Rroxscaffold_4G00278610

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0009192
Physical Location & Seq
Forward (+)
1539986 .. 1546733
6748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00278610.1

Sequence Viewer

Length: 1557 bp
ATGGCAGCTTCTCTTCTTCTCCCTTCTCACTTCTGCAACACCTACAGGATAAGCAAACTCTGCTTACATGACATGCAGTCAGCAAATCCACACAAAGGCATCACTTGCTTATTCCCTGTTAGACCACTGGCCTCAAGGTCTTTTGCTTCAGTTGGGTCAGTGGAAAGTCATGTCTCATCTCCAAACAACACCCACAGCAGTTCTGAAGGTTCTAAAACATCCGATGGGACGAAGAATGATTTCGAGAGAGAGTTACAGGAGTTGTTTGATGAAGTGAAAATGTTGGTTATGAATGGGAATAAAGAGGATGCAGTGGACTTACTTCAAGCGAATTATGAGGCTGTGAAGGAGAGGATGGATGTTGGTGTTAGAGGCATTGAGGAAGCTGCTACGATTGACATCATAGCTCTAGGGTACATGGCTATTGGCGACTTTAAGTTTGTCGAGTCATTACTGGATATGTTGAATGAGATTGTTGGCAGTCTAAAGGATGATGAACCACTTCTGGATTCAGTTCTAGTGCATATGGGAAGCATGTATTCAACTTTGGGGAAGTTTGAGAAATCGATGCTTGTATATAGGAGGGCAATTGATAACATGGAGAACATATATGGGAAAAATAGTGTTTTTCTTATCACACCAATTTTGGGCATGGCGAAAGTTCTCAGTTCTATTGGAAGGACTACAAAAGCAGTAGAGTTCTACCATCGTGCAATAACTCTTCTCGAATCTAGCAGAGGTGCTGAAAGTGAGGATTTGGCCATACCTTTGTTTGGTCTTGGCAGCCTTTTACTCAAACAAGGGAAACCTATTGAGGCAGAAACTCCTTTTCTAAGAATTTTAAATGTATACACAAAGTTGTATGGAGAAGACGACGGAAGAGTTGGAATGGCTATGAGTTCCCTGGCCCATGTGAAGTGTGCAATGGGAAAGGCAAATGAAGCAATCGATTTATATAAAAAGGCTCTTAAAGTCATCAAGGATTCCAATTATATGGCTTCAGATGACAGCATAGTGGAGAAGATGCGGATAGATTTGGCAGAATTACTTCATGCTGTTGGAAGGGGAAAGGAAGGCCGAGAGCTACTGGAGGAATGCTTGCTGATCACTGAGAAACATAAAGGCAAAGAGGACCCCAGTTCAGTGACACACCTTATCAATCTCGCAACTTCACATTCGCGCTCAAAGAACTATGTGGAGGCTGAGCGCTTGCTGAGGATGAGTTTGCAGGTATTGGCAAAGACAGTGGCGCCCGATGACCAATCCATCTCGTTCCCAATGTTGCACCTCGCCGTTACTCTCTACCAATTAAAACGGGATGAAGAAGCTGAACAACTTGCCCTCCAGGCTTTGCACATTCGTGAAAAAGCATTCGGAAAGGACTCCCTTCCCGTTGCGGAGGCTCTCGACTGTCTGGTCTCAATCCAAACTAGATTGACAAGGGACGATGAAGAGTTACTGGATCAGCTGGAGAGGGTTTTACGCATCCAAGAGAAAGAGTTCGGCCCCGAGAGCAAGGAGGTTTTGACAACCCTAAAAAAGTTGTACATTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_8

Protein Analysis

518

Amino Acids

57.66

Weight (kDa)

5.52

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_NPHP3 PF24885 160 - 243 3.7e-07 Nephrocystin-3 TPR domain
TPR_12 PF13424 171 - 243 2.8e-06 Tetratricopeptide repeat
TPR_MalT PF17874 172 - 453 1.4e-14 MalT-like TPR region
TPR_12 PF13424 216 - 286 3e-09 Tetratricopeptide repeat
TPR_12 PF13424 254 - 325 4.2e-11 Tetratricopeptide repeat
TPR_12 PF13424 344 - 412 2.3e-09 Tetratricopeptide repeat
TPR_NPHP3 PF24885 404 - 499 9.3e-06 Nephrocystin-3 TPR domain
TPR_10 PF13374 427 - 462 9.8e-08 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1415
Acc36I ACCTGC 1 cut(s) 1219
AccB1I GGYRCC 1 cut(s) 1249
AccI GTMKAC 1 cut(s) 849
AccII CGCG 1 cut(s) 1180
AciI CCGC 2 cut(s) 1027, 1397
AclWI GGATC 1 cut(s) 1470
AcoI YGGCCR 1 cut(s) 759
AcsI RAATTY 1 cut(s) 837
AcuI CTGAAG 3 cut(s) 132, 225, 984
AcyI GRCGYC 1 cut(s) 1250
AfaI GTAC 2 cut(s) 416, 1547
AfeI AGCGCT 1 cut(s) 1208
AfiI CCNNNNNNNGG 3 cut(s) 95, 647, 773
AgsI TTSAA 3 cut(s) 326, 466, 543
AhdI GACNNNNNGTC 1 cut(s) 76
AjnI CCWGG 2 cut(s) 903, 1344
AleI CACNNNNGTG 1 cut(s) 1359
AluBI AGCT 6 cut(s) 8, 386, 407, 1084, 1328, 1468
AluI AGCT 6 cut(s) 8, 386, 407, 1084, 1328, 1468
Alw26I GTCTC 2 cut(s) 178, 1423
AlwI GGATC 1 cut(s) 1470
Ama87I CYCGRG 1 cut(s) 1508
Aor51HI AGCGCT 1 cut(s) 1208
AoxI GGCC 5 cut(s) 129, 759, 906, 1075, 1504
ApeKI GCWGC 3 cut(s) 5, 386, 783
ApoI RAATTY 1 cut(s) 837
ArsI GACNNNNNNTTYG 2 cut(s) 422, 454
Asp700I GAANNNNTTC 4 cut(s) 239, 501, 1047, 1499
AspLEI GCGC 3 cut(s) 1182, 1209, 1252
AspS9I GGNCC 3 cut(s) 907, 1132, 1505
AvaI CYCGRG 1 cut(s) 1508
AvaII GGWCC 1 cut(s) 1132
BalI TGGCCA 1 cut(s) 761
BanI GGYRCC 1 cut(s) 1249
BbsI GAAGAC 1 cut(s) 876
BbvCI CCTCAGC 1 cut(s) 1214
BbvI GCAGC 3 cut(s) 17, 373, 795
BccI CCATC 4 cut(s) 218, 349, 714, 1274
BceAI ACGGC 1 cut(s) 1277
BciT130I CCWGG 2 cut(s) 905, 1346
BclI TGATCA 1 cut(s) 1104
BcoDI GTCTC 2 cut(s) 178, 1423
BfaI CTAG 4 cut(s) 410, 518, 732, 1431
BfmI CTRYAG 1 cut(s) 43
BfoI RGCGCY 2 cut(s) 1210, 1253
BfuAI ACCTGC 1 cut(s) 1219
BglI GCCNNNNNGGC 1 cut(s) 1346
BisI GCNGC 3 cut(s) 6, 387, 784
BlpI GCTNAGC 1 cut(s) 1203
BlsI GCNGC 3 cut(s) 7, 388, 785
Bme1390I CCNGG 2 cut(s) 905, 1346
Bme18I GGWCC 1 cut(s) 1132
BmeRI GACNNNNNGTC 1 cut(s) 76
BmeT110I CYCGRG 1 cut(s) 1508
BmgT120I GGNCC 3 cut(s) 907, 1132, 1505
BmiI GGNNCC 3 cut(s) 1134, 1251, 1507
BmrFI CCNGG 2 cut(s) 905, 1346
BmrI ACTGGG 1 cut(s) 1131
BmsI GCATC 5 cut(s) 108, 298, 558, 1014, 1494
BmuI ACTGGG 1 cut(s) 1131
BpiI GAAGAC 1 cut(s) 876
BpmI CTGGAG 3 cut(s) 1109, 1328, 1490
Bpu10I CCTNAGC 1 cut(s) 1214
Bpu1102I GCTNAGC 1 cut(s) 1203
BpuEI CTTGAG 1 cut(s) 118
Bsa29I ATCGAT 2 cut(s) 566, 948
BsaBI GATNNNNATC 1 cut(s) 398
BsaHI GRCGYC 1 cut(s) 1250
BsaI GGTCTC 1 cut(s) 1423
BsaJI CCNNGG 1 cut(s) 903
BsaXI ACNNNNNCTCC 2 cut(s) 1326, 1356
Bsc4I CCNNNNNNNGG 3 cut(s) 95, 647, 773
Bse1I ACTGG 5 cut(s) 132, 459, 1092, 1137, 1464
Bse3DI GCAATG 1 cut(s) 930
Bse8I GATNNNNATC 1 cut(s) 398
BseBI CCWGG 2 cut(s) 905, 1346
BseCI ATCGAT 2 cut(s) 566, 948
BseDI CCNNGG 1 cut(s) 903
BseGI GGATG 8 cut(s) 218, 313, 360, 364, 496, 1224, 1324, 1485
BseJI GATNNNNATC 1 cut(s) 398
BseLI CCNNNNNNNGG 3 cut(s) 95, 647, 773
BseMI GCAATG 1 cut(s) 930
BseMII CTCAG 4 cut(s) 679, 1101, 1194, 1205
BseNI ACTGG 5 cut(s) 132, 459, 1092, 1137, 1464
BseXI GCAGC 3 cut(s) 17, 373, 795
Bsh1236I CGCG 1 cut(s) 1180
BshFI GGCC 5 cut(s) 131, 761, 908, 1077, 1506
BshNI GGYRCC 1 cut(s) 1249
BshVI ATCGAT 2 cut(s) 566, 948
BsiHKCI CYCGRG 1 cut(s) 1508
BslFI GGGAC 2 cut(s) 241, 1457
BslI CCNNNNNNNGG 3 cut(s) 95, 647, 773
BsmAI GTCTC 2 cut(s) 178, 1423
BsmFI GGGAC 2 cut(s) 241, 1457
BsmI GAATGC 2 cut(s) 1100, 1370
BsnI GGCC 5 cut(s) 131, 761, 908, 1077, 1506
Bso31I GGTCTC 1 cut(s) 1423
BsoBI CYCGRG 1 cut(s) 1508
Bsp1407I TGTACA 1 cut(s) 1545
Bsp143I GATC 2 cut(s) 1104, 1462
Bsp1720I GCTNAGC 1 cut(s) 1203
BspACI CCGC 2 cut(s) 1027, 1397
BspANI GGCC 5 cut(s) 131, 761, 908, 1077, 1506
BspCNI CTCAG 4 cut(s) 678, 1102, 1195, 1206
BspDI ATCGAT 2 cut(s) 566, 948
BspFNI CGCG 1 cut(s) 1180
BspLI GGNNCC 3 cut(s) 1134, 1251, 1507
BspMI ACCTGC 1 cut(s) 1219
BspPI GGATC 1 cut(s) 1470
BspT107I GGYRCC 1 cut(s) 1249
BspTNI GGTCTC 1 cut(s) 1423
BsrDI GCAATG 1 cut(s) 930
BsrGI TGTACA 1 cut(s) 1545
BsrI ACTGG 5 cut(s) 132, 459, 1092, 1137, 1464
BssECI CCNNGG 1 cut(s) 903
BssMI GATC 2 cut(s) 1104, 1462
BssNAI GTATAC 1 cut(s) 850
BssNI GRCGYC 1 cut(s) 1250
Bst1107I GTATAC 1 cut(s) 850
Bst2UI CCWGG 2 cut(s) 905, 1346
Bst4CI ACNGT 2 cut(s) 1246, 1412
Bst6I CTCTTC 4 cut(s) 18, 726, 874, 1446
BstACI GRCGYC 1 cut(s) 1250
BstAPI GCANNNNNTGC 2 cut(s) 60, 105
BstAUI TGTACA 1 cut(s) 1545
BstC8I GCNNGC 2 cut(s) 1100, 1211
BstDEI CTNAG 6 cut(s) 665, 833, 1110, 1203, 1214, 1554
BstF5I GGATG 8 cut(s) 218, 313, 360, 364, 496, 1224, 1324, 1485
BstFNI CGCG 1 cut(s) 1180
BstH2I RGCGCY 2 cut(s) 1210, 1253
BstHHI GCGC 3 cut(s) 1182, 1209, 1252
BstKTI GATC 2 cut(s) 1107, 1465
BstMAI GTCTC 2 cut(s) 178, 1423
BstMBI GATC 2 cut(s) 1104, 1462
BstMWI GCNNNNNNNGC 5 cut(s) 60, 105, 941, 1346, 1512
BstNI CCWGG 2 cut(s) 905, 1346
BstNSI RCATGY 2 cut(s) 76, 538
BstSCI CCNGG 2 cut(s) 903, 1344
BstSFI CTRYAG 1 cut(s) 43
BstUI CGCG 1 cut(s) 1180
BstV1I GCAGC 3 cut(s) 17, 373, 795
BstV2I GAAGAC 1 cut(s) 876
BstXI CCANNNNNNTGG 1 cut(s) 994
BstZ17I GTATAC 1 cut(s) 850
Bsu15I ATCGAT 2 cut(s) 566, 948
BsuRI GGCC 5 cut(s) 131, 761, 908, 1077, 1506
BsuTUI ATCGAT 2 cut(s) 566, 948
BtsCI GGATG 8 cut(s) 218, 313, 360, 364, 496, 1224, 1324, 1485
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 6 cut(s) 125, 165, 318, 1107, 1149, 1251
BveI ACCTGC 1 cut(s) 1219
Cac8I GCNNGC 2 cut(s) 1100, 1211
CfoI GCGC 3 cut(s) 1182, 1209, 1252
Cfr13I GGNCC 3 cut(s) 907, 1132, 1505
ClaI ATCGAT 2 cut(s) 566, 948
Csp6I GTAC 2 cut(s) 415, 1546
CspCI CAANNNNNGTGG 2 cut(s) 1227, 1262
CviAII CATG 9 cut(s) 68, 73, 170, 418, 535, 598, 652, 911, 1052
CviQI GTAC 2 cut(s) 415, 1546
DdeI CTNAG 6 cut(s) 665, 833, 1110, 1203, 1214, 1554
DinI GGCGCC 1 cut(s) 1251
DpnI GATC 2 cut(s) 1106, 1464
DpnII GATC 2 cut(s) 1104, 1462
DraI TTTAAA 1 cut(s) 843
DrdI GACNNNNNNGTC 1 cut(s) 1415
DriI GACNNNNNGTC 1 cut(s) 76
DseDI GACNNNNNNGTC 1 cut(s) 1415
EaeI YGGCCR 1 cut(s) 759
Eam1104I CTCTTC 4 cut(s) 18, 726, 874, 1446
Eam1105I GACNNNNNGTC 1 cut(s) 76
EarI CTCTTC 4 cut(s) 18, 726, 874, 1446
Eco31I GGTCTC 1 cut(s) 1423
Eco47I GGWCC 1 cut(s) 1132
Eco47III AGCGCT 1 cut(s) 1208
Eco57I CTGAAG 3 cut(s) 132, 225, 984
Eco88I CYCGRG 1 cut(s) 1508
EcoO109I RGGNCCY 1 cut(s) 1132
EcoRII CCWGG 2 cut(s) 903, 1344
EgeI GGCGCC 1 cut(s) 1251
EheI GGCGCC 1 cut(s) 1251
FaeI CATG 9 cut(s) 71, 76, 173, 421, 538, 601, 655, 914, 1055
FaqI GGGAC 2 cut(s) 241, 1457
FatI CATG 9 cut(s) 67, 72, 169, 417, 534, 597, 651, 910, 1051
FauNDI CATATG 1 cut(s) 525
FbaI TGATCA 1 cut(s) 1104
FblI GTMKAC 1 cut(s) 849
Fnu4HI GCNGC 3 cut(s) 6, 387, 784
FokI GGATG 8 cut(s) 205, 320, 367, 371, 503, 1231, 1331, 1472
Fsp4HI GCNGC 3 cut(s) 6, 387, 784
FspBI CTAG 4 cut(s) 410, 518, 732, 1431
GlaI GCGC 3 cut(s) 1181, 1208, 1251
GluI GCNGC 3 cut(s) 6, 387, 784
GsuI CTGGAG 3 cut(s) 1109, 1328, 1490
HaeII RGCGCY 2 cut(s) 1210, 1253
HaeIII GGCC 5 cut(s) 131, 761, 908, 1077, 1506
HhaI GCGC 3 cut(s) 1182, 1209, 1252
Hin1I GRCGYC 1 cut(s) 1250
Hin1II CATG 9 cut(s) 71, 76, 173, 421, 538, 601, 655, 914, 1055
Hin6I GCGC 3 cut(s) 1180, 1207, 1250
HinP1I GCGC 3 cut(s) 1180, 1207, 1250
HinfI GANTC 5 cut(s) 446, 509, 728, 983, 1382
Hpy166II GTNNAC 2 cut(s) 316, 850
Hpy188I TCNGA 4 cut(s) 205, 223, 1003, 1376
Hpy188III TCNNGA 5 cut(s) 244, 506, 725, 1361, 1406
Hpy8I GTNNAC 2 cut(s) 316, 850
Hpy99I CGWCG 1 cut(s) 878
HpyAV CCTTC 7 cut(s) 33, 200, 340, 672, 1056, 1067, 1397
HpyCH4III ACNGT 2 cut(s) 1246, 1412
HpyCH4V TGCA 9 cut(s) 36, 76, 311, 523, 713, 923, 1228, 1285, 1354
HpyF10VI GCNNNNNNNGC 5 cut(s) 60, 105, 941, 1346, 1512
HpyF3I CTNAG 6 cut(s) 665, 833, 1110, 1203, 1214, 1554
Hsp92I GRCGYC 1 cut(s) 1250
Hsp92II CATG 9 cut(s) 71, 76, 173, 421, 538, 601, 655, 914, 1055
HspAI GCGC 3 cut(s) 1180, 1207, 1250
KasI GGCGCC 1 cut(s) 1249
Ksp22I TGATCA 1 cut(s) 1104
Kzo9I GATC 2 cut(s) 1104, 1462
Lsp1109I GCAGC 3 cut(s) 17, 373, 795
LweI GCATC 5 cut(s) 108, 298, 558, 1014, 1494
MaeI CTAG 4 cut(s) 410, 518, 732, 1431
MaeIII GTNAC 4 cut(s) 252, 1144, 1294, 1455
MalI GATC 2 cut(s) 1106, 1464
MboI GATC 2 cut(s) 1104, 1462
MboII GAAGA 9 cut(s) 5, 8, 244, 713, 881, 891, 1033, 1334, 1463
MfeI CAATTG 1 cut(s) 588
MlsI TGGCCA 1 cut(s) 761
MluCI AATT 7 cut(s) 331, 588, 642, 837, 988, 1043, 1307
MluNI TGGCCA 1 cut(s) 761
Mly113I GGCGCC 1 cut(s) 1250
MlyI GAGTC 2 cut(s) 455, 1376
MmeI TCCRAC 2 cut(s) 865, 1039
Mox20I TGGCCA 1 cut(s) 761
MroXI GAANNNNTTC 4 cut(s) 239, 501, 1047, 1499
MscI TGGCCA 1 cut(s) 761
MseI TTAA 4 cut(s) 435, 842, 969, 1310
MslI CAYNNNNRTG 1 cut(s) 1359
Msp20I TGGCCA 1 cut(s) 761
MspA1I CMGCKG 1 cut(s) 1468
MspR9I CCNGG 2 cut(s) 905, 1346
MunI CAATTG 1 cut(s) 588
Mva1269I GAATGC 2 cut(s) 1100, 1370
MvaI CCWGG 2 cut(s) 905, 1346
MvnI CGCG 1 cut(s) 1180
MwoI GCNNNNNNNGC 5 cut(s) 60, 105, 941, 1346, 1512
NarI GGCGCC 1 cut(s) 1250
NdeI CATATG 1 cut(s) 525
NdeII GATC 2 cut(s) 1104, 1462
NlaIII CATG 9 cut(s) 71, 76, 173, 421, 538, 601, 655, 914, 1055
NlaIV GGNNCC 3 cut(s) 1134, 1251, 1507
NmeAIII GCCGAG 1 cut(s) 1103
NmuCI GTSAC 1 cut(s) 1144
NspI RCATGY 2 cut(s) 76, 538
OliI CACNNNNGTG 1 cut(s) 1359
PctI GAATGC 2 cut(s) 1100, 1370
PdmI GAANNNNTTC 4 cut(s) 239, 501, 1047, 1499
PfeI GAWTC 3 cut(s) 509, 728, 983
PkrI GCNGC 3 cut(s) 7, 388, 785
PleI GAGTC 2 cut(s) 454, 1376
PluTI GGCGCC 1 cut(s) 1253
PpsI GAGTC 2 cut(s) 454, 1376
PpuMI RGGWCCY 1 cut(s) 1132
Psp5II RGGWCCY 1 cut(s) 1132
Psp6I CCWGG 2 cut(s) 903, 1344
PspGI CCWGG 2 cut(s) 903, 1344
PspN4I GGNNCC 3 cut(s) 1134, 1251, 1507
PspPI GGNCC 3 cut(s) 907, 1132, 1505
PspPPI RGGWCCY 1 cut(s) 1132
PvuII CAGCTG 1 cut(s) 1468
RsaI GTAC 2 cut(s) 416, 1547
RsaNI GTAC 2 cut(s) 415, 1546
RseI CAYNNNNRTG 1 cut(s) 1359
SaqAI TTAA 4 cut(s) 435, 842, 969, 1310
SatI GCNGC 3 cut(s) 6, 387, 784
Sau3AI GATC 2 cut(s) 1104, 1462
Sau96I GGNCC 3 cut(s) 907, 1132, 1505
SchI GAGTC 2 cut(s) 455, 1376
ScrFI CCNGG 2 cut(s) 905, 1346
SfaNI GCATC 5 cut(s) 108, 298, 558, 1014, 1494
SfcI CTRYAG 1 cut(s) 43
SfoI GGCGCC 1 cut(s) 1251
SinI GGWCC 1 cut(s) 1132
SmiMI CAYNNNNRTG 1 cut(s) 1359
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
Sse9I AATT 7 cut(s) 331, 588, 642, 837, 988, 1043, 1307
SsiI CCGC 2 cut(s) 1027, 1397
SspDI GGCGCC 1 cut(s) 1249
SspMI CTAG 4 cut(s) 410, 518, 732, 1431
StyD4I CCNGG 2 cut(s) 903, 1344
TaaI ACNGT 2 cut(s) 1246, 1412
TaqI TCGA 6 cut(s) 243, 444, 566, 726, 948, 1407
TasI AATT 7 cut(s) 331, 588, 642, 837, 988, 1043, 1307
TatI WGTACW 1 cut(s) 1545
TfiI GAWTC 3 cut(s) 509, 728, 983
Tru1I TTAA 4 cut(s) 435, 842, 969, 1310
Tru9I TTAA 4 cut(s) 435, 842, 969, 1310
TscAI CASTG 6 cut(s) 132, 165, 318, 1114, 1149, 1251
TseFI GTSAC 1 cut(s) 1144
TseI GCWGC 3 cut(s) 5, 386, 783
Tsp45I GTSAC 1 cut(s) 1144
TspDTI ATGAA 7 cut(s) 285, 305, 510, 954, 1040, 1335, 1464
TspGWI ACGGA 1 cut(s) 891
TspRI CASTG 6 cut(s) 132, 165, 318, 1114, 1149, 1251
VpaK11BI GGWCC 1 cut(s) 1132
XapI RAATTY 1 cut(s) 837
XceI RCATGY 2 cut(s) 76, 538
XmiI GTMKAC 1 cut(s) 849
XmnI GAANNNNTTC 4 cut(s) 239, 501, 1047, 1499
XspI CTAG 4 cut(s) 410, 518, 732, 1431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.