prolyl 4-hydroxylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25600 AT4G25600 AT4G25600 AT4G25600 |
| fragaria_vesca | FvH4_7g29771 FvH4_7g29771 |
| malus_domestica | MD07G1273300.v1.1 |
| prunus_persica | Prupe.2G297000_v2.0.a1 |
| pyrus_communis | pycom07g24990 |
| rosa_chinensis | RchiOBHm_Chr1g0377771 |
| rosa_laevigata | RLG00000026500 |
| rosa_multiflora | Rmu_sc0005758.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00281070 |
| rosa_rugosa | Rorug01G0404900 |
| rosa_samantha | Rh1AG427400 |
| rosa_wichuraiana | Rw1G037110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 415 |
| AccIII | TCCGGA | 1 cut(s) | 664 |
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcsI | RAATTY | 5 cut(s) | 247, 312, 360, 448, 728 |
| AdeI | CACNNNGTG | 1 cut(s) | 236 |
| AfaI | GTAC | 1 cut(s) | 699 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 142, 620, 753 |
| AgsI | TTSAA | 4 cut(s) | 322, 345, 610, 704 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 170 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 352, 384 |
| AluBI | AGCT | 3 cut(s) | 368, 401, 562 |
| AluI | AGCT | 3 cut(s) | 368, 401, 562 |
| Alw26I | GTCTC | 1 cut(s) | 17 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 557 |
| Aor13HI | TCCGGA | 1 cut(s) | 664 |
| AoxI | GGCC | 1 cut(s) | 106 |
| ApeKI | GCWGC | 3 cut(s) | 295, 600, 783 |
| ApoI | RAATTY | 5 cut(s) | 247, 312, 360, 448, 728 |
| BalI | TGGCCA | 1 cut(s) | 108 |
| BanII | GRGCYC | 1 cut(s) | 489 |
| BbsI | GAAGAC | 1 cut(s) | 807 |
| BbvCI | CCTCAGC | 1 cut(s) | 563 |
| BbvI | GCAGC | 3 cut(s) | 282, 612, 795 |
| BccI | CCATC | 2 cut(s) | 22, 38 |
| BcoDI | GTCTC | 1 cut(s) | 17 |
| BisI | GCNGC | 3 cut(s) | 296, 601, 784 |
| BlsI | GCNGC | 3 cut(s) | 297, 602, 785 |
| BmcAI | AGTACT | 1 cut(s) | 699 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 170 |
| BmiI | GGNNCC | 1 cut(s) | 848 |
| BmrI | ACTGGG | 1 cut(s) | 689 |
| BmsI | GCATC | 3 cut(s) | 612, 668, 680 |
| BmuI | ACTGGG | 1 cut(s) | 689 |
| BpiI | GAAGAC | 1 cut(s) | 807 |
| Bpu10I | CCTNAGC | 1 cut(s) | 563 |
| BsaJI | CCNNGG | 1 cut(s) | 167 |
| BsaWI | WCCGGW | 1 cut(s) | 664 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 142, 620, 753 |
| Bse1I | ACTGG | 1 cut(s) | 695 |
| BseAI | TCCGGA | 1 cut(s) | 664 |
| BseDI | CCNNGG | 1 cut(s) | 167 |
| BseGI | GGATG | 2 cut(s) | 337, 767 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 142, 620, 753 |
| BseMII | CTCAG | 4 cut(s) | 126, 426, 549, 554 |
| BseNI | ACTGG | 1 cut(s) | 695 |
| BseRI | GAGGAG | 4 cut(s) | 33, 218, 443, 580 |
| BseXI | GCAGC | 3 cut(s) | 282, 612, 795 |
| Bsh1236I | CGCG | 1 cut(s) | 415 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BsiSI | CCGG | 1 cut(s) | 665 |
| BslFI | GGGAC | 2 cut(s) | 798, 898 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 142, 620, 753 |
| BsmAI | GTCTC | 1 cut(s) | 17 |
| BsmBI | CGTCTC | 1 cut(s) | 17 |
| BsmFI | GGGAC | 2 cut(s) | 798, 898 |
| BsmI | GAATGC | 1 cut(s) | 794 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bsp1286I | GDGCHC | 1 cut(s) | 489 |
| Bsp13I | TCCGGA | 1 cut(s) | 664 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BspCNI | CTCAG | 4 cut(s) | 125, 427, 550, 555 |
| BspEI | TCCGGA | 1 cut(s) | 664 |
| BspFNI | CGCG | 1 cut(s) | 415 |
| BspLI | GGNNCC | 1 cut(s) | 848 |
| BsrI | ACTGG | 1 cut(s) | 695 |
| BssECI | CCNNGG | 1 cut(s) | 167 |
| BssT1I | CCWWGG | 1 cut(s) | 167 |
| Bst4CI | ACNGT | 2 cut(s) | 502, 812 |
| Bst6I | CTCTTC | 2 cut(s) | 237, 890 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 789 |
| BstC8I | GCNNGC | 1 cut(s) | 910 |
| BstDEI | CTNAG | 5 cut(s) | 65, 112, 435, 558, 563 |
| BstF5I | GGATG | 2 cut(s) | 337, 767 |
| BstFNI | CGCG | 1 cut(s) | 415 |
| BstMAI | GTCTC | 1 cut(s) | 17 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 789 |
| BstNSI | RCATGY | 1 cut(s) | 891 |
| BstUI | CGCG | 1 cut(s) | 415 |
| BstV1I | GCAGC | 3 cut(s) | 282, 612, 795 |
| BstV2I | GAAGAC | 1 cut(s) | 807 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| BtsCI | GGATG | 2 cut(s) | 337, 767 |
| Cac8I | GCNNGC | 1 cut(s) | 910 |
| CaiI | CAGNNNCTG | 1 cut(s) | 557 |
| Csp6I | GTAC | 1 cut(s) | 698 |
| CviAII | CATG | 5 cut(s) | 233, 325, 530, 859, 888 |
| CviQI | GTAC | 1 cut(s) | 698 |
| DdeI | CTNAG | 5 cut(s) | 65, 112, 435, 558, 563 |
| DraIII | CACNNNGTG | 1 cut(s) | 236 |
| DriI | GACNNNNNGTC | 1 cut(s) | 170 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| Eam1104I | CTCTTC | 2 cut(s) | 237, 890 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 170 |
| EarI | CTCTTC | 2 cut(s) | 237, 890 |
| Eco130I | CCWWGG | 1 cut(s) | 167 |
| Eco24I | GRGCYC | 1 cut(s) | 489 |
| EcoRI | GAATTC | 1 cut(s) | 247 |
| EcoT14I | CCWWGG | 1 cut(s) | 167 |
| EcoT22I | ATGCAT | 1 cut(s) | 661 |
| EcoT38I | GRGCYC | 1 cut(s) | 489 |
| ErhI | CCWWGG | 1 cut(s) | 167 |
| Esp3I | CGTCTC | 1 cut(s) | 17 |
| FaeI | CATG | 5 cut(s) | 236, 328, 533, 862, 891 |
| FaqI | GGGAC | 2 cut(s) | 798, 898 |
| FatI | CATG | 5 cut(s) | 232, 324, 529, 858, 887 |
| Fnu4HI | GCNGC | 3 cut(s) | 296, 601, 784 |
| FokI | GGATG | 2 cut(s) | 344, 754 |
| FriOI | GRGCYC | 1 cut(s) | 489 |
| Fsp4HI | GCNGC | 3 cut(s) | 296, 601, 784 |
| GluI | GCNGC | 3 cut(s) | 296, 601, 784 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| HapII | CCGG | 1 cut(s) | 665 |
| Hin1II | CATG | 5 cut(s) | 236, 328, 533, 862, 891 |
| HinfI | GANTC | 2 cut(s) | 541, 554 |
| HpaII | CCGG | 1 cut(s) | 665 |
| Hpy188I | TCNGA | 4 cut(s) | 199, 559, 583, 772 |
| Hpy188III | TCNNGA | 3 cut(s) | 607, 665, 778 |
| HpyAV | CCTTC | 4 cut(s) | 52, 147, 389, 698 |
| HpyCH4III | ACNGT | 2 cut(s) | 502, 812 |
| HpyCH4IV | ACGT | 1 cut(s) | 522 |
| HpyCH4V | TGCA | 5 cut(s) | 629, 659, 740, 792, 891 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 789 |
| HpyF3I | CTNAG | 5 cut(s) | 65, 112, 435, 558, 563 |
| HpySE526I | ACGT | 1 cut(s) | 522 |
| Hsp92II | CATG | 5 cut(s) | 236, 328, 533, 862, 891 |
| Kpn2I | TCCGGA | 1 cut(s) | 664 |
| LmnI | GCTCC | 1 cut(s) | 567 |
| Lsp1109I | GCAGC | 3 cut(s) | 282, 612, 795 |
| LweI | GCATC | 3 cut(s) | 612, 668, 680 |
| MaeII | ACGT | 1 cut(s) | 522 |
| MaeIII | GTNAC | 3 cut(s) | 209, 458, 523 |
| MboII | GAAGA | 4 cut(s) | 254, 451, 812, 907 |
| MfeI | CAATTG | 1 cut(s) | 817 |
| MhlI | GDGCHC | 1 cut(s) | 489 |
| MlsI | TGGCCA | 1 cut(s) | 108 |
| MluCI | AATT | 6 cut(s) | 247, 312, 360, 448, 728, 817 |
| MluNI | TGGCCA | 1 cut(s) | 108 |
| MlyI | GAGTC | 1 cut(s) | 563 |
| MmeI | TCCRAC | 1 cut(s) | 175 |
| Mox20I | TGGCCA | 1 cut(s) | 108 |
| Mph1103I | ATGCAT | 1 cut(s) | 661 |
| MroI | TCCGGA | 1 cut(s) | 664 |
| MscI | TGGCCA | 1 cut(s) | 108 |
| Msp20I | TGGCCA | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 665 |
| MunI | CAATTG | 1 cut(s) | 817 |
| Mva1269I | GAATGC | 1 cut(s) | 794 |
| MvnI | CGCG | 1 cut(s) | 415 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 789 |
| NlaIII | CATG | 5 cut(s) | 236, 328, 533, 862, 891 |
| NlaIV | GGNNCC | 1 cut(s) | 848 |
| NmuCI | GTSAC | 2 cut(s) | 209, 523 |
| NsiI | ATGCAT | 1 cut(s) | 661 |
| NspI | RCATGY | 1 cut(s) | 891 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 783 |
| PctI | GAATGC | 1 cut(s) | 794 |
| PfeI | GAWTC | 1 cut(s) | 541 |
| PkrI | GCNGC | 3 cut(s) | 297, 602, 785 |
| PleI | GAGTC | 1 cut(s) | 562 |
| PpsI | GAGTC | 1 cut(s) | 562 |
| PspN4I | GGNNCC | 1 cut(s) | 848 |
| PstNI | CAGNNNCTG | 1 cut(s) | 557 |
| RsaI | GTAC | 1 cut(s) | 699 |
| RsaNI | GTAC | 1 cut(s) | 698 |
| SatI | GCNGC | 3 cut(s) | 296, 601, 784 |
| ScaI | AGTACT | 1 cut(s) | 699 |
| SchI | GAGTC | 1 cut(s) | 563 |
| SduI | GDGCHC | 1 cut(s) | 489 |
| SetI | ASST | 9 cut(s) | 36, 190, 219, 370, 403, 411, 525, 564, 576 |
| SfaNI | GCATC | 3 cut(s) | 612, 668, 680 |
| Sse9I | AATT | 6 cut(s) | 247, 312, 360, 448, 728, 817 |
| StyI | CCWWGG | 1 cut(s) | 167 |
| TaaI | ACNGT | 2 cut(s) | 502, 812 |
| TaiI | ACGT | 1 cut(s) | 525 |
| TaqI | TCGA | 3 cut(s) | 426, 777, 827 |
| TasI | AATT | 6 cut(s) | 247, 312, 360, 448, 728, 817 |
| TatI | WGTACW | 1 cut(s) | 697 |
| TfiI | GAWTC | 1 cut(s) | 541 |
| TseFI | GTSAC | 2 cut(s) | 209, 523 |
| TseI | GCWGC | 3 cut(s) | 295, 600, 783 |
| Tsp45I | GTSAC | 2 cut(s) | 209, 523 |
| TspDTI | ATGAA | 6 cut(s) | 85, 107, 240, 721, 813, 847 |
| TspGWI | ACGGA | 1 cut(s) | 638 |
| XapI | RAATTY | 5 cut(s) | 247, 312, 360, 448, 728 |
| XceI | RCATGY | 1 cut(s) | 891 |
| ZrmI | AGTACT | 1 cut(s) | 699 |
| Zsp2I | ATGCAT | 1 cut(s) | 661 |