Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0011252

Physical Location & Seq

Genomic Coordinates Reverse (-)

14579644 .. 14585981

Gene Structure 6338 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g17041.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGCGGACAAGAGAGATCTCCAAACACCCCCCAAGAAGAGATCCAAGTCCTCCCGACCATCATCGGATCCCAAATCCTCATCCCCTTCTCTCCCTCCTACTCCGCTCTCCGCCACTCCCCGCCGATCCACGCGCCGCCGAGCCTCCCTCCACTTTCCGACGCCGCCACCCAAGAAGAGGAAAACCCCCAAATCGACGGCGGAGAAGAAGCAGAAGCAGCAGGTGTTTTACAAGAAGGTGGTGTACGACGGCGGCGAGTTCGAGGTAGGAGATGACGTGTATGTGAAGAGGAGAGAGGATGAGGATGAGGTGGAGGTGCAGGTGGAGGAGCAATGTAGGGTTTGCTTCAAGTCTGGGAAGGCTGTGATGATTGAGTGTGACGATTGTTTGTGTGGATTTCATCTTAAATGCTTGAAGCCTCCTTTAAAGGAGGTTCCCCCAGGAGATTGGGTTTGCGGTTTTTGTGAGGCTCGCAGATTGGGGAAAGAGGTCCAGCTCCCAACACCCCCCAAAGGGAAGAAGCTGGTTAGGACGTTTCGAGAGAAGCTTCTCTCCAGCGACTTGTGGGCTGCCCGCATTGAAAGTATCTGGAAAGAGTTGGATGGTACCTATTGGTGTCGGGTGCGTTGGTATGTAATCCCGGAAGAGACTGAAGCTGGAAGACAACCGCATAATCTCCGGAGGGAGATTTATCGCACAAATGATTCGGCCAACATTGAGATGGAATCGATTCTTCAACACTGTTTTGTAATGAACCCTAGAGAATATGCCAAAGCCAATGAAGGGGATGATGTCTTTTTATGCGAATATGAATATGATATTCACTGGTACAGTTTCAAGCGTCTTGCAGAAATTGATGGTGATAAAGAGGATGATGATGCTGAGAGTGATGAAGATTGGAAACGTGACAAAGACTCAGACTCTGATACTGAAGAAGAAGTTGAGTTTGAAGAAGAGAGCACAAAGAATATACTAGCTAAACCATCTCGAGCTCATGAGTTGGCTGCAAATTCACATAAGGGGCGGTTCTATGGACTTCAAAAAATTGGAATGAAGCAAATCCCTAAGCATGTTAGATGCCATAAGCAGACTGCTCTTGAAAGAGCAAAATCAACACTGCTGTTGGCATCATTGCCCAAGTCTTTACCTTGCAGGGATAAAGAAATGTTGGAGATAAGTGCATTCATCAAGGGTGCCATCTCTGATGATAAATGTCTTGGACGTTGCCTCTATATACATGGTGTTCCGGGAACTGGAAAGACTATGAGTGTACTAGCAGTAATGAGGAATTTGAGGTCTGAAGTTGATGCTGGAAGTATAAGACCTTACTGTTTCATTGAGATAAATGGTCTAAAATTAGCATCACCTGAGAATATCTACAGGGTTATATATGAAGCATTAAGTGGGCATCGAGTTGGTTGGAAAAAGGCTCTCCACTTGCTAAATGAGCGATTTTCAAATGGAAAGAAGTTCGGCAAAGACGATGACAAACCTTGTATTCTTCTTATTGATGAACTTGATCTTCTTGTTACCAGAAACCAATCGGTTCTCTACAACATTCTTGACTGGCCTACTAAGCCAAACTCAAAGTTAGTTGTAATAGGCATAGCAAATACCATGGATCTTCCAGAAAAGTTGCTTCCTCGTATCTCAAGTCGAATGGGAATCCAAAGGCTTTGCTTTGGCCCCTATAATTATAGGCAGCTTCAAGAGATCATTTCAAGTCGGCTTAGAGGAATTGATGCATTTGAAAAACAAGCTATAGAGTTCGCTTCAAGAAAGGTAGCAGCTATTTCTGGAGATGCTCGTCGTGCATTGGAGATATGCAGGCGTGCAGCTGAAATCACAGATTACCGCATAAAGAAGCTAATCTCAACTCCCAAGAATGCTTCTGAAGGAAAAGCACTTGTTGGTATGGCAGAGGTTGAAGCAGCCATACAAGAGATGTTCCAGGCACCTCATATCCAGGTGATGAAAACTTGTTCCAAACTGAGTAAAATCTATTTGACGGCTATGGTATATGAACTCTATAAAACAGGAATGGGTGAAACTACTTTCGAGAAGTTGGCAATGACAGTATATAATCTGTGTACAAGCAATGGAGAAGCATTTCCAGGACATGATATGCTCTTGAAAGTTGGTTGTAAGCTTGGTGAATGCAGAATTATTCTTTGTGAATCAGGAGCAAAGCACAGGTTACAGAAATTACAGCTCAACTTTCCGAGCGATGATGTAGCATTTGCACTGAAGGAAAGCAAGGAATTACCTTGGTTGGCCAAGTATCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005664 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006277 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009059 GO:0009566 GO:0009567 GO:0009889 GO:0009987 GO:0010385 GO:0010468 GO:0010556 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071897 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA BAH PHD

Protein Analysis

763

Amino Acids

86.84

Weight (kDa)

8.76

Isoelectric Point (pI)

51.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	112 - 155	5e-07	PHD-finger
BAH	PF01426	191 - 280	7.2e-11	BAH domain
AAA_16	PF13191	382 - 526	5.6e-07	AAA ATPase domain
AAA_22	PF13401	408 - 532	1.1e-08	AAA domain
AAA	PF00004	411 - 556	1.4e-17	ATPase family associated with various cellular activities (AAA)
Cdc6-ORC-like_ATPase_lid	PF22606	564 - 616	4.3e-08	Cdc6/ORC-like, ATPase lid domain
AAA_lid_10	PF17872	584 - 617	2.7e-10	AAA lid domain
WHD_Cdc6	PF09079	657 - 748	3.8e-08	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12620 AT4G14700
fragaria_vesca	FvH4_7g17041
malus_domestica	MD03G1176600.v1.1 MD11G1197200.v1.1
prunus_persica	Prupe.4G246200_v2.0.a1 Prupe.5G048200_v2.0.a1 Prupe.5G048200_v2.0.a1
pyrus_communis	pycom03g13390
rosa_chinensis	RchiOBHm_Chr3g0490671
rosa_laevigata	RLG00000022877
rosa_multiflora	Rmu_sc0006380.1_g000017 Rmu_sc0012075.1_g000007
rosa_roxburghii	Rroxscaffold_6G00393320
rosa_rugosa	Rorug03G0245400
rosa_samantha	Rh3AG294600 Rh3BG330800 Rh3CG328300 Rh3DG327700
rosa_wichuraiana	Rw3G026040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	211, 310
Acc36I	ACCTGC	2 cut(s)	211, 310
Acc65I	GGTACC	1 cut(s)	605
AccB1I	GGYRCC	3 cut(s)	605, 1193, 1954
AccBSI	CCGCTC	1 cut(s)	106
AccII	CGCG	1 cut(s)	133
AccIII	TCCGGA	1 cut(s)	678
AclWI	GGATC	5 cut(s)	36, 62, 75, 120, 1629
AcoI	YGGCCR	2 cut(s)	708, 2274
AcsI	RAATTY	2 cut(s)	1009, 1288
AcuI	CTGAAG	5 cut(s)	672, 951, 1320, 1914, 2267
AcyI	GRCGYC	1 cut(s)	161
AfaI	GTAC	5 cut(s)	245, 607, 830, 1272, 2092
AfiI	CCNNNNNNNGG	5 cut(s)	177, 512, 513, 783, 1253
AflIII	ACRYGT	1 cut(s)	276
AjiI	CACGTC	1 cut(s)	277
AjnI	CCWGG	4 cut(s)	439, 1950, 1965, 2113
Alw21I	GWGCWC	2 cut(s)	962, 994
Alw26I	GTCTC	1 cut(s)	641
AlwI	GGATC	5 cut(s)	36, 62, 75, 120, 1629
AlwNI	CAGNNNCTG	1 cut(s)	923
Ama87I	CYCGRG	1 cut(s)	987
Aor13HI	TCCGGA	1 cut(s)	678
AoxI	GGCC	4 cut(s)	708, 1568, 1684, 2274
ApeKI	GCWGC	7 cut(s)	217, 569, 1004, 1702, 1787, 1835, 1931
ApoI	RAATTY	2 cut(s)	1009, 1288
Asp700I	GAANNNNTTC	2 cut(s)	729, 2109
Asp718I	GGTACC	1 cut(s)	605
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	2 cut(s)	490, 1685
AsuC2I	CCSGG	2 cut(s)	641, 1248
AsuHPI	GGTGA	5 cut(s)	872, 1356, 1981, 2057, 2165
AvaI	CYCGRG	1 cut(s)	987
AvaII	GGWCC	1 cut(s)	490
BalI	TGGCCA	1 cut(s)	2276
BamHI	GGATCC	1 cut(s)	67
BanI	GGYRCC	3 cut(s)	605, 1193, 1954
BanII	GRGCYC	1 cut(s)	994
BarI	GAAGNNNNNNTAC	4 cut(s)	227, 259, 1920, 1952
BbsI	GAAGAC	1 cut(s)	667
Bbv12I	GWGCWC	2 cut(s)	962, 994
BbvI	GCAGC	7 cut(s)	229, 556, 991, 1714, 1799, 1847, 1943
BccI	CCATC	6 cut(s)	67, 596, 715, 851, 991, 1205
BceAI	ACGGC	3 cut(s)	213, 265, 2025
BciT130I	CCWGG	4 cut(s)	441, 1952, 1967, 2115
BcnI	CCSGG	2 cut(s)	641, 1248
BcoDI	GTCTC	1 cut(s)	641
BfaI	CTAG	3 cut(s)	759, 974, 1274
BfmI	CTRYAG	2 cut(s)	1378, 1761
BfuAI	ACCTGC	2 cut(s)	211, 310
BglII	AGATCT	1 cut(s)	16
Bme1390I	CCNGG	6 cut(s)	441, 641, 1248, 1952, 1967, 2115
Bme18I	GGWCC	1 cut(s)	490
BmeT110I	CYCGRG	1 cut(s)	987
BmgBI	CACGTC	1 cut(s)	277
BmgT120I	GGNCC	2 cut(s)	490, 1685
BmiI	GGNNCC	6 cut(s)	69, 435, 607, 1195, 1687, 1956
BmrFI	CCNGG	6 cut(s)	441, 641, 1248, 1952, 1967, 2115
BmsI	GCATC	8 cut(s)	868, 1067, 1136, 1297, 1370, 1417, 1732, 1792
BpiI	GAAGAC	1 cut(s)	667
BplI	GAGNNNNNCTC	2 cut(s)	132, 164
BpmI	CTGGAG	2 cut(s)	538, 1818
Bpu10I	CCTNAGC	1 cut(s)	1065
BpuEI	CTTGAG	1 cut(s)	1636
BpuMI	CCSGG	2 cut(s)	641, 1248
Bsa29I	ATCGAT	1 cut(s)	728
BsaHI	GRCGYC	1 cut(s)	161
BsaJI	CCNNGG	3 cut(s)	439, 1617, 2267
BsaWI	WCCGGW	1 cut(s)	678
BsaXI	ACNNNNNCTCC	4 cut(s)	261, 291, 435, 465
Bsc4I	CCNNNNNNNGG	5 cut(s)	177, 512, 513, 783, 1253
Bse1I	ACTGG	3 cut(s)	830, 1258, 1571
Bse3DI	GCAATG	4 cut(s)	338, 1130, 2076, 2104
BseAI	TCCGGA	1 cut(s)	678
BseBI	CCWGG	4 cut(s)	441, 1952, 1967, 2115
BseCI	ATCGAT	1 cut(s)	728
BseDI	CCNNGG	3 cut(s)	439, 1617, 2267
BseGI	GGATG	6 cut(s)	80, 304, 310, 607, 793, 877
BseLI	CCNNNNNNNGG	5 cut(s)	177, 512, 513, 783, 1253
BseMI	GCAATG	4 cut(s)	338, 1130, 2076, 2104
BseMII	CTCAG	4 cut(s)	873, 930, 1359, 1982
BseNI	ACTGG	3 cut(s)	830, 1258, 1571
BseRI	GAGGAG	2 cut(s)	304, 341
BseXI	GCAGC	7 cut(s)	229, 556, 991, 1714, 1799, 1847, 1943
BsgI	GTGCAG	2 cut(s)	338, 1854
Bsh1236I	CGCG	1 cut(s)	133
BshFI	GGCC	4 cut(s)	710, 1570, 1686, 2276
BshNI	GGYRCC	3 cut(s)	605, 1193, 1954
BshVI	ATCGAT	1 cut(s)	728
BsiHKAI	GWGCWC	2 cut(s)	962, 994
BsiHKCI	CYCGRG	1 cut(s)	987
BsiSI	CCGG	3 cut(s)	641, 679, 1247
BslI	CCNNNNNNNGG	5 cut(s)	177, 512, 513, 783, 1253
BsmAI	GTCTC	1 cut(s)	641
BsmI	GAATGC	3 cut(s)	1181, 1891, 2162
BsnI	GGCC	4 cut(s)	710, 1570, 1686, 2276
BsoBI	CYCGRG	1 cut(s)	987
Bsp1286I	GDGCHC	2 cut(s)	962, 994
Bsp13I	TCCGGA	1 cut(s)	678
Bsp1407I	TGTACA	1 cut(s)	2090
Bsp143I	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
Bsp19I	CCATGG	1 cut(s)	1617
BspANI	GGCC	4 cut(s)	710, 1570, 1686, 2276
BspCNI	CTCAG	4 cut(s)	874, 929, 1360, 1983
BspDI	ATCGAT	1 cut(s)	728
BspEI	TCCGGA	1 cut(s)	678
BspFNI	CGCG	1 cut(s)	133
BspHI	TCATGA	1 cut(s)	994
BspLI	GGNNCC	6 cut(s)	69, 435, 607, 1195, 1687, 1956
BspMI	ACCTGC	2 cut(s)	211, 310
BspPI	GGATC	5 cut(s)	36, 62, 75, 120, 1629
BspT107I	GGYRCC	3 cut(s)	605, 1193, 1954
BsrBI	CCGCTC	1 cut(s)	106
BsrDI	GCAATG	4 cut(s)	338, 1130, 2076, 2104
BsrGI	TGTACA	1 cut(s)	2090
BsrI	ACTGG	3 cut(s)	830, 1258, 1571
BssECI	CCNNGG	3 cut(s)	439, 1617, 2267
BssMI	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
BssNI	GRCGYC	1 cut(s)	161
BssT1I	CCWWGG	2 cut(s)	1617, 2267
Bst2UI	CCWGG	4 cut(s)	441, 1952, 1967, 2115
Bst4CI	ACNGT	4 cut(s)	743, 833, 1331, 2077
Bst6I	CTCTTC	5 cut(s)	32, 170, 281, 639, 948
BstACI	GRCGYC	1 cut(s)	161
BstAUI	TGTACA	1 cut(s)	2090
BstC8I	GCNNGC	4 cut(s)	472, 574, 1829, 1833
BstDEI	CTNAG	7 cut(s)	882, 916, 1065, 1368, 1575, 1730, 1991
BstDSI	CCRYGG	1 cut(s)	1617
BstF5I	GGATG	6 cut(s)	80, 304, 310, 607, 793, 877
BstFNI	CGCG	1 cut(s)	133
BstHHI	GCGC	1 cut(s)	135
BstKTI	GATC	7 cut(s)	19, 44, 70, 128, 1522, 1624, 1716
BstMAI	GTCTC	1 cut(s)	641
BstMBI	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
BstMWI	GCNNNNNNNGC	4 cut(s)	217, 1447, 1576, 1811
BstNI	CCWGG	4 cut(s)	441, 1952, 1967, 2115
BstNSI	RCATGY	1 cut(s)	1073
BstSCI	CCNGG	6 cut(s)	439, 639, 1246, 1950, 1965, 2113
BstSFI	CTRYAG	2 cut(s)	1378, 1761
BstUI	CGCG	1 cut(s)	133
BstV1I	GCAGC	7 cut(s)	229, 556, 991, 1714, 1799, 1847, 1943
BstV2I	GAAGAC	1 cut(s)	667
BstX2I	RGATCY	4 cut(s)	16, 41, 67, 1621
BstXI	CCANNNNNNTGG	1 cut(s)	447
BstYI	RGATCY	4 cut(s)	16, 41, 67, 1621
Bsu15I	ATCGAT	1 cut(s)	728
BsuRI	GGCC	4 cut(s)	710, 1570, 1686, 2276
BsuTUI	ATCGAT	1 cut(s)	728
BtgI	CCRYGG	1 cut(s)	1617
BtgZI	GCGATG	1 cut(s)	2241
BtrI	CACGTC	1 cut(s)	277
BtsCI	GGATG	6 cut(s)	80, 304, 310, 607, 793, 877
BtsI	GCAGTG	1 cut(s)	1115
BtsIMutI	CAGTG	4 cut(s)	739, 823, 1115, 2243
BveI	ACCTGC	2 cut(s)	211, 310
Cac8I	GCNNGC	4 cut(s)	472, 574, 1829, 1833
CaiI	CAGNNNCTG	1 cut(s)	923
CciI	TCATGA	1 cut(s)	994
CfoI	GCGC	1 cut(s)	135
Cfr13I	GGNCC	2 cut(s)	490, 1685
ClaI	ATCGAT	1 cut(s)	728
CseI	GACGC	2 cut(s)	169, 830
Csp6I	GTAC	5 cut(s)	244, 606, 829, 1271, 2091
CviAII	CATG	5 cut(s)	995, 1070, 1238, 1618, 2120
CviQI	GTAC	5 cut(s)	244, 606, 829, 1271, 2091
DdeI	CTNAG	7 cut(s)	882, 916, 1065, 1368, 1575, 1730, 1991
DpnI	GATC	7 cut(s)	18, 43, 69, 127, 1521, 1623, 1715
DpnII	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
DraI	TTTAAA	1 cut(s)	426
EaeI	YGGCCR	2 cut(s)	708, 2274
Eam1104I	CTCTTC	5 cut(s)	32, 170, 281, 639, 948
EarI	CTCTTC	5 cut(s)	32, 170, 281, 639, 948
EciI	GGCGGA	3 cut(s)	20, 100, 215
Ecl136II	GAGCTC	1 cut(s)	992
Eco130I	CCWWGG	2 cut(s)	1617, 2267
Eco24I	GRGCYC	1 cut(s)	994
Eco47I	GGWCC	1 cut(s)	490
Eco53kI	GAGCTC	1 cut(s)	992
Eco57I	CTGAAG	5 cut(s)	672, 951, 1320, 1914, 2267
Eco88I	CYCGRG	1 cut(s)	987
EcoICRI	GAGCTC	1 cut(s)	992
EcoRII	CCWGG	4 cut(s)	439, 1950, 1965, 2113
EcoT14I	CCWWGG	2 cut(s)	1617, 2267
EcoT22I	ATGCAT	1 cut(s)	1747
EcoT38I	GRGCYC	1 cut(s)	994
ErhI	CCWWGG	2 cut(s)	1617, 2267
FaeI	CATG	5 cut(s)	998, 1073, 1241, 1621, 2123
FatI	CATG	5 cut(s)	994, 1069, 1237, 1617, 2119
FauI	CCCGC	2 cut(s)	128, 581
FokI	GGATG	6 cut(s)	67, 311, 317, 614, 800, 884
FriOI	GRGCYC	1 cut(s)	994
FspBI	CTAG	3 cut(s)	759, 974, 1274
GlaI	GCGC	1 cut(s)	134
GsuI	CTGGAG	2 cut(s)	538, 1818
HaeIII	GGCC	4 cut(s)	710, 1570, 1686, 2276
HapII	CCGG	3 cut(s)	641, 679, 1247
HgaI	GACGC	2 cut(s)	169, 830
HhaI	GCGC	1 cut(s)	135
Hin1I	GRCGYC	1 cut(s)	161
Hin1II	CATG	5 cut(s)	998, 1073, 1241, 1621, 2123
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HindIII	AAGCTT	2 cut(s)	545, 2147
HinfI	GANTC	7 cut(s)	704, 725, 730, 914, 920, 1665, 2177
HpaII	CCGG	3 cut(s)	641, 679, 1247
HphI	GGTGA	5 cut(s)	872, 1356, 1981, 2057, 2165
Hpy166II	GTNNAC	3 cut(s)	244, 1271, 2091
Hpy188I	TCNGA	8 cut(s)	67, 159, 919, 925, 1204, 1300, 1894, 2223
Hpy8I	GTNNAC	3 cut(s)	244, 1271, 2091
Hpy99I	CGWCG	4 cut(s)	163, 199, 251, 1812
HpyAV	CCTTC	6 cut(s)	96, 229, 352, 776, 1889, 2242
HpyCH4III	ACNGT	4 cut(s)	743, 833, 1331, 2077
HpyCH4IV	ACGT	4 cut(s)	276, 533, 904, 1222
HpyF10VI	GCNNNNNNNGC	4 cut(s)	217, 1447, 1576, 1811
HpyF3I	CTNAG	7 cut(s)	882, 916, 1065, 1368, 1575, 1730, 1991
HpySE526I	ACGT	4 cut(s)	276, 533, 904, 1222
Hsp92I	GRCGYC	1 cut(s)	161
Hsp92II	CATG	5 cut(s)	998, 1073, 1241, 1621, 2123
HspAI	GCGC	1 cut(s)	133
Kpn2I	TCCGGA	1 cut(s)	678
KpnI	GGTACC	1 cut(s)	609
Kzo9I	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
LmnI	GCTCC	3 cut(s)	328, 501, 2183
Lsp1109I	GCAGC	7 cut(s)	229, 556, 991, 1714, 1799, 1847, 1943
LweI	GCATC	8 cut(s)	868, 1067, 1136, 1297, 1370, 1417, 1732, 1792
MaeI	CTAG	3 cut(s)	759, 974, 1274
MaeII	ACGT	4 cut(s)	276, 533, 904, 1222
MaeIII	GTNAC	4 cut(s)	377, 905, 1528, 2196
MalI	GATC	7 cut(s)	18, 43, 69, 127, 1521, 1623, 1715
MbiI	CCGCTC	1 cut(s)	106
MboI	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
MflI	RGATCY	4 cut(s)	16, 41, 67, 1621
MhlI	GDGCHC	2 cut(s)	962, 994
MlsI	TGGCCA	1 cut(s)	2276
MluNI	TGGCCA	1 cut(s)	2276
MlyI	GAGTC	2 cut(s)	908, 914
MmeI	TCCRAC	4 cut(s)	182, 579, 1149, 1400
Mox20I	TGGCCA	1 cut(s)	2276
Mph1103I	ATGCAT	1 cut(s)	1747
MroI	TCCGGA	1 cut(s)	678
MroXI	GAANNNNTTC	2 cut(s)	729, 2109
MscI	TGGCCA	1 cut(s)	2276
MseI	TTAA	3 cut(s)	405, 425, 1400
MslI	CAYNNNNRTG	1 cut(s)	719
Msp20I	TGGCCA	1 cut(s)	2276
MspA1I	CMGCKG	1 cut(s)	1838
MspI	CCGG	3 cut(s)	641, 679, 1247
MspR9I	CCNGG	6 cut(s)	441, 641, 1248, 1952, 1967, 2115
Mva1269I	GAATGC	3 cut(s)	1181, 1891, 2162
MvaI	CCWGG	4 cut(s)	441, 1952, 1967, 2115
MvnI	CGCG	1 cut(s)	133
MwoI	GCNNNNNNNGC	4 cut(s)	217, 1447, 1576, 1811
NciI	CCSGG	2 cut(s)	641, 1248
NcoI	CCATGG	1 cut(s)	1617
NdeII	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
NlaIII	CATG	5 cut(s)	998, 1073, 1241, 1621, 2123
NlaIV	GGNNCC	6 cut(s)	69, 435, 607, 1195, 1687, 1956
NmeAIII	GCCGAG	1 cut(s)	164
NmuCI	GTSAC	2 cut(s)	377, 905
NsiI	ATGCAT	1 cut(s)	1747
NspI	RCATGY	1 cut(s)	1073
PaeR7I	CTCGAG	1 cut(s)	987
PagI	TCATGA	1 cut(s)	994
PaqCI	CACCTGC	2 cut(s)	211, 310
PcsI	WCGNNNNNNNCGW	2 cut(s)	252, 1479
PctI	GAATGC	3 cut(s)	1181, 1891, 2162
PdmI	GAANNNNTTC	2 cut(s)	729, 2109
PfeI	GAWTC	5 cut(s)	704, 725, 730, 1665, 2177
PfoI	TCCNGGA	3 cut(s)	639, 1246, 2113
PleI	GAGTC	2 cut(s)	908, 914
PpsI	GAGTC	2 cut(s)	908, 914
Psp124BI	GAGCTC	1 cut(s)	994
Psp6I	CCWGG	4 cut(s)	439, 1950, 1965, 2113
PspGI	CCWGG	4 cut(s)	439, 1950, 1965, 2113
PspN4I	GGNNCC	6 cut(s)	69, 435, 607, 1195, 1687, 1956
PspPI	GGNCC	2 cut(s)	490, 1685
PstNI	CAGNNNCTG	1 cut(s)	923
PsuI	RGATCY	4 cut(s)	16, 41, 67, 1621
PvuII	CAGCTG	1 cut(s)	1838
RsaI	GTAC	5 cut(s)	245, 607, 830, 1272, 2092
RsaNI	GTAC	5 cut(s)	244, 606, 829, 1271, 2091
RseI	CAYNNNNRTG	1 cut(s)	719
SacI	GAGCTC	1 cut(s)	994
SaqAI	TTAA	3 cut(s)	405, 425, 1400
Sau3AI	GATC	7 cut(s)	16, 41, 67, 125, 1519, 1621, 1713
Sau96I	GGNCC	2 cut(s)	490, 1685
SchI	GAGTC	2 cut(s)	908, 914
ScrFI	CCNGG	6 cut(s)	441, 641, 1248, 1952, 1967, 2115
SduI	GDGCHC	2 cut(s)	962, 994
SfaNI	GCATC	8 cut(s)	868, 1067, 1136, 1297, 1370, 1417, 1732, 1792
SfcI	CTRYAG	2 cut(s)	1378, 1761
Sfr274I	CTCGAG	1 cut(s)	987
SinI	GGWCC	1 cut(s)	490
SlaI	CTCGAG	1 cut(s)	987
SmiMI	CAYNNNNRTG	1 cut(s)	719
SmlI	CTYRAG	2 cut(s)	987, 1651
SmoI	CTYRAG	2 cut(s)	987, 1651
SspMI	CTAG	3 cut(s)	759, 974, 1274
SstI	GAGCTC	1 cut(s)	994
StyD4I	CCNGG	6 cut(s)	439, 639, 1246, 1950, 1965, 2113
StyI	CCWWGG	2 cut(s)	1617, 2267
TaaI	ACNGT	4 cut(s)	743, 833, 1331, 2077
TaiI	ACGT	4 cut(s)	279, 536, 907, 1225
TaqI	TCGA	8 cut(s)	194, 261, 538, 728, 988, 1411, 1657, 2058
TatI	WGTACW	2 cut(s)	1270, 2090
TauI	GCSGC	3 cut(s)	138, 166, 255
TfiI	GAWTC	5 cut(s)	704, 725, 730, 1665, 2177
Tru1I	TTAA	3 cut(s)	405, 425, 1400
Tru9I	TTAA	3 cut(s)	405, 425, 1400
TscAI	CASTG	4 cut(s)	746, 830, 1122, 2250
TseFI	GTSAC	2 cut(s)	377, 905
TseI	GCWGC	7 cut(s)	217, 569, 1004, 1702, 1787, 1835, 1931
Tsp45I	GTSAC	2 cut(s)	377, 905
TspRI	CASTG	4 cut(s)	746, 830, 1122, 2250
VpaK11BI	GGWCC	1 cut(s)	490
XapI	RAATTY	2 cut(s)	1009, 1288
XceI	RCATGY	1 cut(s)	1073
XcmI	CCANNNNNNNNNTGG	1 cut(s)	718
XhoI	CTCGAG	1 cut(s)	987
XmnI	GAANNNNTTC	2 cut(s)	729, 2109
XspI	CTAG	3 cut(s)	759, 974, 1274
Zsp2I	ATGCAT	1 cut(s)	1747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.