Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0008253

Physical Location & Seq

Genomic Coordinates Reverse (-)

15449020 .. 15452657

Gene Structure 3638 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g18530.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGAGAGCTCTGAGCTCGCAATTGGTGCTACTCGATCTCCAGACCTCATGGCACTCGGCCAACCAAATCCCCATCTCCACCCTCTGCTATCTCCACACCTCCAAACTCTCCTCCTCATTTCGTCGGACACGTGGCGCGCACAAGTCAATCGCTTCGTCCCGACACTCCTCCACCTCGCCGGCGCCGGAGATTCGCCGCCCCTCGGATCGGTTCTTCTCCGGTAACTCTCCGTCTTCGAGTTCCGGGAGCTCGGCGTCCACGTCGCGGACGGAGATGGAGATGTTTCTGGAGCTGCTGCCGGAGAGGATGAAGAGCGAGCTGTACAGGCATGAGGAGATCGGGAAGCTCATTGAGGTTGTGATGGATTTGGGGCGGCCTCCGATCGCGAGGTTTCCGACCGGTGATTGGGTGATCTCGGAGACTCCGGTCAGCCATGAAGATCTCCGGCTCGCTGTTTCTAAGGTTAGTGAGTTTTCGGATGATAACCGTTCTGGAATTAATAACTCGTTACATCGTATTAGTGCTATTCGAAACCGAAAGCTGCAAATCATTGGACTTACTTGCCGGGTGGGGAGAGCGGTGTCAGGGAGTGCCGAGGTCATCCGCGACTTGGTTGAGGGTGGAGGTTCAATCTTGGTGATAGGACCTCCCGGAGTTGGCAAGACGACCTTGATCAGAGAAATTGCTAGAATGTTGGCAGATGAGCATATGAAGCGTGTGGTAATAGTGGATACATCTAATGAGATTGGAGGAGATGGAGATGTTCCGCATGCAGGAATAGGCCGTGCAAGGAGGATGCAAGTTCCTAATGTCAACATGCAGCATAATATTATGATTGAAGCAGTTGAAAATCATATGCCTCAAACCATTATAATAGATGAAATTGGGACAGAGCTTGAAGCATTGGCTGCCAGCACTATTGCCCAAAGAGGAGTTCAACTAGTTGGAACTGCACATGGAATGACAATAGACAACATCATAAAGAATCCTTCTTTACAAATCCTTGTTGGTGGCATAGAGAGTGTGACCCTGGGAGATGAAGAAGCGAGAAAGAGGAAAGTTCAAAAGACAATTCTTGAAAGAAAGGGGCCTCCTACATTTACATGTGCTGTTGAGATCATATCTAAAACAGAATTTCGTGTTCATCACAGATTAGATGCAACAGTTGATGCTATACTAGCTGGGAAATCTCCTTTGTTTGAAGTTCGTCGTATTGATGCTGATGCTGATGACTCTTGCATGCCTACTCAAATCTCTGAACACAACTATCTGAAAGCATCAGATTTTGTTGTTACTACAGACATAGTTGCTAGTGTTTTGGAGTCTGACGAGGAAGATCTAGATCCTCCACCCAATGTGTCTAGAAGATTGAGCAGTGATAAATCTGCGAAGAAGAGAAGTTCACCAGTGTGTATATATACATACAAGATCCTTGAAGCTGACCTACTGCAAGTAGCAAAGGTAATGGGGCTTGAGGATGAAATTGAGGTATCTGATGATATTGGAACAGCAGATGCAATTATAGCATCAAGTGCTGAAATGAAGCAAAACCCATGGATCCGTAGTGTAGCAAAATTTCACCAGTTGCCTGTATTTGTCATGAAGTCAAATACCATGGCTCAAATCGTGAAGGCAGTTCGTATGATTCTTGAAATGGAATCAGTTGGCTCTTTGCCAAAGCAGCTTGTCAATAATTCCTTTGACATTGAAATTGAAGATGATGCACCCAAAAGAAAACCATCTTTAGAAGAGATCGATGCATTGGAGGTGCATTTCCTTTCCCATCCCACGTATTTTCTATGGATACCTCTACCGGCAGTTTCTGAGAAATTGTCCTCTCTGTTGAGGTTCGACTTGCAATCGAGTATATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

625

Amino Acids

68.79

Weight (kDa)

5.89

Isoelectric Point (pI)

55.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Spore_III_AA	PF19568	183 - 336	3.1e-13	Sporulation stage III, protein AA
AAA	PF00004	211 - 296	8.2e-06	ATPase family associated with various cellular activities (AAA)
PTPase	PF25516	470 - 550	1.9e-27	Phosphotyrosine protein phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008253)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10420 AT3G10420
fragaria_vesca	FvH4_7g18530 FvH4_7g18530 FvH4_7g18530
malus_domestica	MD01G1101700.v1.1 MD07G1168300.v1.1
prunus_persica	Prupe.2G206900_v2.0.a1
pyrus_communis	pycom01g12830 pycom07g16270
rosa_chinensis	RchiOBHm_Chr1g0362311
rosa_laevigata	RLG00000027652
rosa_multiflora	Rmu_sc0013178.1_g000001 Rmu_sc0037182.1_g000001
rosa_roxburghii	Rroxscaffold_4G00294260
rosa_rugosa	Rorug01G0297300.1 Rorug01G0297400 Rorug01G0297500
rosa_samantha	Rh1AG306200 Rh1BG269700 Rh1CG287200 Rh1DG299900
rosa_wichuraiana	Rw1G027180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	872
AccB1I	GGYRCC	1 cut(s)	181
AccBSI	CCGCTC	1 cut(s)	578
AccII	CGCG	4 cut(s)	137, 265, 386, 606
AciI	CCGC	6 cut(s)	196, 265, 373, 578, 604, 767
AclWI	GGATC	5 cut(s)	213, 1337, 1423, 1552, 1565
AcoI	YGGCCR	1 cut(s)	57
AcsI	RAATTY	2 cut(s)	1133, 1574
AcvI	CACGTG	1 cut(s)	131
AcyI	GRCGYC	2 cut(s)	182, 254
AfaI	GTAC	1 cut(s)	323
AfiI	CCNNNNNNNGG	7 cut(s)	202, 207, 264, 405, 610, 656, 773
AflIII	ACRYGT	2 cut(s)	128, 1103
AgeI	ACCGGT	1 cut(s)	398
AhlI	ACTAGT	1 cut(s)	940
AjiI	CACGTC	1 cut(s)	261
AjnI	CCWGG	1 cut(s)	1029
AjuI	GAANNNNNNNTTGG	2 cut(s)	918, 950
AleI	CACNNNNGTG	1 cut(s)	1408
Alw21I	GWGCWC	3 cut(s)	10, 17, 251
Alw26I	GTCTC	1 cut(s)	413
AlwI	GGATC	5 cut(s)	213, 1337, 1423, 1552, 1565
AlwNI	CAGNNNCTG	1 cut(s)	1823
AoxI	GGCC	4 cut(s)	57, 374, 781, 1088
ApeKI	GCWGC	6 cut(s)	292, 295, 541, 820, 908, 1681
ApoI	RAATTY	2 cut(s)	1133, 1574
AseI	ATTAAT	1 cut(s)	498
AsiGI	ACCGGT	1 cut(s)	398
AspLEI	GCGC	3 cut(s)	137, 139, 184
AspS9I	GGNCC	2 cut(s)	644, 1088
AsuC2I	CCSGG	3 cut(s)	244, 566, 651
AsuHPI	GGTGA	5 cut(s)	413, 421, 649, 1395, 1571
AsuII	TTCGAA	1 cut(s)	529
AvaII	GGWCC	1 cut(s)	644
BamHI	GGATCC	1 cut(s)	1557
BanI	GGYRCC	1 cut(s)	181
BanII	GRGCYC	3 cut(s)	10, 17, 251
BarI	GAAGNNNNNNTAC	2 cut(s)	1428, 1460
BbrPI	CACGTG	1 cut(s)	131
BbsI	GAAGAC	1 cut(s)	225
Bbv12I	GWGCWC	3 cut(s)	10, 17, 251
BbvI	GCAGC	6 cut(s)	279, 282, 528, 832, 895, 1693
BccI	CCATC	6 cut(s)	80, 268, 355, 749, 1747, 1791
BceAI	ACGGC	1 cut(s)	768
BciT130I	CCWGG	1 cut(s)	1031
BciVI	GTATCC	2 cut(s)	724, 1797
BclI	TGATCA	1 cut(s)	672
BcnI	CCSGG	3 cut(s)	244, 566, 651
BcoDI	GTCTC	1 cut(s)	413
BcuI	ACTAGT	1 cut(s)	940
BfaI	CTAG	6 cut(s)	687, 941, 1178, 1311, 1340, 1362
BfmI	CTRYAG	1 cut(s)	1296
BfoI	RGCGCY	1 cut(s)	185
BfuI	GTATCC	2 cut(s)	724, 1797
BglII	AGATCT	2 cut(s)	439, 1336
BisI	GCNGC	8 cut(s)	196, 293, 296, 374, 542, 821, 909, 1682
BlsI	GCNGC	8 cut(s)	197, 294, 297, 375, 543, 822, 910, 1683
Bme1390I	CCNGG	4 cut(s)	244, 566, 651, 1031
Bme18I	GGWCC	1 cut(s)	644
BmgBI	CACGTC	1 cut(s)	261
BmgT120I	GGNCC	2 cut(s)	644, 1088
BmiI	GGNNCC	3 cut(s)	183, 1089, 1559
BmrFI	CCNGG	4 cut(s)	244, 566, 651, 1031
BoxI	GACNNNNGTC	1 cut(s)	425
BpiI	GAAGAC	1 cut(s)	225
BpmI	CTGGAG	2 cut(s)	23, 308
Bpu14I	TTCGAA	1 cut(s)	529
BpuEI	CTTGAG	1 cut(s)	1493
BpuMI	CCSGG	3 cut(s)	244, 566, 651
Bsa29I	ATCGAT	1 cut(s)	1755
BsaAI	YACGTR	2 cut(s)	131, 1791
BsaBI	GATNNNNATC	1 cut(s)	1341
BsaHI	GRCGYC	2 cut(s)	182, 254
BsaJI	CCNNGG	6 cut(s)	201, 594, 1029, 1030, 1553, 1614
BsaWI	WCCGGW	3 cut(s)	218, 398, 424
BsaXI	ACNNNNNCTCC	2 cut(s)	21, 51
Bsc4I	CCNNNNNNNGG	7 cut(s)	202, 207, 264, 405, 610, 656, 773
Bse118I	RCCGGY	3 cut(s)	178, 398, 1813
Bse1I	ACTGG	2 cut(s)	1406, 1582
Bse8I	GATNNNNATC	1 cut(s)	1341
BseBI	CCWGG	1 cut(s)	1031
BseCI	ATCGAT	1 cut(s)	1755
BseDI	CCNNGG	6 cut(s)	201, 594, 1029, 1030, 1553, 1614
BseGI	GGATG	6 cut(s)	312, 484, 600, 801, 1483, 1783
BseJI	GATNNNNATC	1 cut(s)	1341
BseLI	CCNNNNNNNGG	7 cut(s)	202, 207, 264, 405, 610, 656, 773
BseMII	CTCAG	1 cut(s)	1815
BseNI	ACTGG	2 cut(s)	1406, 1582
BsePI	GCGCGC	1 cut(s)	135
BseRI	GAGGAG	6 cut(s)	100, 103, 157, 347, 765, 945
BseXI	GCAGC	6 cut(s)	279, 282, 528, 832, 895, 1693
BseYI	CCCAGC	1 cut(s)	1181
BsgI	GTGCAG	1 cut(s)	936
Bsh1236I	CGCG	4 cut(s)	137, 265, 386, 606
Bsh1285I	CGRYCG	2 cut(s)	384, 399
BshFI	GGCC	4 cut(s)	59, 376, 783, 1090
BshNI	GGYRCC	1 cut(s)	181
BshTI	ACCGGT	1 cut(s)	398
BshVI	ATCGAT	1 cut(s)	1755
BsiEI	CGRYCG	2 cut(s)	384, 399
BsiHKAI	GWGCWC	3 cut(s)	10, 17, 251
BslFI	GGGAC	2 cut(s)	142, 901
BslI	CCNNNNNNNGG	7 cut(s)	202, 207, 264, 405, 610, 656, 773
BsmAI	GTCTC	1 cut(s)	413
BsmFI	GGGAC	2 cut(s)	142, 901
BsnI	GGCC	4 cut(s)	59, 376, 783, 1090
Bsp119I	TTCGAA	1 cut(s)	529
Bsp1286I	GDGCHC	3 cut(s)	10, 17, 251
Bsp1407I	TGTACA	1 cut(s)	321
Bsp19I	CCATGG	2 cut(s)	1553, 1614
Bsp68I	TCGCGA	1 cut(s)	386
BspACI	CCGC	6 cut(s)	196, 265, 373, 578, 604, 767
BspANI	GGCC	4 cut(s)	59, 376, 783, 1090
BspCNI	CTCAG	1 cut(s)	1816
BspDI	ATCGAT	1 cut(s)	1755
BspFNI	CGCG	4 cut(s)	137, 265, 386, 606
BspHI	TCATGA	1 cut(s)	1599
BspLI	GGNNCC	3 cut(s)	183, 1089, 1559
BspPI	GGATC	5 cut(s)	213, 1337, 1423, 1552, 1565
BspQI	GCTCTTC	1 cut(s)	305
BspT104I	TTCGAA	1 cut(s)	529
BspT107I	GGYRCC	1 cut(s)	181
BsrBI	CCGCTC	1 cut(s)	578
BsrFI	RCCGGY	3 cut(s)	178, 398, 1813
BsrGI	TGTACA	1 cut(s)	321
BsrI	ACTGG	2 cut(s)	1406, 1582
BssAI	RCCGGY	3 cut(s)	178, 398, 1813
BssECI	CCNNGG	6 cut(s)	201, 594, 1029, 1030, 1553, 1614
BssHII	GCGCGC	1 cut(s)	135
BssNI	GRCGYC	2 cut(s)	182, 254
BssT1I	CCWWGG	2 cut(s)	1553, 1614
Bst2UI	CCWGG	1 cut(s)	1031
Bst4CI	ACNGT	2 cut(s)	488, 1165
Bst6I	CTCTTC	3 cut(s)	305, 1388, 1743
BstACI	GRCGYC	2 cut(s)	182, 254
BstAPI	GCANNNNNTGC	3 cut(s)	25, 908, 1532
BstAUI	TGTACA	1 cut(s)	321
BstBAI	YACGTR	2 cut(s)	131, 1791
BstBI	TTCGAA	1 cut(s)	529
BstC8I	GCNNGC	8 cut(s)	17, 137, 180, 317, 450, 771, 913, 1241
BstDEI	CTNAG	3 cut(s)	11, 459, 1824
BstDSI	CCRYGG	2 cut(s)	1553, 1614
BstF5I	GGATG	6 cut(s)	312, 484, 600, 801, 1483, 1783
BstFNI	CGCG	4 cut(s)	137, 265, 386, 606
BstH2I	RGCGCY	1 cut(s)	185
BstHHI	GCGC	3 cut(s)	137, 139, 184
BstMAI	GTCTC	1 cut(s)	413
BstMCI	CGRYCG	2 cut(s)	384, 399
BstMWI	GCNNNNNNNGC	8 cut(s)	25, 325, 712, 908, 1178, 1523, 1532, 1681
BstNI	CCWGG	1 cut(s)	1031
BstNSI	RCATGY	4 cut(s)	773, 820, 1107, 1243
BstPAI	GACNNNNGTC	1 cut(s)	425
BstSCI	CCNGG	4 cut(s)	242, 564, 649, 1029
BstSFI	CTRYAG	1 cut(s)	1296
BstUI	CGCG	4 cut(s)	137, 265, 386, 606
BstV1I	GCAGC	6 cut(s)	279, 282, 528, 832, 895, 1693
BstV2I	GAAGAC	1 cut(s)	225
BstX2I	RGATCY	5 cut(s)	439, 1336, 1342, 1428, 1557
BstYI	RGATCY	5 cut(s)	439, 1336, 1342, 1428, 1557
Bsu15I	ATCGAT	1 cut(s)	1755
BsuI	GTATCC	2 cut(s)	724, 1797
BsuRI	GGCC	4 cut(s)	59, 376, 783, 1090
BsuTUI	ATCGAT	1 cut(s)	1755
BtgI	CCRYGG	2 cut(s)	1553, 1614
BtrI	CACGTC	1 cut(s)	261
BtsCI	GGATG	6 cut(s)	312, 484, 600, 801, 1483, 1783
BtsI	GCAGTG	1 cut(s)	1381
BtsIMutI	CAGTG	2 cut(s)	1381, 1413
BtuMI	TCGCGA	1 cut(s)	386
Cac8I	GCNNGC	8 cut(s)	17, 137, 180, 317, 450, 771, 913, 1241
CaiI	CAGNNNCTG	1 cut(s)	1823
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	3 cut(s)	137, 139, 184
Cfr10I	RCCGGY	3 cut(s)	178, 398, 1813
Cfr13I	GGNCC	2 cut(s)	644, 1088
ClaI	ATCGAT	1 cut(s)	1755
CseI	GACGC	1 cut(s)	243
Csp6I	GTAC	1 cut(s)	322
CspAI	ACCGGT	1 cut(s)	398
CviQI	GTAC	1 cut(s)	322
DdeI	CTNAG	3 cut(s)	11, 459, 1824
DinI	GGCGCC	1 cut(s)	183
EaeI	YGGCCR	1 cut(s)	57
Eam1104I	CTCTTC	3 cut(s)	305, 1388, 1743
EarI	CTCTTC	3 cut(s)	305, 1388, 1743
Ecl136II	GAGCTC	3 cut(s)	8, 15, 249
Eco130I	CCWWGG	2 cut(s)	1553, 1614
Eco24I	GRGCYC	3 cut(s)	10, 17, 251
Eco47I	GGWCC	1 cut(s)	644
Eco53kI	GAGCTC	3 cut(s)	8, 15, 249
Eco72I	CACGTG	1 cut(s)	131
EcoICRI	GAGCTC	3 cut(s)	8, 15, 249
EcoO109I	RGGNCCY	2 cut(s)	644, 1088
EcoRII	CCWGG	1 cut(s)	1029
EcoT14I	CCWWGG	2 cut(s)	1553, 1614
EcoT22I	ATGCAT	1 cut(s)	1762
EcoT38I	GRGCYC	3 cut(s)	10, 17, 251
EgeI	GGCGCC	1 cut(s)	183
EheI	GGCGCC	1 cut(s)	183
ErhI	CCWWGG	2 cut(s)	1553, 1614
FalI	AAGNNNNNCTT	2 cut(s)	653, 685
FaqI	GGGAC	2 cut(s)	142, 901
FauNDI	CATATG	2 cut(s)	708, 855
FbaI	TGATCA	1 cut(s)	672
Fnu4HI	GCNGC	8 cut(s)	196, 293, 296, 374, 542, 821, 909, 1682
FokI	GGATG	6 cut(s)	319, 491, 587, 808, 1490, 1770
FriOI	GRGCYC	3 cut(s)	10, 17, 251
Fsp4HI	GCNGC	8 cut(s)	196, 293, 296, 374, 542, 821, 909, 1682
FspBI	CTAG	6 cut(s)	687, 941, 1178, 1311, 1340, 1362
GlaI	GCGC	3 cut(s)	136, 138, 183
GluI	GCNGC	8 cut(s)	196, 293, 296, 374, 542, 821, 909, 1682
GsaI	CCCAGC	1 cut(s)	1185
GsuI	CTGGAG	2 cut(s)	23, 308
HaeII	RGCGCY	1 cut(s)	185
HaeIII	GGCC	4 cut(s)	59, 376, 783, 1090
HgaI	GACGC	1 cut(s)	243
HhaI	GCGC	3 cut(s)	137, 139, 184
Hin1I	GRCGYC	2 cut(s)	182, 254
Hin6I	GCGC	3 cut(s)	135, 137, 182
HinP1I	GCGC	3 cut(s)	135, 137, 182
HincII	GTYRAC	1 cut(s)	814
HindII	GTYRAC	1 cut(s)	814
HinfI	GANTC	7 cut(s)	190, 421, 985, 1232, 1322, 1645, 1658
HphI	GGTGA	5 cut(s)	413, 421, 649, 1395, 1571
Hpy166II	GTNNAC	3 cut(s)	258, 814, 1403
Hpy8I	GTNNAC	3 cut(s)	258, 814, 1403
Hpy99I	CGWCG	3 cut(s)	126, 265, 1212
HpyAV	CCTTC	2 cut(s)	999, 1624
HpyCH4III	ACNGT	2 cut(s)	488, 1165
HpyCH4IV	ACGT	3 cut(s)	130, 260, 1790
HpyF10VI	GCNNNNNNNGC	8 cut(s)	25, 325, 712, 908, 1178, 1523, 1532, 1681
HpyF3I	CTNAG	3 cut(s)	11, 459, 1824
HpySE526I	ACGT	3 cut(s)	130, 260, 1790
Hsp92I	GRCGYC	2 cut(s)	182, 254
HspAI	GCGC	3 cut(s)	135, 137, 182
KasI	GGCGCC	1 cut(s)	181
KroI	GCCGGC	1 cut(s)	178
KroNI	GCCGGC	1 cut(s)	180
Ksp22I	TGATCA	1 cut(s)	672
LguI	GCTCTTC	1 cut(s)	305
LmnI	GCTCC	2 cut(s)	246, 289
Lsp1109I	GCAGC	6 cut(s)	279, 282, 528, 832, 895, 1693
MaeI	CTAG	6 cut(s)	687, 941, 1178, 1311, 1340, 1362
MaeII	ACGT	3 cut(s)	130, 260, 1790
MaeIII	GTNAC	4 cut(s)	221, 507, 1024, 1291
MbiI	CCGCTC	1 cut(s)	578
MfeI	CAATTG	1 cut(s)	20
MflI	RGATCY	5 cut(s)	439, 1336, 1342, 1428, 1557
MhlI	GDGCHC	3 cut(s)	10, 17, 251
Mly113I	GGCGCC	1 cut(s)	182
MlyI	GAGTC	3 cut(s)	415, 1226, 1331
MmeI	TCCRAC	3 cut(s)	104, 419, 925
Mph1103I	ATGCAT	1 cut(s)	1762
MreI	CGCCGGCG	1 cut(s)	178
MroNI	GCCGGC	1 cut(s)	178
MseI	TTAA	1 cut(s)	498
MslI	CAYNNNNRTG	2 cut(s)	1102, 1408
MspR9I	CCNGG	4 cut(s)	244, 566, 651, 1031
MunI	CAATTG	1 cut(s)	20
MvaI	CCWGG	1 cut(s)	1031
MvnI	CGCG	4 cut(s)	137, 265, 386, 606
MwoI	GCNNNNNNNGC	8 cut(s)	25, 325, 712, 908, 1178, 1523, 1532, 1681
NaeI	GCCGGC	1 cut(s)	180
NarI	GGCGCC	1 cut(s)	182
NciI	CCSGG	3 cut(s)	244, 566, 651
NcoI	CCATGG	2 cut(s)	1553, 1614
NdeI	CATATG	2 cut(s)	708, 855
NgoMIV	GCCGGC	1 cut(s)	178
NlaIV	GGNNCC	3 cut(s)	183, 1089, 1559
NmeAIII	GCCGAG	3 cut(s)	35, 230, 619
NmuCI	GTSAC	1 cut(s)	1024
NruI	TCGCGA	1 cut(s)	386
NsiI	ATGCAT	1 cut(s)	1762
NspI	RCATGY	4 cut(s)	773, 820, 1107, 1243
NspV	TTCGAA	1 cut(s)	529
OliI	CACNNNNGTG	1 cut(s)	1408
PaeI	GCATGC	2 cut(s)	773, 1243
PagI	TCATGA	1 cut(s)	1599
PasI	CCCWGGG	1 cut(s)	1030
PauI	GCGCGC	1 cut(s)	135
PciI	ACATGT	1 cut(s)	1103
PciSI	GCTCTTC	1 cut(s)	305
PcsI	WCGNNNNNNNCGW	2 cut(s)	127, 257
PdiI	GCCGGC	1 cut(s)	180
PfeI	GAWTC	4 cut(s)	190, 985, 1645, 1658
PfoI	TCCNGGA	2 cut(s)	242, 649
PinAI	ACCGGT	1 cut(s)	398
PkrI	GCNGC	8 cut(s)	197, 294, 297, 375, 543, 822, 910, 1683
Ple19I	CGATCG	1 cut(s)	384
PleI	GAGTC	3 cut(s)	415, 1226, 1330
PluTI	GGCGCC	1 cut(s)	185
PmaCI	CACGTG	1 cut(s)	131
PmlI	CACGTG	1 cut(s)	131
PpsI	GAGTC	3 cut(s)	415, 1226, 1330
Ppu21I	YACGTR	2 cut(s)	131, 1791
PpuMI	RGGWCCY	1 cut(s)	644
PscI	ACATGT	1 cut(s)	1103
PshAI	GACNNNNGTC	1 cut(s)	425
PshBI	ATTAAT	1 cut(s)	498
PsiI	TTATAA	1 cut(s)	872
Psp124BI	GAGCTC	3 cut(s)	10, 17, 251
Psp5II	RGGWCCY	1 cut(s)	644
Psp6I	CCWGG	1 cut(s)	1029
PspCI	CACGTG	1 cut(s)	131
PspFI	CCCAGC	1 cut(s)	1181
PspGI	CCWGG	1 cut(s)	1029
PspN4I	GGNNCC	3 cut(s)	183, 1089, 1559
PspPI	GGNCC	2 cut(s)	644, 1088
PspPPI	RGGWCCY	1 cut(s)	644
PstNI	CAGNNNCTG	1 cut(s)	1823
PsuI	RGATCY	5 cut(s)	439, 1336, 1342, 1428, 1557
PteI	GCGCGC	1 cut(s)	135
PvuI	CGATCG	1 cut(s)	384
RruI	TCGCGA	1 cut(s)	386
RsaI	GTAC	1 cut(s)	323
RsaNI	GTAC	1 cut(s)	322
RseI	CAYNNNNRTG	2 cut(s)	1102, 1408
SacI	GAGCTC	3 cut(s)	10, 17, 251
SapI	GCTCTTC	1 cut(s)	305
SaqAI	TTAA	1 cut(s)	498
SatI	GCNGC	8 cut(s)	196, 293, 296, 374, 542, 821, 909, 1682
Sau96I	GGNCC	2 cut(s)	644, 1088
SchI	GAGTC	3 cut(s)	415, 1226, 1331
ScrFI	CCNGG	4 cut(s)	244, 566, 651, 1031
SduI	GDGCHC	3 cut(s)	10, 17, 251
SfcI	CTRYAG	1 cut(s)	1296
SfoI	GGCGCC	1 cut(s)	183
SfuI	TTCGAA	1 cut(s)	529
SgrAI	CRCCGGYG	1 cut(s)	178
SinI	GGWCC	1 cut(s)	644
SmiMI	CAYNNNNRTG	2 cut(s)	1102, 1408
SmlI	CTYRAG	1 cut(s)	1472
SmoI	CTYRAG	1 cut(s)	1472
SpeI	ACTAGT	1 cut(s)	940
SphI	GCATGC	2 cut(s)	773, 1243
SsiI	CCGC	6 cut(s)	196, 265, 373, 578, 604, 767
SspDI	GGCGCC	1 cut(s)	181
SspI	AATATT	1 cut(s)	829
SspMI	CTAG	6 cut(s)	687, 941, 1178, 1311, 1340, 1362
SstI	GAGCTC	3 cut(s)	10, 17, 251
StyD4I	CCNGG	4 cut(s)	242, 564, 649, 1029
StyI	CCWWGG	2 cut(s)	1553, 1614
TaaI	ACNGT	2 cut(s)	488, 1165
TaiI	ACGT	3 cut(s)	133, 263, 1793
TaqI	TCGA	6 cut(s)	33, 236, 529, 1755, 1851, 1862
TatI	WGTACW	1 cut(s)	321
TauI	GCSGC	2 cut(s)	198, 376
TfiI	GAWTC	4 cut(s)	190, 985, 1645, 1658
Tru1I	TTAA	1 cut(s)	498
Tru9I	TTAA	1 cut(s)	498
TscAI	CASTG	2 cut(s)	1381, 1413
TseFI	GTSAC	1 cut(s)	1024
TseI	GCWGC	6 cut(s)	292, 295, 541, 820, 908, 1681
Tsp45I	GTSAC	1 cut(s)	1024
TspDTI	ATGAA	9 cut(s)	323, 450, 725, 894, 1053, 1133, 1494, 1556, 1616
TspGWI	ACGGA	3 cut(s)	219, 284, 1550
TspRI	CASTG	2 cut(s)	1381, 1413
VpaK11BI	GGWCC	1 cut(s)	644
VspI	ATTAAT	1 cut(s)	498
XapI	RAATTY	2 cut(s)	1133, 1574
XbaI	TCTAGA	2 cut(s)	1339, 1361
XceI	RCATGY	4 cut(s)	773, 820, 1107, 1243
XspI	CTAG	6 cut(s)	687, 941, 1178, 1311, 1340, 1362
Zsp2I	ATGCAT	1 cut(s)	1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.