Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0006016

Physical Location & Seq

Genomic Coordinates Forward (+)

53826260 .. 53831730

Gene Structure 5471 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG271600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGCGCACAGCGAGTGTGACTCTTCATCTATTTCTCGTGCTACTGCCGATACAGGTTTTGGAGGTGCTTTGTATACAGAGCTATGGAAGTTATGTGCAGGGCCTCTGGTGGATGTGCCCAGTCCTGGAGAGAGAGTGTTCTACTTTCCCCAGGGTCATATGGAACAACTGGAAGCATCAACAAATCAAGAACTGAATCCGCAAATCCCTCGGTTTAATATACCTTCGAAGATCCTTTGTCGTGTGGTTAACATTCAATTACTGGCAGAACGAGAAACCGATGAGGTTTATGCTCAGATCACTTTGCACCCAGAATCAGATCAAAGTGAACCTACAAGTCCTGATCCATGTGTACCGGAGCCTCCAAAACCGGCTACTTACTCGTTTTGCAAGATTTTGACAGCTTCTGATACAAGCACCCATGGAGGGTTCTCTGTTCTTCGAAAGCATGCTAATGATTGCTTGCCTCCTTTGGACATGAACCAAGCAACTCCAACTCAGGAATTGGTTGCTAAAGATCTTCATGGGTATGAGTGGAAATTTAAGCATATCTTCAGAGGTCAACCGCGGAGGCATTTACTTACCACAGGATGGAGTACATTTGTCACTTCCAAAAGATTGGTTGCTGGTGATGCATTTGTGTTTTTGAGGGGTGGTAATGGGGAACTACGGGTTGGGGTTCGGCGTCTTGCTCGTCAACAGACTCCCATGCCTTCATCAGTGATATCTAGCCAAAGTATGCATCTTGGAGTGCTTGCAACTGCTTCTCATGCTGTCATGACCTCAACTCTCTTTGTTGTCTATTACAAGCCCAGGACAAGCCAATTTATTGTTGGCTTAAACAAATATCTTGAAGCCATCAACAATAAGTTTTCTGTTGGCATGCGCTTTAAAATGCGATTTGAGGGGGAAGACTCACCGGAAAGAAGATTCACTGGCACTATAGTAGGGGTTGGGGATTTATCTCCTCACTGGTCTGAATCTAAATGGCGATCTCTGAAGGTTCAATGGGATGAACATGCCACAGTACCAAGGCCGGATAGGGTTTCTCCTTGGGAGATAGAGCCATTTGTAGCTTCTGTTCCGTTAAATCTTGCTCAACAAGTAGTAAAGAGCAAAAGGCCTAAAACTGTTGAAATTGCTTCATCTGAAATCACCACCAATTCAACTGCTTCACCTTTCTGGTATCCAAACCAGTCTGTCGAGCCAACTCAATTAGGCAGTGTTGCTGAAGTCCAAAGCTCTGGTAGCCAGGCTGTGTGGCCCCCGAGGCAGAAAGAGAGCAATGGCAGCAGCTACTCTAGCTCAAGGATCTGTGCAGAGGGCATCTGGCCTTCTTCTCCAAAGGTGAATGTCTCTTTAAGCCTTTTTGCAGACTCACAAGAGGGCAACAAGAATGTTTCTATGGGGTCTACGCCACCTAGCTTCCCCTCCCCTCCTTCAAAACCTAGCAATGGCCCGGTGCATGACCAGCTGGAAAGAGGGAAAAAGTCTGAGTCTTCAGGTTTTCGGTTGTTTGGTTATGATGTGCCAAACTCAATTACTGCCCGTTTCCGGGAGAGAGAGCCAATGTTTACGACAGTGTGCTGTGGTGCCAAAGGACCTATTCTGGCCGCTGCATCAGAACTTGATCAGGACCTGGATATTTCAAAAATCTCAAAAGAACAGATGCAAGTTGTATCAGAGATGCCACCAATTGAGACACAAAGCAAGCAGGGATCCACTGTTTCAACGAGATCTCGCACCAAGGTGCATATGCAGGGGGTTGCTGTTGGTCGTGCTGTGGACTTGACTGCATTGAAGGGTTATGATGATCTAATTAATGAGTTAGAGAAAATGTTTGAGATCAAAGGAGAGCTTCGTCCAGCAAACAAATGGGCAGTTGTTTTTACTGATGATGAGAATGACATGATGCTTCTTGGGGATGATCAATGGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

646

Amino Acids

71.49

Weight (kDa)

6.43

Isoelectric Point (pI)

52.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	129 - 229	1.7e-22	B3 DNA binding domain
BRWD_AD	PF25313	256 - 357	2.2e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	276 - 357	9.3e-37	Auxin response factor ancillary domain
AUX_IAA	PF02309	568 - 615	1.9e-06	AUX/IAA family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46530 AT2G46530 AT2G46530 AT3G61830 AT3G61830
fragaria_vesca	FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840 FvH4_7g16840
malus_domestica	MD01G1083400.v1.1 MD07G1152100.v1.1
prunus_persica	Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1 Prupe.2G190400_v2.0.a1
pyrus_communis	pycom07g15010
rosa_chinensis	RchiOBHm_Chr1g0360041
rosa_laevigata	RLG00000027836
rosa_multiflora	Rmu_ssc0000368.1_g000035
rosa_roxburghii	Rroxscaffold_4G00296430
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288600 Rh1BG254100 Rh1CG271600 Rh1DG283200
rosa_wichuraiana	Rw1G025590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1592
AccB7I	CCANNNNNTGG	1 cut(s)	591
AccI	GTMKAC	2 cut(s)	74, 1412
AccII	CGCG	1 cut(s)	568
AciI	CCGC	4 cut(s)	200, 566, 568, 1614
AclWI	GGATC	5 cut(s)	226, 338, 1319, 1713, 1726
AcoI	YGGCCR	1 cut(s)	1611
AcsI	RAATTY	1 cut(s)	539
AcuI	CTGAAG	4 cut(s)	538, 1019, 1251, 1485
AcyI	GRCGYC	1 cut(s)	685
AfaI	GTAC	3 cut(s)	354, 598, 1029
AfiI	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1454, 1554, 1555
AgsI	TTSAA	9 cut(s)	257, 854, 1007, 1136, 1167, 1443, 1650, 1731, 1801
AjnI	CCWGG	5 cut(s)	124, 150, 812, 1251, 1638
AjuI	GAANNNNNNNTTGG	2 cut(s)	657, 689
AleI	CACNNNNGTG	1 cut(s)	1748
AluBI	AGCT	9 cut(s)	82, 404, 1076, 1242, 1296, 1305, 1425, 1474, 1858
AluI	AGCT	9 cut(s)	82, 404, 1076, 1242, 1296, 1305, 1425, 1474, 1858
Alw26I	GTCTC	2 cut(s)	1360, 1694
AlwI	GGATC	5 cut(s)	226, 338, 1319, 1713, 1726
AlwNI	CAGNNNCTG	2 cut(s)	407, 1639
Ama87I	CYCGRG	1 cut(s)	1267
AoxI	GGCC	7 cut(s)	101, 1034, 1121, 1262, 1331, 1456, 1611
ApeKI	GCWGC	3 cut(s)	1290, 1293, 1616
ApoI	RAATTY	1 cut(s)	539
AseI	ATTAAT	1 cut(s)	1821
AspLEI	GCGC	2 cut(s)	7, 888
AspS9I	GGNCC	5 cut(s)	101, 1263, 1457, 1601, 1636
AsuC2I	CCSGG	2 cut(s)	1460, 1556
AsuHPI	GGTGA	5 cut(s)	641, 909, 1147, 1167, 1360
AsuII	TTCGAA	2 cut(s)	227, 442
AvaI	CYCGRG	1 cut(s)	1267
AvaII	GGWCC	2 cut(s)	1601, 1636
BaeGI	GKGCMC	1 cut(s)	120
BamHI	GGATCC	1 cut(s)	1718
BanI	GGYRCC	1 cut(s)	1592
BauI	CACGAG	1 cut(s)	36
BbsI	GAAGAC	2 cut(s)	918, 1491
BbvI	GCAGC	3 cut(s)	1302, 1305, 1603
BccI	CCATC	2 cut(s)	585, 866
BcgI	CGANNNNNNTGC	2 cut(s)	191, 225
BciT130I	CCWGG	5 cut(s)	126, 152, 814, 1253, 1640
BciVI	GTATCC	1 cut(s)	1197
BclI	TGATCA	2 cut(s)	1630, 1927
BcnI	CCSGG	2 cut(s)	1460, 1556
BcoDI	GTCTC	2 cut(s)	1360, 1694
BfaI	CTAG	4 cut(s)	729, 1302, 1422, 1449
BfmI	CTRYAG	1 cut(s)	942
BfuI	GTATCC	1 cut(s)	1197
BglI	GCCNNNNNGGC	1 cut(s)	1270
BglII	AGATCT	2 cut(s)	517, 1736
BisI	GCNGC	4 cut(s)	1291, 1294, 1614, 1617
BlsI	GCNGC	4 cut(s)	1292, 1295, 1615, 1618
Bme1390I	CCNGG	7 cut(s)	126, 152, 814, 1253, 1460, 1556, 1640
Bme18I	GGWCC	2 cut(s)	1601, 1636
BmeT110I	CYCGRG	1 cut(s)	1267
BmgT120I	GGNCC	5 cut(s)	101, 1263, 1457, 1601, 1636
BmiI	GGNNCC	4 cut(s)	360, 1265, 1594, 1720
BmrFI	CCNGG	7 cut(s)	126, 152, 814, 1253, 1460, 1556, 1640
BmrI	ACTGGG	1 cut(s)	114
BmsI	GCATC	8 cut(s)	185, 622, 751, 1335, 1628, 1659, 1677, 1902
BmuI	ACTGGG	1 cut(s)	114
BpiI	GAAGAC	2 cut(s)	918, 1491
BplI	GAGNNNNNCTC	1 cut(s)	37
BpmI	CTGGAG	1 cut(s)	147
Bpu14I	TTCGAA	2 cut(s)	227, 442
BpuEI	CTTGAG	1 cut(s)	1291
BpuMI	CCSGG	2 cut(s)	1460, 1556
BsaHI	GRCGYC	1 cut(s)	685
BsaWI	WCCGGW	2 cut(s)	355, 919
BsaXI	ACNNNNNCTCC	2 cut(s)	120, 150
Bsc4I	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1454, 1554, 1555
Bse118I	RCCGGY	1 cut(s)	370
Bse1I	ACTGG	6 cut(s)	120, 174, 267, 940, 977, 1195
Bse3DI	GCAATG	2 cut(s)	1291, 1459
BseBI	CCWGG	5 cut(s)	126, 152, 814, 1253, 1640
BseGI	GGATG	4 cut(s)	118, 596, 1018, 1930
BseLI	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1454, 1554, 1555
BseMI	GCAATG	2 cut(s)	1291, 1459
BseMII	CTCAG	3 cut(s)	308, 512, 1485
BseNI	ACTGG	6 cut(s)	120, 174, 267, 940, 977, 1195
BseRI	GAGGAG	1 cut(s)	957
BseSI	GKGCMC	1 cut(s)	120
BseXI	GCAGC	3 cut(s)	1302, 1305, 1603
BsgI	GTGCAG	2 cut(s)	117, 1338
Bsh1236I	CGCG	1 cut(s)	568
BshFI	GGCC	7 cut(s)	103, 1036, 1123, 1264, 1333, 1458, 1613
BshNI	GGYRCC	1 cut(s)	1592
BsiHKCI	CYCGRG	1 cut(s)	1267
BsiSI	CCGG	6 cut(s)	356, 371, 920, 1037, 1460, 1555
BslI	CCNNNNNNNGG	6 cut(s)	125, 426, 591, 1454, 1554, 1555
BsmAI	GTCTC	2 cut(s)	1360, 1694
BsnI	GGCC	7 cut(s)	103, 1036, 1123, 1264, 1333, 1458, 1613
BsoBI	CYCGRG	1 cut(s)	1267
Bsp119I	TTCGAA	2 cut(s)	227, 442
Bsp1286I	GDGCHC	1 cut(s)	120
Bsp19I	CCATGG	1 cut(s)	421
BspACI	CCGC	4 cut(s)	200, 566, 568, 1614
BspANI	GGCC	7 cut(s)	103, 1036, 1123, 1264, 1333, 1458, 1613
BspCNI	CTCAG	3 cut(s)	307, 511, 1486
BspFNI	CGCG	1 cut(s)	568
BspHI	TCATGA	1 cut(s)	777
BspLI	GGNNCC	4 cut(s)	360, 1265, 1594, 1720
BspPI	GGATC	5 cut(s)	226, 338, 1319, 1713, 1726
BspT104I	TTCGAA	2 cut(s)	227, 442
BspT107I	GGYRCC	1 cut(s)	1592
BsrDI	GCAATG	2 cut(s)	1291, 1459
BsrFI	RCCGGY	1 cut(s)	370
BsrI	ACTGG	6 cut(s)	120, 174, 267, 940, 977, 1195
BssAI	RCCGGY	1 cut(s)	370
BssNAI	GTATAC	1 cut(s)	75
BssNI	GRCGYC	1 cut(s)	685
BssSI	CACGAG	1 cut(s)	36
BssT1I	CCWWGG	4 cut(s)	421, 1031, 1052, 1746
Bst1107I	GTATAC	1 cut(s)	75
Bst2BI	CACGAG	1 cut(s)	36
Bst2UI	CCWGG	5 cut(s)	126, 152, 814, 1253, 1640
Bst4CI	ACNGT	4 cut(s)	1027, 1132, 1582, 1726
Bst6I	CTCTTC	1 cut(s)	28
BstACI	GRCGYC	1 cut(s)	685
BstBI	TTCGAA	2 cut(s)	227, 442
BstC8I	GCNNGC	5 cut(s)	450, 464, 756, 884, 1712
BstDEI	CTNAG	3 cut(s)	294, 498, 1494
BstDSI	CCRYGG	2 cut(s)	421, 566
BstF5I	GGATG	4 cut(s)	118, 596, 1018, 1930
BstFNI	CGCG	1 cut(s)	568
BstHHI	GCGC	2 cut(s)	7, 888
BstMAI	GTCTC	2 cut(s)	1360, 1694
BstMWI	GCNNNNNNNGC	7 cut(s)	632, 770, 1248, 1270, 1290, 1302, 1471
BstNI	CCWGG	5 cut(s)	126, 152, 814, 1253, 1640
BstNSI	RCATGY	3 cut(s)	452, 886, 1022
BstSCI	CCNGG	7 cut(s)	124, 150, 812, 1251, 1458, 1554, 1638
BstSFI	CTRYAG	1 cut(s)	942
BstSLI	GKGCMC	1 cut(s)	120
BstUI	CGCG	1 cut(s)	568
BstV1I	GCAGC	3 cut(s)	1302, 1305, 1603
BstV2I	GAAGAC	2 cut(s)	918, 1491
BstX2I	RGATCY	5 cut(s)	231, 517, 1311, 1718, 1736
BstXI	CCANNNNNNTGG	2 cut(s)	619, 1244
BstYI	RGATCY	5 cut(s)	231, 517, 1311, 1718, 1736
BstZ17I	GTATAC	1 cut(s)	75
BsuI	GTATCC	1 cut(s)	1197
BsuRI	GGCC	7 cut(s)	103, 1036, 1123, 1264, 1333, 1458, 1613
BtgI	CCRYGG	2 cut(s)	421, 566
BtsCI	GGATG	4 cut(s)	118, 596, 1018, 1930
BtsI	GCAGTG	1 cut(s)	1228
BtsIMutI	CAGTG	6 cut(s)	726, 933, 970, 1228, 1587, 1722
Cac8I	GCNNGC	5 cut(s)	450, 464, 756, 884, 1712
CaiI	CAGNNNCTG	2 cut(s)	407, 1639
CciI	TCATGA	1 cut(s)	777
CfoI	GCGC	2 cut(s)	7, 888
Cfr10I	RCCGGY	1 cut(s)	370
Cfr13I	GGNCC	5 cut(s)	101, 1263, 1457, 1601, 1636
Cfr42I	CCGCGG	1 cut(s)	569
CseI	GACGC	1 cut(s)	674
Csp6I	GTAC	3 cut(s)	353, 597, 1028
CviQI	GTAC	3 cut(s)	353, 597, 1028
DdeI	CTNAG	3 cut(s)	294, 498, 1494
DraI	TTTAAA	1 cut(s)	892
EaeI	YGGCCR	1 cut(s)	1611
Eam1104I	CTCTTC	1 cut(s)	28
EarI	CTCTTC	1 cut(s)	28
Eco130I	CCWWGG	4 cut(s)	421, 1031, 1052, 1746
Eco147I	AGGCCT	1 cut(s)	1123
Eco32I	GATATC	1 cut(s)	726
Eco47I	GGWCC	2 cut(s)	1601, 1636
Eco57I	CTGAAG	4 cut(s)	538, 1019, 1251, 1485
Eco88I	CYCGRG	1 cut(s)	1267
EcoO109I	RGGNCCY	3 cut(s)	101, 1601, 1636
EcoRII	CCWGG	5 cut(s)	124, 150, 812, 1251, 1638
EcoRV	GATATC	1 cut(s)	726
EcoT14I	CCWWGG	4 cut(s)	421, 1031, 1052, 1746
EcoT22I	ATGCAT	2 cut(s)	637, 744
ErhI	CCWWGG	4 cut(s)	421, 1031, 1052, 1746
FalI	AAGNNNNNCTT	4 cut(s)	536, 568, 1842, 1874
FauNDI	CATATG	2 cut(s)	159, 1755
FbaI	TGATCA	2 cut(s)	1630, 1927
FblI	GTMKAC	2 cut(s)	74, 1412
Fnu4HI	GCNGC	4 cut(s)	1291, 1294, 1614, 1617
FokI	GGATG	4 cut(s)	125, 603, 1025, 1937
Fsp4HI	GCNGC	4 cut(s)	1291, 1294, 1614, 1617
FspBI	CTAG	4 cut(s)	729, 1302, 1422, 1449
GlaI	GCGC	2 cut(s)	6, 887
GluI	GCNGC	4 cut(s)	1291, 1294, 1614, 1617
GsuI	CTGGAG	1 cut(s)	147
HaeIII	GGCC	7 cut(s)	103, 1036, 1123, 1264, 1333, 1458, 1613
HapII	CCGG	6 cut(s)	356, 371, 920, 1037, 1460, 1555
HgaI	GACGC	1 cut(s)	674
HhaI	GCGC	2 cut(s)	7, 888
Hin1I	GRCGYC	1 cut(s)	685
Hin6I	GCGC	2 cut(s)	5, 886
HinP1I	GCGC	2 cut(s)	5, 886
HincII	GTYRAC	3 cut(s)	250, 563, 698
HindII	GTYRAC	3 cut(s)	250, 563, 698
HinfI	GANTC	9 cut(s)	20, 196, 314, 703, 914, 930, 980, 1376, 1496
HpaI	GTTAAC	1 cut(s)	250
HpaII	CCGG	6 cut(s)	356, 371, 920, 1037, 1460, 1555
HphI	GGTGA	5 cut(s)	641, 909, 1147, 1167, 1360
Hpy166II	GTNNAC	9 cut(s)	75, 250, 329, 353, 563, 698, 1413, 1575, 1786
Hpy188III	TCNNGA	6 cut(s)	188, 341, 500, 778, 851, 1634
Hpy8I	GTNNAC	9 cut(s)	75, 250, 329, 353, 563, 698, 1413, 1575, 1786
HpyAV	CCTTC	6 cut(s)	234, 723, 994, 1344, 1449, 1795
HpyCH4III	ACNGT	4 cut(s)	1027, 1132, 1582, 1726
HpyF10VI	GCNNNNNNNGC	7 cut(s)	632, 770, 1248, 1270, 1290, 1302, 1471
HpyF3I	CTNAG	3 cut(s)	294, 498, 1494
Hsp92I	GRCGYC	1 cut(s)	685
HspAI	GCGC	2 cut(s)	5, 886
Ksp22I	TGATCA	2 cut(s)	1630, 1927
KspAI	GTTAAC	1 cut(s)	250
KspI	CCGCGG	1 cut(s)	569
LmnI	GCTCC	1 cut(s)	358
Lsp1109I	GCAGC	3 cut(s)	1302, 1305, 1603
LweI	GCATC	8 cut(s)	185, 622, 751, 1335, 1628, 1659, 1677, 1902
MaeI	CTAG	4 cut(s)	729, 1302, 1422, 1449
MaeIII	GTNAC	2 cut(s)	17, 604
MboII	GAAGA	9 cut(s)	15, 241, 431, 512, 544, 923, 939, 1329, 1491
MfeI	CAATTG	1 cut(s)	1695
MflI	RGATCY	5 cut(s)	231, 517, 1311, 1718, 1736
MhlI	GDGCHC	1 cut(s)	120
MlyI	GAGTC	5 cut(s)	14, 697, 908, 1370, 1505
MmeI	TCCRAC	1 cut(s)	518
Mph1103I	ATGCAT	2 cut(s)	637, 744
MseI	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1361, 1821
MslI	CAYNNNNRTG	3 cut(s)	453, 528, 1748
MspA1I	CMGCKG	3 cut(s)	568, 1474, 1616
MspI	CCGG	6 cut(s)	356, 371, 920, 1037, 1460, 1555
MspR9I	CCNGG	7 cut(s)	126, 152, 814, 1253, 1460, 1556, 1640
MunI	CAATTG	1 cut(s)	1695
MvaI	CCWGG	5 cut(s)	126, 152, 814, 1253, 1640
MvnI	CGCG	1 cut(s)	568
MwoI	GCNNNNNNNGC	7 cut(s)	632, 770, 1248, 1270, 1290, 1302, 1471
NciI	CCSGG	2 cut(s)	1460, 1556
NcoI	CCATGG	1 cut(s)	421
NdeI	CATATG	2 cut(s)	159, 1755
NlaIV	GGNNCC	4 cut(s)	360, 1265, 1594, 1720
NmuCI	GTSAC	2 cut(s)	17, 604
NsiI	ATGCAT	2 cut(s)	637, 744
NspI	RCATGY	3 cut(s)	452, 886, 1022
NspV	TTCGAA	2 cut(s)	227, 442
OliI	CACNNNNGTG	1 cut(s)	1748
PaeI	GCATGC	2 cut(s)	452, 886
PagI	TCATGA	1 cut(s)	777
PasI	CCCWGGG	1 cut(s)	151
PceI	AGGCCT	1 cut(s)	1123
PfeI	GAWTC	4 cut(s)	196, 314, 930, 980
PflMI	CCANNNNNTGG	1 cut(s)	591
PfoI	TCCNGGA	2 cut(s)	124, 1554
PkrI	GCNGC	4 cut(s)	1292, 1295, 1615, 1618
PleI	GAGTC	5 cut(s)	14, 697, 908, 1370, 1504
PpsI	GAGTC	5 cut(s)	14, 697, 908, 1370, 1504
PpuMI	RGGWCCY	2 cut(s)	1601, 1636
PshBI	ATTAAT	1 cut(s)	1821
Psp5II	RGGWCCY	2 cut(s)	1601, 1636
Psp6I	CCWGG	5 cut(s)	124, 150, 812, 1251, 1638
PspGI	CCWGG	5 cut(s)	124, 150, 812, 1251, 1638
PspN4I	GGNNCC	4 cut(s)	360, 1265, 1594, 1720
PspPI	GGNCC	5 cut(s)	101, 1263, 1457, 1601, 1636
PspPPI	RGGWCCY	2 cut(s)	1601, 1636
PsrI	GAACNNNNNNTAC	2 cut(s)	1065, 1097
PstNI	CAGNNNCTG	2 cut(s)	407, 1639
PsuI	RGATCY	5 cut(s)	231, 517, 1311, 1718, 1736
PvuII	CAGCTG	1 cut(s)	1474
RsaI	GTAC	3 cut(s)	354, 598, 1029
RsaNI	GTAC	3 cut(s)	353, 597, 1028
RseI	CAYNNNNRTG	3 cut(s)	453, 528, 1748
SacII	CCGCGG	1 cut(s)	569
SaqAI	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1361, 1821
SatI	GCNGC	4 cut(s)	1291, 1294, 1614, 1617
Sau96I	GGNCC	5 cut(s)	101, 1263, 1457, 1601, 1636
SchI	GAGTC	5 cut(s)	14, 697, 908, 1370, 1505
ScrFI	CCNGG	7 cut(s)	126, 152, 814, 1253, 1460, 1556, 1640
SduI	GDGCHC	1 cut(s)	120
SfaNI	GCATC	8 cut(s)	185, 622, 751, 1335, 1628, 1659, 1677, 1902
SfcI	CTRYAG	1 cut(s)	942
Sfr303I	CCGCGG	1 cut(s)	569
SfuI	TTCGAA	2 cut(s)	227, 442
SgrBI	CCGCGG	1 cut(s)	569
SinI	GGWCC	2 cut(s)	1601, 1636
SmiMI	CAYNNNNRTG	3 cut(s)	453, 528, 1748
SmlI	CTYRAG	1 cut(s)	1306
SmoI	CTYRAG	1 cut(s)	1306
SphI	GCATGC	2 cut(s)	452, 886
SseBI	AGGCCT	1 cut(s)	1123
SsiI	CCGC	4 cut(s)	200, 566, 568, 1614
SspMI	CTAG	4 cut(s)	729, 1302, 1422, 1449
StuI	AGGCCT	1 cut(s)	1123
StyD4I	CCNGG	7 cut(s)	124, 150, 812, 1251, 1458, 1554, 1638
StyI	CCWWGG	4 cut(s)	421, 1031, 1052, 1746
TaaI	ACNGT	4 cut(s)	1027, 1132, 1582, 1726
TaqI	TCGA	3 cut(s)	227, 442, 1203
TatI	WGTACW	1 cut(s)	596
TauI	GCSGC	1 cut(s)	1616
TfiI	GAWTC	4 cut(s)	196, 314, 930, 980
Tru1I	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1361, 1821
Tru9I	TTAA	8 cut(s)	216, 249, 543, 839, 891, 1088, 1361, 1821
TscAI	CASTG	6 cut(s)	726, 940, 977, 1228, 1587, 1729
TseFI	GTSAC	2 cut(s)	17, 604
TseI	GCWGC	3 cut(s)	1290, 1293, 1616
Tsp45I	GTSAC	2 cut(s)	17, 604
TspDTI	ATGAA	6 cut(s)	15, 494, 512, 705, 1029, 1134
TspGWI	ACGGA	1 cut(s)	1074
TspRI	CASTG	6 cut(s)	726, 940, 977, 1228, 1587, 1729
Van91I	CCANNNNNTGG	1 cut(s)	591
VpaK11BI	GGWCC	2 cut(s)	1601, 1636
VspI	ATTAAT	1 cut(s)	1821
XapI	RAATTY	1 cut(s)	539
XceI	RCATGY	3 cut(s)	452, 886, 1022
XcmI	CCANNNNNNNNNTGG	2 cut(s)	830, 1872
XmiI	GTMKAC	2 cut(s)	74, 1412
XspI	CTAG	4 cut(s)	729, 1302, 1422, 1449
Zsp2I	ATGCAT	2 cut(s)	637, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.