Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0006016

Physical Location & Seq

Genomic Coordinates Forward (+)

51867197 .. 51872229

Gene Structure 5033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG288600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGATAGGTTTTGGAGGTGCTTTGTATACAGAGCTATGGAAGTTATGTGCAGGGCCTCTGGTGGATGTGCCCAGTCCTGGAGAGAGAGTGTTCTACTTTCCCCAGGGTCATATGGAACAACTGGAAGCATCAACAAATCAAGAACTGAATCCGCAAATCCCTCGGTTTAATATACCTTCGAAGATCCTTTGTCGTGTGGTTAACATTCAATTACTGGCAGAACGAGAAACCGATGAGGTTTATGCTCAGATCACTTTGCACCCAGAATCAGATCAAAGTGAACCTACAAGTCCTGATCCATGTGTACCGGAGCCTCCAAAACCGGCTACTTACTCGTTTTGCAAGATTTTGACAGCTTCTGATACAAGCACCCATGGAGGGTTCTCTGTTCTTCGAAAGCATGCTAATGATTGCTTGCCTCCTTTGGACATGAACCAAGCAACTCCAACTCAGGAATTGGTTGCCAAAGATCTTCATGGGTATGAGTGGAAATTTAAGCATATCTTCAGAGGTCAACCGCGGAGGCATTTACTTACCACAGGATGGAGTACATTTGTCACTTCCAAAAGATTGGTTGCTGGTGATGCATTTGTGTTTTTGAGGGGTGGTAATGGGGAACTACGGGTTGGGGTTCGGCGTCTTGCTCGTCAACAGACTCCCATGCCTTCATCAGTGATATCTAGCCAAAGTATGCATCTTGGAGTGCTTGCAACTGCTTCTCATGCTGTCATGACCTCAACTCTCTTTGTTGTCTATTACAAGCCCAGGACAAGCCAATTTATTGTTGGCTTAAACAAATATCTTGAAGCCATCAACAATAAGTTTTCTGTTGGCATGCGCTTTAAAATGCGATTTGAGGGGGAAGACTCACCGGAAAGAAGATTCACTGGCACTATAGTAGGGGTTGGGGATTTATCTCCTCACTGGTCTGAATCTAAATGGCGATCTCTGAAGGTTCAATGGGATGAACATGCCACAGTACCAAGGCCGGATAGAGTTTCTCCTTGGGAGATAGAGCCATTTGTAGCTTCTGTTCCGTTAAATCTTGCTCAACCAGTTGTAAAGAGCAAAAGGCCTAAAACTGTTGAAATTGCTTCATCTGAAATTACCACCAATTCAATTGCTTCACCTTTCTGGTATCAAGGGTCAAACCAGTCTGTCGAGCCAACTCAATTAGGCAGTGTTGCTGAAGTCCAAAGCTCTGGTAGCCAGGCTGTGTGGCCCCCGAGGCAGAAAGAGAGCAATGGCAGCAGCTACTCTAGCTCAAGGATCTGTGCAGAGGGCATCTGGCCTTCTTCTCCAAAGGTGAATGTCTCTTTAAGCCTTTTTGCAGAGTCACAAGAGGGCAACAAGAATGTTTCTATGGGGTCTACGCCACCTAGCTTCCCCTCCCCTCCTTCAAAACCTAGCAATGGCCCGGTGCATGACCAGCTGGAAACAGGGAAAAAGTCCGAGTCTTCTTCAGGTTTTCGGTTGTTTGGTTATGATGTGCCAAACTCAATTACTGCCCGTTTCCGGGAGAGAGAGCCAATGTTTACGACAGTGTGCTGTGGTGCCAAAGGACCTATTCTGGCCGCTGCATCAGAACTTGATCAGGACCTGGAAATTTCAAAAATCTCAAAAGAACAGATGCAAGTTGTATCAGAGATGCCACCAATCGAGACACAAAGCAAGCAGGGATCCACTGTTTCAACGAGATCTCGCACCAAGGTGCATATGCAGGGTGTTGCTGTTGGTCGTGCTGTGGACTTGACTGCATTGAAGGGTTATGATGATCTAATTAATGAGTTAGAGAAAATGTTTGAGATCAAAGGAGAGCTTCGTCCAGCAAACAAATGGGCAGTTGTTTTTACTGATGATGAGAATGACATGATGCTTCTTGGCGATGATCAATGGCAAGATTTTTGCCGGACTGTGAAGAAGATATTTATCTATTCAAGTGATTACGTACAGATGCTAAGACAAGGCAAGCAAAAAAATTCAGCATTAGTGTGTCAGGAGACTGAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

670

Amino Acids

74.45

Weight (kDa)

6.91

Isoelectric Point (pI)

51.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	113 - 213	1.8e-22	B3 DNA binding domain
BRWD_AD	PF25313	240 - 341	2.4e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	260 - 341	9.8e-37	Auxin response factor ancillary domain
AUX_IAA	PF02309	555 - 602	2.1e-06	AUX/IAA family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46530 AT2G46530 AT2G46530 AT3G61830 AT3G61830
fragaria_vesca	FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840
malus_domestica	MD01G1083400.v1.1 MD07G1152100.v1.1
prunus_persica	Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1
pyrus_communis	pycom07g15010
rosa_chinensis	RchiOBHm_Chr1g0360041
rosa_laevigata	RLG00000027836
rosa_multiflora	Rmu_ssc0000368.1_g000035
rosa_roxburghii	Rroxscaffold_4G00296430
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288600 Rh1BG254100 Rh1CG271600 Rh1DG283200
rosa_wichuraiana	Rw1G025590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1553
AccB7I	CCANNNNNTGG	1 cut(s)	543
AccI	GTMKAC	2 cut(s)	26, 1370
AccII	CGCG	1 cut(s)	520
AciI	CCGC	4 cut(s)	152, 518, 520, 1575
AclWI	GGATC	5 cut(s)	178, 290, 1277, 1674, 1687
AcoI	YGGCCR	1 cut(s)	1572
AcsI	RAATTY	3 cut(s)	491, 1605, 1978
AcuI	CTGAAG	4 cut(s)	490, 971, 1209, 1446
AcyI	GRCGYC	1 cut(s)	637
AfaI	GTAC	4 cut(s)	306, 550, 981, 1950
AfiI	CCNNNNNNNGG	6 cut(s)	77, 378, 543, 1412, 1515, 1516
AjnI	CCWGG	5 cut(s)	76, 102, 764, 1209, 1599
AjuI	GAANNNNNNNTTGG	2 cut(s)	609, 641
AleI	CACNNNNGTG	1 cut(s)	1709
AluBI	AGCT	9 cut(s)	34, 356, 1028, 1200, 1254, 1263, 1383, 1432, 1819
AluI	AGCT	9 cut(s)	34, 356, 1028, 1200, 1254, 1263, 1383, 1432, 1819
Alw26I	GTCTC	3 cut(s)	1318, 1655, 1994
AlwI	GGATC	5 cut(s)	178, 290, 1277, 1674, 1687
AlwNI	CAGNNNCTG	2 cut(s)	359, 1600
Ama87I	CYCGRG	1 cut(s)	1225
AoxI	GGCC	7 cut(s)	53, 986, 1073, 1220, 1289, 1414, 1572
ApeKI	GCWGC	3 cut(s)	1248, 1251, 1577
ApoI	RAATTY	3 cut(s)	491, 1605, 1978
AseI	ATTAAT	1 cut(s)	1782
AspLEI	GCGC	1 cut(s)	840
AspS9I	GGNCC	5 cut(s)	53, 1221, 1415, 1562, 1597
AsuC2I	CCSGG	2 cut(s)	1418, 1517
AsuHPI	GGTGA	4 cut(s)	593, 861, 1119, 1318
AsuII	TTCGAA	2 cut(s)	179, 394
AvaI	CYCGRG	1 cut(s)	1225
AvaII	GGWCC	2 cut(s)	1562, 1597
BaeGI	GKGCMC	1 cut(s)	72
BamHI	GGATCC	1 cut(s)	1679
BanI	GGYRCC	1 cut(s)	1553
BbsI	GAAGAC	2 cut(s)	870, 1449
BbvI	GCAGC	3 cut(s)	1260, 1263, 1564
BccI	CCATC	2 cut(s)	537, 818
BcgI	CGANNNNNNTGC	2 cut(s)	143, 177
BciT130I	CCWGG	5 cut(s)	78, 104, 766, 1211, 1601
BclI	TGATCA	2 cut(s)	1591, 1888
BcnI	CCSGG	2 cut(s)	1418, 1517
BcoDI	GTCTC	3 cut(s)	1318, 1655, 1994
BfaI	CTAG	4 cut(s)	681, 1260, 1380, 1407
BfmI	CTRYAG	1 cut(s)	894
BglI	GCCNNNNNGGC	1 cut(s)	1228
BglII	AGATCT	2 cut(s)	469, 1697
BisI	GCNGC	4 cut(s)	1249, 1252, 1575, 1578
BlsI	GCNGC	4 cut(s)	1250, 1253, 1576, 1579
Bme1390I	CCNGG	7 cut(s)	78, 104, 766, 1211, 1418, 1517, 1601
Bme18I	GGWCC	2 cut(s)	1562, 1597
BmeT110I	CYCGRG	1 cut(s)	1225
BmgT120I	GGNCC	5 cut(s)	53, 1221, 1415, 1562, 1597
BmiI	GGNNCC	4 cut(s)	312, 1223, 1555, 1681
BmrFI	CCNGG	7 cut(s)	78, 104, 766, 1211, 1418, 1517, 1601
BmrI	ACTGGG	1 cut(s)	66
BmsI	GCATC	9 cut(s)	137, 574, 703, 1293, 1589, 1620, 1638, 1863, 1944
BmuI	ACTGGG	1 cut(s)	66
BpiI	GAAGAC	2 cut(s)	870, 1449
BpmI	CTGGAG	1 cut(s)	99
Bpu14I	TTCGAA	2 cut(s)	179, 394
BpuEI	CTTGAG	1 cut(s)	1249
BpuMI	CCSGG	2 cut(s)	1418, 1517
BsaAI	YACGTR	1 cut(s)	1948
BsaBI	GATNNNNATC	1 cut(s)	1928
BsaHI	GRCGYC	1 cut(s)	637
BsaWI	WCCGGW	2 cut(s)	307, 871
BsaXI	ACNNNNNCTCC	2 cut(s)	72, 102
Bsc4I	CCNNNNNNNGG	6 cut(s)	77, 378, 543, 1412, 1515, 1516
Bse118I	RCCGGY	1 cut(s)	322
Bse1I	ACTGG	7 cut(s)	72, 126, 219, 892, 929, 1055, 1153
Bse3DI	GCAATG	2 cut(s)	1249, 1417
Bse8I	GATNNNNATC	1 cut(s)	1928
BseBI	CCWGG	5 cut(s)	78, 104, 766, 1211, 1601
BseGI	GGATG	3 cut(s)	70, 548, 970
BseJI	GATNNNNATC	1 cut(s)	1928
BseLI	CCNNNNNNNGG	6 cut(s)	77, 378, 543, 1412, 1515, 1516
BseMI	GCAATG	2 cut(s)	1249, 1417
BseMII	CTCAG	2 cut(s)	260, 464
BseNI	ACTGG	7 cut(s)	72, 126, 219, 892, 929, 1055, 1153
BseRI	GAGGAG	1 cut(s)	909
BseSI	GKGCMC	1 cut(s)	72
BseXI	GCAGC	3 cut(s)	1260, 1263, 1564
BsgI	GTGCAG	2 cut(s)	69, 1296
Bsh1236I	CGCG	1 cut(s)	520
BshFI	GGCC	7 cut(s)	55, 988, 1075, 1222, 1291, 1416, 1574
BshNI	GGYRCC	1 cut(s)	1553
BsiHKCI	CYCGRG	1 cut(s)	1225
BsiSI	CCGG	7 cut(s)	308, 323, 872, 989, 1418, 1516, 1909
BslI	CCNNNNNNNGG	6 cut(s)	77, 378, 543, 1412, 1515, 1516
BsmAI	GTCTC	3 cut(s)	1318, 1655, 1994
BsnI	GGCC	7 cut(s)	55, 988, 1075, 1222, 1291, 1416, 1574
BsoBI	CYCGRG	1 cut(s)	1225
Bsp119I	TTCGAA	2 cut(s)	179, 394
Bsp1286I	GDGCHC	1 cut(s)	72
Bsp19I	CCATGG	1 cut(s)	373
BspACI	CCGC	4 cut(s)	152, 518, 520, 1575
BspANI	GGCC	7 cut(s)	55, 988, 1075, 1222, 1291, 1416, 1574
BspCNI	CTCAG	2 cut(s)	259, 463
BspFNI	CGCG	1 cut(s)	520
BspHI	TCATGA	1 cut(s)	729
BspLI	GGNNCC	4 cut(s)	312, 1223, 1555, 1681
BspPI	GGATC	5 cut(s)	178, 290, 1277, 1674, 1687
BspT104I	TTCGAA	2 cut(s)	179, 394
BspT107I	GGYRCC	1 cut(s)	1553
BsrDI	GCAATG	2 cut(s)	1249, 1417
BsrFI	RCCGGY	1 cut(s)	322
BsrI	ACTGG	7 cut(s)	72, 126, 219, 892, 929, 1055, 1153
BssAI	RCCGGY	1 cut(s)	322
BssNAI	GTATAC	1 cut(s)	27
BssNI	GRCGYC	1 cut(s)	637
BssT1I	CCWWGG	4 cut(s)	373, 983, 1004, 1707
Bst1107I	GTATAC	1 cut(s)	27
Bst2UI	CCWGG	5 cut(s)	78, 104, 766, 1211, 1601
Bst4CI	ACNGT	5 cut(s)	979, 1084, 1543, 1687, 1915
BstACI	GRCGYC	1 cut(s)	637
BstBAI	YACGTR	1 cut(s)	1948
BstBI	TTCGAA	2 cut(s)	179, 394
BstC8I	GCNNGC	6 cut(s)	402, 416, 708, 836, 1673, 1970
BstDEI	CTNAG	3 cut(s)	246, 450, 1958
BstDSI	CCRYGG	2 cut(s)	373, 518
BstF5I	GGATG	3 cut(s)	70, 548, 970
BstFNI	CGCG	1 cut(s)	520
BstHHI	GCGC	1 cut(s)	840
BstMAI	GTCTC	3 cut(s)	1318, 1655, 1994
BstMWI	GCNNNNNNNGC	7 cut(s)	584, 722, 1206, 1228, 1248, 1260, 1429
BstNI	CCWGG	5 cut(s)	78, 104, 766, 1211, 1601
BstNSI	RCATGY	3 cut(s)	404, 838, 974
BstSCI	CCNGG	7 cut(s)	76, 102, 764, 1209, 1416, 1515, 1599
BstSFI	CTRYAG	1 cut(s)	894
BstSLI	GKGCMC	1 cut(s)	72
BstSNI	TACGTA	1 cut(s)	1948
BstUI	CGCG	1 cut(s)	520
BstV1I	GCAGC	3 cut(s)	1260, 1263, 1564
BstV2I	GAAGAC	2 cut(s)	870, 1449
BstX2I	RGATCY	5 cut(s)	183, 469, 1269, 1679, 1697
BstXI	CCANNNNNNTGG	2 cut(s)	571, 1202
BstYI	RGATCY	5 cut(s)	183, 469, 1269, 1679, 1697
BstZ17I	GTATAC	1 cut(s)	27
BsuRI	GGCC	7 cut(s)	55, 988, 1075, 1222, 1291, 1416, 1574
BtgI	CCRYGG	2 cut(s)	373, 518
BtgZI	GCGATG	1 cut(s)	1899
BtsCI	GGATG	3 cut(s)	70, 548, 970
BtsI	GCAGTG	1 cut(s)	1186
BtsIMutI	CAGTG	6 cut(s)	678, 885, 922, 1186, 1548, 1683
Cac8I	GCNNGC	6 cut(s)	402, 416, 708, 836, 1673, 1970
CaiI	CAGNNNCTG	2 cut(s)	359, 1600
CciI	TCATGA	1 cut(s)	729
CfoI	GCGC	1 cut(s)	840
Cfr10I	RCCGGY	1 cut(s)	322
Cfr13I	GGNCC	5 cut(s)	53, 1221, 1415, 1562, 1597
Cfr42I	CCGCGG	1 cut(s)	521
CseI	GACGC	1 cut(s)	626
Csp6I	GTAC	4 cut(s)	305, 549, 980, 1949
CviQI	GTAC	4 cut(s)	305, 549, 980, 1949
DdeI	CTNAG	3 cut(s)	246, 450, 1958
DraI	TTTAAA	1 cut(s)	844
EaeI	YGGCCR	1 cut(s)	1572
Eco105I	TACGTA	1 cut(s)	1948
Eco130I	CCWWGG	4 cut(s)	373, 983, 1004, 1707
Eco147I	AGGCCT	1 cut(s)	1075
Eco32I	GATATC	1 cut(s)	678
Eco47I	GGWCC	2 cut(s)	1562, 1597
Eco57I	CTGAAG	4 cut(s)	490, 971, 1209, 1446
Eco88I	CYCGRG	1 cut(s)	1225
EcoO109I	RGGNCCY	3 cut(s)	53, 1562, 1597
EcoRII	CCWGG	5 cut(s)	76, 102, 764, 1209, 1599
EcoRV	GATATC	1 cut(s)	678
EcoT14I	CCWWGG	4 cut(s)	373, 983, 1004, 1707
EcoT22I	ATGCAT	2 cut(s)	589, 696
ErhI	CCWWGG	4 cut(s)	373, 983, 1004, 1707
FalI	AAGNNNNNCTT	4 cut(s)	488, 520, 1803, 1835
FauNDI	CATATG	2 cut(s)	111, 1716
FbaI	TGATCA	2 cut(s)	1591, 1888
FblI	GTMKAC	2 cut(s)	26, 1370
Fnu4HI	GCNGC	4 cut(s)	1249, 1252, 1575, 1578
FokI	GGATG	3 cut(s)	77, 555, 977
Fsp4HI	GCNGC	4 cut(s)	1249, 1252, 1575, 1578
FspBI	CTAG	4 cut(s)	681, 1260, 1380, 1407
GlaI	GCGC	1 cut(s)	839
GluI	GCNGC	4 cut(s)	1249, 1252, 1575, 1578
GsuI	CTGGAG	1 cut(s)	99
HaeIII	GGCC	7 cut(s)	55, 988, 1075, 1222, 1291, 1416, 1574
HapII	CCGG	7 cut(s)	308, 323, 872, 989, 1418, 1516, 1909
HgaI	GACGC	1 cut(s)	626
HhaI	GCGC	1 cut(s)	840
Hin1I	GRCGYC	1 cut(s)	637
Hin6I	GCGC	1 cut(s)	838
HinP1I	GCGC	1 cut(s)	838
HincII	GTYRAC	3 cut(s)	202, 515, 650
HindII	GTYRAC	3 cut(s)	202, 515, 650
HinfI	GANTC	8 cut(s)	148, 266, 655, 866, 882, 932, 1334, 1454
HpaI	GTTAAC	1 cut(s)	202
HpaII	CCGG	7 cut(s)	308, 323, 872, 989, 1418, 1516, 1909
HphI	GGTGA	4 cut(s)	593, 861, 1119, 1318
Hpy166II	GTNNAC	9 cut(s)	27, 202, 281, 305, 515, 650, 1371, 1536, 1747
Hpy188III	TCNNGA	8 cut(s)	140, 293, 452, 730, 803, 1595, 1660, 1997
Hpy8I	GTNNAC	9 cut(s)	27, 202, 281, 305, 515, 650, 1371, 1536, 1747
HpyAV	CCTTC	6 cut(s)	186, 675, 946, 1302, 1407, 1756
HpyCH4III	ACNGT	5 cut(s)	979, 1084, 1543, 1687, 1915
HpyCH4IV	ACGT	1 cut(s)	1947
HpyF10VI	GCNNNNNNNGC	7 cut(s)	584, 722, 1206, 1228, 1248, 1260, 1429
HpyF3I	CTNAG	3 cut(s)	246, 450, 1958
HpySE526I	ACGT	1 cut(s)	1947
Hsp92I	GRCGYC	1 cut(s)	637
HspAI	GCGC	1 cut(s)	838
Ksp22I	TGATCA	2 cut(s)	1591, 1888
KspAI	GTTAAC	1 cut(s)	202
KspI	CCGCGG	1 cut(s)	521
LmnI	GCTCC	1 cut(s)	310
Lsp1109I	GCAGC	3 cut(s)	1260, 1263, 1564
LweI	GCATC	9 cut(s)	137, 574, 703, 1293, 1589, 1620, 1638, 1863, 1944
MaeI	CTAG	4 cut(s)	681, 1260, 1380, 1407
MaeII	ACGT	1 cut(s)	1947
MaeIII	GTNAC	2 cut(s)	556, 1335
MfeI	CAATTG	1 cut(s)	1119
MflI	RGATCY	5 cut(s)	183, 469, 1269, 1679, 1697
MhlI	GDGCHC	1 cut(s)	72
MlyI	GAGTC	4 cut(s)	649, 860, 1343, 1463
MmeI	TCCRAC	1 cut(s)	470
Mph1103I	ATGCAT	2 cut(s)	589, 696
MseI	TTAA	8 cut(s)	168, 201, 495, 791, 843, 1040, 1319, 1782
MslI	CAYNNNNRTG	4 cut(s)	405, 480, 1709, 1990
MspA1I	CMGCKG	3 cut(s)	520, 1432, 1577
MspI	CCGG	7 cut(s)	308, 323, 872, 989, 1418, 1516, 1909
MspR9I	CCNGG	7 cut(s)	78, 104, 766, 1211, 1418, 1517, 1601
MunI	CAATTG	1 cut(s)	1119
MvaI	CCWGG	5 cut(s)	78, 104, 766, 1211, 1601
MvnI	CGCG	1 cut(s)	520
MwoI	GCNNNNNNNGC	7 cut(s)	584, 722, 1206, 1228, 1248, 1260, 1429
NciI	CCSGG	2 cut(s)	1418, 1517
NcoI	CCATGG	1 cut(s)	373
NdeI	CATATG	2 cut(s)	111, 1716
NlaIV	GGNNCC	4 cut(s)	312, 1223, 1555, 1681
NmuCI	GTSAC	2 cut(s)	556, 1335
NsiI	ATGCAT	2 cut(s)	589, 696
NspI	RCATGY	3 cut(s)	404, 838, 974
NspV	TTCGAA	2 cut(s)	179, 394
OliI	CACNNNNGTG	1 cut(s)	1709
PaeI	GCATGC	2 cut(s)	404, 838
PagI	TCATGA	1 cut(s)	729
PasI	CCCWGGG	1 cut(s)	103
PceI	AGGCCT	1 cut(s)	1075
PfeI	GAWTC	4 cut(s)	148, 266, 882, 932
PflMI	CCANNNNNTGG	1 cut(s)	543
PfoI	TCCNGGA	2 cut(s)	76, 1515
PkrI	GCNGC	4 cut(s)	1250, 1253, 1576, 1579
PleI	GAGTC	4 cut(s)	649, 860, 1342, 1462
PpsI	GAGTC	4 cut(s)	649, 860, 1342, 1462
Ppu21I	YACGTR	1 cut(s)	1948
PpuMI	RGGWCCY	2 cut(s)	1562, 1597
PshBI	ATTAAT	1 cut(s)	1782
Psp5II	RGGWCCY	2 cut(s)	1562, 1597
Psp6I	CCWGG	5 cut(s)	76, 102, 764, 1209, 1599
PspGI	CCWGG	5 cut(s)	76, 102, 764, 1209, 1599
PspN4I	GGNNCC	4 cut(s)	312, 1223, 1555, 1681
PspPI	GGNCC	5 cut(s)	53, 1221, 1415, 1562, 1597
PspPPI	RGGWCCY	2 cut(s)	1562, 1597
PsrI	GAACNNNNNNTAC	2 cut(s)	1017, 1049
PstNI	CAGNNNCTG	2 cut(s)	359, 1600
PsuI	RGATCY	5 cut(s)	183, 469, 1269, 1679, 1697
PvuII	CAGCTG	1 cut(s)	1432
RsaI	GTAC	4 cut(s)	306, 550, 981, 1950
RsaNI	GTAC	4 cut(s)	305, 549, 980, 1949
RseI	CAYNNNNRTG	4 cut(s)	405, 480, 1709, 1990
SacII	CCGCGG	1 cut(s)	521
SaqAI	TTAA	8 cut(s)	168, 201, 495, 791, 843, 1040, 1319, 1782
SatI	GCNGC	4 cut(s)	1249, 1252, 1575, 1578
Sau96I	GGNCC	5 cut(s)	53, 1221, 1415, 1562, 1597
SchI	GAGTC	4 cut(s)	649, 860, 1343, 1463
ScrFI	CCNGG	7 cut(s)	78, 104, 766, 1211, 1418, 1517, 1601
SduI	GDGCHC	1 cut(s)	72
SfaNI	GCATC	9 cut(s)	137, 574, 703, 1293, 1589, 1620, 1638, 1863, 1944
SfcI	CTRYAG	1 cut(s)	894
Sfr303I	CCGCGG	1 cut(s)	521
SfuI	TTCGAA	2 cut(s)	179, 394
SgrBI	CCGCGG	1 cut(s)	521
SinI	GGWCC	2 cut(s)	1562, 1597
SmiMI	CAYNNNNRTG	4 cut(s)	405, 480, 1709, 1990
SmlI	CTYRAG	1 cut(s)	1264
SmoI	CTYRAG	1 cut(s)	1264
SnaBI	TACGTA	1 cut(s)	1948
SphI	GCATGC	2 cut(s)	404, 838
SseBI	AGGCCT	1 cut(s)	1075
SsiI	CCGC	4 cut(s)	152, 518, 520, 1575
SspMI	CTAG	4 cut(s)	681, 1260, 1380, 1407
StuI	AGGCCT	1 cut(s)	1075
StyD4I	CCNGG	7 cut(s)	76, 102, 764, 1209, 1416, 1515, 1599
StyI	CCWWGG	4 cut(s)	373, 983, 1004, 1707
TaaI	ACNGT	5 cut(s)	979, 1084, 1543, 1687, 1915
TaiI	ACGT	1 cut(s)	1950
TaqI	TCGA	4 cut(s)	179, 394, 1161, 1659
TatI	WGTACW	1 cut(s)	548
TauI	GCSGC	1 cut(s)	1577
TfiI	GAWTC	4 cut(s)	148, 266, 882, 932
Tru1I	TTAA	8 cut(s)	168, 201, 495, 791, 843, 1040, 1319, 1782
Tru9I	TTAA	8 cut(s)	168, 201, 495, 791, 843, 1040, 1319, 1782
TscAI	CASTG	6 cut(s)	678, 892, 929, 1186, 1548, 1690
TseFI	GTSAC	2 cut(s)	556, 1335
TseI	GCWGC	3 cut(s)	1248, 1251, 1577
Tsp45I	GTSAC	2 cut(s)	556, 1335
TspDTI	ATGAA	5 cut(s)	446, 464, 657, 981, 1086
TspGWI	ACGGA	1 cut(s)	1026
TspRI	CASTG	6 cut(s)	678, 892, 929, 1186, 1548, 1690
Van91I	CCANNNNNTGG	1 cut(s)	543
VpaK11BI	GGWCC	2 cut(s)	1562, 1597
VspI	ATTAAT	1 cut(s)	1782
XapI	RAATTY	3 cut(s)	491, 1605, 1978
XceI	RCATGY	3 cut(s)	404, 838, 974
XcmI	CCANNNNNNNNNTGG	2 cut(s)	782, 1833
XmiI	GTMKAC	2 cut(s)	26, 1370
XspI	CTAG	4 cut(s)	681, 1260, 1380, 1407
Zsp2I	ATGCAT	2 cut(s)	589, 696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.