(s)	160, 911, 1765
CaiI	CAGNNNCTG	3 cut(s)	41, 230, 1343
Cfr13I	GGNCC	2 cut(s)	1187, 1465
CseI	GACGC	1 cut(s)	1574
Csp6I	GTAC	7 cut(s)	415, 940, 988, 1477, 1535, 1675, 1687
CviAII	CATG	9 cut(s)	7, 163, 509, 586, 871, 959, 1079, 1184, 1388
CviQI	GTAC	7 cut(s)	415, 940, 988, 1477, 1535, 1675, 1687
DdeI	CTNAG	7 cut(s)	103, 220, 310, 1350, 1613, 1643, 1799
DpnI	GATC	6 cut(s)	84, 279, 590, 858, 957, 1748
DpnII	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
DraIII	CACNNNGTG	2 cut(s)	999, 1361
EaeI	YGGCCR	2 cut(s)	1254, 1398
Eam1104I	CTCTTC	3 cut(s)	610, 650, 750
EarI	CTCTTC	3 cut(s)	610, 650, 750
Eco130I	CCWWGG	4 cut(s)	150, 765, 1190, 1387
Eco147I	AGGCCT	2 cut(s)	315, 913
Eco31I	GGTCTC	1 cut(s)	1639
Eco47I	GGWCC	1 cut(s)	1465
Eco57I	CTGAAG	3 cut(s)	449, 972, 1607
Eco91I	GGTNACC	3 cut(s)	344, 580, 1268
EcoO109I	RGGNCCY	1 cut(s)	1465
EcoO65I	GGTNACC	3 cut(s)	344, 580, 1268
EcoRI	GAATTC	3 cut(s)	137, 332, 706
EcoRII	CCWGG	2 cut(s)	124, 801
EcoT14I	CCWWGG	4 cut(s)	150, 765, 1190, 1387
ErhI	CCWWGG	4 cut(s)	150, 765, 1190, 1387
FaeI	CATG	9 cut(s)	10, 166, 512, 589, 874, 962, 1082, 1187, 1391
FalI	AAGNNNNNCTT	6 cut(s)	1215, 1247, 1313, 1345, 1454, 1486
FaqI	GGGAC	1 cut(s)	727
FatI	CATG	9 cut(s)	6, 162, 508, 585, 870, 958, 1078, 1183, 1387
FauNDI	CATATG	1 cut(s)	883
Fnu4HI	GCNGC	8 cut(s)	36, 156, 225, 228, 231, 1527, 1725, 1761
FokI	GGATG	7 cut(s)	34, 248, 543, 1071, 1422, 1670, 1858
Fsp4HI	GCNGC	8 cut(s)	36, 156, 225, 228, 231, 1527, 1725, 1761
FspBI	CTAG	4 cut(s)	281, 864, 1191, 1359
GluI	GCNGC	8 cut(s)	36, 156, 225, 228, 231, 1527, 1725, 1761
HaeIII	GGCC	8 cut(s)	315, 764, 913, 1077, 1188, 1256, 1400, 1521
HapII	CCGG	3 cut(s)	243, 269, 1895
HgaI	GACGC	1 cut(s)	1574
Hin1I	GRCGYC	1 cut(s)	1566
Hin1II	CATG	9 cut(s)	10, 166, 512, 589, 874, 962, 1082, 1187, 1391
HincII	GTYRAC	1 cut(s)	114
HindII	GTYRAC	1 cut(s)	114
HindIII	AAGCTT	1 cut(s)	51
HinfI	GANTC	6 cut(s)	101, 287, 308, 498, 1596, 1891
HpaI	GTTAAC	1 cut(s)	114
HpaII	CCGG	3 cut(s)	243, 269, 1895
HphI	GGTGA	6 cut(s)	199, 356, 574, 715, 797, 1154
Hpy166II	GTNNAC	6 cut(s)	114, 417, 942, 988, 990, 1732
Hpy188I	TCNGA	7 cut(s)	450, 593, 841, 898, 1351, 1626, 1644
Hpy188III	TCNNGA	6 cut(s)	269, 337, 541, 652, 1020, 1122
Hpy8I	GTNNAC	6 cut(s)	114, 417, 942, 988, 990, 1732
HpyAV	CCTTC	6 cut(s)	275, 497, 508, 517, 1631, 1698
HpyCH4III	ACNGT	2 cut(s)	75, 1174
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 50, 84, 155, 224, 230, 433, 1343, 1352
HpyF3I	CTNAG	7 cut(s)	103, 220, 310, 1350, 1613, 1643, 1799
Hsp92I	GRCGYC	1 cut(s)	1566
Hsp92II	CATG	9 cut(s)	10, 166, 512, 589, 874, 962, 1082, 1187, 1391
Kpn2I	TCCGGA	1 cut(s)	268
KpnI	GGTACC	1 cut(s)	1690
KspAI	GTTAAC	1 cut(s)	114
Kzo9I	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
LguI	GCTCTTC	1 cut(s)	750
LmnI	GCTCC	3 cut(s)	129, 271, 1757
Lsp1109I	GCAGC	8 cut(s)	47, 167, 214, 217, 236, 1538, 1736, 1747
LweI	GCATC	5 cut(s)	47, 270, 565, 1355, 1648
MaeI	CTAG	4 cut(s)	281, 864, 1191, 1359
MaeIII	GTNAC	4 cut(s)	187, 344, 580, 1268
MalI	GATC	6 cut(s)	84, 279, 590, 858, 957, 1748
MboI	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
MfeI	CAATTG	3 cut(s)	213, 1437, 1590
MflI	RGATCY	1 cut(s)	277
MhlI	GDGCHC	1 cut(s)	745
MlsI	TGGCCA	1 cut(s)	1400
MluNI	TGGCCA	1 cut(s)	1400
MlyI	GAGTC	2 cut(s)	95, 302
MmeI	TCCRAC	1 cut(s)	1240
Mox20I	TGGCCA	1 cut(s)	1400
MroI	TCCGGA	1 cut(s)	268
MroXI	GAANNNNTTC	1 cut(s)	619
MscI	TGGCCA	1 cut(s)	1400
MseI	TTAA	6 cut(s)	113, 444, 852, 1065, 1089, 1292
Msp20I	TGGCCA	1 cut(s)	1400
MspA1I	CMGCKG	2 cut(s)	227, 1727
MspI	CCGG	3 cut(s)	243, 269, 1895
MspR9I	CCNGG	2 cut(s)	126, 803
MunI	CAATTG	3 cut(s)	213, 1437, 1590
Mva1269I	GAATGC	2 cut(s)	1205, 1634
MvaI	CCWGG	2 cut(s)	126, 803
MvnI	CGCG	1 cut(s)	1123
MwoI	GCNNNNNNNGC	9 cut(s)	41, 50, 84, 155, 224, 230, 433, 1343, 1352
NcoI	CCATGG	1 cut(s)	1387
NdeI	CATATG	1 cut(s)	883
NdeII	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
NlaIII	CATG	9 cut(s)	10, 166, 512, 589, 874, 962, 1082, 1187, 1391
NlaIV	GGNNCC	5 cut(s)	273, 1356, 1467, 1688, 1899
NmeAIII	GCCGAG	1 cut(s)	1216
NmuCI	GTSAC	3 cut(s)	187, 344, 580
NruI	TCGCGA	1 cut(s)	1123
NspI	RCATGY	1 cut(s)	512
NspV	TTCGAA	2 cut(s)	501, 623
PceI	AGGCCT	2 cut(s)	315, 913
PciI	ACATGT	1 cut(s)	508
PciSI	GCTCTTC	1 cut(s)	750
PctI	GAATGC	2 cut(s)	1205, 1634
PdmI	GAANNNNTTC	1 cut(s)	619
PfeI	GAWTC	4 cut(s)	287, 498, 1596, 1891
PflMI	CCANNNNNTGG	3 cut(s)	884, 999, 1157
PkrI	GCNGC	8 cut(s)	37, 157, 226, 229, 232, 1528, 1726, 1762
PleI	GAGTC	2 cut(s)	95, 302
PpsI	GAGTC	2 cut(s)	95, 302
PpuMI	RGGWCCY	1 cut(s)	1465
PscI	ACATGT	1 cut(s)	508
Psp5II	RGGWCCY	1 cut(s)	1465
Psp6I	CCWGG	2 cut(s)	124, 801
PspEI	GGTNACC	3 cut(s)	344, 580, 1268
PspGI	CCWGG	2 cut(s)	124, 801
PspN4I	GGNNCC	5 cut(s)	273, 1356, 1467, 1688, 1899
PspPI	GGNCC	2 cut(s)	1187, 1465
PspPPI	RGGWCCY	1 cut(s)	1465
PstI	CTGCAG	4 cut(s)	37, 911, 1339, 1765
PstNI	CAGNNNCTG	3 cut(s)	41, 230, 1343
PsuI	RGATCY	1 cut(s)	277
PvuII	CAGCTG	2 cut(s)	227, 1727
RruI	TCGCGA	1 cut(s)	1123
RsaI	GTAC	7 cut(s)	416, 941, 989, 1478, 1536, 1676, 1688
RsaNI	GTAC	7 cut(s)	415, 940, 988, 1477, 1535, 1675, 1687
SapI	GCTCTTC	1 cut(s)	750
SaqAI	TTAA	6 cut(s)	113, 444, 852, 1065, 1089, 1292
SatI	GCNGC	8 cut(s)	36, 156, 225, 228, 231, 1527, 1725, 1761
Sau3AI	GATC	6 cut(s)	82, 277, 588, 856, 955, 1746
Sau96I	GGNCC	2 cut(s)	1187, 1465
ScaI	AGTACT	1 cut(s)	1676
SchI	GAGTC	2 cut(s)	95, 302
ScrFI	CCNGG	2 cut(s)	126, 803
SduI	GDGCHC	1 cut(s)	745
SfaNI	GCATC	5 cut(s)	47, 270, 565, 1355, 1648
SfcI	CTRYAG	4 cut(s)	33, 907, 1335, 1761
SfuI	TTCGAA	2 cut(s)	501, 623
SinI	GGWCC	1 cut(s)	1465
SseBI	AGGCCT	2 cut(s)	315, 913
SsiI	CCGC	2 cut(s)	609, 1266
SspI	AATATT	2 cut(s)	975, 1395
SspMI	CTAG	4 cut(s)	281, 864, 1191, 1359
StuI	AGGCCT	2 cut(s)	315, 913
StyD4I	CCNGG	2 cut(s)	124, 801
StyI	CCWWGG	4 cut(s)	150, 765, 1190, 1387
TaaI	ACNGT	2 cut(s)	75, 1174
TaqI	TCGA	4 cut(s)	290, 501, 623, 1326
TatI	WGTACW	3 cut(s)	414, 987, 1674
TfiI	GAWTC	4 cut(s)	287, 498, 1596, 1891
Tru1I	TTAA	6 cut(s)	113, 444, 852, 1065, 1089, 1292
Tru9I	TTAA	6 cut(s)	113, 444, 852, 1065, 1089, 1292
TscAI	CASTG	5 cut(s)	111, 465, 1000, 1536, 1700
TseFI	GTSAC	3 cut(s)	187, 344, 580
TseI	GCWGC	8 cut(s)	35, 155, 224, 227, 230, 1526, 1724, 1760
Tsp45I	GTSAC	3 cut(s)	187, 344, 580
TspRI	CASTG	5 cut(s)	111, 465, 1000, 1536, 1700
Van91I	CCANNNNNTGG	3 cut(s)	884, 999, 1157
VpaK11BI	GGWCC	1 cut(s)	1465
XapI	RAATTY	4 cut(s)	137, 332, 706, 1217
XceI	RCATGY	1 cut(s)	512
XcmI	CCANNNNNNNNNTGG	2 cut(s)	178, 1697
XmaJI	CCTAGG	1 cut(s)	1190
XmnI	GAANNNNTTC	1 cut(s)	619
XspI	CTAG	4 cut(s)	281, 864, 1191, 1359
ZrmI	AGTACT	1 cut(s)	1676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.