FvH4_7g22580
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
17769088 .. 17772318
3231 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g22580.t1

Sequence Viewer

Length: 1371 bp
ATGAGTACTAGTGGTGGACTTCGCACAAGCGTGAAGGGGTACCTTATTGCACAACGCGTCACTGTGGCACCGGAAATAAACACAGTGCATGACAGCATATATGCAGTTAACAATTCCACTGCTGCTGAATCTGTGGATCATCCACCTGATCCACTTTCAGTTTCGGATACTTCAGCTTCATATGGGCTCAATATCTGTGATGGAAACATTCCTTGCTTGCCAATGTTGAGCTCTGCTGCAAAGGGCATGGCTTCATATGGCGCTAGAATCAAATCTGAGAGTTCACCTCACATTGTGCCTTCATCTCCTCGGACAGAGGTCGAGATCTTGCAGTCCTTCCATTTGAGGAGCTTCCACTTTAATGAGCTGAAAACAGCCACCACGAACTTCTGTCCTGATAGTATTATGGCTCAAGGTGGTCTTGCTTCTGTCTATAAGGGGTGGATTGATGCGCATTTGTTCGGAGCTGCCAAGCCTGGTACCGGCATTGCCGTTTTAATAAAGAGGTTTAGCCAACAAAGGACCCTGCAGCGTCATAAGGACTGGTTGACGGAAGTTAGCTTCCTTGGACAGTTGGGTCACCCAAACCTTGTAAAACTGATTGGTTACTGCCAAGAGGATGGCATGCGGCTTCTGGTGCATGAATTTATCCCTCAAGAAAGCCTGAACATTCATCTATATGATAGAGCTTCTCGCTTTAAACGACTTTCGTGGAACAGTCGTATGAAGATTGCCCTTGGTGCTGCCAAGGGTCTAGCATTTCTTCATAGTAACGAGGCAAAAGTGATCTATGGGGACTTTGAAACTTCCAAGATCCTTCTTGATTCAGACTATAATGCCAAACTCTATGGTTATGGTTCGGCCATTGATAGGCTTCAGGGTTATAGGAGCCGTTTCACTGAAGCGGACGTGGCTATGTATGAGGATGGGTCCTTTGATGTAGCTGCTGCTCACAGTGTGTATGCAGCTCCTGAGACTTCTAAAGTTACAGGGAGCTACTATTTCGAAGATAACTCAACCCCGAAAAGTGATGTATTCAGTTATGGGGTTGTTCTGCTTGAAATGTTATCTGGCAGACGAGCTTTCGACAATAGCAAGCCACCTAGAGAAAAAAGTTTAGTTCAATTTGCGAAAAACATTTCATCGCAAGGTGGTTCTTCCAAGCATGCCAACAAAAAAATAGTTGCACTAATCTTTGATGCTCATATTGATGGGCAGTACTATCAGAAAAGGGCACTCAAAGCGCTTAACCTTGCATTTCAGTGCATCTCATTAGAACCGCAATCCAGGCCAGACATGAATGAGGTGGTAGAAGTATTGGAGCAGCTTCAGTCCTCAAATGACTCTTTTCCGTCTCTATGCCAATTCTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

457

Amino Acids

50.25

Weight (kDa)

7.23

Isoelectric Point (pI)

45.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 136 - 440 1.3e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 158 - 438 1.5e-25 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 576
Acc16I TGCGCA 1 cut(s) 453
Acc65I GGTACC 2 cut(s) 39, 479
AccB1I GGYRCC 3 cut(s) 39, 67, 479
AccII CGCG 1 cut(s) 57
AciI CCGC 3 cut(s) 628, 905, 1280
AclWI GGATC 3 cut(s) 143, 144, 808
AcoI YGGCCR 1 cut(s) 861
AcsI RAATTY 1 cut(s) 644
AcuI CTGAAG 4 cut(s) 156, 860, 921, 1313
AdeI CACNNNGTG 2 cut(s) 295, 958
AfaI GTAC 4 cut(s) 7, 41, 481, 1220
AfeI AGCGCT 1 cut(s) 1245
AfiI CCNNNNNNNGG 2 cut(s) 482, 870
AflIII ACRYGT 1 cut(s) 55
AgsI TTSAA 3 cut(s) 803, 1061, 1124
AhlI ACTAGT 1 cut(s) 8
AjiI CACGTC 1 cut(s) 910
AjnI CCWGG 2 cut(s) 475, 1286
AleI CACNNNNGTG 1 cut(s) 29
Alw21I GWGCWC 1 cut(s) 233
Alw26I GTCTC 2 cut(s) 968, 1359
AlwI GGATC 3 cut(s) 143, 144, 808
AlwNI CAGNNNCTG 1 cut(s) 971
Aor51HI AGCGCT 1 cut(s) 1245
AoxI GGCC 2 cut(s) 861, 1289
ApeKI GCWGC 9 cut(s) 122, 236, 467, 529, 743, 944, 947, 965, 1324
ApoI RAATTY 1 cut(s) 644
Asp718I GGTACC 2 cut(s) 39, 479
AspLEI GCGC 3 cut(s) 263, 454, 1246
AspS9I GGNCC 2 cut(s) 522, 930
AsuHPI GGTGA 2 cut(s) 276, 572
AsuII TTCGAA 1 cut(s) 1005
AvaII GGWCC 2 cut(s) 522, 930
BaeGI GKGCMC 1 cut(s) 1237
BanI GGYRCC 3 cut(s) 39, 67, 479
BanII GRGCYC 2 cut(s) 189, 233
Bbv12I GWGCWC 1 cut(s) 233
BbvI GCAGC 9 cut(s) 109, 223, 454, 541, 730, 931, 934, 977, 1336
BccI CCATC 4 cut(s) 194, 614, 920, 1205
BceAI ACGGC 2 cut(s) 476, 876
BciT130I CCWGG 2 cut(s) 477, 1288
BciVI GTATCC 1 cut(s) 160
BcoDI GTCTC 2 cut(s) 968, 1359
BcuI ACTAGT 1 cut(s) 8
BfaI CTAG 5 cut(s) 9, 264, 755, 1104, 1369
BfmI CTRYAG 1 cut(s) 527
BfoI RGCGCY 2 cut(s) 264, 1247
BfuI GTATCC 1 cut(s) 160
BglII AGATCT 1 cut(s) 324
BmcAI AGTACT 2 cut(s) 7, 1220
Bme1390I CCNGG 2 cut(s) 477, 1288
Bme18I GGWCC 2 cut(s) 522, 930
BmgBI CACGTC 1 cut(s) 910
BmgT120I GGNCC 2 cut(s) 522, 930
BmiI GGNNCC 6 cut(s) 41, 69, 481, 524, 890, 931
BmrFI CCNGG 2 cut(s) 477, 1288
BmsI GCATC 3 cut(s) 439, 1189, 1275
BoxI GACNNNNGTC 1 cut(s) 317
BplI GAGNNNNNCTC 2 cut(s) 271, 303
Bpu14I TTCGAA 1 cut(s) 1005
BpuEI CTTGAG 2 cut(s) 396, 639
BsaJI CCNNGG 4 cut(s) 308, 565, 736, 747
BsaWI WCCGGW 1 cut(s) 70
Bsc4I CCNNNNNNNGG 2 cut(s) 482, 870
Bse118I RCCGGY 1 cut(s) 482
Bse1I ACTGG 1 cut(s) 548
Bse3DI GCAATG 1 cut(s) 486
BseBI CCWGG 2 cut(s) 477, 1288
BseDI CCNNGG 4 cut(s) 308, 565, 736, 747
BseGI GGATG 3 cut(s) 139, 625, 931
BseLI CCNNNNNNNGG 2 cut(s) 482, 870
BseMI GCAATG 1 cut(s) 486
BseMII CTCAG 2 cut(s) 267, 963
BseNI ACTGG 1 cut(s) 548
BseRI GAGGAG 2 cut(s) 297, 361
BseSI GKGCMC 1 cut(s) 1237
BseXI GCAGC 9 cut(s) 109, 223, 454, 541, 730, 931, 934, 977, 1336
Bsh1236I CGCG 1 cut(s) 57
BshFI GGCC 2 cut(s) 863, 1291
BshNI GGYRCC 3 cut(s) 39, 67, 479
BsiHKAI GWGCWC 1 cut(s) 233
BsiSI CCGG 2 cut(s) 71, 483
BslFI GGGAC 1 cut(s) 809
BslI CCNNNNNNNGG 2 cut(s) 482, 870
BsmAI GTCTC 2 cut(s) 968, 1359
BsmBI CGTCTC 1 cut(s) 1359
BsmFI GGGAC 1 cut(s) 809
BsnI GGCC 2 cut(s) 863, 1291
Bsp119I TTCGAA 1 cut(s) 1005
Bsp1286I GDGCHC 3 cut(s) 189, 233, 1237
Bsp143I GATC 5 cut(s) 136, 148, 324, 786, 813
BspACI CCGC 3 cut(s) 628, 905, 1280
BspANI GGCC 2 cut(s) 863, 1291
BspCNI CTCAG 2 cut(s) 268, 964
BspFNI CGCG 1 cut(s) 57
BspLI GGNNCC 6 cut(s) 41, 69, 481, 524, 890, 931
BspMAI CTGCAG 1 cut(s) 531
BspPI GGATC 3 cut(s) 143, 144, 808
BspT104I TTCGAA 1 cut(s) 1005
BspT107I GGYRCC 3 cut(s) 39, 67, 479
BsrDI GCAATG 1 cut(s) 486
BsrFI RCCGGY 1 cut(s) 482
BsrI ACTGG 1 cut(s) 548
BssAI RCCGGY 1 cut(s) 482
BssECI CCNNGG 4 cut(s) 308, 565, 736, 747
BssMI GATC 5 cut(s) 136, 148, 324, 786, 813
BssT1I CCWWGG 3 cut(s) 565, 736, 747
Bst2UI CCWGG 2 cut(s) 477, 1288
Bst4CI ACNGT 5 cut(s) 64, 85, 573, 719, 956
BstBI TTCGAA 1 cut(s) 1005
BstC8I GCNNGC 4 cut(s) 218, 626, 1097, 1167
BstDEI CTNAG 2 cut(s) 276, 972
BstEII GGTNACC 1 cut(s) 578
BstF5I GGATG 3 cut(s) 139, 625, 931
BstFNI CGCG 1 cut(s) 57
BstH2I RGCGCY 2 cut(s) 264, 1247
BstHHI GCGC 3 cut(s) 263, 454, 1246
BstKTI GATC 5 cut(s) 139, 151, 327, 789, 816
BstMAI GTCTC 2 cut(s) 968, 1359
BstMBI GATC 5 cut(s) 136, 148, 324, 786, 813
BstMWI GCNNNNNNNGC 5 cut(s) 637, 740, 911, 1241, 1288
BstNI CCWGG 2 cut(s) 477, 1288
BstNSI RCATGY 2 cut(s) 628, 1169
BstPAI GACNNNNGTC 1 cut(s) 317
BstPI GGTNACC 1 cut(s) 578
BstSCI CCNGG 2 cut(s) 475, 1286
BstSFI CTRYAG 1 cut(s) 527
BstSLI GKGCMC 1 cut(s) 1237
BstUI CGCG 1 cut(s) 57
BstV1I GCAGC 9 cut(s) 109, 223, 454, 541, 730, 931, 934, 977, 1336
BstX2I RGATCY 2 cut(s) 324, 813
BstXI CCANNNNNNTGG 1 cut(s) 620
BstYI RGATCY 2 cut(s) 324, 813
BsuI GTATCC 1 cut(s) 160
BsuRI GGCC 2 cut(s) 863, 1291
BtgZI GCGATG 1 cut(s) 1128
BtrI CACGTC 1 cut(s) 910
BtsCI GGATG 3 cut(s) 139, 625, 931
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 6 cut(s) 60, 90, 117, 897, 961, 1268
Cac8I GCNNGC 4 cut(s) 218, 626, 1097, 1167
CaiI CAGNNNCTG 1 cut(s) 971
CfoI GCGC 3 cut(s) 263, 454, 1246
Cfr10I RCCGGY 1 cut(s) 482
Cfr13I GGNCC 2 cut(s) 522, 930
CseI GACGC 2 cut(s) 46, 521
Csp6I GTAC 4 cut(s) 6, 40, 480, 1219
CviAII CATG 6 cut(s) 89, 247, 625, 641, 1166, 1297
CviQI GTAC 4 cut(s) 6, 40, 480, 1219
DdeI CTNAG 2 cut(s) 276, 972
DpnI GATC 5 cut(s) 138, 150, 326, 788, 815
DpnII GATC 5 cut(s) 136, 148, 324, 786, 813
DraI TTTAAA 1 cut(s) 700
DraIII CACNNNGTG 2 cut(s) 295, 958
DrdI GACNNNNNNGTC 1 cut(s) 576
DseDI GACNNNNNNGTC 1 cut(s) 576
EaeI YGGCCR 1 cut(s) 861
Ecl136II GAGCTC 1 cut(s) 231
Eco130I CCWWGG 3 cut(s) 565, 736, 747
Eco24I GRGCYC 2 cut(s) 189, 233
Eco47I GGWCC 2 cut(s) 522, 930
Eco47III AGCGCT 1 cut(s) 1245
Eco53kI GAGCTC 1 cut(s) 231
Eco57I CTGAAG 4 cut(s) 156, 860, 921, 1313
Eco91I GGTNACC 1 cut(s) 578
EcoICRI GAGCTC 1 cut(s) 231
EcoO109I RGGNCCY 2 cut(s) 522, 930
EcoO65I GGTNACC 1 cut(s) 578
EcoRII CCWGG 2 cut(s) 475, 1286
EcoT14I CCWWGG 3 cut(s) 565, 736, 747
EcoT38I GRGCYC 2 cut(s) 189, 233
ErhI CCWWGG 3 cut(s) 565, 736, 747
Esp3I CGTCTC 1 cut(s) 1359
FaeI CATG 6 cut(s) 92, 250, 628, 644, 1169, 1300
FalI AAGNNNNNCTT 2 cut(s) 405, 437
FaqI GGGAC 1 cut(s) 809
FatI CATG 6 cut(s) 88, 246, 624, 640, 1165, 1296
FauNDI CATATG 2 cut(s) 181, 256
FokI GGATG 3 cut(s) 126, 632, 938
FriOI GRGCYC 2 cut(s) 189, 233
FspAI RTGCGCAY 1 cut(s) 453
FspBI CTAG 5 cut(s) 9, 264, 755, 1104, 1369
FspI TGCGCA 1 cut(s) 453
GlaI GCGC 3 cut(s) 262, 453, 1245
HaeII RGCGCY 2 cut(s) 264, 1247
HaeIII GGCC 2 cut(s) 863, 1291
HapII CCGG 2 cut(s) 71, 483
HgaI GACGC 2 cut(s) 46, 521
HhaI GCGC 3 cut(s) 263, 454, 1246
Hin1II CATG 6 cut(s) 92, 250, 628, 644, 1169, 1300
Hin6I GCGC 3 cut(s) 261, 452, 1244
HinP1I GCGC 3 cut(s) 261, 452, 1244
HincII GTYRAC 2 cut(s) 109, 549
HindII GTYRAC 2 cut(s) 109, 549
HinfI GANTC 4 cut(s) 128, 267, 824, 1343
HpaI GTTAAC 1 cut(s) 109
HpaII CCGG 2 cut(s) 71, 483
HphI GGTGA 2 cut(s) 276, 572
Hpy166II GTNNAC 4 cut(s) 17, 109, 284, 549
Hpy188I TCNGA 6 cut(s) 166, 277, 312, 464, 829, 1227
Hpy188III TCNNGA 5 cut(s) 322, 395, 656, 821, 971
Hpy8I GTNNAC 4 cut(s) 17, 109, 284, 549
HpyAV CCTTC 4 cut(s) 28, 309, 346, 827
HpyCH4III ACNGT 5 cut(s) 64, 85, 573, 719, 956
HpyCH4IV ACGT 1 cut(s) 909
HpyF10VI GCNNNNNNNGC 5 cut(s) 637, 740, 911, 1241, 1288
HpyF3I CTNAG 2 cut(s) 276, 972
HpySE526I ACGT 1 cut(s) 909
Hsp92II CATG 6 cut(s) 92, 250, 628, 644, 1169, 1300
HspAI GCGC 3 cut(s) 261, 452, 1244
KpnI GGTACC 2 cut(s) 43, 483
KspAI GTTAAC 1 cut(s) 109
Kzo9I GATC 5 cut(s) 136, 148, 324, 786, 813
LmnI GCTCC 6 cut(s) 348, 464, 888, 973, 993, 1321
Lsp1109I GCAGC 9 cut(s) 109, 223, 454, 541, 730, 931, 934, 977, 1336
LweI GCATC 3 cut(s) 439, 1189, 1275
MaeI CTAG 5 cut(s) 9, 264, 755, 1104, 1369
MaeII ACGT 1 cut(s) 909
MaeIII GTNAC 5 cut(s) 58, 578, 605, 770, 985
MalI GATC 5 cut(s) 138, 150, 326, 788, 815
MboI GATC 5 cut(s) 136, 148, 324, 786, 813
MboII GAAGA 4 cut(s) 739, 755, 1019, 1149
MflI RGATCY 2 cut(s) 324, 813
MhlI GDGCHC 3 cut(s) 189, 233, 1237
MluCI AATT 4 cut(s) 112, 644, 1124, 1364
MluI ACGCGT 1 cut(s) 55
MlyI GAGTC 1 cut(s) 1337
MseI TTAA 5 cut(s) 108, 360, 497, 699, 1248
MslI CAYNNNNRTG 5 cut(s) 29, 360, 678, 1209, 1261
MspI CCGG 2 cut(s) 71, 483
MspR9I CCNGG 2 cut(s) 477, 1288
MvaI CCWGG 2 cut(s) 477, 1288
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 5 cut(s) 637, 740, 911, 1241, 1288
NdeI CATATG 2 cut(s) 181, 256
NdeII GATC 5 cut(s) 136, 148, 324, 786, 813
NlaIII CATG 6 cut(s) 92, 250, 628, 644, 1169, 1300
NlaIV GGNNCC 6 cut(s) 41, 69, 481, 524, 890, 931
NmuCI GTSAC 2 cut(s) 58, 578
NsbI TGCGCA 1 cut(s) 453
NspI RCATGY 2 cut(s) 628, 1169
NspV TTCGAA 1 cut(s) 1005
OliI CACNNNNGTG 1 cut(s) 29
PaeI GCATGC 2 cut(s) 628, 1169
PcsI WCGNNNNNNNCGW 1 cut(s) 700
PfeI GAWTC 3 cut(s) 128, 267, 824
PleI GAGTC 1 cut(s) 1337
PpsI GAGTC 1 cut(s) 1337
PpuMI RGGWCCY 2 cut(s) 522, 930
PshAI GACNNNNGTC 1 cut(s) 317
Psp124BI GAGCTC 1 cut(s) 233
Psp5II RGGWCCY 2 cut(s) 522, 930
Psp6I CCWGG 2 cut(s) 475, 1286
PspEI GGTNACC 1 cut(s) 578
PspGI CCWGG 2 cut(s) 475, 1286
PspN4I GGNNCC 6 cut(s) 41, 69, 481, 524, 890, 931
PspPI GGNCC 2 cut(s) 522, 930
PspPPI RGGWCCY 2 cut(s) 522, 930
PstI CTGCAG 1 cut(s) 531
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 2 cut(s) 324, 813
RsaI GTAC 4 cut(s) 7, 41, 481, 1220
RsaNI GTAC 4 cut(s) 6, 40, 480, 1219
RseI CAYNNNNRTG 5 cut(s) 29, 360, 678, 1209, 1261
SacI GAGCTC 1 cut(s) 233
SaqAI TTAA 5 cut(s) 108, 360, 497, 699, 1248
Sau3AI GATC 5 cut(s) 136, 148, 324, 786, 813
Sau96I GGNCC 2 cut(s) 522, 930
ScaI AGTACT 2 cut(s) 7, 1220
SchI GAGTC 1 cut(s) 1337
ScrFI CCNGG 2 cut(s) 477, 1288
SduI GDGCHC 3 cut(s) 189, 233, 1237
SfaNI GCATC 3 cut(s) 439, 1189, 1275
SfcI CTRYAG 1 cut(s) 527
SfuI TTCGAA 1 cut(s) 1005
SinI GGWCC 2 cut(s) 522, 930
SmiMI CAYNNNNRTG 5 cut(s) 29, 360, 678, 1209, 1261
SmlI CTYRAG 2 cut(s) 411, 654
SmoI CTYRAG 2 cut(s) 411, 654
SpeI ACTAGT 1 cut(s) 8
SphI GCATGC 2 cut(s) 628, 1169
Sse9I AATT 4 cut(s) 112, 644, 1124, 1364
SsiI CCGC 3 cut(s) 628, 905, 1280
SspMI CTAG 5 cut(s) 9, 264, 755, 1104, 1369
SstI GAGCTC 1 cut(s) 233
StyD4I CCNGG 2 cut(s) 475, 1286
StyI CCWWGG 3 cut(s) 565, 736, 747
TaaI ACNGT 5 cut(s) 64, 85, 573, 719, 956
TaiI ACGT 1 cut(s) 912
TaqI TCGA 3 cut(s) 321, 1005, 1086
TasI AATT 4 cut(s) 112, 644, 1124, 1364
TatI WGTACW 2 cut(s) 5, 1218
TauI GCSGC 1 cut(s) 631
TfiI GAWTC 3 cut(s) 128, 267, 824
Tru1I TTAA 5 cut(s) 108, 360, 497, 699, 1248
Tru9I TTAA 5 cut(s) 108, 360, 497, 699, 1248
TscAI CASTG 6 cut(s) 67, 90, 124, 904, 961, 1268
TseFI GTSAC 2 cut(s) 58, 578
TseI GCWGC 9 cut(s) 122, 236, 467, 529, 743, 944, 947, 965, 1324
Tsp45I GTSAC 2 cut(s) 58, 578
TspDTI ATGAA 9 cut(s) 168, 243, 291, 657, 662, 740, 755, 1131, 1313
TspGWI ACGGA 2 cut(s) 566, 1341
TspRI CASTG 6 cut(s) 67, 90, 124, 904, 961, 1268
VpaK11BI GGWCC 2 cut(s) 522, 930
XapI RAATTY 1 cut(s) 644
XceI RCATGY 2 cut(s) 628, 1169
XspI CTAG 5 cut(s) 9, 264, 755, 1104, 1369
ZrmI AGTACT 2 cut(s) 7, 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.