Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0006016

Physical Location & Seq

Genomic Coordinates Reverse (-)

16485560 .. 16489986

Gene Structure 4427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00296430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGGCGCACAGCGAGTGTGACTCTTCATCTATTTCTCGTGCTGCTGCCGATACAGGTTTTGGAGGTGCTTTGTATACAGAGCTATGGAAGTTATGTGCAGGGCCTTTGGTGGATGTGCCCATTCCTGGAGAGAGAGTGTTCTACTTTCCCCAAGGTCATATGGAACAACTGGAAGCATCAACAAATCAAGAACTGAATCCGCAAATCCCTCGGTTTAATATACCTTCGAAGATCCTTTGTCGTGTGGTTAACATTCAATTACTGGCAGAACGAGAAACCGATGAGGTTTATGCTCAGATCACTTTGCACCCAGAATCAGATCAAAGTGAACCTACAAGTCCTGATCCATGTGTACCGGAGCCTCCAAAACCGGCTACTTACTCGTTTTGCAAGATTTTGACAGCTTCTGATACAAGCACCCATGGAGGGTTCTCTGTTCTTCGAAAGCATGCTAATGATTGCTTGCCTCCTTTGGACATGAACCAAGCAACTCCAACTCAGGAATTGGTTGCCAAAGATCTTCATGGGGGTGGTAATGGGGAACTTCGGGTTGGGGTTCGGCGTCTTGCTCGTCAACAGACTCCCATGCCTTCATCAGTGATATCTAGCCAAAGCATGCATCTTGGAGTGCTTGCAACTGCTTCTCATGCTGTCATGACCTCAACTCTCTTTGTTGTCTATTACAAGCCCAGGACAAGCCAATTTATTGTTGGCTTAAACAAATATCTTGAAGCCATCAACAATAAGTTTTCTGTTGGCATGCGCTTTAAAATGCGATTTGAGGGGGAAGACTCACCGGAAAGAAGATTCACTGGCACTATAGTAGGGGTTGGGGATTTATCTCCTCACTGGTCTGAATCTAAATGGCGATCTCTGAAGGTTCAATGGGATGAACATGCTGCAGTACCAAGGCCGGATAGGGTTTCTCCTTGGGAGATAGAGCCATTTGTAGCTTCTGTTCCGTTAAATCTTGCTCAACCAGTTGTAAAGAGCAAAAGGCCTAAAACTGTTGAAATTGCTTCATCTGAAATTACCACCAATTCAACTGCTTCACCTTTCTGGTATCAAGGGTCAAACCAGTCTGTCGAGCCAACTCAATTAGGCAGTGTTGCTGAAGTCCAAAGCTCTGGTAGCCAGGCTGTGTGGCCCCCAAGGCAGAAAGAGAGCAATGGCAGCAGCTACTCTAGCTCAAGGATCTGTGCAGAGGGCATCTGGCCTTCTTCTCCAAAGGTGAATGTCTCTTTAAGCCTTTTTGCAGACTCACAAGAGGGCAACAAGAATGTTTCTATGGGGTCTATGCCACCTAGCTTCCCCTCCCCTCCTTCAAAACCTAGCAATGGCCCGGTGCATGACCAGCTGGAAACAGGGAAAAAGTCTGAGTCTTCTTCAGGTTTTCGGTTGTTTGGTTATGATGTGCCAAACTCAATTACTGCCCGTCTTCGGGAGAGAGAGCCAATGTTTACGACAGTGTGCTGTGGTGCCAAAGGACCTATTCTGGCCGCTGCATCAGAACTTGATCAGGACCTGGATATTTCAAAATTCTCAAAAGAACAGATGCAAGTTGTATCAGAGATGCCACCAATTGAGACACAAAGCAAGCAGGGATCCACTGTTTCAACGAGATCTCGCACCAAGGGGGTTGCTGTTGGTCGTGCTGTGGACTTGACTGCATTGAAGGGTTATGATGATCTAATTAATGAGCTAGAGAAAATGTTTGAGATCAAAGGAGAGCTTCGTCCAGCAAACAAATGGGCAGTTGTTTTTACTGATGATGAGAATGACATGATGCTTCTTGGTGATGATCAATGGCAAGATTTTTGCCGGACTGTGAAGAAGATATTTATCTATTCAAGTGATTACGTACAGATGCTAAGACAAGGCAAGCAAAAAAATTCAGCATTAGTGTGTCAGGAGACTGAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

641

Amino Acids

70.58

Weight (kDa)

5.8

Isoelectric Point (pI)

53.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRWD_AD	PF25313	215 - 316	2.9e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	235 - 316	9.5e-37	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46530 AT2G46530 AT2G46530 AT3G61830 AT3G61830
fragaria_vesca	FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840
malus_domestica	MD01G1083400.v1.1 MD07G1152100.v1.1
prunus_persica	Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1
pyrus_communis	pycom07g15010
rosa_chinensis	RchiOBHm_Chr1g0360041
rosa_laevigata	RLG00000027836
rosa_multiflora	Rmu_ssc0000368.1_g000035
rosa_roxburghii	Rroxscaffold_4G00296430
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288600 Rh1BG254100 Rh1CG271600 Rh1DG283200
rosa_wichuraiana	Rw1G025590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1478
AccI	GTMKAC	1 cut(s)	74
AciI	CCGC	2 cut(s)	200, 1500
AclWI	GGATC	5 cut(s)	226, 338, 1202, 1599, 1612
AcoI	YGGCCR	1 cut(s)	1497
AcsI	RAATTY	2 cut(s)	1538, 1891
AcuI	CTGAAG	3 cut(s)	896, 1134, 1371
AcyI	GRCGYC	1 cut(s)	562
AfaI	GTAC	3 cut(s)	354, 906, 1863
AfiI	CCNNNNNNNGG	5 cut(s)	125, 426, 1337, 1440, 1441
AjnI	CCWGG	4 cut(s)	124, 689, 1134, 1524
AjuI	GAANNNNNNNTTGG	2 cut(s)	534, 566
Alw26I	GTCTC	3 cut(s)	1243, 1580, 1907
AlwI	GGATC	5 cut(s)	226, 338, 1202, 1599, 1612
AlwNI	CAGNNNCTG	2 cut(s)	407, 1525
AoxI	GGCC	7 cut(s)	101, 911, 998, 1145, 1214, 1339, 1497
ApeKI	GCWGC	6 cut(s)	41, 44, 899, 1173, 1176, 1502
ApoI	RAATTY	2 cut(s)	1538, 1891
AseI	ATTAAT	1 cut(s)	1695
AspLEI	GCGC	2 cut(s)	7, 765
AspS9I	GGNCC	5 cut(s)	101, 1146, 1340, 1487, 1522
AsuC2I	CCSGG	1 cut(s)	1343
AsuHPI	GGTGA	4 cut(s)	786, 1044, 1243, 1808
AsuII	TTCGAA	2 cut(s)	227, 442
AvaII	GGWCC	2 cut(s)	1487, 1522
BaeGI	GKGCMC	1 cut(s)	120
BamHI	GGATCC	1 cut(s)	1604
BanI	GGYRCC	1 cut(s)	1478
BauI	CACGAG	1 cut(s)	36
BbsI	GAAGAC	3 cut(s)	795, 1374, 1430
BbvI	GCAGC	6 cut(s)	28, 31, 886, 1185, 1188, 1489
BccI	CCATC	1 cut(s)	743
BcgI	CGANNNNNNTGC	2 cut(s)	191, 225
BciT130I	CCWGG	4 cut(s)	126, 691, 1136, 1526
BclI	TGATCA	2 cut(s)	1516, 1801
BcnI	CCSGG	1 cut(s)	1343
BcoDI	GTCTC	3 cut(s)	1243, 1580, 1907
BfaI	CTAG	5 cut(s)	606, 1185, 1305, 1332, 1703
BfmI	CTRYAG	2 cut(s)	819, 900
BglI	GCCNNNNNGGC	1 cut(s)	1153
BglII	AGATCT	2 cut(s)	517, 1622
BisI	GCNGC	7 cut(s)	42, 45, 900, 1174, 1177, 1500, 1503
BlsI	GCNGC	7 cut(s)	43, 46, 901, 1175, 1178, 1501, 1504
Bme1390I	CCNGG	5 cut(s)	126, 691, 1136, 1343, 1526
Bme18I	GGWCC	2 cut(s)	1487, 1522
BmgT120I	GGNCC	5 cut(s)	101, 1146, 1340, 1487, 1522
BmiI	GGNNCC	4 cut(s)	360, 1148, 1480, 1606
BmrFI	CCNGG	5 cut(s)	126, 691, 1136, 1343, 1526
BmsI	GCATC	8 cut(s)	185, 628, 1218, 1514, 1545, 1563, 1776, 1857
BpiI	GAAGAC	3 cut(s)	795, 1374, 1430
BplI	GAGNNNNNCTC	1 cut(s)	37
BpmI	CTGGAG	1 cut(s)	147
Bpu14I	TTCGAA	2 cut(s)	227, 442
BpuEI	CTTGAG	1 cut(s)	1174
BpuMI	CCSGG	1 cut(s)	1343
BsaAI	YACGTR	1 cut(s)	1861
BsaBI	GATNNNNATC	1 cut(s)	1841
BsaHI	GRCGYC	1 cut(s)	562
BsaJI	CCNNGG	8 cut(s)	151, 209, 421, 689, 908, 929, 1151, 1632
BsaWI	WCCGGW	2 cut(s)	355, 796
BsaXI	ACNNNNNCTCC	2 cut(s)	120, 150
Bsc4I	CCNNNNNNNGG	5 cut(s)	125, 426, 1337, 1440, 1441
Bse118I	RCCGGY	1 cut(s)	370
Bse1I	ACTGG	6 cut(s)	174, 267, 817, 854, 980, 1078
Bse3DI	GCAATG	2 cut(s)	1174, 1342
Bse8I	GATNNNNATC	1 cut(s)	1841
BseBI	CCWGG	4 cut(s)	126, 691, 1136, 1526
BseDI	CCNNGG	8 cut(s)	151, 209, 421, 689, 908, 929, 1151, 1632
BseGI	GGATG	2 cut(s)	118, 895
BseJI	GATNNNNATC	1 cut(s)	1841
BseLI	CCNNNNNNNGG	5 cut(s)	125, 426, 1337, 1440, 1441
BseMI	GCAATG	2 cut(s)	1174, 1342
BseMII	CTCAG	3 cut(s)	308, 512, 1368
BseNI	ACTGG	6 cut(s)	174, 267, 817, 854, 980, 1078
BseRI	GAGGAG	1 cut(s)	834
BseSI	GKGCMC	1 cut(s)	120
BseXI	GCAGC	6 cut(s)	28, 31, 886, 1185, 1188, 1489
BsgI	GTGCAG	2 cut(s)	117, 1221
BshFI	GGCC	7 cut(s)	103, 913, 1000, 1147, 1216, 1341, 1499
BshNI	GGYRCC	1 cut(s)	1478
BsiSI	CCGG	6 cut(s)	356, 371, 797, 914, 1343, 1822
BslI	CCNNNNNNNGG	5 cut(s)	125, 426, 1337, 1440, 1441
BsmAI	GTCTC	3 cut(s)	1243, 1580, 1907
BsnI	GGCC	7 cut(s)	103, 913, 1000, 1147, 1216, 1341, 1499
Bsp119I	TTCGAA	2 cut(s)	227, 442
Bsp1286I	GDGCHC	1 cut(s)	120
Bsp19I	CCATGG	1 cut(s)	421
BspACI	CCGC	2 cut(s)	200, 1500
BspANI	GGCC	7 cut(s)	103, 913, 1000, 1147, 1216, 1341, 1499
BspCNI	CTCAG	3 cut(s)	307, 511, 1369
BspHI	TCATGA	1 cut(s)	654
BspLI	GGNNCC	4 cut(s)	360, 1148, 1480, 1606
BspMAI	CTGCAG	1 cut(s)	904
BspPI	GGATC	5 cut(s)	226, 338, 1202, 1599, 1612
BspT104I	TTCGAA	2 cut(s)	227, 442
BspT107I	GGYRCC	1 cut(s)	1478
BsrDI	GCAATG	2 cut(s)	1174, 1342
BsrFI	RCCGGY	1 cut(s)	370
BsrI	ACTGG	6 cut(s)	174, 267, 817, 854, 980, 1078
BssAI	RCCGGY	1 cut(s)	370
BssECI	CCNNGG	8 cut(s)	151, 209, 421, 689, 908, 929, 1151, 1632
BssNAI	GTATAC	1 cut(s)	75
BssNI	GRCGYC	1 cut(s)	562
BssSI	CACGAG	1 cut(s)	36
BssT1I	CCWWGG	6 cut(s)	151, 421, 908, 929, 1151, 1632
Bst1107I	GTATAC	1 cut(s)	75
Bst2BI	CACGAG	1 cut(s)	36
Bst2UI	CCWGG	4 cut(s)	126, 691, 1136, 1526
Bst4CI	ACNGT	4 cut(s)	1009, 1468, 1612, 1828
Bst6I	CTCTTC	1 cut(s)	28
BstACI	GRCGYC	1 cut(s)	562
BstBAI	YACGTR	1 cut(s)	1861
BstBI	TTCGAA	2 cut(s)	227, 442
BstC8I	GCNNGC	7 cut(s)	450, 464, 617, 633, 761, 1598, 1883
BstDEI	CTNAG	4 cut(s)	294, 498, 1377, 1871
BstDSI	CCRYGG	1 cut(s)	421
BstF5I	GGATG	2 cut(s)	118, 895
BstHHI	GCGC	2 cut(s)	7, 765
BstMAI	GTCTC	3 cut(s)	1243, 1580, 1907
BstMWI	GCNNNNNNNGC	6 cut(s)	647, 1131, 1153, 1173, 1185, 1354
BstNI	CCWGG	4 cut(s)	126, 691, 1136, 1526
BstNSI	RCATGY	4 cut(s)	452, 619, 763, 899
BstSCI	CCNGG	5 cut(s)	124, 689, 1134, 1341, 1524
BstSFI	CTRYAG	2 cut(s)	819, 900
BstSLI	GKGCMC	1 cut(s)	120
BstSNI	TACGTA	1 cut(s)	1861
BstV1I	GCAGC	6 cut(s)	28, 31, 886, 1185, 1188, 1489
BstV2I	GAAGAC	3 cut(s)	795, 1374, 1430
BstX2I	RGATCY	5 cut(s)	231, 517, 1194, 1604, 1622
BstXI	CCANNNNNNTGG	1 cut(s)	1127
BstYI	RGATCY	5 cut(s)	231, 517, 1194, 1604, 1622
BstZ17I	GTATAC	1 cut(s)	75
BsuRI	GGCC	7 cut(s)	103, 913, 1000, 1147, 1216, 1341, 1499
BtgI	CCRYGG	1 cut(s)	421
BtsCI	GGATG	2 cut(s)	118, 895
BtsI	GCAGTG	1 cut(s)	1111
BtsIMutI	CAGTG	6 cut(s)	603, 810, 847, 1111, 1473, 1608
Cac8I	GCNNGC	7 cut(s)	450, 464, 617, 633, 761, 1598, 1883
CaiI	CAGNNNCTG	2 cut(s)	407, 1525
CciI	TCATGA	1 cut(s)	654
CfoI	GCGC	2 cut(s)	7, 765
Cfr10I	RCCGGY	1 cut(s)	370
Cfr13I	GGNCC	5 cut(s)	101, 1146, 1340, 1487, 1522
CseI	GACGC	1 cut(s)	551
Csp6I	GTAC	3 cut(s)	353, 905, 1862
CviQI	GTAC	3 cut(s)	353, 905, 1862
DdeI	CTNAG	4 cut(s)	294, 498, 1377, 1871
DraI	TTTAAA	1 cut(s)	769
EaeI	YGGCCR	1 cut(s)	1497
Eam1104I	CTCTTC	1 cut(s)	28
EarI	CTCTTC	1 cut(s)	28
Eco105I	TACGTA	1 cut(s)	1861
Eco130I	CCWWGG	6 cut(s)	151, 421, 908, 929, 1151, 1632
Eco147I	AGGCCT	1 cut(s)	1000
Eco32I	GATATC	1 cut(s)	603
Eco47I	GGWCC	2 cut(s)	1487, 1522
Eco57I	CTGAAG	3 cut(s)	896, 1134, 1371
EcoO109I	RGGNCCY	3 cut(s)	101, 1487, 1522
EcoRII	CCWGG	4 cut(s)	124, 689, 1134, 1524
EcoRV	GATATC	1 cut(s)	603
EcoT14I	CCWWGG	6 cut(s)	151, 421, 908, 929, 1151, 1632
EcoT22I	ATGCAT	1 cut(s)	621
ErhI	CCWWGG	6 cut(s)	151, 421, 908, 929, 1151, 1632
FalI	AAGNNNNNCTT	2 cut(s)	1716, 1748
FauNDI	CATATG	1 cut(s)	159
FbaI	TGATCA	2 cut(s)	1516, 1801
FblI	GTMKAC	1 cut(s)	74
Fnu4HI	GCNGC	7 cut(s)	42, 45, 900, 1174, 1177, 1500, 1503
FokI	GGATG	2 cut(s)	125, 902
Fsp4HI	GCNGC	7 cut(s)	42, 45, 900, 1174, 1177, 1500, 1503
FspBI	CTAG	5 cut(s)	606, 1185, 1305, 1332, 1703
GlaI	GCGC	2 cut(s)	6, 764
GluI	GCNGC	7 cut(s)	42, 45, 900, 1174, 1177, 1500, 1503
GsuI	CTGGAG	1 cut(s)	147
HaeIII	GGCC	7 cut(s)	103, 913, 1000, 1147, 1216, 1341, 1499
HapII	CCGG	6 cut(s)	356, 371, 797, 914, 1343, 1822
HgaI	GACGC	1 cut(s)	551
HhaI	GCGC	2 cut(s)	7, 765
Hin1I	GRCGYC	1 cut(s)	562
Hin6I	GCGC	2 cut(s)	5, 763
HinP1I	GCGC	2 cut(s)	5, 763
HincII	GTYRAC	2 cut(s)	250, 575
HindII	GTYRAC	2 cut(s)	250, 575
HinfI	GANTC	9 cut(s)	20, 196, 314, 580, 791, 807, 857, 1259, 1379
HpaI	GTTAAC	1 cut(s)	250
HpaII	CCGG	6 cut(s)	356, 371, 797, 914, 1343, 1822
HphI	GGTGA	4 cut(s)	786, 1044, 1243, 1808
Hpy166II	GTNNAC	7 cut(s)	75, 250, 329, 353, 575, 1461, 1660
Hpy188I	TCNGA	9 cut(s)	297, 319, 409, 856, 876, 1027, 1378, 1510, 1570
Hpy188III	TCNNGA	8 cut(s)	188, 341, 500, 655, 728, 1442, 1520, 1910
Hpy8I	GTNNAC	7 cut(s)	75, 250, 329, 353, 575, 1461, 1660
HpyAV	CCTTC	6 cut(s)	234, 600, 871, 1227, 1332, 1669
HpyCH4III	ACNGT	4 cut(s)	1009, 1468, 1612, 1828
HpyCH4IV	ACGT	1 cut(s)	1860
HpyF10VI	GCNNNNNNNGC	6 cut(s)	647, 1131, 1153, 1173, 1185, 1354
HpyF3I	CTNAG	4 cut(s)	294, 498, 1377, 1871
HpySE526I	ACGT	1 cut(s)	1860
Hsp92I	GRCGYC	1 cut(s)	562
HspAI	GCGC	2 cut(s)	5, 763
Ksp22I	TGATCA	2 cut(s)	1516, 1801
KspAI	GTTAAC	1 cut(s)	250
LmnI	GCTCC	1 cut(s)	358
Lsp1109I	GCAGC	6 cut(s)	28, 31, 886, 1185, 1188, 1489
LweI	GCATC	8 cut(s)	185, 628, 1218, 1514, 1545, 1563, 1776, 1857
MaeI	CTAG	5 cut(s)	606, 1185, 1305, 1332, 1703
MaeII	ACGT	1 cut(s)	1860
MaeIII	GTNAC	1 cut(s)	17
MfeI	CAATTG	1 cut(s)	1581
MflI	RGATCY	5 cut(s)	231, 517, 1194, 1604, 1622
MhlI	GDGCHC	1 cut(s)	120
MlyI	GAGTC	5 cut(s)	14, 574, 785, 1253, 1388
MmeI	TCCRAC	1 cut(s)	518
Mph1103I	ATGCAT	1 cut(s)	621
MseI	TTAA	7 cut(s)	216, 249, 716, 768, 965, 1244, 1695
MslI	CAYNNNNRTG	3 cut(s)	453, 528, 1903
MspA1I	CMGCKG	2 cut(s)	1357, 1502
MspI	CCGG	6 cut(s)	356, 371, 797, 914, 1343, 1822
MspR9I	CCNGG	5 cut(s)	126, 691, 1136, 1343, 1526
MunI	CAATTG	1 cut(s)	1581
MvaI	CCWGG	4 cut(s)	126, 691, 1136, 1526
MwoI	GCNNNNNNNGC	6 cut(s)	647, 1131, 1153, 1173, 1185, 1354
NciI	CCSGG	1 cut(s)	1343
NcoI	CCATGG	1 cut(s)	421
NdeI	CATATG	1 cut(s)	159
NlaIV	GGNNCC	4 cut(s)	360, 1148, 1480, 1606
NmuCI	GTSAC	1 cut(s)	17
NsiI	ATGCAT	1 cut(s)	621
NspI	RCATGY	4 cut(s)	452, 619, 763, 899
NspV	TTCGAA	2 cut(s)	227, 442
PaeI	GCATGC	3 cut(s)	452, 619, 763
PagI	TCATGA	1 cut(s)	654
PceI	AGGCCT	1 cut(s)	1000
PfeI	GAWTC	4 cut(s)	196, 314, 807, 857
PfoI	TCCNGGA	1 cut(s)	124
PkrI	GCNGC	7 cut(s)	43, 46, 901, 1175, 1178, 1501, 1504
PleI	GAGTC	5 cut(s)	14, 574, 785, 1253, 1387
PpsI	GAGTC	5 cut(s)	14, 574, 785, 1253, 1387
Ppu21I	YACGTR	1 cut(s)	1861
PpuMI	RGGWCCY	2 cut(s)	1487, 1522
PshBI	ATTAAT	1 cut(s)	1695
Psp5II	RGGWCCY	2 cut(s)	1487, 1522
Psp6I	CCWGG	4 cut(s)	124, 689, 1134, 1524
PspGI	CCWGG	4 cut(s)	124, 689, 1134, 1524
PspN4I	GGNNCC	4 cut(s)	360, 1148, 1480, 1606
PspPI	GGNCC	5 cut(s)	101, 1146, 1340, 1487, 1522
PspPPI	RGGWCCY	2 cut(s)	1487, 1522
PsrI	GAACNNNNNNTAC	2 cut(s)	942, 974
PstI	CTGCAG	1 cut(s)	904
PstNI	CAGNNNCTG	2 cut(s)	407, 1525
PsuI	RGATCY	5 cut(s)	231, 517, 1194, 1604, 1622
PvuII	CAGCTG	1 cut(s)	1357
RsaI	GTAC	3 cut(s)	354, 906, 1863
RsaNI	GTAC	3 cut(s)	353, 905, 1862
RseI	CAYNNNNRTG	3 cut(s)	453, 528, 1903
SaqAI	TTAA	7 cut(s)	216, 249, 716, 768, 965, 1244, 1695
SatI	GCNGC	7 cut(s)	42, 45, 900, 1174, 1177, 1500, 1503
Sau96I	GGNCC	5 cut(s)	101, 1146, 1340, 1487, 1522
SchI	GAGTC	5 cut(s)	14, 574, 785, 1253, 1388
ScrFI	CCNGG	5 cut(s)	126, 691, 1136, 1343, 1526
SduI	GDGCHC	1 cut(s)	120
SfaNI	GCATC	8 cut(s)	185, 628, 1218, 1514, 1545, 1563, 1776, 1857
SfcI	CTRYAG	2 cut(s)	819, 900
SfuI	TTCGAA	2 cut(s)	227, 442
SinI	GGWCC	2 cut(s)	1487, 1522
SmiMI	CAYNNNNRTG	3 cut(s)	453, 528, 1903
SmlI	CTYRAG	1 cut(s)	1189
SmoI	CTYRAG	1 cut(s)	1189
SnaBI	TACGTA	1 cut(s)	1861
SphI	GCATGC	3 cut(s)	452, 619, 763
SseBI	AGGCCT	1 cut(s)	1000
SsiI	CCGC	2 cut(s)	200, 1500
SspMI	CTAG	5 cut(s)	606, 1185, 1305, 1332, 1703
StuI	AGGCCT	1 cut(s)	1000
StyD4I	CCNGG	5 cut(s)	124, 689, 1134, 1341, 1524
StyI	CCWWGG	6 cut(s)	151, 421, 908, 929, 1151, 1632
TaaI	ACNGT	4 cut(s)	1009, 1468, 1612, 1828
TaiI	ACGT	1 cut(s)	1863
TaqI	TCGA	3 cut(s)	227, 442, 1086
TauI	GCSGC	1 cut(s)	1502
TfiI	GAWTC	4 cut(s)	196, 314, 807, 857
Tru1I	TTAA	7 cut(s)	216, 249, 716, 768, 965, 1244, 1695
Tru9I	TTAA	7 cut(s)	216, 249, 716, 768, 965, 1244, 1695
TscAI	CASTG	6 cut(s)	603, 817, 854, 1111, 1473, 1615
TseFI	GTSAC	1 cut(s)	17
TseI	GCWGC	6 cut(s)	41, 44, 899, 1173, 1176, 1502
Tsp45I	GTSAC	1 cut(s)	17
TspDTI	ATGAA	6 cut(s)	15, 494, 512, 582, 906, 1011
TspGWI	ACGGA	1 cut(s)	951
TspRI	CASTG	6 cut(s)	603, 817, 854, 1111, 1473, 1615
VpaK11BI	GGWCC	2 cut(s)	1487, 1522
VspI	ATTAAT	1 cut(s)	1695
XapI	RAATTY	2 cut(s)	1538, 1891
XceI	RCATGY	4 cut(s)	452, 619, 763, 899
XcmI	CCANNNNNNNNNTGG	2 cut(s)	707, 1746
XmiI	GTMKAC	1 cut(s)	74
XspI	CTAG	5 cut(s)	606, 1185, 1305, 1332, 1703
Zsp2I	ATGCAT	1 cut(s)	621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.