Rmu_sc0014291.1_g000003
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014291.1
Physical Location & Seq
Reverse (-)
9128 .. 13631
4504 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014291.1_g000003.1.cds

Sequence Viewer

Length: 1527 bp
atggatacttacttgttggttttggatcacgcgcgtgtcgatgcaggcgtgatggatcgaagtaatccgagtagaggcgtgcagcgaatgcggggcagcaggggctgcggtggtagtagtggtgcaggagtagcggaggcaaactgcaggggcagcagcagtggtgtagggctgcaggtgcacgggtgcgtaggcggggcagcagcgtgcgcaggtgtgcgcggggaagcagtgtgcgcaggtgtgcgggcagcacggagcgcaggggcgcgcaatgagcaggctgcagcgaaggcttggctagctcgggctaggggctgctggggcagtaggcacgcagcacaggaaataaacacagtgcatgacgatgagacgagcataaatgtaacttgcaattccactgctgctgattctgtggatcatccacctccactttcagttcccgagacttcagcttcatacgggctcagtatctgtgacggaaatattccttgtttcccaatgtggagctctgctgcaaagagcatggcttcatatggtgctagaaccaaatctaatagtctgcctcacaatgttccttcatctcctcagtcagaggttgagatccctcagacagaggtcgtgaccttgcagtccttccatttgaggagcttccactttaatgagctgaaaacagccaccacaaacttctgtcgacctgatagtattatggctcaaggtggtcttggttctgtctataaggggtggatttatgagcattcgttcacagctggcgagcctggtaccagcattgccgttgtaataaagaggtttagccaacaaaggaccctgcagagtcagaaggactggttgattgcccttggtgctgccaagggtctagcatttcttcatagtaatgaggcaaaagtgatttatggggactttgaaacttccaatatccttcttgattcagactataatgccaaactccatggttatggttcggccatggaaaggcttcaaggttataggagccatgtctcagaagcggacatggcaatgtatgaggacaatgtctttcctgctgctcacagtgtgtatgcagctcctgagacttctaatgttacatgggactggtctttcgaagatcacttaaccccgaaaagtgatgtatacagttatggggttgttctgctcgaaatgttatctggcagaagtgcttttgacagtagcaggtcccttagagaagaaactttacttcaatttgcgaaaaagatttcttcgcaaggtggttctgccaagtatgccagcaaacgcgacattgcacacttttttgatgctcatattgatgggcagtactctacggacaggggtctcgaagcacttaaccttgcaattcagtgcatctcaaacgaaccggtgtccaggccaaacatgaatgaggtggtagagatattggagcagattggagcagattcagtcgtcaaaatgaaactttctaaaatctctatgtcaattcaaggaatgctctcagatatcttgttttga
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

508

Amino Acids

54.63

Weight (kDa)

6.06

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 166, 203, 230
AasI GACNNNNNNGTC 1 cut(s) 631
Acc16I TGCGCA 2 cut(s) 211, 238
Acc36I ACCTGC 4 cut(s) 166, 203, 230, 1203
Acc65I GGTACC 1 cut(s) 782
AccB1I GGYRCC 1 cut(s) 782
AccI GTMKAC 2 cut(s) 694, 1152
AccII CGCG 5 cut(s) 32, 34, 222, 271, 1296
AciI CCGC 7 cut(s) 91, 108, 134, 195, 222, 247, 1028
AclWI GGATC 4 cut(s) 33, 63, 426, 598
AcoI YGGCCR 1 cut(s) 984
AcuI CTGAAG 1 cut(s) 435
AdeI CACNNNGTG 1 cut(s) 1075
AfaI GTAC 2 cut(s) 784, 1337
AfiI CCNNNNNNNGG 2 cut(s) 74, 993
AgeI ACCGGT 1 cut(s) 1396
AgsI TTSAA 4 cut(s) 926, 1001, 1241, 1499
AjnI CCWGG 2 cut(s) 778, 1403
AleI CACNNNNGTG 1 cut(s) 33
AluBI AGCT 7 cut(s) 305, 455, 510, 651, 667, 770, 1085
AluI AGCT 7 cut(s) 305, 455, 510, 651, 667, 770, 1085
Alw21I GWGCWC 2 cut(s) 183, 512
Alw26I GTCTC 5 cut(s) 365, 440, 1024, 1085, 1358
Alw44I GTGCAC 1 cut(s) 179
AlwI GGATC 4 cut(s) 33, 63, 426, 598
AlwNI CAGNNNCTG 3 cut(s) 105, 474, 1088
Ama87I CYCGRG 2 cut(s) 306, 443
AoxI GGCC 2 cut(s) 984, 1406
ApaLI GTGCAC 1 cut(s) 179
ArsI GACNNNNNNTTYG 2 cut(s) 1103, 1135
AsiGI ACCGGT 1 cut(s) 1396
Asp700I GAANNNNTTC 1 cut(s) 996
Asp718I GGTACC 1 cut(s) 782
AspLEI GCGC 7 cut(s) 34, 212, 222, 239, 263, 271, 273
AspS9I GGNCC 2 cut(s) 825, 1215
AsuII TTCGAA 1 cut(s) 1122
AsuNHI GCTAGC 1 cut(s) 301
AvaI CYCGRG 2 cut(s) 306, 443
AvaII GGWCC 2 cut(s) 825, 1215
BaeGI GKGCMC 1 cut(s) 183
BanI GGYRCC 1 cut(s) 782
BanII GRGCYC 2 cut(s) 468, 512
BarI GAAGNNNNNNTAC 2 cut(s) 1218, 1250
Bbv12I GWGCWC 2 cut(s) 183, 512
BccI CCATC 2 cut(s) 46, 1322
BceAI ACGGC 1 cut(s) 779
BciT130I CCWGG 2 cut(s) 780, 1405
BcoDI GTCTC 5 cut(s) 365, 440, 1024, 1085, 1358
BfaI CTAG 4 cut(s) 302, 312, 543, 878
BfmI CTRYAG 4 cut(s) 145, 173, 285, 830
BfuAI ACCTGC 4 cut(s) 166, 203, 230, 1203
BmcAI AGTACT 1 cut(s) 1337
Bme1390I CCNGG 2 cut(s) 780, 1405
Bme18I GGWCC 2 cut(s) 825, 1215
BmeT110I CYCGRG 2 cut(s) 306, 443
BmgT120I GGNCC 2 cut(s) 825, 1215
BmiI GGNNCC 4 cut(s) 784, 827, 1013, 1217
BmrFI CCNGG 2 cut(s) 780, 1405
BmsI GCATC 3 cut(s) 31, 1306, 1392
BmtI GCTAGC 1 cut(s) 305
BoxI GACNNNNGTC 2 cut(s) 617, 1350
Bpu14I TTCGAA 1 cut(s) 1122
BpuEI CTTGAG 1 cut(s) 699
BsaI GGTCTC 1 cut(s) 1358
BsaJI CCNNGG 4 cut(s) 859, 870, 970, 987
BsaWI WCCGGW 1 cut(s) 1396
Bsc4I CCNNNNNNNGG 2 cut(s) 74, 993
Bse118I RCCGGY 1 cut(s) 1396
Bse1I ACTGG 2 cut(s) 851, 1118
Bse3DI GCAATG 4 cut(s) 280, 789, 1044, 1299
BseBI CCWGG 2 cut(s) 780, 1405
BseDI CCNNGG 4 cut(s) 859, 870, 970, 987
BseGI GGATG 1 cut(s) 421
BseLI CCNNNNNNNGG 2 cut(s) 74, 993
BseMI GCAATG 4 cut(s) 280, 789, 1044, 1299
BseMII CTCAG 6 cut(s) 481, 602, 623, 1035, 1080, 1524
BseNI ACTGG 2 cut(s) 851, 1118
BsePI GCGCGC 1 cut(s) 269
BseRI GAGGAG 2 cut(s) 576, 661
BseSI GKGCMC 1 cut(s) 183
BseYI CCCAGC 1 cut(s) 321
BsgI GTGCAG 2 cut(s) 101, 144
Bsh1236I CGCG 5 cut(s) 32, 34, 222, 271, 1296
BshFI GGCC 2 cut(s) 986, 1408
BshNI GGYRCC 1 cut(s) 782
BshTI ACCGGT 1 cut(s) 1396
BsiHKAI GWGCWC 2 cut(s) 183, 512
BsiHKCI CYCGRG 2 cut(s) 306, 443
BsiSI CCGG 1 cut(s) 1397
BslFI GGGAC 3 cut(s) 932, 1124, 1201
BslI CCNNNNNNNGG 2 cut(s) 74, 993
BsmAI GTCTC 5 cut(s) 365, 440, 1024, 1085, 1358
BsmBI CGTCTC 1 cut(s) 365
BsmFI GGGAC 3 cut(s) 932, 1124, 1201
BsmI GAATGC 3 cut(s) 93, 757, 1509
BsnI GGCC 2 cut(s) 986, 1408
Bso31I GGTCTC 1 cut(s) 1358
BsoBI CYCGRG 2 cut(s) 306, 443
Bsp119I TTCGAA 1 cut(s) 1122
Bsp1286I GDGCHC 3 cut(s) 183, 468, 512
Bsp143I GATC 5 cut(s) 25, 55, 418, 603, 1126
Bsp19I CCATGG 2 cut(s) 970, 987
BspACI CCGC 7 cut(s) 91, 108, 134, 195, 222, 247, 1028
BspANI GGCC 2 cut(s) 986, 1408
BspCNI CTCAG 6 cut(s) 480, 601, 622, 1034, 1081, 1523
BspFNI CGCG 5 cut(s) 32, 34, 222, 271, 1296
BspLI GGNNCC 4 cut(s) 784, 827, 1013, 1217
BspMAI CTGCAG 4 cut(s) 149, 177, 289, 834
BspMI ACCTGC 4 cut(s) 166, 203, 230, 1203
BspOI GCTAGC 1 cut(s) 305
BspPI GGATC 4 cut(s) 33, 63, 426, 598
BspT104I TTCGAA 1 cut(s) 1122
BspT107I GGYRCC 1 cut(s) 782
BspTNI GGTCTC 1 cut(s) 1358
BsrDI GCAATG 4 cut(s) 280, 789, 1044, 1299
BsrFI RCCGGY 1 cut(s) 1396
BsrI ACTGG 2 cut(s) 851, 1118
BssAI RCCGGY 1 cut(s) 1396
BssECI CCNNGG 4 cut(s) 859, 870, 970, 987
BssHII GCGCGC 1 cut(s) 269
BssMI GATC 5 cut(s) 25, 55, 418, 603, 1126
BssNAI GTATAC 1 cut(s) 1153
BssT1I CCWWGG 4 cut(s) 859, 870, 970, 987
Bst1107I GTATAC 1 cut(s) 1153
Bst2UI CCWGG 2 cut(s) 780, 1405
Bst4CI ACNGT 4 cut(s) 358, 1073, 1157, 1208
BstAPI GCANNNNNTGC 2 cut(s) 88, 105
BstBI TTCGAA 1 cut(s) 1122
BstDEI CTNAG 7 cut(s) 467, 588, 609, 1021, 1089, 1220, 1510
BstDSI CCRYGG 2 cut(s) 970, 987
BstF5I GGATG 1 cut(s) 421
BstFNI CGCG 5 cut(s) 32, 34, 222, 271, 1296
BstHHI GCGC 7 cut(s) 34, 212, 222, 239, 263, 271, 273
BstKTI GATC 5 cut(s) 28, 58, 421, 606, 1129
BstMAI GTCTC 5 cut(s) 365, 440, 1024, 1085, 1358
BstMBI GATC 5 cut(s) 25, 55, 418, 603, 1126
BstNI CCWGG 2 cut(s) 780, 1405
BstPAI GACNNNNGTC 2 cut(s) 617, 1350
BstSCI CCNGG 2 cut(s) 778, 1403
BstSFI CTRYAG 4 cut(s) 145, 173, 285, 830
BstSLI GKGCMC 1 cut(s) 183
BstUI CGCG 5 cut(s) 32, 34, 222, 271, 1296
BstX2I RGATCY 1 cut(s) 603
BstXI CCANNNNNNTGG 1 cut(s) 977
BstYI RGATCY 1 cut(s) 603
BstZ17I GTATAC 1 cut(s) 1153
BsuRI GGCC 2 cut(s) 986, 1408
BtgI CCRYGG 2 cut(s) 970, 987
BtsCI GGATG 1 cut(s) 421
BtsI GCAGTG 3 cut(s) 166, 237, 399
BtsIMutI CAGTG 6 cut(s) 166, 237, 363, 399, 1078, 1385
BveI ACCTGC 4 cut(s) 166, 203, 230, 1203
CaiI CAGNNNCTG 3 cut(s) 105, 474, 1088
CfoI GCGC 7 cut(s) 34, 212, 222, 239, 263, 271, 273
Cfr10I RCCGGY 1 cut(s) 1396
Cfr13I GGNCC 2 cut(s) 825, 1215
Csp6I GTAC 2 cut(s) 783, 1336
CspAI ACCGGT 1 cut(s) 1396
CviAII CATG 8 cut(s) 362, 526, 971, 988, 1016, 1033, 1107, 1414
CviQI GTAC 2 cut(s) 783, 1336
DdeI CTNAG 7 cut(s) 467, 588, 609, 1021, 1089, 1220, 1510
DpnI GATC 5 cut(s) 27, 57, 420, 605, 1128
DpnII GATC 5 cut(s) 25, 55, 418, 603, 1126
DraIII CACNNNGTG 1 cut(s) 1075
DrdI GACNNNNNNGTC 1 cut(s) 631
DseDI GACNNNNNNGTC 1 cut(s) 631
EaeI YGGCCR 1 cut(s) 984
Ecl136II GAGCTC 1 cut(s) 510
Eco130I CCWWGG 4 cut(s) 859, 870, 970, 987
Eco24I GRGCYC 2 cut(s) 468, 512
Eco31I GGTCTC 1 cut(s) 1358
Eco32I GATATC 1 cut(s) 1516
Eco47I GGWCC 2 cut(s) 825, 1215
Eco53kI GAGCTC 1 cut(s) 510
Eco57I CTGAAG 1 cut(s) 435
Eco88I CYCGRG 2 cut(s) 306, 443
EcoICRI GAGCTC 1 cut(s) 510
EcoO109I RGGNCCY 2 cut(s) 825, 1215
EcoRII CCWGG 2 cut(s) 778, 1403
EcoRV GATATC 1 cut(s) 1516
EcoT14I CCWWGG 4 cut(s) 859, 870, 970, 987
EcoT38I GRGCYC 2 cut(s) 468, 512
ErhI CCWWGG 4 cut(s) 859, 870, 970, 987
Esp3I CGTCTC 1 cut(s) 365
FaeI CATG 8 cut(s) 365, 529, 974, 991, 1019, 1036, 1110, 1417
FalI AAGNNNNNCTT 2 cut(s) 708, 740
FaqI GGGAC 3 cut(s) 932, 1124, 1201
FatI CATG 8 cut(s) 361, 525, 970, 987, 1015, 1032, 1106, 1413
FauI CCCGC 4 cut(s) 84, 188, 215, 240
FauNDI CATATG 1 cut(s) 535
FblI GTMKAC 2 cut(s) 694, 1152
FokI GGATG 1 cut(s) 408
FriOI GRGCYC 2 cut(s) 468, 512
FspBI CTAG 4 cut(s) 302, 312, 543, 878
FspI TGCGCA 2 cut(s) 211, 238
GlaI GCGC 7 cut(s) 33, 211, 221, 238, 262, 270, 272
GsaI CCCAGC 1 cut(s) 325
HaeIII GGCC 2 cut(s) 986, 1408
HapII CCGG 1 cut(s) 1397
HhaI GCGC 7 cut(s) 34, 212, 222, 239, 263, 271, 273
Hin1II CATG 8 cut(s) 365, 529, 974, 991, 1019, 1036, 1110, 1417
Hin6I GCGC 7 cut(s) 32, 210, 220, 237, 261, 269, 271
HinP1I GCGC 7 cut(s) 32, 210, 220, 237, 261, 269, 271
HincII GTYRAC 1 cut(s) 695
HindII GTYRAC 1 cut(s) 695
HinfI GANTC 4 cut(s) 410, 835, 947, 1454
HpaII CCGG 1 cut(s) 1397
Hpy166II GTNNAC 4 cut(s) 181, 695, 765, 1153
Hpy188I TCNGA 7 cut(s) 69, 595, 612, 840, 952, 1024, 1513
Hpy188III TCNNGA 5 cut(s) 443, 622, 944, 1088, 1355
Hpy8I GTNNAC 4 cut(s) 181, 695, 765, 1153
HpyAV CCTTC 5 cut(s) 286, 588, 646, 835, 950
HpyCH4III ACNGT 4 cut(s) 358, 1073, 1157, 1208
HpyF3I CTNAG 7 cut(s) 467, 588, 609, 1021, 1089, 1220, 1510
Hsp92II CATG 8 cut(s) 365, 529, 974, 991, 1019, 1036, 1110, 1417
HspAI GCGC 7 cut(s) 32, 210, 220, 237, 261, 269, 271
KpnI GGTACC 1 cut(s) 786
Kzo9I GATC 5 cut(s) 25, 55, 418, 603, 1126
LmnI GCTCC 7 cut(s) 258, 507, 648, 1011, 1090, 1438, 1448
LweI GCATC 3 cut(s) 31, 1306, 1392
MaeI CTAG 4 cut(s) 302, 312, 543, 878
MaeIII GTNAC 4 cut(s) 385, 476, 622, 1102
MalI GATC 5 cut(s) 27, 57, 420, 605, 1128
MboI GATC 5 cut(s) 25, 55, 418, 603, 1126
MboII GAAGA 4 cut(s) 878, 1136, 1238, 1251
MflI RGATCY 1 cut(s) 603
MhlI GDGCHC 3 cut(s) 183, 468, 512
MluCI AATT 4 cut(s) 394, 1241, 1374, 1494
MlyI GAGTC 1 cut(s) 844
MroXI GAANNNNTTC 1 cut(s) 996
MseI TTAA 3 cut(s) 660, 1133, 1365
MslI CAYNNNNRTG 7 cut(s) 33, 366, 660, 894, 975, 1037, 1326
MspA1I CMGCKG 1 cut(s) 770
MspI CCGG 1 cut(s) 1397
MspR9I CCNGG 2 cut(s) 780, 1405
Mva1269I GAATGC 3 cut(s) 93, 757, 1509
MvaI CCWGG 2 cut(s) 780, 1405
MvnI CGCG 5 cut(s) 32, 34, 222, 271, 1296
NcoI CCATGG 2 cut(s) 970, 987
NdeI CATATG 1 cut(s) 535
NdeII GATC 5 cut(s) 25, 55, 418, 603, 1126
NheI GCTAGC 1 cut(s) 301
NlaIII CATG 8 cut(s) 365, 529, 974, 991, 1019, 1036, 1110, 1417
NlaIV GGNNCC 4 cut(s) 784, 827, 1013, 1217
NmuCI GTSAC 2 cut(s) 476, 622
NsbI TGCGCA 2 cut(s) 211, 238
NspV TTCGAA 1 cut(s) 1122
OliI CACNNNNGTG 1 cut(s) 33
PaqCI CACCTGC 3 cut(s) 166, 203, 230
PauI GCGCGC 1 cut(s) 269
PcsI WCGNNNNNNNCGW 2 cut(s) 36, 45
PctI GAATGC 3 cut(s) 93, 757, 1509
PdmI GAANNNNTTC 1 cut(s) 996
PfeI GAWTC 3 cut(s) 410, 947, 1454
PflFI GACNNNGTC 1 cut(s) 1052
PinAI ACCGGT 1 cut(s) 1396
PleI GAGTC 1 cut(s) 843
PpsI GAGTC 1 cut(s) 843
PpuMI RGGWCCY 2 cut(s) 825, 1215
PshAI GACNNNNGTC 2 cut(s) 617, 1350
Psp124BI GAGCTC 1 cut(s) 512
Psp5II RGGWCCY 2 cut(s) 825, 1215
Psp6I CCWGG 2 cut(s) 778, 1403
PspFI CCCAGC 1 cut(s) 321
PspGI CCWGG 2 cut(s) 778, 1403
PspN4I GGNNCC 4 cut(s) 784, 827, 1013, 1217
PspPI GGNCC 2 cut(s) 825, 1215
PspPPI RGGWCCY 2 cut(s) 825, 1215
PstI CTGCAG 4 cut(s) 149, 177, 289, 834
PstNI CAGNNNCTG 3 cut(s) 105, 474, 1088
PsuI RGATCY 1 cut(s) 603
PsyI GACNNNGTC 1 cut(s) 1052
PteI GCGCGC 1 cut(s) 269
PvuII CAGCTG 1 cut(s) 770
RsaI GTAC 2 cut(s) 784, 1337
RsaNI GTAC 2 cut(s) 783, 1336
RseI CAYNNNNRTG 7 cut(s) 33, 366, 660, 894, 975, 1037, 1326
SacI GAGCTC 1 cut(s) 512
SalI GTCGAC 1 cut(s) 693
SaqAI TTAA 3 cut(s) 660, 1133, 1365
Sau3AI GATC 5 cut(s) 25, 55, 418, 603, 1126
Sau96I GGNCC 2 cut(s) 825, 1215
ScaI AGTACT 1 cut(s) 1337
SchI GAGTC 1 cut(s) 844
ScrFI CCNGG 2 cut(s) 780, 1405
SduI GDGCHC 3 cut(s) 183, 468, 512
SfaNI GCATC 3 cut(s) 31, 1306, 1392
SfcI CTRYAG 4 cut(s) 145, 173, 285, 830
SfuI TTCGAA 1 cut(s) 1122
SinI GGWCC 2 cut(s) 825, 1215
SmiMI CAYNNNNRTG 7 cut(s) 33, 366, 660, 894, 975, 1037, 1326
SmlI CTYRAG 1 cut(s) 714
SmoI CTYRAG 1 cut(s) 714
Sse9I AATT 4 cut(s) 394, 1241, 1374, 1494
SsiI CCGC 7 cut(s) 91, 108, 134, 195, 222, 247, 1028
SspI AATATT 1 cut(s) 487
SspMI CTAG 4 cut(s) 302, 312, 543, 878
SstI GAGCTC 1 cut(s) 512
StyD4I CCNGG 2 cut(s) 778, 1403
StyI CCWWGG 4 cut(s) 859, 870, 970, 987
TaaI ACNGT 4 cut(s) 358, 1073, 1157, 1208
TaqI TCGA 6 cut(s) 39, 58, 694, 1122, 1176, 1356
TasI AATT 4 cut(s) 394, 1241, 1374, 1494
TatI WGTACW 1 cut(s) 1335
TfiI GAWTC 3 cut(s) 410, 947, 1454
Tru1I TTAA 3 cut(s) 660, 1133, 1365
Tru9I TTAA 3 cut(s) 660, 1133, 1365
TscAI CASTG 6 cut(s) 166, 237, 363, 406, 1078, 1385
TseFI GTSAC 2 cut(s) 476, 622
Tsp45I GTSAC 2 cut(s) 476, 622
TspDTI ATGAA 6 cut(s) 447, 522, 570, 878, 1430, 1484
TspGWI ACGGA 3 cut(s) 271, 495, 1358
TspRI CASTG 6 cut(s) 166, 237, 363, 406, 1078, 1385
Tth111I GACNNNGTC 1 cut(s) 1052
VneI GTGCAC 1 cut(s) 179
VpaK11BI GGWCC 2 cut(s) 825, 1215
XmiI GTMKAC 2 cut(s) 694, 1152
XmnI GAANNNNTTC 1 cut(s) 996
XspI CTAG 4 cut(s) 302, 312, 543, 878
ZrmI AGTACT 1 cut(s) 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.