FvH4_7g31990

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0009192
Physical Location & Seq
Reverse (-)
23076434 .. 23080195
3762 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31990.t1

Sequence Viewer

Length: 1758 bp
ATGAACGGCAAGTCGCTATTTAAGAGGGTTTTAAGTTTGAACCGACCCACAAAACCCGACCCGCCCAAATTCCCATTATCTCTTTGGCTCCGTCTTCACAGTTCTGCAACTCTCACTCCTCTAATGGCTGCTTCTCTCATTCTACCTTCTCACTTCTTCACCACCTACAAGATAAGCAAACTGTGCTTACATCACATGCAGTCAGCAAATCCACACAAAGGCATCACCTGCTTTTTCCCGGTTAGAGCATTGGCTTCTAGAACTTTTGCTTCAGTTGGGTCAGTAGAGAATCACGTCTCAGCTCCAACCAACACTCAAAGGTCTGGAGGTTCTAAAACATCTGATAATGATTTCGAGAGGGAGTTACAGGAGTTGTTTGATGAAGTGAAAACGTTGGTTATGAATGGGAGTAAAGATGATGCTGTGGATTTGCTTCGAGCGAATTATGAGGCTGTGAAGGAGAGGATGGATGCCGGGGTTAGAGGCATTGAGGAAGCTGCTACCATTGACATCATAGCTCTAGGGTACATGGCTGTTGGTGACTTTAAGTTTGTCGAGTCGTTACTGGAAATGTTGAATGAGATTGTTGGAAGTCTAAAGGATGATGAACCATTGCTGGATTCAGTTCTGGTGCATATGGGAAGCATGTATTCAACTTTGGGGAAGTTTGAGAAATCAATGATTGTATATAGGGGAGCAATTGATAACATGGAGAACATATATGGGAAACATAGTGTTTTTCTTATCACGCCAATTTTGGGCATGGCAAAAGTTCTTGGTTCTATTGGAAGGACTACAAAAGCAGTAGATTTTTACCATCGTGCAATAGCTCTTCTCGAATCTAGCAGAGGTGCTGAATGTGAGGATTTGGCCATACCTTTGTTTGGTCTCGGCAGCCTTTTACTCAAACAAGGGAAACCTACTGAGGCAGAAACTCCTTTTTTAAGAATTTTAAATATATACACAAAGTTGTATGGAGAAGATGATGGAAGAGTTGGGATGGCTATGAGTTCCCTGGCCCATGTCAAGTGTGCAATGGGAAAGGCAAATGAAGCAATCGATTTATATAAGAGCGCTCTTAAAGTCATCAAGGATTCCAATTATATGGCTTCTGATGACAGCATAGTGGAGAAGATGCGGATAGATCTGGCAGAATTACTTCATGCTGTTGGAAGGGGAAAGGAAGGCCGAGAGCTACTGGAGGAATGCTTGCTGATCACTGAGAAACATAAGGGCAAAGAGGACCCCAGCTCAGTGACACACCTCATCAATCTCGCAACTTCACATTCCCGCTCAAAGAACTATGTGGAGGCTGAGCGCTTGCTGAGGACAAGTTTGCAGGTCTTGTCAAAGACAGTGTCACCCGATGACCAATCCATCTCATTCCCAATGTTGCACCTCGCCGTTACTCTCTACCAATTAAAACAGGACGAAGAAGCTGAACAACTCGCCCTCCAGGCTTTGCACATTCGTGAGAAAGCATTCGGAGAAGACTCCCTACCTGTTGCTGAGGCTCTCGATTGTCTGGTGTCAATCCAAACAAGACTGACAAGGGACGACGAAGTGTTACTAGATCAGCTGAAGAGGGTATTGAGCATCCAAGAGAAAGAGTTCGGCCCCGAGAGCAAGGAGGTCTTGACAACCTTAAAAAAAGTTGTACATTTCCTAGACAAACTAGGCAGGAAAAACGACAAGCTCCTCTTGCAGAAACGACTCTCTGCCCTTAGATCAAAATTCAAGCAACAAATTCAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_8

Protein Analysis

586

Amino Acids

65.16

Weight (kDa)

6.8

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_12 PF13424 208 - 280 7e-06 Tetratricopeptide repeat
TPR_MalT PF17874 208 - 490 5.8e-14 MalT-like TPR region
TPR_12 PF13424 291 - 362 3.5e-11 Tetratricopeptide repeat
TPR_12 PF13424 381 - 449 2.7e-09 Tetratricopeptide repeat
TPR_NPHP3 PF24885 440 - 543 6.9e-07 Nephrocystin-3 TPR domain
TPR_10 PF13374 464 - 499 1.1e-07 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 236
Acc36I ACCTGC 2 cut(s) 236, 1330
AccBSI CCGCTC 1 cut(s) 1293
AciI CCGC 3 cut(s) 62, 1138, 1291
AclI AACGTT 1 cut(s) 392
AcoI YGGCCR 1 cut(s) 870
AcsI RAATTY 4 cut(s) 68, 948, 1733, 1746
AcuI CTGAAG 2 cut(s) 255, 1601
AfaI GTAC 2 cut(s) 527, 1659
AfeI AGCGCT 2 cut(s) 1075, 1319
AfiI CCNNNNNNNGG 3 cut(s) 218, 758, 884
AgsI TTSAA 5 cut(s) 40, 577, 654, 1738, 1751
AjiI CACGTC 1 cut(s) 295
AjnI CCWGG 2 cut(s) 1014, 1455
AleI CACNNNNGTG 1 cut(s) 1470
AluBI AGCT 9 cut(s) 302, 497, 518, 830, 1195, 1251, 1439, 1579, 1696
AluI AGCT 9 cut(s) 302, 497, 518, 830, 1195, 1251, 1439, 1579, 1696
Alw26I GTCTC 2 cut(s) 301, 893
Ama87I CYCGRG 1 cut(s) 1619
Aor51HI AGCGCT 2 cut(s) 1075, 1319
AoxI GGCC 4 cut(s) 870, 1017, 1186, 1615
ApeKI GCWGC 3 cut(s) 128, 497, 894
ApoI RAATTY 4 cut(s) 68, 948, 1733, 1746
ArsI GACNNNNNNTTYG 4 cut(s) 533, 565, 1343, 1375
Asp700I GAANNNNTTC 3 cut(s) 1158, 1481, 1610
AspLEI GCGC 2 cut(s) 1076, 1320
AspS9I GGNCC 3 cut(s) 1018, 1243, 1616
AsuC2I CCSGG 2 cut(s) 239, 475
AsuHPI GGTGA 4 cut(s) 151, 217, 551, 1353
AvaI CYCGRG 1 cut(s) 1619
AvaII GGWCC 1 cut(s) 1243
BalI TGGCCA 1 cut(s) 872
BarI GAAGNNNNNNTAC 2 cut(s) 1482, 1514
BbsI GAAGAC 2 cut(s) 86, 1497
BbvCI CCTCAGC 2 cut(s) 1325, 1509
BbvI GCAGC 3 cut(s) 115, 484, 906
BccI CCATC 5 cut(s) 460, 825, 980, 994, 1385
BceAI ACGGC 2 cut(s) 22, 1388
BciT130I CCWGG 2 cut(s) 1016, 1457
BclI TGATCA 1 cut(s) 1215
BcnI CCSGG 2 cut(s) 239, 475
BcoDI GTCTC 2 cut(s) 301, 893
BfaI CTAG 6 cut(s) 258, 521, 843, 1571, 1667, 1676
BfoI RGCGCY 2 cut(s) 1077, 1321
BfuAI ACCTGC 2 cut(s) 236, 1330
BglI GCCNNNNNGGC 1 cut(s) 1457
BglII AGATCT 1 cut(s) 1144
BisI GCNGC 3 cut(s) 129, 498, 895
BlpI GCTNAGC 1 cut(s) 1314
BlsI GCNGC 3 cut(s) 130, 499, 896
Bme1390I CCNGG 4 cut(s) 239, 475, 1016, 1457
Bme18I GGWCC 1 cut(s) 1243
BmeT110I CYCGRG 1 cut(s) 1619
BmgBI CACGTC 1 cut(s) 295
BmgT120I GGNCC 3 cut(s) 1018, 1243, 1616
BmiI GGNNCC 3 cut(s) 89, 1245, 1618
BmrFI CCNGG 4 cut(s) 239, 475, 1016, 1457
BmsI GCATC 5 cut(s) 231, 409, 460, 1125, 1605
BpiI GAAGAC 2 cut(s) 86, 1497
BpmI CTGGAG 3 cut(s) 345, 1220, 1439
Bpu10I CCTNAGC 2 cut(s) 1325, 1509
Bpu1102I GCTNAGC 1 cut(s) 1314
BpuMI CCSGG 2 cut(s) 239, 475
Bsa29I ATCGAT 1 cut(s) 1059
BsaI GGTCTC 1 cut(s) 893
BsaJI CCNNGG 2 cut(s) 474, 1014
BsaXI ACNNNNNCTCC 4 cut(s) 100, 130, 1437, 1467
Bsc4I CCNNNNNNNGG 3 cut(s) 218, 758, 884
Bse1I ACTGG 2 cut(s) 570, 1203
Bse3DI GCAATG 2 cut(s) 611, 1041
BseBI CCWGG 2 cut(s) 1016, 1457
BseCI ATCGAT 1 cut(s) 1059
BseDI CCNNGG 2 cut(s) 474, 1014
BseGI GGATG 5 cut(s) 471, 475, 607, 1005, 1596
BseLI CCNNNNNNNGG 3 cut(s) 218, 758, 884
BseMI GCAATG 2 cut(s) 611, 1041
BseMII CTCAG 7 cut(s) 312, 915, 1212, 1266, 1305, 1316, 1500
BseNI ACTGG 2 cut(s) 570, 1203
BseRI GAGGAG 2 cut(s) 108, 1688
BseXI GCAGC 3 cut(s) 115, 484, 906
BseYI CCCAGC 1 cut(s) 1247
BshFI GGCC 4 cut(s) 872, 1019, 1188, 1617
BshVI ATCGAT 1 cut(s) 1059
BsiHKCI CYCGRG 1 cut(s) 1619
BsiSI CCGG 2 cut(s) 239, 474
BslFI GGGAC 1 cut(s) 1568
BslI CCNNNNNNNGG 3 cut(s) 218, 758, 884
BsmAI GTCTC 2 cut(s) 301, 893
BsmBI CGTCTC 1 cut(s) 301
BsmFI GGGAC 1 cut(s) 1568
BsmI GAATGC 2 cut(s) 1211, 1481
BsnI GGCC 4 cut(s) 872, 1019, 1188, 1617
Bso31I GGTCTC 1 cut(s) 893
BsoBI CYCGRG 1 cut(s) 1619
Bsp1407I TGTACA 1 cut(s) 1657
Bsp143I GATC 4 cut(s) 1144, 1215, 1573, 1727
Bsp1720I GCTNAGC 1 cut(s) 1314
BspACI CCGC 3 cut(s) 62, 1138, 1291
BspANI GGCC 4 cut(s) 872, 1019, 1188, 1617
BspCNI CTCAG 7 cut(s) 311, 916, 1213, 1265, 1306, 1317, 1501
BspDI ATCGAT 1 cut(s) 1059
BspLI GGNNCC 3 cut(s) 89, 1245, 1618
BspMI ACCTGC 2 cut(s) 236, 1330
BspQI GCTCTTC 1 cut(s) 837
BspTNI GGTCTC 1 cut(s) 893
BsrBI CCGCTC 1 cut(s) 1293
BsrDI GCAATG 2 cut(s) 611, 1041
BsrGI TGTACA 1 cut(s) 1657
BsrI ACTGG 2 cut(s) 570, 1203
BssECI CCNNGG 2 cut(s) 474, 1014
BssMI GATC 4 cut(s) 1144, 1215, 1573, 1727
Bst2UI CCWGG 2 cut(s) 1016, 1457
Bst4CI ACNGT 4 cut(s) 101, 183, 1357, 1755
Bst6I CTCTTC 3 cut(s) 837, 985, 1577
BstAPI GCANNNNNTGC 2 cut(s) 183, 228
BstAUI TGTACA 1 cut(s) 1657
BstC8I GCNNGC 2 cut(s) 1211, 1322
BstDEI CTNAG 8 cut(s) 298, 924, 1221, 1252, 1314, 1325, 1509, 1724
BstF5I GGATG 5 cut(s) 471, 475, 607, 1005, 1596
BstH2I RGCGCY 2 cut(s) 1077, 1321
BstHHI GCGC 2 cut(s) 1076, 1320
BstKTI GATC 4 cut(s) 1147, 1218, 1576, 1730
BstMAI GTCTC 2 cut(s) 301, 893
BstMBI GATC 4 cut(s) 1144, 1215, 1573, 1727
BstMWI GCNNNNNNNGC 6 cut(s) 183, 228, 1052, 1457, 1623, 1702
BstNI CCWGG 2 cut(s) 1016, 1457
BstNSI RCATGY 2 cut(s) 199, 649
BstSCI CCNGG 4 cut(s) 237, 473, 1014, 1455
BstV1I GCAGC 3 cut(s) 115, 484, 906
BstV2I GAAGAC 2 cut(s) 86, 1497
BstX2I RGATCY 1 cut(s) 1144
BstXI CCANNNNNNTGG 1 cut(s) 1105
BstYI RGATCY 1 cut(s) 1144
Bsu15I ATCGAT 1 cut(s) 1059
BsuRI GGCC 4 cut(s) 872, 1019, 1188, 1617
BsuTUI ATCGAT 1 cut(s) 1059
BtrI CACGTC 1 cut(s) 295
BtsCI GGATG 5 cut(s) 471, 475, 607, 1005, 1596
BtsIMutI CAGTG 3 cut(s) 1218, 1260, 1362
BveI ACCTGC 2 cut(s) 236, 1330
Cac8I GCNNGC 2 cut(s) 1211, 1322
CfoI GCGC 2 cut(s) 1076, 1320
Cfr13I GGNCC 3 cut(s) 1018, 1243, 1616
ClaI ATCGAT 1 cut(s) 1059
Csp6I GTAC 2 cut(s) 526, 1658
CviAII CATG 7 cut(s) 196, 529, 646, 709, 763, 1022, 1163
CviQI GTAC 2 cut(s) 526, 1658
DdeI CTNAG 8 cut(s) 298, 924, 1221, 1252, 1314, 1325, 1509, 1724
DpnI GATC 4 cut(s) 1146, 1217, 1575, 1729
DpnII GATC 4 cut(s) 1144, 1215, 1573, 1727
DraI TTTAAA 1 cut(s) 954
EaeI YGGCCR 1 cut(s) 870
Eam1104I CTCTTC 3 cut(s) 837, 985, 1577
EarI CTCTTC 3 cut(s) 837, 985, 1577
Eco31I GGTCTC 1 cut(s) 893
Eco47I GGWCC 1 cut(s) 1243
Eco47III AGCGCT 2 cut(s) 1075, 1319
Eco57I CTGAAG 2 cut(s) 255, 1601
Eco88I CYCGRG 1 cut(s) 1619
EcoO109I RGGNCCY 1 cut(s) 1243
EcoRII CCWGG 2 cut(s) 1014, 1455
Esp3I CGTCTC 1 cut(s) 301
FaeI CATG 7 cut(s) 199, 532, 649, 712, 766, 1025, 1166
FalI AAGNNNNNCTT 4 cut(s) 1619, 1651, 1685, 1717
FaqI GGGAC 1 cut(s) 1568
FatI CATG 7 cut(s) 195, 528, 645, 708, 762, 1021, 1162
FauI CCCGC 2 cut(s) 69, 1298
FauNDI CATATG 1 cut(s) 636
FbaI TGATCA 1 cut(s) 1215
Fnu4HI GCNGC 3 cut(s) 129, 498, 895
FokI GGATG 5 cut(s) 478, 482, 614, 1012, 1583
Fsp4HI GCNGC 3 cut(s) 129, 498, 895
FspBI CTAG 6 cut(s) 258, 521, 843, 1571, 1667, 1676
GlaI GCGC 2 cut(s) 1075, 1319
GluI GCNGC 3 cut(s) 129, 498, 895
GsaI CCCAGC 1 cut(s) 1251
GsuI CTGGAG 3 cut(s) 345, 1220, 1439
HaeII RGCGCY 2 cut(s) 1077, 1321
HaeIII GGCC 4 cut(s) 872, 1019, 1188, 1617
HapII CCGG 2 cut(s) 239, 474
HhaI GCGC 2 cut(s) 1076, 1320
Hin1II CATG 7 cut(s) 199, 532, 649, 712, 766, 1025, 1166
Hin6I GCGC 2 cut(s) 1074, 1318
HinP1I GCGC 2 cut(s) 1074, 1318
HinfI GANTC 7 cut(s) 289, 557, 620, 839, 1094, 1493, 1713
HpaII CCGG 2 cut(s) 239, 474
HphI GGTGA 4 cut(s) 151, 217, 551, 1353
Hpy188I TCNGA 3 cut(s) 343, 1114, 1487
Hpy188III TCNNGA 7 cut(s) 258, 324, 355, 836, 1472, 1517, 1636
Hpy99I CGWCG 1 cut(s) 1562
HpyAV CCTTC 5 cut(s) 156, 451, 783, 1167, 1178
HpyCH4III ACNGT 4 cut(s) 101, 183, 1357, 1755
HpyCH4IV ACGT 2 cut(s) 294, 392
HpyCH4V TGCA 9 cut(s) 107, 199, 634, 824, 1034, 1339, 1396, 1465, 1705
HpyF10VI GCNNNNNNNGC 6 cut(s) 183, 228, 1052, 1457, 1623, 1702
HpyF3I CTNAG 8 cut(s) 298, 924, 1221, 1252, 1314, 1325, 1509, 1724
HpySE526I ACGT 2 cut(s) 294, 392
Hsp92II CATG 7 cut(s) 199, 532, 649, 712, 766, 1025, 1166
HspAI GCGC 2 cut(s) 1074, 1318
Ksp22I TGATCA 1 cut(s) 1215
Kzo9I GATC 4 cut(s) 1144, 1215, 1573, 1727
LguI GCTCTTC 1 cut(s) 837
LmnI GCTCC 4 cut(s) 93, 307, 695, 1701
Lsp1109I GCAGC 3 cut(s) 115, 484, 906
LweI GCATC 5 cut(s) 231, 409, 460, 1125, 1605
MaeI CTAG 6 cut(s) 258, 521, 843, 1571, 1667, 1676
MaeII ACGT 2 cut(s) 294, 392
MaeIII GTNAC 7 cut(s) 363, 539, 561, 1255, 1359, 1405, 1566
MalI GATC 4 cut(s) 1146, 1217, 1575, 1729
MbiI CCGCTC 1 cut(s) 1293
MboI GATC 4 cut(s) 1144, 1215, 1573, 1727
MboII GAAGA 9 cut(s) 86, 148, 824, 992, 1002, 1144, 1445, 1502, 1594
MfeI CAATTG 1 cut(s) 699
MflI RGATCY 1 cut(s) 1144
MlsI TGGCCA 1 cut(s) 872
MluNI TGGCCA 1 cut(s) 872
MlyI GAGTC 3 cut(s) 566, 1487, 1707
MmeI TCCRAC 3 cut(s) 329, 568, 1150
Mox20I TGGCCA 1 cut(s) 872
MroXI GAANNNNTTC 3 cut(s) 1158, 1481, 1610
MscI TGGCCA 1 cut(s) 872
MseI TTAA 8 cut(s) 21, 32, 546, 944, 953, 1080, 1421, 1646
MslI CAYNNNNRTG 1 cut(s) 1470
Msp20I TGGCCA 1 cut(s) 872
MspA1I CMGCKG 1 cut(s) 1579
MspI CCGG 2 cut(s) 239, 474
MspR9I CCNGG 4 cut(s) 239, 475, 1016, 1457
MunI CAATTG 1 cut(s) 699
Mva1269I GAATGC 2 cut(s) 1211, 1481
MvaI CCWGG 2 cut(s) 1016, 1457
MwoI GCNNNNNNNGC 6 cut(s) 183, 228, 1052, 1457, 1623, 1702
NciI CCSGG 2 cut(s) 239, 475
NdeI CATATG 1 cut(s) 636
NdeII GATC 4 cut(s) 1144, 1215, 1573, 1727
NlaIII CATG 7 cut(s) 199, 532, 649, 712, 766, 1025, 1166
NlaIV GGNNCC 3 cut(s) 89, 1245, 1618
NmeAIII GCCGAG 2 cut(s) 870, 1214
NmuCI GTSAC 3 cut(s) 539, 1255, 1359
NspI RCATGY 2 cut(s) 199, 649
OliI CACNNNNGTG 1 cut(s) 1470
PaqCI CACCTGC 1 cut(s) 236
PciSI GCTCTTC 1 cut(s) 837
PctI GAATGC 2 cut(s) 1211, 1481
PdmI GAANNNNTTC 3 cut(s) 1158, 1481, 1610
PfeI GAWTC 4 cut(s) 289, 620, 839, 1094
PflFI GACNNNGTC 1 cut(s) 1357
PkrI GCNGC 3 cut(s) 130, 499, 896
PleI GAGTC 3 cut(s) 565, 1487, 1707
PpsI GAGTC 3 cut(s) 565, 1487, 1707
PpuMI RGGWCCY 1 cut(s) 1243
Psp1406I AACGTT 1 cut(s) 392
Psp5II RGGWCCY 1 cut(s) 1243
Psp6I CCWGG 2 cut(s) 1014, 1455
PspFI CCCAGC 1 cut(s) 1247
PspGI CCWGG 2 cut(s) 1014, 1455
PspN4I GGNNCC 3 cut(s) 89, 1245, 1618
PspPI GGNCC 3 cut(s) 1018, 1243, 1616
PspPPI RGGWCCY 1 cut(s) 1243
PsuI RGATCY 1 cut(s) 1144
PsyI GACNNNGTC 1 cut(s) 1357
PvuII CAGCTG 1 cut(s) 1579
RsaI GTAC 2 cut(s) 527, 1659
RsaNI GTAC 2 cut(s) 526, 1658
RseI CAYNNNNRTG 1 cut(s) 1470
SapI GCTCTTC 1 cut(s) 837
SaqAI TTAA 8 cut(s) 21, 32, 546, 944, 953, 1080, 1421, 1646
SatI GCNGC 3 cut(s) 129, 498, 895
Sau3AI GATC 4 cut(s) 1144, 1215, 1573, 1727
Sau96I GGNCC 3 cut(s) 1018, 1243, 1616
SchI GAGTC 3 cut(s) 566, 1487, 1707
ScrFI CCNGG 4 cut(s) 239, 475, 1016, 1457
SfaNI GCATC 5 cut(s) 231, 409, 460, 1125, 1605
SinI GGWCC 1 cut(s) 1243
SmiMI CAYNNNNRTG 1 cut(s) 1470
SsiI CCGC 3 cut(s) 62, 1138, 1291
SspMI CTAG 6 cut(s) 258, 521, 843, 1571, 1667, 1676
StyD4I CCNGG 4 cut(s) 237, 473, 1014, 1455
TaaI ACNGT 4 cut(s) 101, 183, 1357, 1755
TaiI ACGT 2 cut(s) 297, 395
TaqI TCGA 6 cut(s) 354, 436, 555, 837, 1059, 1518
TatI WGTACW 1 cut(s) 1657
TfiI GAWTC 4 cut(s) 289, 620, 839, 1094
Tru1I TTAA 8 cut(s) 21, 32, 546, 944, 953, 1080, 1421, 1646
Tru9I TTAA 8 cut(s) 21, 32, 546, 944, 953, 1080, 1421, 1646
TscAI CASTG 3 cut(s) 1225, 1260, 1362
TseFI GTSAC 3 cut(s) 539, 1255, 1359
TseI GCWGC 3 cut(s) 128, 497, 894
Tsp45I GTSAC 3 cut(s) 539, 1255, 1359
TspDTI ATGAA 6 cut(s) 17, 396, 416, 621, 1065, 1151
TspGWI ACGGA 1 cut(s) 80
TspRI CASTG 3 cut(s) 1225, 1260, 1362
Tth111I GACNNNGTC 1 cut(s) 1357
VpaK11BI GGWCC 1 cut(s) 1243
XapI RAATTY 4 cut(s) 68, 948, 1733, 1746
XbaI TCTAGA 1 cut(s) 257
XceI RCATGY 2 cut(s) 199, 649
XcmI CCANNNNNNNNNTGG 1 cut(s) 81
XmnI GAANNNNTTC 3 cut(s) 1158, 1481, 1610
XspI CTAG 6 cut(s) 258, 521, 843, 1571, 1667, 1676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.