RLG00000026227

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0009192
Physical Location & Seq
Forward (+)
1387818 .. 1392491
4674 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026227

Sequence Viewer

Length: 1746 bp
ATGGCAGCTTCTCTTCTTCTCCCTTCTCACTTCTTCAACACCTACAGGATAAGCAAACTGTGCTTACATCACATTCAGTCAGCAAACTCACACAAAGGCATCACTTGCTTTTTCCCTGTTAGAGCAGTGGCCTCAAGGTCTTTTGCTTCTGTTGGGTCAGTAGAAAATCATGTCTCAGCTCCAAACAAAACTCACAGGTCTGAAGGTTCTAAAACATCCGATGGGACGGATAATGATTTCGAGAGACAGTTACAGGAGTTGTTTGATGAAGTGAAAATGTTGGTTATGAATGGGAATAAAGAGGATGCAGTGGACTTACTTCAAGCGAATTATGAGGCTGTGAAGGAGAGGATGGATGCTGGTGTTAGAGGCATTGAGGAAGCTGCTACCATTGACATTGTAGCTCTAGGGTACATGGCTATTGGCGACTTTAAGTTTGTCGAGTCATTACTGGATGTGTTGAATGAGATTGTTGGCAGTCTAAAGGATGATGAACCACTTCTGGATTCAGTTCTAGTGCATATGGGAAGCATGTATTCAACTTTGGGGAAGTTTGAAAAATCGATGCTTGTATATAGGAGGGCAATTGATAACATGGAGAACATATATGGGAAAAATAGTGTTTTTCTTATCACACCAATTTTGGGCATGGCGAAAGTTCTCAGTTCTATTGGAAGGACTACAAAAGCAGTAGAGTTCTACCATCGTGCAATAACTCTTCTCGAATCTAGCAGAGGTGCTGAAAGTGAGGATTTGGCCATACCTTTGTTTGGTCTTGGCAGCCTTTTACTCAAACAAGGGAAACCTATTGAGGCAGAAACTCCTTTTCTAAGAATTTTAAATATATACACAAAGTTGTATGGAGAAGACGACGGAAGAGTTGGAATGGCTATGAGTTCCCTGGCCCATGTGAAGTGTGCAATGGGAAAGGCAAATGAAGCAATCGATTTATATAAAAAGGCTCTTAAAGTCATCAAGGATTCCAATTATATGGCTTCAGATGACAGCATAGTGGAGAAGATGCGGATAGATTTGGCAGAATTACTTCATGCTGTTGGAAGGGGAAAGGAAGGCCGAGAGCTACTGGAGGAATGCTTGCTGATCACTGAGAAACATAAAGGCAAAGAGGACCCCAGCTCAGTGACACACCTTATCAATCTCGCAACTTCACATTCGCGCTCAAAGAACTATGTGGAGGCTGAGCGGTTGCTGAGGACGAGTTTGCAGGTCTTGGCAAAGACAGTGGCGCCCGATGACCAATCCATCTCGTTCCCAATGCTGCACCTCGCCGTTACTCTCTACCAATTAAAACGGGATGAAGAAGCTGAACAACTTGCCCTCCAGGCTTTGCACATTCGTGAAAAAGCATTCGGAAAGGACTCCCTTCCCGTTGCGGAGGCTCTCGACTGTCTGGTCTCAATCCAAACTAGATTGACAAGGGACGACGAAGCGTTACTAGATCAGCTGGAGAGGGTTTTACGCATCCAAGAGAGAGAGTTCGGCCCCGAGAGCAAGGAGTACACAGAGCACAGAAGTAGTGTCGTACAGTTGAGCCTTTTGCGGTTTTGCCAAAAGCAAAACGGTGAAGTAGGAGCCAAGAAAGGAGGGTTTTCGTCTGTGTCTGTATCTCTGTCTTTAGATCTCGGAAAACGTATGCAAAATCCAGAAGACAGAACCCATCTTTTTTTTTCAAAGATAGATAAGAGTAATGGCAGCAGCCGAAGCACGGACCGGATGGCAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_8

Protein Analysis

582

Amino Acids

64.58

Weight (kDa)

6.07

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_NPHP3 PF24885 159 - 219 5.8e-06 Nephrocystin-3 TPR domain
TPR_12 PF13424 170 - 242 3.3e-06 Tetratricopeptide repeat
TPR_MalT PF17874 171 - 452 1.1e-14 MalT-like TPR region
TPR_12 PF13424 215 - 285 1.2e-09 Tetratricopeptide repeat
TPR_12 PF13424 253 - 324 2.7e-11 Tetratricopeptide repeat
TPR_12 PF13424 343 - 411 2.9e-09 Tetratricopeptide repeat
TPR_NPHP3 PF24885 401 - 499 3.9e-06 Nephrocystin-3 TPR domain
TPR_10 PF13374 426 - 461 1.1e-07 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1412
Acc36I ACCTGC 1 cut(s) 1216
AccB1I GGYRCC 1 cut(s) 1246
AccBSI CCGCTC 1 cut(s) 1204
AccII CGCG 1 cut(s) 1177
AciI CCGC 4 cut(s) 1024, 1204, 1394, 1561
AcoI YGGCCR 1 cut(s) 756
AcsI RAATTY 1 cut(s) 834
AcuI CTGAAG 2 cut(s) 222, 981
AcyI GRCGYC 1 cut(s) 1247
AfaI GTAC 3 cut(s) 413, 1520, 1545
AfiI CCNNNNNNNGG 3 cut(s) 644, 770, 1726
AgsI TTSAA 6 cut(s) 37, 323, 463, 540, 557, 1692
AjnI CCWGG 2 cut(s) 900, 1341
AleI CACNNNNGTG 1 cut(s) 1356
AluBI AGCT 8 cut(s) 8, 179, 383, 404, 1081, 1137, 1325, 1465
AluI AGCT 8 cut(s) 8, 179, 383, 404, 1081, 1137, 1325, 1465
Alw21I GWGCWC 1 cut(s) 1530
Alw26I GTCTC 3 cut(s) 178, 238, 1420
Ama87I CYCGRG 1 cut(s) 1505
AoxI GGCC 5 cut(s) 129, 756, 903, 1072, 1501
ApeKI GCWGC 7 cut(s) 5, 383, 780, 1279, 1713, 1716, 1739
ApoI RAATTY 1 cut(s) 834
ArsI GACNNNNNNTTYG 2 cut(s) 419, 451
Asp700I GAANNNNTTC 2 cut(s) 498, 1044
AspLEI GCGC 2 cut(s) 1179, 1249
AspS9I GGNCC 4 cut(s) 904, 1129, 1502, 1729
AsuHPI GGTGA 1 cut(s) 1595
AvaI CYCGRG 1 cut(s) 1505
AvaII GGWCC 2 cut(s) 1129, 1729
BalI TGGCCA 1 cut(s) 758
BanI GGYRCC 1 cut(s) 1246
BbsI GAAGAC 2 cut(s) 873, 1674
Bbv12I GWGCWC 1 cut(s) 1530
BbvCI CCTCAGC 1 cut(s) 1211
BbvI GCAGC 6 cut(s) 17, 370, 792, 1266, 1725, 1728
BccI CCATC 6 cut(s) 215, 346, 711, 1271, 1686, 1729
BceAI ACGGC 1 cut(s) 1274
BciT130I CCWGG 2 cut(s) 902, 1343
BclI TGATCA 1 cut(s) 1101
BcoDI GTCTC 3 cut(s) 178, 238, 1420
BfaI CTAG 5 cut(s) 407, 515, 729, 1428, 1457
BfmI CTRYAG 1 cut(s) 43
BfoI RGCGCY 1 cut(s) 1250
BfuAI ACCTGC 1 cut(s) 1216
BglI GCCNNNNNGGC 1 cut(s) 1343
BglII AGATCT 1 cut(s) 1639
BisI GCNGC 7 cut(s) 6, 384, 781, 1280, 1714, 1717, 1740
BlpI GCTNAGC 1 cut(s) 1200
BlsI GCNGC 7 cut(s) 7, 385, 782, 1281, 1715, 1718, 1741
Bme1390I CCNGG 2 cut(s) 902, 1343
Bme18I GGWCC 2 cut(s) 1129, 1729
BmeT110I CYCGRG 1 cut(s) 1505
BmgT120I GGNCC 4 cut(s) 904, 1129, 1502, 1729
BmiI GGNNCC 4 cut(s) 1131, 1248, 1504, 1594
BmrFI CCNGG 2 cut(s) 902, 1343
BmsI GCATC 6 cut(s) 108, 295, 346, 555, 1011, 1491
BpiI GAAGAC 2 cut(s) 873, 1674
BpmI CTGGAG 3 cut(s) 1106, 1325, 1487
Bpu10I CCTNAGC 1 cut(s) 1211
Bpu1102I GCTNAGC 1 cut(s) 1200
BpuEI CTTGAG 1 cut(s) 118
Bsa29I ATCGAT 2 cut(s) 563, 945
BsaHI GRCGYC 1 cut(s) 1247
BsaI GGTCTC 1 cut(s) 1420
BsaJI CCNNGG 1 cut(s) 900
BsaWI WCCGGW 1 cut(s) 1731
BsaXI ACNNNNNCTCC 2 cut(s) 1323, 1353
Bsc4I CCNNNNNNNGG 3 cut(s) 644, 770, 1726
Bse1I ACTGG 2 cut(s) 456, 1089
Bse3DI GCAATG 1 cut(s) 927
BseBI CCWGG 2 cut(s) 902, 1343
BseCI ATCGAT 2 cut(s) 563, 945
BseDI CCNNGG 1 cut(s) 900
BseGI GGATG 9 cut(s) 215, 310, 357, 361, 460, 493, 1321, 1482, 1740
BseLI CCNNNNNNNGG 3 cut(s) 644, 770, 1726
BseMI GCAATG 1 cut(s) 927
BseMII CTCAG 6 cut(s) 189, 676, 1098, 1152, 1191, 1202
BseNI ACTGG 2 cut(s) 456, 1089
BseXI GCAGC 6 cut(s) 17, 370, 792, 1266, 1725, 1728
BseYI CCCAGC 1 cut(s) 1133
BsgI GTGCAG 1 cut(s) 1265
Bsh1236I CGCG 1 cut(s) 1177
BshFI GGCC 5 cut(s) 131, 758, 905, 1074, 1503
BshNI GGYRCC 1 cut(s) 1246
BshVI ATCGAT 2 cut(s) 563, 945
BsiHKAI GWGCWC 1 cut(s) 1530
BsiHKCI CYCGRG 1 cut(s) 1505
BsiSI CCGG 1 cut(s) 1732
BslFI GGGAC 2 cut(s) 238, 1454
BslI CCNNNNNNNGG 3 cut(s) 644, 770, 1726
BsmAI GTCTC 3 cut(s) 178, 238, 1420
BsmFI GGGAC 2 cut(s) 238, 1454
BsmI GAATGC 2 cut(s) 1097, 1367
BsnI GGCC 5 cut(s) 131, 758, 905, 1074, 1503
Bso31I GGTCTC 1 cut(s) 1420
BsoBI CYCGRG 1 cut(s) 1505
Bsp1286I GDGCHC 1 cut(s) 1530
Bsp143I GATC 3 cut(s) 1101, 1459, 1639
Bsp1720I GCTNAGC 1 cut(s) 1200
BspACI CCGC 4 cut(s) 1024, 1204, 1394, 1561
BspANI GGCC 5 cut(s) 131, 758, 905, 1074, 1503
BspCNI CTCAG 6 cut(s) 188, 675, 1099, 1151, 1192, 1203
BspDI ATCGAT 2 cut(s) 563, 945
BspFNI CGCG 1 cut(s) 1177
BspLI GGNNCC 4 cut(s) 1131, 1248, 1504, 1594
BspMI ACCTGC 1 cut(s) 1216
BspT107I GGYRCC 1 cut(s) 1246
BspTNI GGTCTC 1 cut(s) 1420
BsrBI CCGCTC 1 cut(s) 1204
BsrDI GCAATG 1 cut(s) 927
BsrI ACTGG 2 cut(s) 456, 1089
BssECI CCNNGG 1 cut(s) 900
BssMI GATC 3 cut(s) 1101, 1459, 1639
BssNI GRCGYC 1 cut(s) 1247
Bst2UI CCWGG 2 cut(s) 902, 1343
Bst4CI ACNGT 6 cut(s) 60, 249, 1243, 1409, 1548, 1583
Bst6I CTCTTC 3 cut(s) 18, 723, 871
BstACI GRCGYC 1 cut(s) 1247
BstAPI GCANNNNNTGC 2 cut(s) 60, 105
BstC8I GCNNGC 1 cut(s) 1097
BstDEI CTNAG 7 cut(s) 175, 662, 830, 1107, 1138, 1200, 1211
BstF5I GGATG 9 cut(s) 215, 310, 357, 361, 460, 493, 1321, 1482, 1740
BstFNI CGCG 1 cut(s) 1177
BstH2I RGCGCY 1 cut(s) 1250
BstHHI GCGC 2 cut(s) 1179, 1249
BstKTI GATC 3 cut(s) 1104, 1462, 1642
BstMAI GTCTC 3 cut(s) 178, 238, 1420
BstMBI GATC 3 cut(s) 1101, 1459, 1639
BstMWI GCNNNNNNNGC 6 cut(s) 60, 105, 938, 1343, 1509, 1722
BstNI CCWGG 2 cut(s) 902, 1343
BstNSI RCATGY 1 cut(s) 535
BstSCI CCNGG 2 cut(s) 900, 1341
BstSFI CTRYAG 1 cut(s) 43
BstUI CGCG 1 cut(s) 1177
BstV1I GCAGC 6 cut(s) 17, 370, 792, 1266, 1725, 1728
BstV2I GAAGAC 2 cut(s) 873, 1674
BstX2I RGATCY 1 cut(s) 1639
BstXI CCANNNNNNTGG 1 cut(s) 991
BstYI RGATCY 1 cut(s) 1639
Bsu15I ATCGAT 2 cut(s) 563, 945
BsuRI GGCC 5 cut(s) 131, 758, 905, 1074, 1503
BsuTUI ATCGAT 2 cut(s) 563, 945
BtsCI GGATG 9 cut(s) 215, 310, 357, 361, 460, 493, 1321, 1482, 1740
BtsI GCAGTG 2 cut(s) 132, 315
BtsIMutI CAGTG 5 cut(s) 132, 315, 1104, 1146, 1248
BveI ACCTGC 1 cut(s) 1216
Cac8I GCNNGC 1 cut(s) 1097
CfoI GCGC 2 cut(s) 1179, 1249
Cfr13I GGNCC 4 cut(s) 904, 1129, 1502, 1729
ClaI ATCGAT 2 cut(s) 563, 945
CpoI CGGWCCG 1 cut(s) 1729
Csp6I GTAC 3 cut(s) 412, 1519, 1544
CspCI CAANNNNNGTGG 2 cut(s) 1224, 1259
CspI CGGWCCG 1 cut(s) 1729
CviAII CATG 7 cut(s) 170, 415, 532, 595, 649, 908, 1049
CviQI GTAC 3 cut(s) 412, 1519, 1544
DdeI CTNAG 7 cut(s) 175, 662, 830, 1107, 1138, 1200, 1211
DinI GGCGCC 1 cut(s) 1248
DpnI GATC 3 cut(s) 1103, 1461, 1641
DpnII GATC 3 cut(s) 1101, 1459, 1639
DraI TTTAAA 1 cut(s) 840
DrdI GACNNNNNNGTC 1 cut(s) 1412
DseDI GACNNNNNNGTC 1 cut(s) 1412
EaeI YGGCCR 1 cut(s) 756
Eam1104I CTCTTC 3 cut(s) 18, 723, 871
EarI CTCTTC 3 cut(s) 18, 723, 871
Eco31I GGTCTC 1 cut(s) 1420
Eco47I GGWCC 2 cut(s) 1129, 1729
Eco57I CTGAAG 2 cut(s) 222, 981
Eco88I CYCGRG 1 cut(s) 1505
EcoO109I RGGNCCY 1 cut(s) 1129
EcoRII CCWGG 2 cut(s) 900, 1341
EgeI GGCGCC 1 cut(s) 1248
EheI GGCGCC 1 cut(s) 1248
FaeI CATG 7 cut(s) 173, 418, 535, 598, 652, 911, 1052
FaqI GGGAC 2 cut(s) 238, 1454
FatI CATG 7 cut(s) 169, 414, 531, 594, 648, 907, 1048
FauNDI CATATG 1 cut(s) 522
FbaI TGATCA 1 cut(s) 1101
Fnu4HI GCNGC 7 cut(s) 6, 384, 781, 1280, 1714, 1717, 1740
FokI GGATG 8 cut(s) 202, 317, 364, 368, 467, 500, 1328, 1469
Fsp4HI GCNGC 7 cut(s) 6, 384, 781, 1280, 1714, 1717, 1740
FspBI CTAG 5 cut(s) 407, 515, 729, 1428, 1457
GlaI GCGC 2 cut(s) 1178, 1248
GluI GCNGC 7 cut(s) 6, 384, 781, 1280, 1714, 1717, 1740
GsaI CCCAGC 1 cut(s) 1137
GsuI CTGGAG 3 cut(s) 1106, 1325, 1487
HaeII RGCGCY 1 cut(s) 1250
HaeIII GGCC 5 cut(s) 131, 758, 905, 1074, 1503
HapII CCGG 1 cut(s) 1732
HhaI GCGC 2 cut(s) 1179, 1249
Hin1I GRCGYC 1 cut(s) 1247
Hin1II CATG 7 cut(s) 173, 418, 535, 598, 652, 911, 1052
Hin6I GCGC 2 cut(s) 1177, 1247
HinP1I GCGC 2 cut(s) 1177, 1247
HinfI GANTC 5 cut(s) 443, 506, 725, 980, 1379
HpaII CCGG 1 cut(s) 1732
HphI GGTGA 1 cut(s) 1595
Hpy166II GTNNAC 2 cut(s) 313, 1521
Hpy188I TCNGA 5 cut(s) 202, 220, 1000, 1373, 1646
Hpy188III TCNNGA 6 cut(s) 241, 503, 722, 1358, 1403, 1664
Hpy8I GTNNAC 2 cut(s) 313, 1521
Hpy99I CGWCG 2 cut(s) 875, 1448
HpyAV CCTTC 7 cut(s) 33, 197, 337, 669, 1053, 1064, 1394
HpyCH4III ACNGT 6 cut(s) 60, 249, 1243, 1409, 1548, 1583
HpyCH4IV ACGT 1 cut(s) 1651
HpyCH4V TGCA 8 cut(s) 308, 520, 710, 920, 1225, 1282, 1351, 1657
HpyF10VI GCNNNNNNNGC 6 cut(s) 60, 105, 938, 1343, 1509, 1722
HpyF3I CTNAG 7 cut(s) 175, 662, 830, 1107, 1138, 1200, 1211
HpySE526I ACGT 1 cut(s) 1651
Hsp92I GRCGYC 1 cut(s) 1247
Hsp92II CATG 7 cut(s) 173, 418, 535, 598, 652, 911, 1052
HspAI GCGC 2 cut(s) 1177, 1247
KasI GGCGCC 1 cut(s) 1246
Ksp22I TGATCA 1 cut(s) 1101
Kzo9I GATC 3 cut(s) 1101, 1459, 1639
LmnI GCTCC 2 cut(s) 184, 1592
Lsp1109I GCAGC 6 cut(s) 17, 370, 792, 1266, 1725, 1728
LweI GCATC 6 cut(s) 108, 295, 346, 555, 1011, 1491
MaeI CTAG 5 cut(s) 407, 515, 729, 1428, 1457
MaeII ACGT 1 cut(s) 1651
MaeIII GTNAC 4 cut(s) 249, 1141, 1291, 1452
MalI GATC 3 cut(s) 1103, 1461, 1641
MbiI CCGCTC 1 cut(s) 1204
MboI GATC 3 cut(s) 1101, 1459, 1639
MboII GAAGA 9 cut(s) 5, 8, 25, 710, 878, 888, 1030, 1331, 1679
MfeI CAATTG 1 cut(s) 585
MflI RGATCY 1 cut(s) 1639
MhlI GDGCHC 1 cut(s) 1530
MlsI TGGCCA 1 cut(s) 758
MluCI AATT 7 cut(s) 328, 585, 639, 834, 985, 1040, 1304
MluNI TGGCCA 1 cut(s) 758
Mly113I GGCGCC 1 cut(s) 1247
MlyI GAGTC 2 cut(s) 452, 1373
MmeI TCCRAC 2 cut(s) 862, 1036
Mox20I TGGCCA 1 cut(s) 758
MroXI GAANNNNTTC 2 cut(s) 498, 1044
MscI TGGCCA 1 cut(s) 758
MseI TTAA 4 cut(s) 432, 839, 966, 1307
MslI CAYNNNNRTG 1 cut(s) 1356
Msp20I TGGCCA 1 cut(s) 758
MspA1I CMGCKG 1 cut(s) 1465
MspI CCGG 1 cut(s) 1732
MspR9I CCNGG 2 cut(s) 902, 1343
MunI CAATTG 1 cut(s) 585
Mva1269I GAATGC 2 cut(s) 1097, 1367
MvaI CCWGG 2 cut(s) 902, 1343
MvnI CGCG 1 cut(s) 1177
MwoI GCNNNNNNNGC 6 cut(s) 60, 105, 938, 1343, 1509, 1722
NarI GGCGCC 1 cut(s) 1247
NdeI CATATG 1 cut(s) 522
NdeII GATC 3 cut(s) 1101, 1459, 1639
NlaIII CATG 7 cut(s) 173, 418, 535, 598, 652, 911, 1052
NlaIV GGNNCC 4 cut(s) 1131, 1248, 1504, 1594
NmeAIII GCCGAG 1 cut(s) 1100
NmuCI GTSAC 1 cut(s) 1141
NspI RCATGY 1 cut(s) 535
OliI CACNNNNGTG 1 cut(s) 1356
PctI GAATGC 2 cut(s) 1097, 1367
PdmI GAANNNNTTC 2 cut(s) 498, 1044
PfeI GAWTC 3 cut(s) 506, 725, 980
PkrI GCNGC 7 cut(s) 7, 385, 782, 1281, 1715, 1718, 1741
PleI GAGTC 2 cut(s) 451, 1373
PluTI GGCGCC 1 cut(s) 1250
PpsI GAGTC 2 cut(s) 451, 1373
PpuMI RGGWCCY 1 cut(s) 1129
Psp5II RGGWCCY 1 cut(s) 1129
Psp6I CCWGG 2 cut(s) 900, 1341
PspFI CCCAGC 1 cut(s) 1133
PspGI CCWGG 2 cut(s) 900, 1341
PspN4I GGNNCC 4 cut(s) 1131, 1248, 1504, 1594
PspPI GGNCC 4 cut(s) 904, 1129, 1502, 1729
PspPPI RGGWCCY 1 cut(s) 1129
PsuI RGATCY 1 cut(s) 1639
PvuII CAGCTG 1 cut(s) 1465
RsaI GTAC 3 cut(s) 413, 1520, 1545
RsaNI GTAC 3 cut(s) 412, 1519, 1544
RseI CAYNNNNRTG 1 cut(s) 1356
Rsr2I CGGWCCG 1 cut(s) 1729
RsrII CGGWCCG 1 cut(s) 1729
SaqAI TTAA 4 cut(s) 432, 839, 966, 1307
SatI GCNGC 7 cut(s) 6, 384, 781, 1280, 1714, 1717, 1740
Sau3AI GATC 3 cut(s) 1101, 1459, 1639
Sau96I GGNCC 4 cut(s) 904, 1129, 1502, 1729
SchI GAGTC 2 cut(s) 452, 1373
ScrFI CCNGG 2 cut(s) 902, 1343
SduI GDGCHC 1 cut(s) 1530
SfaNI GCATC 6 cut(s) 108, 295, 346, 555, 1011, 1491
SfcI CTRYAG 1 cut(s) 43
SfoI GGCGCC 1 cut(s) 1248
SinI GGWCC 2 cut(s) 1129, 1729
SmiMI CAYNNNNRTG 1 cut(s) 1356
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
Sse9I AATT 7 cut(s) 328, 585, 639, 834, 985, 1040, 1304
SsiI CCGC 4 cut(s) 1024, 1204, 1394, 1561
SspDI GGCGCC 1 cut(s) 1246
SspMI CTAG 5 cut(s) 407, 515, 729, 1428, 1457
StyD4I CCNGG 2 cut(s) 900, 1341
TaaI ACNGT 6 cut(s) 60, 249, 1243, 1409, 1548, 1583
TaiI ACGT 1 cut(s) 1654
TaqI TCGA 6 cut(s) 240, 441, 563, 723, 945, 1404
TasI AATT 7 cut(s) 328, 585, 639, 834, 985, 1040, 1304
TatI WGTACW 1 cut(s) 1518
TfiI GAWTC 3 cut(s) 506, 725, 980
Tru1I TTAA 4 cut(s) 432, 839, 966, 1307
Tru9I TTAA 4 cut(s) 432, 839, 966, 1307
TscAI CASTG 5 cut(s) 132, 315, 1111, 1146, 1248
TseFI GTSAC 1 cut(s) 1141
TseI GCWGC 7 cut(s) 5, 383, 780, 1279, 1713, 1716, 1739
Tsp45I GTSAC 1 cut(s) 1141
TspDTI ATGAA 6 cut(s) 282, 302, 507, 951, 1037, 1332
TspGWI ACGGA 3 cut(s) 242, 888, 1742
TspRI CASTG 5 cut(s) 132, 315, 1111, 1146, 1248
VpaK11BI GGWCC 2 cut(s) 1129, 1729
XapI RAATTY 1 cut(s) 834
XceI RCATGY 1 cut(s) 535
XmnI GAANNNNTTC 2 cut(s) 498, 1044
XspI CTAG 5 cut(s) 407, 515, 729, 1428, 1457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.