Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0006016

Physical Location & Seq

Genomic Coordinates Forward (+)

14387387 .. 14398926

Gene Structure 11540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g16840.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGCGCACAGTCAGTGTGACTCTTCATCTGTTTCTCGTGGTGGTGATACAGGTTATGGAAGTGCTTTGTATACAGAGCTATGGAAGTTATGTGCAGGGCCTCTTGTGGATGTGCCCAGAATTGGAGAGAGAGTCTTCTACTTTCCTCAGGGCCATATGGAACAACTGGAAGCATCAACAAATCAAGAACTGAATCCGCAAATCCCTCGGTTCAATATACCGTCTAAGATCCTTTGTCAAGTTGTTAACATTCAATTACTGCCAGAACGAGACACCGATGAAGTTTATGCTCAGATCACTTTGCTCCCAGAACCAGATCAAAGTGAACCTACAAGTCCCGATCCATGTGTACCGGAGCCTCCAACACCGGCTACTTATTCCTTTTGCAAGATTTTGACAGCTTCTGATACAAGCACCCATGGAGGGTTCTCAGTTCTTCGAAAGCATGCTAATGATTGCTTACCTCCTTTGGATATGAACCAGGCAACTCCAACTCAGGAATTGGCTGCCAAAGATCTTCATGGCTATGAGTGGAAATTTAAGCATATCTTCAGAGGTCAACCGCGGAGGCATTTACTTACCACAGGATGGAGTACATTTGTCACATCCAAAAGATTGGTTGCTGGTGATGCGTTTGTGTTCTTGAGGGGTGGTAATGGGGAACTAGGGGTTGGGGTTCGGCGTCTTGCTCGTCAACAGACTCCCATGCCTTCATCAGTGATATCTAGCCAGAGCATGCATCTAGGAGTGCTTGCAACTGCTTCTCATGCCGTCATGACCTCAACTCTATTTGTTGTCTATTACAAGCCCAGGACGAGCCAATTTATTGTTGGCTTAAACAAATATCTTGAAGCCATCAACAATAAATTTTCTGTTGGCATGCGCTTTAAAATGCGATTTGAGGGGGAAGACTCACCGGAAAGAAGATTCACTGGCACTATAGTAGGGGTTGGGGATTTATCTCCTCACTGGGCAGAATCTAAATGGCGATCTCTGAAGGTTCAATGGGATGAACATGCCACAGTACCAAGGCCGGATAGGGTTTCTCCTTGGGAAATAGAGCCATTTGTAGCTTCTGTTCCGTTAAATCTTGCTCAACCAGTAGTAAAGAGCAAAAGGCCTAAAACCGTTGAAATTGCTTCATCAGGGTCAAACCAGTCTGCTGAGCCAACTCAATTAGGCTGTGTTGCTGAAGTCCAAAGCTGTGGTAGCCAGGTTGTCTGGCCCCCAAGGCAGAAAGACAGCAATGGCAGCGGCTACTCTAGCTCAAGGATCTGTGCAGAGGGTATCTGGCCTTCTTCTCCAAATGTGAATGTTTCTTTAAGCCTGTTTGCAGACTCACAAGAAGGCAACAAGAATGCTACTATGGGGTCCATGCTCCCTAACTTCTCCTCCCCATCTTCGAAAACAAGCAATGGCCCGGTGCATGACCAGCTGGAAACAGGGAAAAAGTTCGAGTCTTCAGGTTTTCGGTTGTTTGGTTATGATGTGCCAAAGGCAATTACTGCCAATCTTCGGGAGAAAGAGCCAATGTTTACAACAGTTTGCTCTGGTGCCAAAGGACCGATTCTGGCTGCTGCATCAGAACTTGATCAGGACCCCAATATTTCAAGAATCTCAAAAGAACAGATGCAACTTATATCAGAGGTACCACCAATTGAGACACAAAGCAAGCAGGGATCCACTGTTTCAATGAGATCTCGTACTAAGGTGCATATGGAAGGGGTTGCTGTTGGTCGTGCTGTGGACTTGACTGCATTAAAGGGGTATGATGATTTAATTGACGAGCTAGAGAAAATGTTTGAGATCAAAGGAGAGCTTCGTCCAGCAAACAAATGGGCAGTTGTTTTTACTGATGATGAAAATGACATGATGCTTCTTGGCGATTATCAATGGCAGGACTTTTGCCGGACTGTGAAGAAGATATTCATCTTTTCAAGTGATCACGTACAGATGCTAAGACAAGGCAAGCTAAAAAGTTCGGCATTACTGTGTGAGGAGAATGTCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

671

Amino Acids

74.05

Weight (kDa)

6.43

Isoelectric Point (pI)

48.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	128 - 228	2.4e-21	B3 DNA binding domain
BRWD_AD	PF25313	255 - 356	3.2e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	275 - 356	1.1e-36	Auxin response factor ancillary domain
AUX_IAA	PF02309	557 - 646	6.8e-09	AUX/IAA family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46530 AT2G46530 AT2G46530 AT3G61830 AT3G61830
fragaria_vesca	FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840
malus_domestica	MD01G1083400.v1.1 MD07G1152100.v1.1
prunus_persica	Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1
pyrus_communis	pycom07g15010
rosa_chinensis	RchiOBHm_Chr1g0360041
rosa_laevigata	RLG00000027836
rosa_multiflora	Rmu_ssc0000368.1_g000035
rosa_roxburghii	Rroxscaffold_4G00296430
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288600 Rh1BG254100 Rh1CG271600 Rh1DG283200
rosa_wichuraiana	Rw1G025590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1648
AccB1I	GGYRCC	2 cut(s)	1553, 1648
AccB7I	CCANNNNNTGG	1 cut(s)	588
AccI	GTMKAC	1 cut(s)	71
AccII	CGCG	1 cut(s)	565
AciI	CCGC	4 cut(s)	197, 563, 565, 1254
AclWI	GGATC	5 cut(s)	223, 335, 1280, 1674, 1687
AcsI	RAATTY	2 cut(s)	536, 866
AcuI	CTGAAG	4 cut(s)	535, 1016, 1212, 1446
AcyI	GRCGYC	1 cut(s)	682
AfaI	GTAC	6 cut(s)	351, 595, 1026, 1650, 1705, 1950
AfiI	CCNNNNNNNGG	4 cut(s)	122, 423, 588, 1515
AgsI	TTSAA	8 cut(s)	214, 254, 851, 1004, 1133, 1611, 1692, 1938
AjnI	CCWGG	3 cut(s)	480, 809, 1212
AjuI	GAANNNNNNNTTGG	2 cut(s)	654, 686
AluBI	AGCT	9 cut(s)	79, 401, 1073, 1203, 1266, 1435, 1789, 1819, 1972
AluI	AGCT	9 cut(s)	79, 401, 1073, 1203, 1266, 1435, 1789, 1819, 1972
Alw26I	GTCTC	2 cut(s)	264, 1655
AlwI	GGATC	5 cut(s)	223, 335, 1280, 1674, 1687
AlwNI	CAGNNNCTG	1 cut(s)	404
AoxI	GGCC	7 cut(s)	98, 151, 1031, 1118, 1223, 1292, 1417
ApeKI	GCWGC	4 cut(s)	506, 1251, 1574, 1577
ApoI	RAATTY	2 cut(s)	536, 866
Asp700I	GAANNNNTTC	2 cut(s)	1451, 1925
Asp718I	GGTACC	1 cut(s)	1648
AspLEI	GCGC	2 cut(s)	7, 885
AspS9I	GGNCC	7 cut(s)	98, 151, 1224, 1371, 1418, 1562, 1597
AsuC2I	CCSGG	1 cut(s)	1421
AsuHPI	GGTGA	3 cut(s)	56, 638, 906
AsuII	TTCGAA	2 cut(s)	439, 1403
AvaII	GGWCC	3 cut(s)	1371, 1562, 1597
AxyI	CCTNAGG	1 cut(s)	147
BaeGI	GKGCMC	1 cut(s)	117
BamHI	GGATCC	1 cut(s)	1679
BanI	GGYRCC	2 cut(s)	1553, 1648
BarI	GAAGNNNNNNTAC	2 cut(s)	1279, 1311
BauI	CACGAG	1 cut(s)	36
BbsI	GAAGAC	3 cut(s)	127, 915, 1452
BbvI	GCAGC	4 cut(s)	493, 1263, 1561, 1564
BccI	CCATC	3 cut(s)	582, 863, 1405
BceAI	ACGGC	1 cut(s)	755
BcgI	CGANNNNNNTGC	2 cut(s)	188, 222
BciT130I	CCWGG	3 cut(s)	482, 811, 1214
BclI	TGATCA	2 cut(s)	1591, 1942
BcnI	CCSGG	1 cut(s)	1421
BcoDI	GTCTC	2 cut(s)	264, 1655
BfaI	CTAG	5 cut(s)	665, 726, 743, 1263, 1790
BfmI	CTRYAG	1 cut(s)	939
BglI	GCCNNNNNGGC	1 cut(s)	1231
BglII	AGATCT	2 cut(s)	514, 1697
BisI	GCNGC	5 cut(s)	507, 1252, 1255, 1575, 1578
BlpI	GCTNAGC	1 cut(s)	1164
BlsI	GCNGC	5 cut(s)	508, 1253, 1256, 1576, 1579
Bme1390I	CCNGG	4 cut(s)	482, 811, 1214, 1421
Bme18I	GGWCC	3 cut(s)	1371, 1562, 1597
BmgT120I	GGNCC	7 cut(s)	98, 151, 1224, 1371, 1418, 1562, 1597
BmiI	GGNNCC	7 cut(s)	357, 1226, 1372, 1555, 1599, 1650, 1681
BmrFI	CCNGG	4 cut(s)	482, 811, 1214, 1421
BmrI	ACTGGG	1 cut(s)	979
BmsI	GCATC	7 cut(s)	182, 619, 748, 1589, 1620, 1863, 1944
BmuI	ACTGGG	1 cut(s)	979
BpiI	GAAGAC	3 cut(s)	127, 915, 1452
Bpu1102I	GCTNAGC	1 cut(s)	1164
Bpu14I	TTCGAA	2 cut(s)	439, 1403
BpuEI	CTTGAG	2 cut(s)	664, 1252
BpuMI	CCSGG	1 cut(s)	1421
BsaAI	YACGTR	1 cut(s)	1948
BsaBI	GATNNNNATC	1 cut(s)	1928
BsaHI	GRCGYC	1 cut(s)	682
BsaJI	CCNNGG	7 cut(s)	206, 418, 563, 809, 1028, 1049, 1229
BsaWI	WCCGGW	2 cut(s)	352, 916
BsaXI	ACNNNNNCTCC	4 cut(s)	117, 147, 1376, 1406
Bsc4I	CCNNNNNNNGG	4 cut(s)	122, 423, 588, 1515
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	5 cut(s)	171, 937, 974, 1100, 1156
Bse21I	CCTNAGG	1 cut(s)	147
Bse3DI	GCAATG	2 cut(s)	1252, 1420
Bse8I	GATNNNNATC	1 cut(s)	1928
BseBI	CCWGG	3 cut(s)	482, 811, 1214
BseDI	CCNNGG	7 cut(s)	206, 418, 563, 809, 1028, 1049, 1229
BseGI	GGATG	4 cut(s)	115, 593, 605, 1015
BseJI	GATNNNNATC	1 cut(s)	1928
BseLI	CCNNNNNNNGG	4 cut(s)	122, 423, 588, 1515
BseMI	GCAATG	2 cut(s)	1252, 1420
BseMII	CTCAG	5 cut(s)	161, 305, 444, 509, 1155
BseNI	ACTGG	5 cut(s)	171, 937, 974, 1100, 1156
BseRI	GAGGAG	3 cut(s)	954, 1381, 2012
BseSI	GKGCMC	1 cut(s)	117
BseXI	GCAGC	4 cut(s)	493, 1263, 1561, 1564
BsgI	GTGCAG	2 cut(s)	114, 1299
Bsh1236I	CGCG	1 cut(s)	565
BshFI	GGCC	7 cut(s)	100, 153, 1033, 1120, 1225, 1294, 1419
BshNI	GGYRCC	2 cut(s)	1553, 1648
BsiSI	CCGG	6 cut(s)	353, 368, 917, 1034, 1421, 1909
BslFI	GGGAC	1 cut(s)	321
BslI	CCNNNNNNNGG	4 cut(s)	122, 423, 588, 1515
BsmAI	GTCTC	2 cut(s)	264, 1655
BsmFI	GGGAC	1 cut(s)	321
BsmI	GAATGC	1 cut(s)	1363
BsnI	GGCC	7 cut(s)	100, 153, 1033, 1120, 1225, 1294, 1419
Bsp119I	TTCGAA	2 cut(s)	439, 1403
Bsp1286I	GDGCHC	1 cut(s)	117
Bsp1720I	GCTNAGC	1 cut(s)	1164
Bsp19I	CCATGG	1 cut(s)	418
BspACI	CCGC	4 cut(s)	197, 563, 565, 1254
BspANI	GGCC	7 cut(s)	100, 153, 1033, 1120, 1225, 1294, 1419
BspCNI	CTCAG	5 cut(s)	160, 304, 443, 508, 1156
BspFNI	CGCG	1 cut(s)	565
BspHI	TCATGA	1 cut(s)	774
BspLI	GGNNCC	7 cut(s)	357, 1226, 1372, 1555, 1599, 1650, 1681
BspPI	GGATC	5 cut(s)	223, 335, 1280, 1674, 1687
BspT104I	TTCGAA	2 cut(s)	439, 1403
BspT107I	GGYRCC	2 cut(s)	1553, 1648
BsrDI	GCAATG	2 cut(s)	1252, 1420
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	5 cut(s)	171, 937, 974, 1100, 1156
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	7 cut(s)	206, 418, 563, 809, 1028, 1049, 1229
BssNAI	GTATAC	1 cut(s)	72
BssNI	GRCGYC	1 cut(s)	682
BssSI	CACGAG	1 cut(s)	36
BssT1I	CCWWGG	4 cut(s)	418, 1028, 1049, 1229
Bst1107I	GTATAC	1 cut(s)	72
Bst2BI	CACGAG	1 cut(s)	36
Bst2UI	CCWGG	3 cut(s)	482, 811, 1214
Bst4CI	ACNGT	8 cut(s)	11, 222, 1024, 1129, 1543, 1687, 1915, 1992
Bst6I	CTCTTC	1 cut(s)	28
BstACI	GRCGYC	1 cut(s)	682
BstAPI	GCANNNNNTGC	1 cut(s)	1505
BstBAI	YACGTR	1 cut(s)	1948
BstBI	TTCGAA	2 cut(s)	439, 1403
BstC8I	GCNNGC	6 cut(s)	447, 737, 753, 881, 1673, 1970
BstDEI	CTNAG	8 cut(s)	147, 225, 291, 430, 495, 1164, 1707, 1958
BstDSI	CCRYGG	2 cut(s)	418, 563
BstF5I	GGATG	4 cut(s)	115, 593, 605, 1015
BstFNI	CGCG	1 cut(s)	565
BstHHI	GCGC	2 cut(s)	7, 885
BstMAI	GTCTC	2 cut(s)	264, 1655
BstMWI	GCNNNNNNNGC	8 cut(s)	629, 767, 1209, 1231, 1251, 1263, 1432, 1505
BstNI	CCWGG	3 cut(s)	482, 811, 1214
BstNSI	RCATGY	4 cut(s)	449, 739, 883, 1019
BstSCI	CCNGG	4 cut(s)	480, 809, 1212, 1419
BstSFI	CTRYAG	1 cut(s)	939
BstSLI	GKGCMC	1 cut(s)	117
BstUI	CGCG	1 cut(s)	565
BstV1I	GCAGC	4 cut(s)	493, 1263, 1561, 1564
BstV2I	GAAGAC	3 cut(s)	127, 915, 1452
BstX2I	RGATCY	5 cut(s)	228, 514, 1272, 1679, 1697
BstXI	CCANNNNNNTGG	2 cut(s)	616, 1205
BstYI	RGATCY	5 cut(s)	228, 514, 1272, 1679, 1697
BstZ17I	GTATAC	1 cut(s)	72
Bsu36I	CCTNAGG	1 cut(s)	147
BsuRI	GGCC	7 cut(s)	100, 153, 1033, 1120, 1225, 1294, 1419
BtgI	CCRYGG	2 cut(s)	418, 563
BtsCI	GGATG	4 cut(s)	115, 593, 605, 1015
BtsIMutI	CAGTG	5 cut(s)	20, 723, 930, 967, 1683
Cac8I	GCNNGC	6 cut(s)	447, 737, 753, 881, 1673, 1970
CaiI	CAGNNNCTG	1 cut(s)	404
CciI	TCATGA	1 cut(s)	774
CfoI	GCGC	2 cut(s)	7, 885
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	7 cut(s)	98, 151, 1224, 1371, 1418, 1562, 1597
Cfr42I	CCGCGG	1 cut(s)	566
CseI	GACGC	1 cut(s)	671
Csp6I	GTAC	6 cut(s)	350, 594, 1025, 1649, 1704, 1949
CviQI	GTAC	6 cut(s)	350, 594, 1025, 1649, 1704, 1949
DdeI	CTNAG	8 cut(s)	147, 225, 291, 430, 495, 1164, 1707, 1958
DraI	TTTAAA	1 cut(s)	889
Eam1104I	CTCTTC	1 cut(s)	28
EarI	CTCTTC	1 cut(s)	28
Eco130I	CCWWGG	4 cut(s)	418, 1028, 1049, 1229
Eco147I	AGGCCT	1 cut(s)	1120
Eco32I	GATATC	1 cut(s)	723
Eco47I	GGWCC	3 cut(s)	1371, 1562, 1597
Eco57I	CTGAAG	4 cut(s)	535, 1016, 1212, 1446
Eco81I	CCTNAGG	1 cut(s)	147
EcoO109I	RGGNCCY	2 cut(s)	98, 1597
EcoRII	CCWGG	3 cut(s)	480, 809, 1212
EcoRV	GATATC	1 cut(s)	723
EcoT14I	CCWWGG	4 cut(s)	418, 1028, 1049, 1229
EcoT22I	ATGCAT	1 cut(s)	741
ErhI	CCWWGG	4 cut(s)	418, 1028, 1049, 1229
FalI	AAGNNNNNCTT	4 cut(s)	533, 565, 1803, 1835
FaqI	GGGAC	1 cut(s)	321
FauNDI	CATATG	2 cut(s)	156, 1716
FbaI	TGATCA	2 cut(s)	1591, 1942
FblI	GTMKAC	1 cut(s)	71
Fnu4HI	GCNGC	5 cut(s)	507, 1252, 1255, 1575, 1578
FokI	GGATG	4 cut(s)	122, 592, 600, 1022
Fsp4HI	GCNGC	5 cut(s)	507, 1252, 1255, 1575, 1578
FspBI	CTAG	5 cut(s)	665, 726, 743, 1263, 1790
GlaI	GCGC	2 cut(s)	6, 884
GluI	GCNGC	5 cut(s)	507, 1252, 1255, 1575, 1578
HaeIII	GGCC	7 cut(s)	100, 153, 1033, 1120, 1225, 1294, 1419
HapII	CCGG	6 cut(s)	353, 368, 917, 1034, 1421, 1909
HgaI	GACGC	1 cut(s)	671
HhaI	GCGC	2 cut(s)	7, 885
Hin1I	GRCGYC	1 cut(s)	682
Hin6I	GCGC	2 cut(s)	5, 883
HinP1I	GCGC	2 cut(s)	5, 883
HincII	GTYRAC	4 cut(s)	247, 560, 695, 2008
HindII	GTYRAC	4 cut(s)	247, 560, 695, 2008
HpaI	GTTAAC	1 cut(s)	247
HpaII	CCGG	6 cut(s)	353, 368, 917, 1034, 1421, 1909
HphI	GGTGA	3 cut(s)	56, 638, 906
Hpy166II	GTNNAC	9 cut(s)	72, 247, 326, 350, 560, 695, 1536, 1747, 2008
Hpy188I	TCNGA	6 cut(s)	294, 406, 554, 996, 1585, 1645
Hpy188III	TCNNGA	9 cut(s)	185, 338, 497, 643, 775, 848, 1517, 1595, 1611
Hpy8I	GTNNAC	9 cut(s)	72, 247, 326, 350, 560, 695, 1536, 1747, 2008
HpyAV	CCTTC	5 cut(s)	720, 991, 1305, 1340, 1715
HpyCH4III	ACNGT	8 cut(s)	11, 222, 1024, 1129, 1543, 1687, 1915, 1992
HpyCH4IV	ACGT	1 cut(s)	1947
HpyF10VI	GCNNNNNNNGC	8 cut(s)	629, 767, 1209, 1231, 1251, 1263, 1432, 1505
HpyF3I	CTNAG	8 cut(s)	147, 225, 291, 430, 495, 1164, 1707, 1958
HpySE526I	ACGT	1 cut(s)	1947
Hsp92I	GRCGYC	1 cut(s)	682
HspAI	GCGC	2 cut(s)	5, 883
KpnI	GGTACC	1 cut(s)	1652
Ksp22I	TGATCA	2 cut(s)	1591, 1942
KspAI	GTTAAC	1 cut(s)	247
KspI	CCGCGG	1 cut(s)	566
LmnI	GCTCC	3 cut(s)	309, 355, 1383
Lsp1109I	GCAGC	4 cut(s)	493, 1263, 1561, 1564
LweI	GCATC	7 cut(s)	182, 619, 748, 1589, 1620, 1863, 1944
MaeI	CTAG	5 cut(s)	665, 726, 743, 1263, 1790
MaeII	ACGT	1 cut(s)	1947
MaeIII	GTNAC	2 cut(s)	17, 601
MfeI	CAATTG	1 cut(s)	1656
MflI	RGATCY	5 cut(s)	228, 514, 1272, 1679, 1697
MhlI	GDGCHC	1 cut(s)	117
MlyI	GAGTC	6 cut(s)	14, 141, 694, 905, 1331, 1466
MmeI	TCCRAC	2 cut(s)	386, 515
Mph1103I	ATGCAT	1 cut(s)	741
MroXI	GAANNNNTTC	2 cut(s)	1451, 1925
MseI	TTAA	8 cut(s)	246, 540, 836, 888, 1085, 1322, 1760, 1778
MslI	CAYNNNNRTG	3 cut(s)	450, 525, 1990
MspA1I	CMGCKG	3 cut(s)	565, 1254, 1435
MspI	CCGG	6 cut(s)	353, 368, 917, 1034, 1421, 1909
MspR9I	CCNGG	4 cut(s)	482, 811, 1214, 1421
MunI	CAATTG	1 cut(s)	1656
Mva1269I	GAATGC	1 cut(s)	1363
MvaI	CCWGG	3 cut(s)	482, 811, 1214
MvnI	CGCG	1 cut(s)	565
MwoI	GCNNNNNNNGC	8 cut(s)	629, 767, 1209, 1231, 1251, 1263, 1432, 1505
NciI	CCSGG	1 cut(s)	1421
NcoI	CCATGG	1 cut(s)	418
NdeI	CATATG	2 cut(s)	156, 1716
NlaIV	GGNNCC	7 cut(s)	357, 1226, 1372, 1555, 1599, 1650, 1681
NmuCI	GTSAC	2 cut(s)	17, 601
NsiI	ATGCAT	1 cut(s)	741
NspI	RCATGY	4 cut(s)	449, 739, 883, 1019
NspV	TTCGAA	2 cut(s)	439, 1403
PaeI	GCATGC	3 cut(s)	449, 739, 883
PagI	TCATGA	1 cut(s)	774
PceI	AGGCCT	1 cut(s)	1120
PctI	GAATGC	1 cut(s)	1363
PdmI	GAANNNNTTC	2 cut(s)	1451, 1925
PfeI	GAWTC	5 cut(s)	193, 927, 977, 1567, 1614
PflMI	CCANNNNNTGG	1 cut(s)	588
PkrI	GCNGC	5 cut(s)	508, 1253, 1256, 1576, 1579
PleI	GAGTC	6 cut(s)	14, 140, 694, 905, 1331, 1465
PpsI	GAGTC	6 cut(s)	14, 140, 694, 905, 1331, 1465
Ppu21I	YACGTR	1 cut(s)	1948
PpuMI	RGGWCCY	1 cut(s)	1597
Psp5II	RGGWCCY	1 cut(s)	1597
Psp6I	CCWGG	3 cut(s)	480, 809, 1212
PspGI	CCWGG	3 cut(s)	480, 809, 1212
PspN4I	GGNNCC	7 cut(s)	357, 1226, 1372, 1555, 1599, 1650, 1681
PspPI	GGNCC	7 cut(s)	98, 151, 1224, 1371, 1418, 1562, 1597
PspPPI	RGGWCCY	1 cut(s)	1597
PsrI	GAACNNNNNNTAC	2 cut(s)	1062, 1094
PstNI	CAGNNNCTG	1 cut(s)	404
PsuI	RGATCY	5 cut(s)	228, 514, 1272, 1679, 1697
PvuII	CAGCTG	1 cut(s)	1435
RsaI	GTAC	6 cut(s)	351, 595, 1026, 1650, 1705, 1950
RsaNI	GTAC	6 cut(s)	350, 594, 1025, 1649, 1704, 1949
RseI	CAYNNNNRTG	3 cut(s)	450, 525, 1990
SacII	CCGCGG	1 cut(s)	566
SaqAI	TTAA	8 cut(s)	246, 540, 836, 888, 1085, 1322, 1760, 1778
SatI	GCNGC	5 cut(s)	507, 1252, 1255, 1575, 1578
Sau96I	GGNCC	7 cut(s)	98, 151, 1224, 1371, 1418, 1562, 1597
SchI	GAGTC	6 cut(s)	14, 141, 694, 905, 1331, 1466
ScrFI	CCNGG	4 cut(s)	482, 811, 1214, 1421
SduI	GDGCHC	1 cut(s)	117
SfaNI	GCATC	7 cut(s)	182, 619, 748, 1589, 1620, 1863, 1944
SfcI	CTRYAG	1 cut(s)	939
Sfr303I	CCGCGG	1 cut(s)	566
SfuI	TTCGAA	2 cut(s)	439, 1403
SgrBI	CCGCGG	1 cut(s)	566
SinI	GGWCC	3 cut(s)	1371, 1562, 1597
SmiMI	CAYNNNNRTG	3 cut(s)	450, 525, 1990
SmlI	CTYRAG	2 cut(s)	643, 1267
SmoI	CTYRAG	2 cut(s)	643, 1267
SphI	GCATGC	3 cut(s)	449, 739, 883
SseBI	AGGCCT	1 cut(s)	1120
SsiI	CCGC	4 cut(s)	197, 563, 565, 1254
SspI	AATATT	1 cut(s)	1606
SspMI	CTAG	5 cut(s)	665, 726, 743, 1263, 1790
StuI	AGGCCT	1 cut(s)	1120
StyD4I	CCNGG	4 cut(s)	480, 809, 1212, 1419
StyI	CCWWGG	4 cut(s)	418, 1028, 1049, 1229
TaaI	ACNGT	8 cut(s)	11, 222, 1024, 1129, 1543, 1687, 1915, 1992
TaiI	ACGT	1 cut(s)	1950
TaqI	TCGA	3 cut(s)	439, 1403, 1455
TaqII	GACCGA	1 cut(s)	1579
TatI	WGTACW	1 cut(s)	593
TauI	GCSGC	1 cut(s)	1257
TfiI	GAWTC	5 cut(s)	193, 927, 977, 1567, 1614
Tru1I	TTAA	8 cut(s)	246, 540, 836, 888, 1085, 1322, 1760, 1778
Tru9I	TTAA	8 cut(s)	246, 540, 836, 888, 1085, 1322, 1760, 1778
TscAI	CASTG	5 cut(s)	20, 723, 937, 974, 1690
TseFI	GTSAC	2 cut(s)	17, 601
TseI	GCWGC	4 cut(s)	506, 1251, 1574, 1577
Tsp45I	GTSAC	2 cut(s)	17, 601
TspDTI	ATGAA	9 cut(s)	15, 294, 491, 509, 702, 1026, 1131, 1875, 1918
TspGWI	ACGGA	1 cut(s)	1071
TspRI	CASTG	5 cut(s)	20, 723, 937, 974, 1690
Van91I	CCANNNNNTGG	1 cut(s)	588
VpaK11BI	GGWCC	3 cut(s)	1371, 1562, 1597
XapI	RAATTY	2 cut(s)	536, 866
XceI	RCATGY	4 cut(s)	449, 739, 883, 1019
XcmI	CCANNNNNNNNNTGG	2 cut(s)	827, 1833
XmiI	GTMKAC	1 cut(s)	71
XmnI	GAANNNNTTC	2 cut(s)	1451, 1925
XspI	CTAG	5 cut(s)	665, 726, 743, 1263, 1790
Zsp2I	ATGCAT	1 cut(s)	741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.