Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0011252

Physical Location & Seq

Genomic Coordinates Reverse (-)

35257371 .. 35262102

Gene Structure 4732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G026040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGAATCTATTCTTCAACATTGTTTTGTGATGAACCCTAAAGAATATGCCAAAGCCAATGAAGGGGATGATGTCTTCTTATGCGAATATGAATATGATATTCACTGGTACAGTTTCAAGCGTCTTGCAGAAATTGACGATGATGAAAAGGATGATGATGATGATGCTGAGAGTGATGAAGATTGGAAATGTGGCAAAGACTCAGACTCTGATACAGAAGAAGATGTTGAGTTTGAAGAAGAGAGCACAAAGAATATACTGGCTAAACCATCTCGAGCTCATGAGTTGGCTGCAAATTCACATAAGGGGCGGTTCTTTGGACTTCAAAAGATTGGAATGAAGAAAATCCCCGAGCATGTTAGATGCCATAAGCAGACTGCTCTTGAAAGAGCAAAATCAACACTTCTGTTGGCATCATTGCCTAAGTCTTTACCTTGCAGGGATAAAGAAATGTTGGAGATAAGTGCATTCATCAAGGGTGCCATCTCTGATGATAAATGTCTTGGACGTTGCCTCTATATTCACGGTGTTCCTGGAACTGGAAAGACTATGAGTGTACTGGCAGTAATGAGGAATTTGAGGTCTGAAGTTGATGCTGGAAGTTTAAGACCTTACTGTTTTGTGGAGATAAATGGTCTAAAGTTGGCAGCACCTGAGAATATCTACAGGGTTATATATGAAGCGTTAAGTGGGCATCGAGTTGGTTGGAAAAAGGCTCTCCACTTGCTAAATGAGCGATTTTCTGATGGAAAGAAATTCGGCAAAGAGGATGACAAACCTTGTATTCTTCTTATTGATGAACTTGATCTTCTTGTGACCAGAAACCAATCGGTTCTCTATAACATTCTTGACTGGCCTACTAAGCCACACTCAAAATTAGTTGTAATAGGCATAGCAAATACCATGGATCTTCCGGAAAAGTTGCTTCCGCGTATTTCAAGTCGAATGGGAATCCAAAGGCTTTGCTTTGGCCCCTATAATTACCAGCAGCTTCAAGAGATCATTTCGAGTCGGCTTAGAGGAATTGATGCATTTGAAAAACAAGCTATAGAGTTCGCTTCAAGAAAGGTAGCAGCTATTTCAGGGGATGCTCGTCGTGCATTGGAAATATGCAGGCGTGCAGCTGAAATCAAAGATTACCGCATAAAGAAGTTAATTTCAACTCCCAACAATGCTTCTAAAGAAAAAGCACTTGTTGGTATGGCAGAGGTTGAAGCAGCCATACAAGAAATGTTCCAGGCACCTCATATCCAGGTGATGAAAACTTGTTCCAAACTGGGTAAAATCTATTTGACTGCTATGGTGTATGAACTCTATAAAACAGGAATGGGTGAAACTACTTTCGAAAAGTTGGCAATGACTGTTTATAATCTGTGTACAAGCAATGGAGAAGCATTTCCTGGACATGATATGCTGTTAAAAGTCGGTTGTAAGCTTGGTGAATGCAGAATTATTCTATGTGAATCAGGAGCAAAGCACAGATTGCAGAAGTTACAGCTCAACTTTCCAAGTGACGATGTAGCATTTGCACTGAAGGAAAGCAAGGAACTACCTTGGTTGGCCAAGTATCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005664 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006277 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009059 GO:0009566 GO:0009567 GO:0009889 GO:0009987 GO:0010385 GO:0010468 GO:0010556 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071897 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA BAH PHD

Protein Analysis

524

Amino Acids

59.31

Weight (kDa)

6.4

Isoelectric Point (pI)

37.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_16	PF13191	144 - 288	1.1e-07	AAA ATPase domain
AAA_22	PF13401	170 - 296	2.8e-08	AAA domain
AAA	PF00004	173 - 318	2.9e-17	ATPase family associated with various cellular activities (AAA)
Cdc6-ORC-like_ATPase_lid	PF22606	326 - 378	1.8e-08	Cdc6/ORC-like, ATPase lid domain
AAA_lid_10	PF17872	346 - 380	1.6e-10	AAA lid domain
WHD_Cdc6	PF09079	419 - 510	6.3e-08	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12620 AT4G14700
fragaria_vesca	FvH4_7g17041
malus_domestica	MD03G1176600.v1.1 MD11G1197200.v1.1
prunus_persica	Prupe.4G246200_v2.0.a1 Prupe.5G048200_v2.0.a1 Prupe.5G048200_v2.0.a1
pyrus_communis	pycom03g13390
rosa_chinensis	RchiOBHm_Chr3g0490671
rosa_laevigata	RLG00000022877
rosa_multiflora	Rmu_sc0006380.1_g000017 Rmu_sc0012075.1_g000007
rosa_roxburghii	Rroxscaffold_6G00393320
rosa_rugosa	Rorug03G0245400
rosa_samantha	Rh3AG294600 Rh3BG330800 Rh3CG328300 Rh3DG327700
rosa_wichuraiana	Rw3G026040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1368
AccB1I	GGYRCC	2 cut(s)	479, 1240
AccII	CGCG	1 cut(s)	931
AccIII	TCCGGA	1 cut(s)	913
AciI	CCGC	3 cut(s)	310, 929, 1141
AclWI	GGATC	1 cut(s)	915
AcoI	YGGCCR	1 cut(s)	1560
AcsI	RAATTY	3 cut(s)	295, 574, 755
AcuI	CTGAAG	2 cut(s)	606, 1553
AfaI	GTAC	3 cut(s)	110, 558, 1378
AfiI	CCNNNNNNNGG	2 cut(s)	63, 539
AjnI	CCWGG	4 cut(s)	532, 1236, 1251, 1399
AluBI	AGCT	7 cut(s)	278, 991, 1046, 1076, 1124, 1435, 1498
AluI	AGCT	7 cut(s)	278, 991, 1046, 1076, 1124, 1435, 1498
Alw21I	GWGCWC	2 cut(s)	248, 280
AlwI	GGATC	1 cut(s)	915
AlwNI	CAGNNNCTG	2 cut(s)	209, 653
Ama87I	CYCGRG	2 cut(s)	273, 350
Aor13HI	TCCGGA	1 cut(s)	913
AoxI	GGCC	3 cut(s)	854, 970, 1560
ApeKI	GCWGC	6 cut(s)	290, 647, 988, 1073, 1121, 1217
ApoI	RAATTY	3 cut(s)	295, 574, 755
Asp700I	GAANNNNTTC	2 cut(s)	9, 1395
AspS9I	GGNCC	1 cut(s)	971
AsuHPI	GGTGA	3 cut(s)	1267, 1343, 1451
AsuII	TTCGAA	1 cut(s)	1344
AvaI	CYCGRG	2 cut(s)	273, 350
BalI	TGGCCA	1 cut(s)	1562
BanI	GGYRCC	2 cut(s)	479, 1240
BanII	GRGCYC	1 cut(s)	280
BarI	GAAGNNNNNNTAC	2 cut(s)	1206, 1238
BbsI	GAAGAC	1 cut(s)	67
Bbv12I	GWGCWC	2 cut(s)	248, 280
BbvI	GCAGC	6 cut(s)	277, 659, 1000, 1085, 1133, 1229
BccI	CCATC	3 cut(s)	277, 491, 740
BciT130I	CCWGG	4 cut(s)	534, 1238, 1253, 1401
BfmI	CTRYAG	2 cut(s)	664, 1047
BisI	GCNGC	6 cut(s)	291, 648, 989, 1074, 1122, 1218
BlsI	GCNGC	6 cut(s)	292, 649, 990, 1075, 1123, 1219
Bme1390I	CCNGG	4 cut(s)	534, 1238, 1253, 1401
BmeT110I	CYCGRG	2 cut(s)	273, 350
BmgT120I	GGNCC	1 cut(s)	971
BmiI	GGNNCC	3 cut(s)	481, 973, 1242
BmrFI	CCNGG	4 cut(s)	534, 1238, 1253, 1401
BmrI	ACTGGG	1 cut(s)	1286
BmsI	GCATC	7 cut(s)	154, 353, 422, 583, 703, 1018, 1078
BmuI	ACTGGG	1 cut(s)	1286
BpiI	GAAGAC	1 cut(s)	67
Bpu14I	TTCGAA	1 cut(s)	1344
BsaJI	CCNNGG	2 cut(s)	903, 1553
BsaWI	WCCGGW	1 cut(s)	913
Bsc4I	CCNNNNNNNGG	2 cut(s)	63, 539
Bse1I	ACTGG	6 cut(s)	110, 264, 544, 564, 857, 1281
Bse3DI	GCAATG	3 cut(s)	416, 1362, 1390
BseAI	TCCGGA	1 cut(s)	913
BseBI	CCWGG	4 cut(s)	534, 1238, 1253, 1401
BseDI	CCNNGG	2 cut(s)	903, 1553
BseGI	GGATG	4 cut(s)	73, 157, 775, 1093
BseLI	CCNNNNNNNGG	2 cut(s)	63, 539
BseMI	GCAATG	3 cut(s)	416, 1362, 1390
BseMII	CTCAG	3 cut(s)	159, 216, 645
BseNI	ACTGG	6 cut(s)	110, 264, 544, 564, 857, 1281
BseXI	GCAGC	6 cut(s)	277, 659, 1000, 1085, 1133, 1229
BsgI	GTGCAG	1 cut(s)	1140
Bsh1236I	CGCG	1 cut(s)	931
BshFI	GGCC	3 cut(s)	856, 972, 1562
BshNI	GGYRCC	2 cut(s)	479, 1240
BsiHKAI	GWGCWC	2 cut(s)	248, 280
BsiHKCI	CYCGRG	2 cut(s)	273, 350
BsiSI	CCGG	1 cut(s)	914
BslI	CCNNNNNNNGG	2 cut(s)	63, 539
BsmI	GAATGC	2 cut(s)	467, 1448
BsnI	GGCC	3 cut(s)	856, 972, 1562
BsoBI	CYCGRG	2 cut(s)	273, 350
Bsp119I	TTCGAA	1 cut(s)	1344
Bsp1286I	GDGCHC	2 cut(s)	248, 280
Bsp13I	TCCGGA	1 cut(s)	913
Bsp1407I	TGTACA	1 cut(s)	1376
Bsp143I	GATC	3 cut(s)	805, 907, 999
Bsp19I	CCATGG	1 cut(s)	903
BspACI	CCGC	3 cut(s)	310, 929, 1141
BspANI	GGCC	3 cut(s)	856, 972, 1562
BspCNI	CTCAG	3 cut(s)	160, 215, 646
BspEI	TCCGGA	1 cut(s)	913
BspFNI	CGCG	1 cut(s)	931
BspHI	TCATGA	1 cut(s)	280
BspLI	GGNNCC	3 cut(s)	481, 973, 1242
BspPI	GGATC	1 cut(s)	915
BspT104I	TTCGAA	1 cut(s)	1344
BspT107I	GGYRCC	2 cut(s)	479, 1240
BsrDI	GCAATG	3 cut(s)	416, 1362, 1390
BsrGI	TGTACA	1 cut(s)	1376
BsrI	ACTGG	6 cut(s)	110, 264, 544, 564, 857, 1281
BssECI	CCNNGG	2 cut(s)	903, 1553
BssMI	GATC	3 cut(s)	805, 907, 999
BssT1I	CCWWGG	2 cut(s)	903, 1553
Bst2UI	CCWGG	4 cut(s)	534, 1238, 1253, 1401
Bst4CI	ACNGT	4 cut(s)	113, 527, 617, 1363
Bst6I	CTCTTC	1 cut(s)	234
BstAPI	GCANNNNNTGC	1 cut(s)	1483
BstAUI	TGTACA	1 cut(s)	1376
BstBI	TTCGAA	1 cut(s)	1344
BstC8I	GCNNGC	2 cut(s)	1115, 1119
BstDEI	CTNAG	6 cut(s)	168, 202, 423, 654, 861, 1016
BstDSI	CCRYGG	1 cut(s)	903
BstF5I	GGATG	4 cut(s)	73, 157, 775, 1093
BstFNI	CGCG	1 cut(s)	931
BstKTI	GATC	3 cut(s)	808, 910, 1002
BstMBI	GATC	3 cut(s)	805, 907, 999
BstMWI	GCNNNNNNNGC	4 cut(s)	733, 862, 1097, 1483
BstNI	CCWGG	4 cut(s)	534, 1238, 1253, 1401
BstNSI	RCATGY	1 cut(s)	359
BstSCI	CCNGG	4 cut(s)	532, 1236, 1251, 1399
BstSFI	CTRYAG	2 cut(s)	664, 1047
BstUI	CGCG	1 cut(s)	931
BstV1I	GCAGC	6 cut(s)	277, 659, 1000, 1085, 1133, 1229
BstV2I	GAAGAC	1 cut(s)	67
BstX2I	RGATCY	1 cut(s)	907
BstYI	RGATCY	1 cut(s)	907
BsuRI	GGCC	3 cut(s)	856, 972, 1562
BtgI	CCRYGG	1 cut(s)	903
BtsCI	GGATG	4 cut(s)	73, 157, 775, 1093
BtsIMutI	CAGTG	2 cut(s)	103, 1529
Cac8I	GCNNGC	2 cut(s)	1115, 1119
CaiI	CAGNNNCTG	2 cut(s)	209, 653
CciI	TCATGA	1 cut(s)	280
Cfr13I	GGNCC	1 cut(s)	971
CseI	GACGC	1 cut(s)	110
Csp6I	GTAC	3 cut(s)	109, 557, 1377
CviAII	CATG	4 cut(s)	281, 356, 904, 1406
CviQI	GTAC	3 cut(s)	109, 557, 1377
DdeI	CTNAG	6 cut(s)	168, 202, 423, 654, 861, 1016
DpnI	GATC	3 cut(s)	807, 909, 1001
DpnII	GATC	3 cut(s)	805, 907, 999
EaeI	YGGCCR	1 cut(s)	1560
Eam1104I	CTCTTC	1 cut(s)	234
EarI	CTCTTC	1 cut(s)	234
Ecl136II	GAGCTC	1 cut(s)	278
Eco130I	CCWWGG	2 cut(s)	903, 1553
Eco24I	GRGCYC	1 cut(s)	280
Eco53kI	GAGCTC	1 cut(s)	278
Eco57I	CTGAAG	2 cut(s)	606, 1553
Eco88I	CYCGRG	2 cut(s)	273, 350
EcoICRI	GAGCTC	1 cut(s)	278
EcoRII	CCWGG	4 cut(s)	532, 1236, 1251, 1399
EcoT14I	CCWWGG	2 cut(s)	903, 1553
EcoT22I	ATGCAT	1 cut(s)	1033
EcoT38I	GRGCYC	1 cut(s)	280
ErhI	CCWWGG	2 cut(s)	903, 1553
FaeI	CATG	4 cut(s)	284, 359, 907, 1409
FatI	CATG	4 cut(s)	280, 355, 903, 1405
Fnu4HI	GCNGC	6 cut(s)	291, 648, 989, 1074, 1122, 1218
FokI	GGATG	4 cut(s)	80, 164, 782, 1100
FriOI	GRGCYC	1 cut(s)	280
Fsp4HI	GCNGC	6 cut(s)	291, 648, 989, 1074, 1122, 1218
GluI	GCNGC	6 cut(s)	291, 648, 989, 1074, 1122, 1218
HaeIII	GGCC	3 cut(s)	856, 972, 1562
HapII	CCGG	1 cut(s)	914
HgaI	GACGC	1 cut(s)	110
Hin1II	CATG	4 cut(s)	284, 359, 907, 1409
HindIII	AAGCTT	1 cut(s)	1433
HinfI	GANTC	6 cut(s)	5, 200, 206, 951, 1009, 1463
HpaII	CCGG	1 cut(s)	914
HphI	GGTGA	3 cut(s)	1267, 1343, 1451
Hpy166II	GTNNAC	2 cut(s)	557, 1377
Hpy188I	TCNGA	6 cut(s)	205, 211, 490, 586, 745, 1574
Hpy188III	TCNNGA	8 cut(s)	273, 281, 383, 848, 914, 995, 1062, 1467
Hpy8I	GTNNAC	2 cut(s)	557, 1377
Hpy99I	CGWCG	1 cut(s)	1098
HpyAV	CCTTC	2 cut(s)	56, 1528
HpyCH4III	ACNGT	4 cut(s)	113, 527, 617, 1363
HpyCH4IV	ACGT	1 cut(s)	508
HpyF10VI	GCNNNNNNNGC	4 cut(s)	733, 862, 1097, 1483
HpyF3I	CTNAG	6 cut(s)	168, 202, 423, 654, 861, 1016
HpySE526I	ACGT	1 cut(s)	508
Hsp92II	CATG	4 cut(s)	284, 359, 907, 1409
Kpn2I	TCCGGA	1 cut(s)	913
Kzo9I	GATC	3 cut(s)	805, 907, 999
LmnI	GCTCC	1 cut(s)	1469
Lsp1109I	GCAGC	6 cut(s)	277, 659, 1000, 1085, 1133, 1229
LweI	GCATC	7 cut(s)	154, 353, 422, 583, 703, 1018, 1078
MaeII	ACGT	1 cut(s)	508
MaeIII	GTNAC	3 cut(s)	814, 1491, 1511
MalI	GATC	3 cut(s)	807, 909, 1001
MboI	GATC	3 cut(s)	805, 907, 999
MflI	RGATCY	1 cut(s)	907
MhlI	GDGCHC	2 cut(s)	248, 280
MlsI	TGGCCA	1 cut(s)	1562
MluCI	AATT	9 cut(s)	132, 295, 574, 755, 875, 979, 1023, 1155, 1449
MluNI	TGGCCA	1 cut(s)	1562
MlyI	GAGTC	3 cut(s)	194, 200, 1018
MmeI	TCCRAC	2 cut(s)	435, 686
MnlI	CCTC	7 cut(s)	524, 564, 573, 760, 1013, 1201, 1254
Mox20I	TGGCCA	1 cut(s)	1562
Mph1103I	ATGCAT	1 cut(s)	1033
MroI	TCCGGA	1 cut(s)	913
MroXI	GAANNNNTTC	2 cut(s)	9, 1395
MscI	TGGCCA	1 cut(s)	1562
MseI	TTAA	4 cut(s)	605, 686, 1154, 1418
Msp20I	TGGCCA	1 cut(s)	1562
MspA1I	CMGCKG	1 cut(s)	1124
MspI	CCGG	1 cut(s)	914
MspR9I	CCNGG	4 cut(s)	534, 1238, 1253, 1401
Mva1269I	GAATGC	2 cut(s)	467, 1448
MvaI	CCWGG	4 cut(s)	534, 1238, 1253, 1401
MvnI	CGCG	1 cut(s)	931
MwoI	GCNNNNNNNGC	4 cut(s)	733, 862, 1097, 1483
NcoI	CCATGG	1 cut(s)	903
NdeII	GATC	3 cut(s)	805, 907, 999
NlaIII	CATG	4 cut(s)	284, 359, 907, 1409
NlaIV	GGNNCC	3 cut(s)	481, 973, 1242
NmuCI	GTSAC	2 cut(s)	814, 1511
NsiI	ATGCAT	1 cut(s)	1033
NspI	RCATGY	1 cut(s)	359
NspV	TTCGAA	1 cut(s)	1344
PaeR7I	CTCGAG	1 cut(s)	273
PagI	TCATGA	1 cut(s)	280
PctI	GAATGC	2 cut(s)	467, 1448
PdmI	GAANNNNTTC	2 cut(s)	9, 1395
PfeI	GAWTC	3 cut(s)	5, 951, 1463
PfoI	TCCNGGA	2 cut(s)	532, 1399
PkrI	GCNGC	6 cut(s)	292, 649, 990, 1075, 1123, 1219
PleI	GAGTC	3 cut(s)	194, 200, 1017
PpsI	GAGTC	3 cut(s)	194, 200, 1017
PsiI	TTATAA	1 cut(s)	1368
Psp124BI	GAGCTC	1 cut(s)	280
Psp6I	CCWGG	4 cut(s)	532, 1236, 1251, 1399
PspGI	CCWGG	4 cut(s)	532, 1236, 1251, 1399
PspN4I	GGNNCC	3 cut(s)	481, 973, 1242
PspPI	GGNCC	1 cut(s)	971
PstNI	CAGNNNCTG	2 cut(s)	209, 653
PsuI	RGATCY	1 cut(s)	907
PvuII	CAGCTG	1 cut(s)	1124
RsaI	GTAC	3 cut(s)	110, 558, 1378
RsaNI	GTAC	3 cut(s)	109, 557, 1377
SacI	GAGCTC	1 cut(s)	280
SaqAI	TTAA	4 cut(s)	605, 686, 1154, 1418
SatI	GCNGC	6 cut(s)	291, 648, 989, 1074, 1122, 1218
Sau3AI	GATC	3 cut(s)	805, 907, 999
Sau96I	GGNCC	1 cut(s)	971
SchI	GAGTC	3 cut(s)	194, 200, 1018
ScrFI	CCNGG	4 cut(s)	534, 1238, 1253, 1401
SduI	GDGCHC	2 cut(s)	248, 280
SfaNI	GCATC	7 cut(s)	154, 353, 422, 583, 703, 1018, 1078
SfcI	CTRYAG	2 cut(s)	664, 1047
Sfr274I	CTCGAG	1 cut(s)	273
SfuI	TTCGAA	1 cut(s)	1344
SlaI	CTCGAG	1 cut(s)	273
SmlI	CTYRAG	1 cut(s)	273
SmoI	CTYRAG	1 cut(s)	273
Sse9I	AATT	9 cut(s)	132, 295, 574, 755, 875, 979, 1023, 1155, 1449
SsiI	CCGC	3 cut(s)	310, 929, 1141
SstI	GAGCTC	1 cut(s)	280
StyD4I	CCNGG	4 cut(s)	532, 1236, 1251, 1399
StyI	CCWWGG	2 cut(s)	903, 1553
TaaI	ACNGT	4 cut(s)	113, 527, 617, 1363
TaiI	ACGT	1 cut(s)	511
TaqI	TCGA	5 cut(s)	274, 697, 943, 1007, 1344
TasI	AATT	9 cut(s)	132, 295, 574, 755, 875, 979, 1023, 1155, 1449
TatI	WGTACW	2 cut(s)	556, 1376
TfiI	GAWTC	3 cut(s)	5, 951, 1463
Tru1I	TTAA	4 cut(s)	605, 686, 1154, 1418
Tru9I	TTAA	4 cut(s)	605, 686, 1154, 1418
TscAI	CASTG	2 cut(s)	110, 1536
TseFI	GTSAC	2 cut(s)	814, 1511
TseI	GCWGC	6 cut(s)	290, 647, 988, 1073, 1121, 1217
Tsp45I	GTSAC	2 cut(s)	814, 1511
TspRI	CASTG	2 cut(s)	110, 1536
XapI	RAATTY	3 cut(s)	295, 574, 755
XceI	RCATGY	1 cut(s)	359
XhoI	CTCGAG	1 cut(s)	273
XmnI	GAANNNNTTC	2 cut(s)	9, 1395
Zsp2I	ATGCAT	1 cut(s)	1033

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.