prolyl 4-hydroxylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25600 AT4G25600 AT4G25600 AT4G25600 |
| fragaria_vesca | FvH4_7g29771 FvH4_7g29771 |
| malus_domestica | MD07G1273300.v1.1 |
| prunus_persica | Prupe.2G297000_v2.0.a1 |
| pyrus_communis | pycom07g24990 |
| rosa_chinensis | RchiOBHm_Chr1g0377771 |
| rosa_laevigata | RLG00000026500 |
| rosa_multiflora | Rmu_sc0005758.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00281070 |
| rosa_rugosa | Rorug01G0404900 |
| rosa_samantha | Rh1AG427400 |
| rosa_wichuraiana | Rw1G037110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 160, 774 |
| AciI | CCGC | 1 cut(s) | 160 |
| AclWI | GGATC | 2 cut(s) | 477, 490 |
| AfaI | GTAC | 2 cut(s) | 717, 904 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 160, 448, 638 |
| AgsI | TTSAA | 5 cut(s) | 170, 340, 363, 628, 661 |
| AjnI | CCWGG | 3 cut(s) | 386, 593, 833 |
| AluBI | AGCT | 2 cut(s) | 580, 828 |
| AluI | AGCT | 2 cut(s) | 580, 828 |
| AlwI | GGATC | 2 cut(s) | 477, 490 |
| AoxI | GGCC | 1 cut(s) | 591 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 268 |
| AsuC2I | CCSGG | 1 cut(s) | 569 |
| AsuHPI | GGTGA | 2 cut(s) | 566, 672 |
| BaeGI | GKGCMC | 1 cut(s) | 129 |
| BamHI | GGATCC | 1 cut(s) | 482 |
| BanII | GRGCYC | 1 cut(s) | 507 |
| BauI | CACGAG | 1 cut(s) | 546 |
| BbsI | GAAGAC | 2 cut(s) | 261, 825 |
| BccI | CCATC | 4 cut(s) | 53, 254, 344, 675 |
| BciT130I | CCWGG | 3 cut(s) | 388, 595, 835 |
| BcnI | CCSGG | 1 cut(s) | 569 |
| BfmI | CTRYAG | 1 cut(s) | 273 |
| Bme1390I | CCNGG | 4 cut(s) | 388, 569, 595, 835 |
| BmiI | GGNNCC | 2 cut(s) | 484, 866 |
| BmrFI | CCNGG | 4 cut(s) | 388, 569, 595, 835 |
| BmsI | GCATC | 2 cut(s) | 303, 698 |
| BpiI | GAAGAC | 2 cut(s) | 261, 825 |
| BpuEI | CTTGAG | 1 cut(s) | 464 |
| BpuMI | CCSGG | 1 cut(s) | 569 |
| BsaBI | GATNNNNATC | 1 cut(s) | 211 |
| BsaJI | CCNNGG | 2 cut(s) | 185, 833 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 160, 448, 638 |
| Bse1I | ACTGG | 1 cut(s) | 495 |
| Bse8I | GATNNNNATC | 1 cut(s) | 211 |
| BseBI | CCWGG | 3 cut(s) | 388, 595, 835 |
| BseDI | CCNNGG | 2 cut(s) | 185, 833 |
| BseGI | GGATG | 4 cut(s) | 318, 355, 667, 895 |
| BseJI | GATNNNNATC | 1 cut(s) | 211 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 160, 448, 638 |
| BseNI | ACTGG | 1 cut(s) | 495 |
| BseRI | GAGGAG | 6 cut(s) | 40, 43, 46, 100, 236, 461 |
| BseSI | GKGCMC | 1 cut(s) | 129 |
| Bsh1236I | CGCG | 2 cut(s) | 160, 774 |
| BshFI | GGCC | 1 cut(s) | 593 |
| BsiSI | CCGG | 1 cut(s) | 569 |
| BslFI | GGGAC | 1 cut(s) | 816 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 160, 448, 638 |
| BsmFI | GGGAC | 1 cut(s) | 816 |
| BsmI | GAATGC | 1 cut(s) | 812 |
| BsnI | GGCC | 1 cut(s) | 593 |
| Bsp1286I | GDGCHC | 2 cut(s) | 129, 507 |
| Bsp143I | GATC | 1 cut(s) | 482 |
| Bsp68I | TCGCGA | 1 cut(s) | 774 |
| BspACI | CCGC | 1 cut(s) | 160 |
| BspANI | GGCC | 1 cut(s) | 593 |
| BspFNI | CGCG | 2 cut(s) | 160, 774 |
| BspHI | TCATGA | 1 cut(s) | 876 |
| BspLI | GGNNCC | 2 cut(s) | 484, 866 |
| BspPI | GGATC | 2 cut(s) | 477, 490 |
| BsrI | ACTGG | 1 cut(s) | 495 |
| BssECI | CCNNGG | 2 cut(s) | 185, 833 |
| BssMI | GATC | 1 cut(s) | 482 |
| BssSI | CACGAG | 1 cut(s) | 546 |
| BssT1I | CCWWGG | 1 cut(s) | 185 |
| Bst2BI | CACGAG | 1 cut(s) | 546 |
| Bst2UI | CCWGG | 3 cut(s) | 388, 595, 835 |
| Bst4CI | ACNGT | 3 cut(s) | 520, 620, 902 |
| Bst6I | CTCTTC | 1 cut(s) | 908 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 446 |
| BstF5I | GGATG | 4 cut(s) | 318, 355, 667, 895 |
| BstFNI | CGCG | 2 cut(s) | 160, 774 |
| BstKTI | GATC | 1 cut(s) | 485 |
| BstMBI | GATC | 1 cut(s) | 482 |
| BstNI | CCWGG | 3 cut(s) | 388, 595, 835 |
| BstNSI | RCATGY | 1 cut(s) | 909 |
| BstSCI | CCNGG | 4 cut(s) | 386, 567, 593, 833 |
| BstSFI | CTRYAG | 1 cut(s) | 273 |
| BstSLI | GKGCMC | 1 cut(s) | 129 |
| BstUI | CGCG | 2 cut(s) | 160, 774 |
| BstV2I | GAAGAC | 2 cut(s) | 261, 825 |
| BstX2I | RGATCY | 1 cut(s) | 482 |
| BstYI | RGATCY | 1 cut(s) | 482 |
| BsuRI | GGCC | 1 cut(s) | 593 |
| BtsCI | GGATG | 4 cut(s) | 318, 355, 667, 895 |
| BtsIMutI | CAGTG | 2 cut(s) | 488, 810 |
| BtuMI | TCGCGA | 1 cut(s) | 774 |
| CciI | TCATGA | 1 cut(s) | 876 |
| CseI | GACGC | 1 cut(s) | 666 |
| Csp6I | GTAC | 2 cut(s) | 716, 903 |
| CviAII | CATG | 4 cut(s) | 701, 755, 877, 906 |
| CviQI | GTAC | 2 cut(s) | 716, 903 |
| DpnI | GATC | 1 cut(s) | 484 |
| DpnII | GATC | 1 cut(s) | 482 |
| Eam1104I | CTCTTC | 1 cut(s) | 908 |
| EarI | CTCTTC | 1 cut(s) | 908 |
| Eco130I | CCWWGG | 1 cut(s) | 185 |
| Eco147I | AGGCCT | 1 cut(s) | 593 |
| Eco24I | GRGCYC | 1 cut(s) | 507 |
| Eco32I | GATATC | 1 cut(s) | 381 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 446 |
| EcoRII | CCWGG | 3 cut(s) | 386, 593, 833 |
| EcoRV | GATATC | 1 cut(s) | 381 |
| EcoT14I | CCWWGG | 1 cut(s) | 185 |
| EcoT38I | GRGCYC | 1 cut(s) | 507 |
| ErhI | CCWWGG | 1 cut(s) | 185 |
| FaeI | CATG | 4 cut(s) | 704, 758, 880, 909 |
| FaiI | YATR | 7 cut(s) | 201, 282, 356, 702, 756, 878, 907 |
| FaqI | GGGAC | 1 cut(s) | 816 |
| FatI | CATG | 4 cut(s) | 700, 754, 876, 905 |
| FauI | CCCGC | 1 cut(s) | 153 |
| FokI | GGATG | 4 cut(s) | 325, 362, 654, 902 |
| FriOI | GRGCYC | 1 cut(s) | 507 |
| HaeIII | GGCC | 1 cut(s) | 593 |
| HapII | CCGG | 1 cut(s) | 569 |
| HgaI | GACGC | 1 cut(s) | 666 |
| Hin1II | CATG | 4 cut(s) | 704, 758, 880, 909 |
| HinfI | GANTC | 6 cut(s) | 147, 207, 287, 340, 559, 572 |
| HpaII | CCGG | 1 cut(s) | 569 |
| HphI | GGTGA | 2 cut(s) | 566, 672 |
| Hpy188I | TCNGA | 3 cut(s) | 217, 577, 889 |
| Hpy188III | TCNNGA | 6 cut(s) | 31, 291, 344, 625, 773, 877 |
| Hpy99I | CGWCG | 1 cut(s) | 160 |
| HpyAV | CCTTC | 4 cut(s) | 70, 197, 407, 716 |
| HpyCH4III | ACNGT | 3 cut(s) | 520, 620, 902 |
| HpyCH4V | TGCA | 4 cut(s) | 433, 647, 810, 909 |
| Hsp92II | CATG | 4 cut(s) | 704, 758, 880, 909 |
| Kzo9I | GATC | 1 cut(s) | 482 |
| LweI | GCATC | 2 cut(s) | 303, 698 |
| MaeIII | GTNAC | 3 cut(s) | 227, 678, 797 |
| MalI | GATC | 1 cut(s) | 484 |
| MboI | GATC | 1 cut(s) | 482 |
| MboII | GAAGA | 6 cut(s) | 17, 31, 261, 469, 830, 925 |
| MfeI | CAATTG | 1 cut(s) | 366 |
| MflI | RGATCY | 1 cut(s) | 482 |
| MhlI | GDGCHC | 2 cut(s) | 129, 507 |
| MluCI | AATT | 6 cut(s) | 66, 95, 366, 460, 648, 790 |
| MroXI | GAANNNNTTC | 1 cut(s) | 268 |
| MslI | CAYNNNNRTG | 1 cut(s) | 672 |
| MspI | CCGG | 1 cut(s) | 569 |
| MspR9I | CCNGG | 4 cut(s) | 388, 569, 595, 835 |
| MunI | CAATTG | 1 cut(s) | 366 |
| Mva1269I | GAATGC | 1 cut(s) | 812 |
| MvaI | CCWGG | 3 cut(s) | 388, 595, 835 |
| MvnI | CGCG | 2 cut(s) | 160, 774 |
| NciI | CCSGG | 1 cut(s) | 569 |
| NdeII | GATC | 1 cut(s) | 482 |
| NlaIII | CATG | 4 cut(s) | 704, 758, 880, 909 |
| NlaIV | GGNNCC | 2 cut(s) | 484, 866 |
| NmuCI | GTSAC | 2 cut(s) | 227, 678 |
| NruI | TCGCGA | 1 cut(s) | 774 |
| NspI | RCATGY | 1 cut(s) | 909 |
| PagI | TCATGA | 1 cut(s) | 876 |
| PceI | AGGCCT | 1 cut(s) | 593 |
| PctI | GAATGC | 1 cut(s) | 812 |
| PdmI | GAANNNNTTC | 1 cut(s) | 268 |
| PfeI | GAWTC | 6 cut(s) | 147, 207, 287, 340, 559, 572 |
| PfoI | TCCNGGA | 1 cut(s) | 567 |
| Psp6I | CCWGG | 3 cut(s) | 386, 593, 833 |
| PspGI | CCWGG | 3 cut(s) | 386, 593, 833 |
| PspN4I | GGNNCC | 2 cut(s) | 484, 866 |
| PsuI | RGATCY | 1 cut(s) | 482 |
| RruI | TCGCGA | 1 cut(s) | 774 |
| RsaI | GTAC | 2 cut(s) | 717, 904 |
| RsaNI | GTAC | 2 cut(s) | 716, 903 |
| RseI | CAYNNNNRTG | 1 cut(s) | 672 |
| Sau3AI | GATC | 1 cut(s) | 482 |
| ScrFI | CCNGG | 4 cut(s) | 388, 569, 595, 835 |
| SduI | GDGCHC | 2 cut(s) | 129, 507 |
| SetI | ASST | 7 cut(s) | 237, 429, 444, 453, 582, 830, 839 |
| SfaNI | GCATC | 2 cut(s) | 303, 698 |
| SfcI | CTRYAG | 1 cut(s) | 273 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 672 |
| SmlI | CTYRAG | 1 cut(s) | 443 |
| SmoI | CTYRAG | 1 cut(s) | 443 |
| Sse9I | AATT | 6 cut(s) | 66, 95, 366, 460, 648, 790 |
| SseBI | AGGCCT | 1 cut(s) | 593 |
| SsiI | CCGC | 1 cut(s) | 160 |
| StuI | AGGCCT | 1 cut(s) | 593 |
| StyD4I | CCNGG | 4 cut(s) | 386, 567, 593, 833 |
| StyI | CCWWGG | 1 cut(s) | 185 |
| TaaI | ACNGT | 3 cut(s) | 520, 620, 902 |
| TaqI | TCGA | 3 cut(s) | 32, 150, 720 |
| TasI | AATT | 6 cut(s) | 66, 95, 366, 460, 648, 790 |
| TatI | WGTACW | 1 cut(s) | 715 |
| TfiI | GAWTC | 6 cut(s) | 147, 207, 287, 340, 559, 572 |
| TscAI | CASTG | 2 cut(s) | 495, 817 |
| TseFI | GTSAC | 2 cut(s) | 227, 678 |
| Tsp45I | GTSAC | 2 cut(s) | 227, 678 |
| TspDTI | ATGAA | 5 cut(s) | 216, 300, 743, 831, 865 |
| TspRI | CASTG | 2 cut(s) | 495, 817 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 446 |
| XceI | RCATGY | 1 cut(s) | 909 |
| XmnI | GAANNNNTTC | 1 cut(s) | 268 |