Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006016

Physical Location & Seq

Genomic Coordinates Forward (+)

51876901 .. 51881447

Gene Structure 4547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58506

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGGCGCACAGCGAGTGTGAGTCTTCATCTATTTCTCGTGCTACTGCCGATACAGGTTTTGGAGGTGCTTTGTATACAGAGCTATGGAAGTTATGTGCAGGGCCTCTGGTGGATGTGCCCAGTCCTGGAGAGAGAGTGTTCTACTTTCCGCAGGGTCATATGGAACAACTGGAAGCATCAACAAATCAAGAACTGAATCCGCAAATCCCTCGGTTTAATATACCTTCGAAGATCCTTTGTCGTGTGGTTAACATTCAATTACTGGCAGAACGAGAAACCGATGAGGTTTATGCTCAGATCACTTTGCACCCAGAATCAGATCAAAGTGAACCTACAAGTCCTGATCCATGTGTACCAGAGCCTCCAAAACCGGCTACTTACTCGTTTTGCAAGATTCTGACAGCTTCTGATACAAGCACCCATGGAGGGTTCTCTGTTCTTCGAAAGCATGCTAATGATTGCTTGCCTCCTTTGGACATGAACCAAGCAACTCCAACTCAGGAATTGGTTGCCAAAGATCTTCATGGGTATGAGTGGAAATTTAAGCATATCTTCAGAGGTCAACCTCGGAGGCATTTACTTACCACAGGATGGAGTACATTTGTCACTTCCAAAAGATTGGTTGCTGGTGATGCATTTGTGTTTTTGAGGGGTGGTAATGGGGAACTACGGGTTGGGGTTCGGCGTCTTGCTCGTCAACAGACTCCCATGCCTTCATCAGTGATATCTAGCCAAAGTATGCATCTTGGAGTGCTTGCAACTGCTTCTCATGCTGTCATGACCTCAACTCTCTTTGTTGTCTATTACAAGCCCAGGACAAGCCAATTTATTGTTGGATTAAACAAATATCTTGAAGCCATCAACAATAAGTTTTCTGTTGGCATGCGCTTTAAAATGCGATTTGAGGGGGAAGACTCACCGGAAAGAAGATTCACTGGCACTATAGTAGGGGTTGGGGATTTATCTCCTCACTGGTCTGAATCTAAATGGCGATCTCTGAAGGTTCAATGGGATGAACATGCCACAGTACCAAGGCCGGATAGGGTTTCTCCTTGGGAGATAGAGCCATTTGTAGCTTCTGTTCCGTTAAATCTTGCTCAACCAGTTGTAAAGAGCAAAAGGCCTAAAACTGTTGAAATTGCTTCATCTGAAATTACCACCAATTCAATTGCTTCACCTTTCTGGTATCAAGGGTCAAACCAGTCTGTCGAGCCAACTCAATTAGGCAGTGTTGCTGAAGTCCAAAGCTCTGGTAGCCAGGCTGTGTGGCCCCCGAGGCAGAAAGAGAGCAATGGCAGCAGCTACTCTAGCTCAAGGATCTGTGCAGAGGGCATCTGGCCTTCTTCTCCAAAGGTGAATGTCTCTTTAAGCCTTTTTGCAGACTCACAAGAGGGCAACAAGAATGTTTCTATGGGGTCTACGCCACCTAGCTTCCCCTCCCCTCCTTCAAAACCTAGCAATGGCCCGGTGCATGACCAGCTGGAAACAGGGAAAAAGTCCGAGTCTTCTTCAGGTTTTCGGTTGTTTGGTTATGATGTGCCAAACTCAATTACTGCCCGTTTCCGGGAGAGAGAGCCAATGTTTACGACAGTGTGCTGTGGTGCCAAAGGACCTATTCTGGCCGCTGCATCAGAACTTGATCAGGACCTGGAAATTTCAAAAATCTCAAAAGAACAGATGCAAGTTGTATCAGAGATGCCACCAATCGAGACACAAAGCAAGCAGGGATCCACTGTTTCAACGAGATCTCGCACCAAGGTGCATATGCAGGGTGTTGCTGTTGGTCGTGCTGTGGACTTGACTGCATTGAAGGGTTATGATGATCTAATTAATGAGTTGGAGAAAATGTTTGAGATCAAAGGAGAGCTTCGTCCAGCAAACAAATGGGCAGTTGTTTTTACTGATGATGAGAATGACATGATGCTTCTTGGCGATGATCAATGGCAAGATTTTTGCCGGACTGTGAAGAAGATATTTATCTATTCAAGTGATTACGTACAGATGCTAAGACAAGGCAAGCAAAAAAATTCAGCATTAGTGTGTCAGGAGACTGAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

686

Amino Acids

76.06

Weight (kDa)

6.57

Isoelectric Point (pI)

52.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	129 - 229	1.8e-22	B3 DNA binding domain
BRWD_AD	PF25313	256 - 357	2.5e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	276 - 357	1e-36	Auxin response factor ancillary domain
AUX_IAA	PF02309	571 - 618	2.1e-06	AUX/IAA family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46530 AT2G46530 AT2G46530 AT3G61830 AT3G61830
fragaria_vesca	FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840
malus_domestica	MD01G1083400.v1.1 MD07G1152100.v1.1
prunus_persica	Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1
pyrus_communis	pycom07g15010
rosa_chinensis	RchiOBHm_Chr1g0360041
rosa_laevigata	RLG00000027836
rosa_multiflora	Rmu_ssc0000368.1_g000035
rosa_roxburghii	Rroxscaffold_4G00296430
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288600 Rh1BG254100 Rh1CG271600 Rh1DG283200
rosa_wichuraiana	Rw1G025590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1601
AccB7I	CCANNNNNTGG	1 cut(s)	591
AccI	GTMKAC	2 cut(s)	74, 1418
AciI	CCGC	3 cut(s)	149, 200, 1623
AclWI	GGATC	5 cut(s)	226, 338, 1325, 1722, 1735
AcoI	YGGCCR	1 cut(s)	1620
AcsI	RAATTY	3 cut(s)	539, 1653, 2026
AcuI	CTGAAG	4 cut(s)	538, 1019, 1257, 1494
AcyI	GRCGYC	1 cut(s)	685
AfaI	GTAC	4 cut(s)	354, 598, 1029, 1998
AfiI	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1460, 1563, 1564
AjnI	CCWGG	4 cut(s)	124, 812, 1257, 1647
AjuI	GAANNNNNNNTTGG	2 cut(s)	657, 689
AleI	CACNNNNGTG	1 cut(s)	1757
AluBI	AGCT	9 cut(s)	82, 404, 1076, 1248, 1302, 1311, 1431, 1480, 1867
AluI	AGCT	9 cut(s)	82, 404, 1076, 1248, 1302, 1311, 1431, 1480, 1867
Alw26I	GTCTC	3 cut(s)	1366, 1703, 2042
AlwI	GGATC	5 cut(s)	226, 338, 1325, 1722, 1735
AlwNI	CAGNNNCTG	2 cut(s)	407, 1648
Ama87I	CYCGRG	1 cut(s)	1273
AoxI	GGCC	7 cut(s)	101, 1034, 1121, 1268, 1337, 1462, 1620
ApeKI	GCWGC	3 cut(s)	1296, 1299, 1625
ApoI	RAATTY	3 cut(s)	539, 1653, 2026
AseI	ATTAAT	1 cut(s)	1830
AspLEI	GCGC	2 cut(s)	7, 888
AspS9I	GGNCC	5 cut(s)	101, 1269, 1463, 1610, 1645
AsuC2I	CCSGG	2 cut(s)	1466, 1565
AsuHPI	GGTGA	4 cut(s)	641, 909, 1167, 1366
AsuII	TTCGAA	2 cut(s)	227, 442
AvaI	CYCGRG	1 cut(s)	1273
AvaII	GGWCC	2 cut(s)	1610, 1645
BaeGI	GKGCMC	1 cut(s)	120
BamHI	GGATCC	1 cut(s)	1727
BanI	GGYRCC	1 cut(s)	1601
BauI	CACGAG	1 cut(s)	36
BbsI	GAAGAC	3 cut(s)	15, 918, 1497
BbvI	GCAGC	3 cut(s)	1308, 1311, 1612
BccI	CCATC	2 cut(s)	585, 866
BcgI	CGANNNNNNTGC	2 cut(s)	191, 225
BciT130I	CCWGG	4 cut(s)	126, 814, 1259, 1649
BclI	TGATCA	2 cut(s)	1639, 1936
BcnI	CCSGG	2 cut(s)	1466, 1565
BcoDI	GTCTC	3 cut(s)	1366, 1703, 2042
BfaI	CTAG	4 cut(s)	729, 1308, 1428, 1455
BfmI	CTRYAG	1 cut(s)	942
BglI	GCCNNNNNGGC	1 cut(s)	1276
BglII	AGATCT	2 cut(s)	517, 1745
BisI	GCNGC	4 cut(s)	1297, 1300, 1623, 1626
BlsI	GCNGC	4 cut(s)	1298, 1301, 1624, 1627
Bme1390I	CCNGG	6 cut(s)	126, 814, 1259, 1466, 1565, 1649
Bme18I	GGWCC	2 cut(s)	1610, 1645
BmeT110I	CYCGRG	1 cut(s)	1273
BmgT120I	GGNCC	5 cut(s)	101, 1269, 1463, 1610, 1645
BmiI	GGNNCC	3 cut(s)	1271, 1603, 1729
BmrFI	CCNGG	6 cut(s)	126, 814, 1259, 1466, 1565, 1649
BmrI	ACTGGG	1 cut(s)	114
BmsI	GCATC	9 cut(s)	185, 622, 751, 1341, 1637, 1668, 1686, 1911, 1992
BmuI	ACTGGG	1 cut(s)	114
BpiI	GAAGAC	3 cut(s)	15, 918, 1497
BpmI	CTGGAG	1 cut(s)	147
Bpu14I	TTCGAA	2 cut(s)	227, 442
BpuEI	CTTGAG	1 cut(s)	1297
BpuMI	CCSGG	2 cut(s)	1466, 1565
BsaAI	YACGTR	1 cut(s)	1996
BsaBI	GATNNNNATC	1 cut(s)	1976
BsaHI	GRCGYC	1 cut(s)	685
BsaJI	CCNNGG	8 cut(s)	209, 421, 566, 812, 1031, 1052, 1274, 1755
BsaWI	WCCGGW	1 cut(s)	919
BsaXI	ACNNNNNCTCC	4 cut(s)	120, 150, 1832, 1862
Bsc4I	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1460, 1563, 1564
Bse118I	RCCGGY	1 cut(s)	370
Bse1I	ACTGG	7 cut(s)	120, 174, 267, 940, 977, 1103, 1201
Bse3DI	GCAATG	2 cut(s)	1297, 1465
Bse8I	GATNNNNATC	1 cut(s)	1976
BseBI	CCWGG	4 cut(s)	126, 814, 1259, 1649
BseDI	CCNNGG	8 cut(s)	209, 421, 566, 812, 1031, 1052, 1274, 1755
BseGI	GGATG	3 cut(s)	118, 596, 1018
BseJI	GATNNNNATC	1 cut(s)	1976
BseLI	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1460, 1563, 1564
BseMI	GCAATG	2 cut(s)	1297, 1465
BseMII	CTCAG	2 cut(s)	308, 512
BseNI	ACTGG	7 cut(s)	120, 174, 267, 940, 977, 1103, 1201
BseRI	GAGGAG	1 cut(s)	957
BseSI	GKGCMC	1 cut(s)	120
BseXI	GCAGC	3 cut(s)	1308, 1311, 1612
BsgI	GTGCAG	2 cut(s)	117, 1344
BshFI	GGCC	7 cut(s)	103, 1036, 1123, 1270, 1339, 1464, 1622
BshNI	GGYRCC	1 cut(s)	1601
BsiHKCI	CYCGRG	1 cut(s)	1273
BsiSI	CCGG	6 cut(s)	371, 920, 1037, 1466, 1564, 1957
BslI	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1460, 1563, 1564
BsmAI	GTCTC	3 cut(s)	1366, 1703, 2042
BsnI	GGCC	7 cut(s)	103, 1036, 1123, 1270, 1339, 1464, 1622
BsoBI	CYCGRG	1 cut(s)	1273
Bsp119I	TTCGAA	2 cut(s)	227, 442
Bsp1286I	GDGCHC	1 cut(s)	120
Bsp19I	CCATGG	1 cut(s)	421
BspACI	CCGC	3 cut(s)	149, 200, 1623
BspANI	GGCC	7 cut(s)	103, 1036, 1123, 1270, 1339, 1464, 1622
BspCNI	CTCAG	2 cut(s)	307, 511
BspHI	TCATGA	1 cut(s)	777
BspLI	GGNNCC	3 cut(s)	1271, 1603, 1729
BspPI	GGATC	5 cut(s)	226, 338, 1325, 1722, 1735
BspT104I	TTCGAA	2 cut(s)	227, 442
BspT107I	GGYRCC	1 cut(s)	1601
BsrDI	GCAATG	2 cut(s)	1297, 1465
BsrFI	RCCGGY	1 cut(s)	370
BsrI	ACTGG	7 cut(s)	120, 174, 267, 940, 977, 1103, 1201
BssAI	RCCGGY	1 cut(s)	370
BssECI	CCNNGG	8 cut(s)	209, 421, 566, 812, 1031, 1052, 1274, 1755
BssNAI	GTATAC	1 cut(s)	75
BssNI	GRCGYC	1 cut(s)	685
BssSI	CACGAG	1 cut(s)	36
BssT1I	CCWWGG	4 cut(s)	421, 1031, 1052, 1755
Bst1107I	GTATAC	1 cut(s)	75
Bst2BI	CACGAG	1 cut(s)	36
Bst2UI	CCWGG	4 cut(s)	126, 814, 1259, 1649
Bst4CI	ACNGT	5 cut(s)	1027, 1132, 1591, 1735, 1963
BstACI	GRCGYC	1 cut(s)	685
BstBAI	YACGTR	1 cut(s)	1996
BstBI	TTCGAA	2 cut(s)	227, 442
BstC8I	GCNNGC	6 cut(s)	450, 464, 756, 884, 1721, 2018
BstDEI	CTNAG	3 cut(s)	294, 498, 2006
BstDSI	CCRYGG	1 cut(s)	421
BstF5I	GGATG	3 cut(s)	118, 596, 1018
BstHHI	GCGC	2 cut(s)	7, 888
BstMAI	GTCTC	3 cut(s)	1366, 1703, 2042
BstMWI	GCNNNNNNNGC	7 cut(s)	632, 770, 1254, 1276, 1296, 1308, 1477
BstNI	CCWGG	4 cut(s)	126, 814, 1259, 1649
BstNSI	RCATGY	3 cut(s)	452, 886, 1022
BstSCI	CCNGG	6 cut(s)	124, 812, 1257, 1464, 1563, 1647
BstSFI	CTRYAG	1 cut(s)	942
BstSLI	GKGCMC	1 cut(s)	120
BstSNI	TACGTA	1 cut(s)	1996
BstV1I	GCAGC	3 cut(s)	1308, 1311, 1612
BstV2I	GAAGAC	3 cut(s)	15, 918, 1497
BstX2I	RGATCY	5 cut(s)	231, 517, 1317, 1727, 1745
BstXI	CCANNNNNNTGG	2 cut(s)	619, 1250
BstYI	RGATCY	5 cut(s)	231, 517, 1317, 1727, 1745
BstZ17I	GTATAC	1 cut(s)	75
BsuRI	GGCC	7 cut(s)	103, 1036, 1123, 1270, 1339, 1464, 1622
BtgI	CCRYGG	1 cut(s)	421
BtgZI	GCGATG	1 cut(s)	1947
BtsCI	GGATG	3 cut(s)	118, 596, 1018
BtsI	GCAGTG	1 cut(s)	1234
BtsIMutI	CAGTG	6 cut(s)	726, 933, 970, 1234, 1596, 1731
Cac8I	GCNNGC	6 cut(s)	450, 464, 756, 884, 1721, 2018
CaiI	CAGNNNCTG	2 cut(s)	407, 1648
CciI	TCATGA	1 cut(s)	777
CfoI	GCGC	2 cut(s)	7, 888
Cfr10I	RCCGGY	1 cut(s)	370
Cfr13I	GGNCC	5 cut(s)	101, 1269, 1463, 1610, 1645
CseI	GACGC	1 cut(s)	674
Csp6I	GTAC	4 cut(s)	353, 597, 1028, 1997
CviQI	GTAC	4 cut(s)	353, 597, 1028, 1997
DdeI	CTNAG	3 cut(s)	294, 498, 2006
DraI	TTTAAA	1 cut(s)	892
EaeI	YGGCCR	1 cut(s)	1620
Eco105I	TACGTA	1 cut(s)	1996
Eco130I	CCWWGG	4 cut(s)	421, 1031, 1052, 1755
Eco147I	AGGCCT	1 cut(s)	1123
Eco32I	GATATC	1 cut(s)	726
Eco47I	GGWCC	2 cut(s)	1610, 1645
Eco57I	CTGAAG	4 cut(s)	538, 1019, 1257, 1494
Eco88I	CYCGRG	1 cut(s)	1273
EcoO109I	RGGNCCY	3 cut(s)	101, 1610, 1645
EcoRII	CCWGG	4 cut(s)	124, 812, 1257, 1647
EcoRV	GATATC	1 cut(s)	726
EcoT14I	CCWWGG	4 cut(s)	421, 1031, 1052, 1755
EcoT22I	ATGCAT	2 cut(s)	637, 744
ErhI	CCWWGG	4 cut(s)	421, 1031, 1052, 1755
FalI	AAGNNNNNCTT	4 cut(s)	536, 568, 1851, 1883
FauNDI	CATATG	2 cut(s)	159, 1764
FbaI	TGATCA	2 cut(s)	1639, 1936
FblI	GTMKAC	2 cut(s)	74, 1418
Fnu4HI	GCNGC	4 cut(s)	1297, 1300, 1623, 1626
FokI	GGATG	3 cut(s)	125, 603, 1025
Fsp4HI	GCNGC	4 cut(s)	1297, 1300, 1623, 1626
FspBI	CTAG	4 cut(s)	729, 1308, 1428, 1455
GlaI	GCGC	2 cut(s)	6, 887
GluI	GCNGC	4 cut(s)	1297, 1300, 1623, 1626
GsuI	CTGGAG	1 cut(s)	147
HaeIII	GGCC	7 cut(s)	103, 1036, 1123, 1270, 1339, 1464, 1622
HapII	CCGG	6 cut(s)	371, 920, 1037, 1466, 1564, 1957
HgaI	GACGC	1 cut(s)	674
HhaI	GCGC	2 cut(s)	7, 888
Hin1I	GRCGYC	1 cut(s)	685
Hin6I	GCGC	2 cut(s)	5, 886
HinP1I	GCGC	2 cut(s)	5, 886
HincII	GTYRAC	3 cut(s)	250, 563, 698
HindII	GTYRAC	3 cut(s)	250, 563, 698
HpaI	GTTAAC	1 cut(s)	250
HpaII	CCGG	6 cut(s)	371, 920, 1037, 1466, 1564, 1957
HphI	GGTGA	4 cut(s)	641, 909, 1167, 1366
Hpy166II	GTNNAC	9 cut(s)	75, 250, 329, 353, 563, 698, 1419, 1584, 1795
Hpy188III	TCNNGA	8 cut(s)	188, 341, 500, 778, 851, 1643, 1708, 2045
Hpy8I	GTNNAC	9 cut(s)	75, 250, 329, 353, 563, 698, 1419, 1584, 1795
HpyAV	CCTTC	6 cut(s)	234, 723, 994, 1350, 1455, 1804
HpyCH4III	ACNGT	5 cut(s)	1027, 1132, 1591, 1735, 1963
HpyCH4IV	ACGT	1 cut(s)	1995
HpyF10VI	GCNNNNNNNGC	7 cut(s)	632, 770, 1254, 1276, 1296, 1308, 1477
HpyF3I	CTNAG	3 cut(s)	294, 498, 2006
HpySE526I	ACGT	1 cut(s)	1995
Hsp92I	GRCGYC	1 cut(s)	685
HspAI	GCGC	2 cut(s)	5, 886
Ksp22I	TGATCA	2 cut(s)	1639, 1936
KspAI	GTTAAC	1 cut(s)	250
Lsp1109I	GCAGC	3 cut(s)	1308, 1311, 1612
LweI	GCATC	9 cut(s)	185, 622, 751, 1341, 1637, 1668, 1686, 1911, 1992
MaeI	CTAG	4 cut(s)	729, 1308, 1428, 1455
MaeII	ACGT	1 cut(s)	1995
MaeIII	GTNAC	1 cut(s)	604
MfeI	CAATTG	1 cut(s)	1167
MflI	RGATCY	5 cut(s)	231, 517, 1317, 1727, 1745
MhlI	GDGCHC	1 cut(s)	120
MlyI	GAGTC	5 cut(s)	29, 697, 908, 1376, 1511
MmeI	TCCRAC	3 cut(s)	518, 814, 1818
Mph1103I	ATGCAT	2 cut(s)	637, 744
MseI	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1367, 1830
MslI	CAYNNNNRTG	4 cut(s)	453, 528, 1757, 2038
MspA1I	CMGCKG	2 cut(s)	1480, 1625
MspI	CCGG	6 cut(s)	371, 920, 1037, 1466, 1564, 1957
MspR9I	CCNGG	6 cut(s)	126, 814, 1259, 1466, 1565, 1649
MunI	CAATTG	1 cut(s)	1167
MvaI	CCWGG	4 cut(s)	126, 814, 1259, 1649
MwoI	GCNNNNNNNGC	7 cut(s)	632, 770, 1254, 1276, 1296, 1308, 1477
NciI	CCSGG	2 cut(s)	1466, 1565
NcoI	CCATGG	1 cut(s)	421
NdeI	CATATG	2 cut(s)	159, 1764
NlaIV	GGNNCC	3 cut(s)	1271, 1603, 1729
NmuCI	GTSAC	1 cut(s)	604
NsiI	ATGCAT	2 cut(s)	637, 744
NspI	RCATGY	3 cut(s)	452, 886, 1022
NspV	TTCGAA	2 cut(s)	227, 442
OliI	CACNNNNGTG	1 cut(s)	1757
PaeI	GCATGC	2 cut(s)	452, 886
PagI	TCATGA	1 cut(s)	777
PceI	AGGCCT	1 cut(s)	1123
PfeI	GAWTC	5 cut(s)	196, 314, 394, 930, 980
PflMI	CCANNNNNTGG	1 cut(s)	591
PfoI	TCCNGGA	2 cut(s)	124, 1563
PkrI	GCNGC	4 cut(s)	1298, 1301, 1624, 1627
PleI	GAGTC	5 cut(s)	28, 697, 908, 1376, 1510
PpsI	GAGTC	5 cut(s)	28, 697, 908, 1376, 1510
Ppu21I	YACGTR	1 cut(s)	1996
PpuMI	RGGWCCY	2 cut(s)	1610, 1645
PshBI	ATTAAT	1 cut(s)	1830
Psp5II	RGGWCCY	2 cut(s)	1610, 1645
Psp6I	CCWGG	4 cut(s)	124, 812, 1257, 1647
PspGI	CCWGG	4 cut(s)	124, 812, 1257, 1647
PspN4I	GGNNCC	3 cut(s)	1271, 1603, 1729
PspPI	GGNCC	5 cut(s)	101, 1269, 1463, 1610, 1645
PspPPI	RGGWCCY	2 cut(s)	1610, 1645
PsrI	GAACNNNNNNTAC	2 cut(s)	1065, 1097
PstNI	CAGNNNCTG	2 cut(s)	407, 1648
PsuI	RGATCY	5 cut(s)	231, 517, 1317, 1727, 1745
PvuII	CAGCTG	1 cut(s)	1480
RsaI	GTAC	4 cut(s)	354, 598, 1029, 1998
RsaNI	GTAC	4 cut(s)	353, 597, 1028, 1997
RseI	CAYNNNNRTG	4 cut(s)	453, 528, 1757, 2038
SaqAI	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1367, 1830
SatI	GCNGC	4 cut(s)	1297, 1300, 1623, 1626
Sau96I	GGNCC	5 cut(s)	101, 1269, 1463, 1610, 1645
SchI	GAGTC	5 cut(s)	29, 697, 908, 1376, 1511
ScrFI	CCNGG	6 cut(s)	126, 814, 1259, 1466, 1565, 1649
SduI	GDGCHC	1 cut(s)	120
SfaNI	GCATC	9 cut(s)	185, 622, 751, 1341, 1637, 1668, 1686, 1911, 1992
SfcI	CTRYAG	1 cut(s)	942
SfuI	TTCGAA	2 cut(s)	227, 442
SinI	GGWCC	2 cut(s)	1610, 1645
SmiMI	CAYNNNNRTG	4 cut(s)	453, 528, 1757, 2038
SmlI	CTYRAG	1 cut(s)	1312
SmoI	CTYRAG	1 cut(s)	1312
SnaBI	TACGTA	1 cut(s)	1996
SphI	GCATGC	2 cut(s)	452, 886
SseBI	AGGCCT	1 cut(s)	1123
SsiI	CCGC	3 cut(s)	149, 200, 1623
SspMI	CTAG	4 cut(s)	729, 1308, 1428, 1455
StuI	AGGCCT	1 cut(s)	1123
StyD4I	CCNGG	6 cut(s)	124, 812, 1257, 1464, 1563, 1647
StyI	CCWWGG	4 cut(s)	421, 1031, 1052, 1755
TaaI	ACNGT	5 cut(s)	1027, 1132, 1591, 1735, 1963
TaiI	ACGT	1 cut(s)	1998
TaqI	TCGA	4 cut(s)	227, 442, 1209, 1707
TatI	WGTACW	1 cut(s)	596
TauI	GCSGC	1 cut(s)	1625
TfiI	GAWTC	5 cut(s)	196, 314, 394, 930, 980
Tru1I	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1367, 1830
Tru9I	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1367, 1830
TscAI	CASTG	6 cut(s)	726, 940, 977, 1234, 1596, 1738
TseFI	GTSAC	1 cut(s)	604
TseI	GCWGC	3 cut(s)	1296, 1299, 1625
Tsp45I	GTSAC	1 cut(s)	604
TspDTI	ATGAA	6 cut(s)	15, 494, 512, 705, 1029, 1134
TspGWI	ACGGA	1 cut(s)	1074
TspRI	CASTG	6 cut(s)	726, 940, 977, 1234, 1596, 1738
Van91I	CCANNNNNTGG	1 cut(s)	591
VpaK11BI	GGWCC	2 cut(s)	1610, 1645
VspI	ATTAAT	1 cut(s)	1830
XapI	RAATTY	3 cut(s)	539, 1653, 2026
XceI	RCATGY	3 cut(s)	452, 886, 1022
XcmI	CCANNNNNNNNNTGG	2 cut(s)	830, 1881
XmiI	GTMKAC	2 cut(s)	74, 1418
XspI	CTAG	4 cut(s)	729, 1308, 1428, 1455
Zsp2I	ATGCAT	2 cut(s)	637, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.