FvH4_7g33380

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0012655
Physical Location & Seq
Reverse (-)
23753884 .. 23758498
4615 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33380.t1

Sequence Viewer

Length: 3771 bp
ATGGTTCACGCTCAACCCCAGGAAGAACTCATGCAGAACATGGAAAAGAAGAAAGAAGCAACTGATGAGGATGATGAGACAAAGGGAAGCTCATCAGAAACGTTGGGATTCAGTAAGCTGCTTAGCTATGCCGACAGATGGGATTGGGTTATGATGGTATTGGGGACTTTGGGTTCTATTGTCCATGGTATGGCTTTTCCAGTTGGATATCTACTGCTTGGCAGAGCACTCAATGCCTTTGGGAGCAATATTAACGACACAGCTGCCATGGTTAAAGCACTGAACAAGGTTATTCCCTTTGTGTGGTACATGGCCTTCGCCACATTTCCGGCTGGAATACTTGAAATTGGATGCTGGATGTATTCAAGTGAAAGACAAGTGGCACGTCTAAGACTGGCATATCTAAGAGCAGTGCTCAGCCAGGAGGTTGGGGCTTTCGATACAGACTTAACCAGTGGAAAAGTGATCACCGGAATTAGTAACCACACCAGTATCATACACGATGCAATCGGAGAGAAGTTGGGTCATTTTCTTTCAAGTTTGGCAACTTTCTTTTCGGGAATTTTGATTGCTGCAATATGCTGTTGGGAAGTTGCACTGCTTACCTTGTTGGTTGTTCCTTTGATTCTTGTAATCGGAGCCACTTACACTAAGAAAATGAACGCCATCTCAGCTGCTAGGATTGTTTACCTGTCGGAAGCTACCTCTATGGTAGAACAGACCATATGTCAAATCAAAACAGTATATGCATTCGTTGGAGAAAACTCGGCGATCAAGTCTTTCTCAAACTGCATGGCCAAACAGTATTTGCTAAGCAAAGGGGAGGCTCTAACAAAGGGAGTTGGAACAGGAATGCTTCAAACTGTGACCTTCATTTCTTGGGCTATCATCATTTGGGTTGGTGCTGTTGTAGTCACTGCCAAGAGGGCAAGCGGTGGGGATATTATAGCTGCTGTCATGAGCATTCTCTTTGGAGCCATATCACTTACTTATGCTGCGCCGGATATGCAAGTCTTCAATCAGGCAAAGGCTGCAGGAACTGAAGTTTTCAAGGTGATCAATAGAAAGCCAGCTATAAGTTATGATTCACCCGGGAAGGAACTTGATAAAATTTACGGCAACATTGACATACGCGATGTTTACTTTTCCTACCCTTCCCGGCCTGACAGAGCCATCCTTCAAGGCTTTTCATTGTCAATTCCAGCAGGAAAAACGGTAGCCTTTGTAGGTAGCAGTGGCTGTGGAAAGAGTACTATCATCTCACTAGTTGCAAGATTCTATGATCTTGCAAAAGGGGAGATTCTGATTGACAACCACAACATCAAGGATCTTGACTTGAAATTCCTGAGGAAAAACATAGGAGCTGTTTCGCAAGAACCATCACTGTTTGCAGGCACCATTGCAGACAATATGAAAGTTGGTAAGATGGATGCGGAAGATGTAGAGATCCAGAAAGCATCAGTGATGGCAAATGCACACACTTTCATATCCCAACTTCCAAATCAGTACTCCACAGAGGTAGGACAAAGGGGAGTACAGTTATCTGGAGGACAGAAGCAGAGAATCGCCATAGCAAGAGCCATTCTCAAGAATCCTCCTATTCTTCTGCTTGATGAGGCAACAAGTGCTCTTGACTCGGAATCTGAGAAGATGGTTCAAGAAGCTCTTGATAAGGCTATGCAGGGAAGGACAGTTATCTTGATTGCACATAGACTATCAACTATTGTTAATGCAGATATGATTGCGGTTGTAGAGAATGGACAAGTTACAGAATCAGGAACTCACCGGAGCTTACTTGAAAGCAGTAAATTCTACAACAACTTATTTAGCATGCAAAATCTCAACCCAGTTCATGAATCAAGAGAAGATGGTCCCTCTGAAAAATCTGAAAGCATCCACCAAAAGTGTTCACCTGAACAGATAAGACAAGCCAAAGAGCCCCACGGCGACCGATATCCTAATGAGCCTCCCAAGCAAGAAGAAGAGGCAATAAGAAAAAGAGCCATATTCTTCAGAATCTGGTTTGGCTTGAAAAAGAGAGAACTTGTAAAGATTGCTCTTGGTTCTTTTGCAGCAGCTTTCTCTGGTATATCAAAGCCTGTCTTTGGGTATTACATCATAACAATAGGAGTAGCATACTACCACAAGCATGCTGAGAGAGAAGTCTCAAAATATTCAATCACATTTGCTCTAATTGGATTCATTTCATTGTTCTCTCACACCTTGCAACACTACTTGTTCGGAATGGTTGGAGAGAAGGCCATGACAAACCTGAGACGCGCTCTCTATTCAGGTGTGCTACGCAATGAAATCGGATGGTATGAGAAACCTGAGAATGGCATTGGACAGCTCACCTCAAGGATCATCAATGATACTTCAATGGTCAAAGTGGTAATTGCTGACCGGATGTCTGTCATTGTCCAGTGCATTTCCTCCATACTGATTGCAACCGTTGTGAGCATGTATGTCAACTGGAGAATGGGGTTGGTAGCTTGGGCTGTGATGCCTTGCCACTTCATTGGTGGTCTCATTCAAGCCAAGTCTGCAAAGGGTTTTGCAGGAGAATCAGCTGCTGCACATAATGAACTTGTTTCTCTTGCTTCTGAGTCTGCACAAAACATAAGAACCGTTGCATCGTTTTGCCATGAAGATCATATACTCAAAAAAGCCGAAATATCTCTGGAAACCCCCAAGAAAAGGAGCATGAGACAAAGTATCAAGTTTGGTATAATTCAGGGAGTTTCTCTTTGCTTATGGAACATTGCACATGCTGTGGCATTGTGGTACACAACAGTTTTAGTTCACAAGAATCAATCGAGCTTCAAAAATGGCATAAGATCATACCAGATTTTCTCTCTCACAGTACCTTCAATCACAGAATTGTGGACATTGATTCCCACCGTCATTTCTGCCATCAACGTGCTTACTCCTGCATTCGAGACCCTTGACCGCAAAACTGAAATAGATCCATGCACACCGGAAACTTCAAATCAGGGGAGAATCAAGGGGAACATTGAATTTCAAAATGTTGAGTTTAATTACCCTTTGAGACCAGAAGTAACTATCCTGAACAACTTCACTGTCCAAATTAAAGCTGGAACAAAAGTGGCTCTTGTCGGCCCAAGTGGAGCTGGTAAATCTTCAGTTCTGGCCCTTCTGCTAAGATTTTATGATCCCTTGAAAGGTAAGATACTCATTGATGGAAAGGAGATAAGGGAATACAATTTGAGATGGCTGAGAACACAAATAGGGTTGGTGCAACAAGAGCCTCTACTTTTTAGCTCCTCAATCAGAGACAATATATGCTATGGGAATGAAAGTGCTTCTGAAACTGAGATTGTAGAGGTATCAAGGGAAGCAAACATTGATGAGTTCATAAGTAATTTGCCTGATGGATATCAAACACTTGTTGGGGAGAAGGGATGCCAACTTTCAGGAGGACAAAAGCAAAGAATAGCCATAGCTAGAACATTGCTAAAGAGGCCTGCAATCTTGCTTCTGGATGAAGCAACAAGTGCCCTTGATGCTGAATCCGAAAAATCTGTGGTGAGCGCATTGGAAGCGATAAATTTGAAAAACAAAGGAGGCCTGCTGTCCAAAACCACACAGATTACAGTTGCACATAGGCTTTCAACAATAATAAACTCAGATATCATCATTGTCATGGACAAAGGTGAGATTGTCGAGTCGGGTTCCCACTCAACCCTTATAACAGCCTCTCAGGGAGTTTATTCAAGATTATATCAGATACAAAGCATGACAGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1257

Amino Acids

138.0

Weight (kDa)

8.36

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 53 - 326 2e-42 ABC transporter transmembrane region
SMC_N PF02463 252 - 585 6.3e-07 RecF/RecN/SMC N terminal domain
ABC_tran PF00005 393 - 542 1e-33 ABC transporter
ABC_membrane PF00664 687 - 949 1e-45 ABC transporter transmembrane region
ABC_tran PF00005 1023 - 1172 8.9e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012655)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g32300 FvH4_7g32320 FvH4_7g33380
malus_domestica MD01G1232000.v1.1 MD01G1232100.v1.1
prunus_persica Prupe.2G322600_v2.0.a1
pyrus_communis pycom01g24050
rosa_chinensis RchiOBHm_Chr1g0383351
rosa_laevigata RLG00000026110
rosa_multiflora Rmu_sc0007173.1_g000013
rosa_roxburghii Rroxscaffold_4G00277370
rosa_rugosa Rorug01G0440700
rosa_samantha Rh1AG466600 Rh1BG423900 Rh1BG424000 Rh1CG437100 Rh1DG456600 Rh1DG456700
rosa_wichuraiana Rw1G040590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3710
AccB1I GGYRCC 1 cut(s) 1394
AccB7I CCANNNNNTGG 1 cut(s) 190
AccII CGCG 2 cut(s) 1134, 2280
AciI CCGC 4 cut(s) 933, 1433, 1745, 2950
AclI AACGTT 1 cut(s) 101
AclWI GGATC 5 cut(s) 1335, 1441, 2369, 2960, 3167
AcoI YGGCCR 1 cut(s) 795
AcsI RAATTY 6 cut(s) 561, 1110, 1340, 1808, 3017, 3568
AcuI CTGAAG 3 cut(s) 1062, 1996, 3126
AfaI GTAC 6 cut(s) 308, 1252, 1508, 1536, 2786, 2865
AfiI CCNNNNNNNGG 7 cut(s) 138, 190, 303, 2105, 2336, 2697, 3182
AhdI GACNNNNNGTC 2 cut(s) 726, 2407
AhlI ACTAGT 1 cut(s) 1264
AjiI CACGTC 1 cut(s) 386
AjnI CCWGG 2 cut(s) 18, 420
AloI GAACNNNNNNTCC 2 cut(s) 157, 189
Alw21I GWGCWC 3 cut(s) 229, 417, 1630
Alw26I GTCTC 8 cut(s) 71, 2170, 2269, 2531, 2701, 2933, 3043, 3288
AlwI GGATC 5 cut(s) 1335, 1441, 2369, 2960, 3167
AlwNI CAGNNNCTG 4 cut(s) 1040, 1239, 2019, 2573
Ama87I CYCGRG 1 cut(s) 1091
AoxI GGCC 8 cut(s) 312, 795, 1160, 2259, 3118, 3150, 3482, 3586
ApoI RAATTY 6 cut(s) 561, 1110, 1340, 1808, 3017, 3568
Asp700I GAANNNNTTC 1 cut(s) 3074
AspLEI GCGC 3 cut(s) 1000, 2282, 3554
AspS9I GGNCC 3 cut(s) 1871, 3119, 3151
AsuC2I CCSGG 3 cut(s) 1092, 1093, 1159
AsuHPI GGTGA 8 cut(s) 460, 1066, 1080, 1775, 1902, 2344, 3559, 3686
AvaI CYCGRG 1 cut(s) 1091
AvaII GGWCC 1 cut(s) 1871
AxyI CCTNAGG 1 cut(s) 1346
BaeGI GKGCMC 1 cut(s) 3520
BaeI ACNNNNGTAYC 2 cut(s) 475, 508
BalI TGGCCA 1 cut(s) 797
BanI GGYRCC 1 cut(s) 1394
BanII GRGCYC 1 cut(s) 1941
BarI GAAGNNNNNNTAC 4 cut(s) 299, 331, 2640, 2672
BbsI GAAGAC 1 cut(s) 1006
Bbv12I GWGCWC 3 cut(s) 229, 417, 1630
BceAI ACGGC 2 cut(s) 1132, 1960
BcgI CGANNNNNNTGC 4 cut(s) 245, 279, 2293, 2327
BciT130I CCWGG 2 cut(s) 20, 422
BclI TGATCA 2 cut(s) 465, 1056
BcnI CCSGG 3 cut(s) 1092, 1093, 1159
BcoDI GTCTC 8 cut(s) 71, 2170, 2269, 2531, 2701, 2933, 3043, 3288
BcuI ACTAGT 1 cut(s) 1264
BfaI CTAG 3 cut(s) 678, 1265, 3465
BfmI CTRYAG 1 cut(s) 1032
BglI GCCNNNNNGGC 1 cut(s) 926
BlpI GCTNAGC 3 cut(s) 122, 416, 812
BmcAI AGTACT 2 cut(s) 1252, 1508
Bme1390I CCNGG 5 cut(s) 20, 422, 1092, 1093, 1159
Bme18I GGWCC 1 cut(s) 1871
BmeRI GACNNNNNGTC 2 cut(s) 726, 2407
BmeT110I CYCGRG 1 cut(s) 1091
BmgBI CACGTC 1 cut(s) 386
BmgT120I GGNCC 3 cut(s) 1871, 3119, 3151
BmiI GGNNCC 5 cut(s) 640, 976, 1396, 1873, 3694
BmrFI CCNGG 5 cut(s) 20, 422, 1092, 1093, 1159
BmrI ACTGGG 1 cut(s) 1841
BmsI GCATC 9 cut(s) 341, 493, 1420, 1466, 1902, 2493, 2642, 3413, 3514
BmuI ACTGGG 1 cut(s) 1841
BpiI GAAGAC 1 cut(s) 1006
BplI GAGNNNNNCTC 6 cut(s) 399, 431, 1569, 1601, 2266, 2298
BpmI CTGGAG 2 cut(s) 1566, 2494
Bpu1102I GCTNAGC 3 cut(s) 122, 416, 812
BpuEI CTTGAG 2 cut(s) 1571, 2341
BpuMI CCSGG 3 cut(s) 1092, 1093, 1159
BsaBI GATNNNNATC 1 cut(s) 3396
BsaI GGTCTC 3 cut(s) 2531, 2933, 3043
BsaJI CCNNGG 5 cut(s) 18, 184, 267, 1091, 1942
BsaWI WCCGGW 4 cut(s) 470, 1785, 2403, 2977
Bsc4I CCNNNNNNNGG 7 cut(s) 138, 190, 303, 2105, 2336, 2697, 3182
Bse1I ACTGG 7 cut(s) 200, 399, 453, 489, 1847, 2422, 2477
Bse21I CCTNAGG 1 cut(s) 1346
Bse3DI GCAATG 4 cut(s) 1398, 2311, 2760, 3470
Bse8I GATNNNNATC 1 cut(s) 3396
BseBI CCWGG 2 cut(s) 20, 422
BseDI CCNNGG 5 cut(s) 18, 184, 267, 1091, 1942
BseJI GATNNNNATC 1 cut(s) 3396
BseLI CCNNNNNNNGG 7 cut(s) 138, 190, 303, 2105, 2336, 2697, 3182
BseMI GCAATG 4 cut(s) 1398, 2311, 2760, 3470
BseNI ACTGG 7 cut(s) 200, 399, 453, 489, 1847, 2422, 2477
BseRI GAGGAG 1 cut(s) 3274
BseSI GKGCMC 1 cut(s) 3520
BsgI GTGCAG 2 cut(s) 2559, 2595
Bsh1236I CGCG 2 cut(s) 1134, 2280
Bsh1285I CGRYCG 1 cut(s) 1951
BshFI GGCC 8 cut(s) 314, 797, 1162, 2261, 3120, 3152, 3484, 3588
BshNI GGYRCC 1 cut(s) 1394
BsiEI CGRYCG 1 cut(s) 1951
BsiHKAI GWGCWC 3 cut(s) 229, 417, 1630
BsiHKCI CYCGRG 1 cut(s) 1091
BsiSI CCGG 8 cut(s) 329, 471, 1001, 1092, 1159, 1786, 2404, 2978
BslFI GGGAC 2 cut(s) 178, 1857
BslI CCNNNNNNNGG 7 cut(s) 138, 190, 303, 2105, 2336, 2697, 3182
BsmAI GTCTC 8 cut(s) 71, 2170, 2269, 2531, 2701, 2933, 3043, 3288
BsmBI CGTCTC 1 cut(s) 2269
BsmFI GGGAC 2 cut(s) 178, 1857
BsmI GAATGC 4 cut(s) 749, 858, 963, 2933
BsnI GGCC 8 cut(s) 314, 797, 1162, 2261, 3120, 3152, 3484, 3588
Bso31I GGTCTC 3 cut(s) 2531, 2933, 3043
BsoBI CYCGRG 1 cut(s) 1091
Bsp1286I GDGCHC 5 cut(s) 229, 417, 1630, 1941, 3520
Bsp1720I GCTNAGC 3 cut(s) 122, 416, 812
Bsp19I CCATGG 2 cut(s) 184, 267
BspACI CCGC 4 cut(s) 933, 1433, 1745, 2950
BspANI GGCC 8 cut(s) 314, 797, 1162, 2261, 3120, 3152, 3484, 3588
BspFNI CGCG 2 cut(s) 1134, 2280
BspHI TCATGA 2 cut(s) 957, 1852
BspLI GGNNCC 5 cut(s) 640, 976, 1396, 1873, 3694
BspMAI CTGCAG 1 cut(s) 1036
BspPI GGATC 5 cut(s) 1335, 1441, 2369, 2960, 3167
BspT107I GGYRCC 1 cut(s) 1394
BspTNI GGTCTC 3 cut(s) 2531, 2933, 3043
BsrDI GCAATG 4 cut(s) 1398, 2311, 2760, 3470
BsrI ACTGG 7 cut(s) 200, 399, 453, 489, 1847, 2422, 2477
BssECI CCNNGG 5 cut(s) 18, 184, 267, 1091, 1942
BssT1I CCWWGG 2 cut(s) 184, 267
Bst2UI CCWGG 2 cut(s) 20, 422
Bst6I CTCTTC 2 cut(s) 1977, 3759
BstAPI GCANNNNNTGC 4 cut(s) 233, 1031, 1625, 3515
BstC8I GCNNGC 7 cut(s) 931, 1071, 1393, 1832, 2151, 3486, 3590
BstDSI CCRYGG 3 cut(s) 184, 267, 1942
BstFNI CGCG 2 cut(s) 1134, 2280
BstHHI GCGC 3 cut(s) 1000, 2282, 3554
BstMAI GTCTC 8 cut(s) 71, 2170, 2269, 2531, 2701, 2933, 3043, 3288
BstMCI CGRYCG 1 cut(s) 1951
BstNI CCWGG 2 cut(s) 20, 422
BstNSI RCATGY 4 cut(s) 1834, 2153, 2464, 2771
BstSCI CCNGG 5 cut(s) 18, 420, 1090, 1091, 1157
BstSFI CTRYAG 1 cut(s) 1032
BstSLI GKGCMC 1 cut(s) 3520
BstUI CGCG 2 cut(s) 1134, 2280
BstV2I GAAGAC 1 cut(s) 1006
BstX2I RGATCY 3 cut(s) 1327, 1446, 2965
BstXI CCANNNNNNTGG 2 cut(s) 428, 2519
BstYI RGATCY 3 cut(s) 1327, 1446, 2965
Bsu36I CCTNAGG 1 cut(s) 1346
BsuRI GGCC 8 cut(s) 314, 797, 1162, 2261, 3120, 3152, 3484, 3588
BtgI CCRYGG 3 cut(s) 184, 267, 1942
BtgZI GCGATG 1 cut(s) 1149
BtrI CACGTC 1 cut(s) 386
BtsI GCAGTG 4 cut(s) 417, 596, 915, 1240
Cac8I GCNNGC 7 cut(s) 931, 1071, 1393, 1832, 2151, 3486, 3590
CaiI CAGNNNCTG 4 cut(s) 1040, 1239, 2019, 2573
CciI TCATGA 2 cut(s) 957, 1852
CfoI GCGC 3 cut(s) 1000, 2282, 3554
Cfr13I GGNCC 3 cut(s) 1871, 3119, 3151
Cfr9I CCCGGG 1 cut(s) 1091
CseI GACGC 1 cut(s) 2286
Csp6I GTAC 6 cut(s) 307, 1251, 1507, 1535, 2785, 2864
CviQI GTAC 6 cut(s) 307, 1251, 1507, 1535, 2785, 2864
DriI GACNNNNNGTC 2 cut(s) 726, 2407
EaeI YGGCCR 1 cut(s) 795
Eam1104I CTCTTC 2 cut(s) 1977, 3759
Eam1105I GACNNNNNGTC 2 cut(s) 726, 2407
EarI CTCTTC 2 cut(s) 1977, 3759
Eco130I CCWWGG 2 cut(s) 184, 267
Eco147I AGGCCT 2 cut(s) 3484, 3588
Eco24I GRGCYC 1 cut(s) 1941
Eco31I GGTCTC 3 cut(s) 2531, 2933, 3043
Eco32I GATATC 4 cut(s) 209, 1955, 3398, 3652
Eco47I GGWCC 1 cut(s) 1871
Eco57I CTGAAG 3 cut(s) 1062, 1996, 3126
Eco81I CCTNAGG 1 cut(s) 1346
Eco88I CYCGRG 1 cut(s) 1091
EcoRII CCWGG 2 cut(s) 18, 420
EcoRV GATATC 4 cut(s) 209, 1955, 3398, 3652
EcoT14I CCWWGG 2 cut(s) 184, 267
EcoT22I ATGCAT 1 cut(s) 751
EcoT38I GRGCYC 1 cut(s) 1941
ErhI CCWWGG 2 cut(s) 184, 267
Esp3I CGTCTC 1 cut(s) 2269
FalI AAGNNNNNCTT 6 cut(s) 1650, 1682, 2087, 2119, 3096, 3128
FaqI GGGAC 2 cut(s) 178, 1857
FauNDI CATATG 1 cut(s) 725
FbaI TGATCA 2 cut(s) 465, 1056
FriOI GRGCYC 1 cut(s) 1941
FspBI CTAG 3 cut(s) 678, 1265, 3465
GlaI GCGC 3 cut(s) 999, 2281, 3553
GsuI CTGGAG 2 cut(s) 1566, 2494
HaeIII GGCC 8 cut(s) 314, 797, 1162, 2261, 3120, 3152, 3484, 3588
HapII CCGG 8 cut(s) 329, 471, 1001, 1092, 1159, 1786, 2404, 2978
HgaI GACGC 1 cut(s) 2286
HhaI GCGC 3 cut(s) 1000, 2282, 3554
Hin6I GCGC 3 cut(s) 998, 2280, 3552
HinP1I GCGC 3 cut(s) 998, 2280, 3552
HincII GTYRAC 1 cut(s) 2470
HindII GTYRAC 1 cut(s) 2470
HpaII CCGG 8 cut(s) 329, 471, 1001, 1092, 1159, 1786, 2404, 2978
HphI GGTGA 8 cut(s) 460, 1066, 1080, 1775, 1902, 2344, 3559, 3686
Hpy166II GTNNAC 8 cut(s) 7, 688, 1141, 1910, 2470, 2787, 2803, 2886
Hpy8I GTNNAC 8 cut(s) 7, 688, 1141, 1910, 2470, 2787, 2803, 2886
HpyCH4IV ACGT 3 cut(s) 101, 385, 2919
HpySE526I ACGT 3 cut(s) 101, 385, 2919
HspAI GCGC 3 cut(s) 998, 2280, 3552
Ksp22I TGATCA 2 cut(s) 465, 1056
LmnI GCTCC 8 cut(s) 243, 638, 974, 1361, 1788, 2700, 3128, 3287
LweI GCATC 9 cut(s) 341, 493, 1420, 1466, 1902, 2493, 2642, 3413, 3514
MaeI CTAG 3 cut(s) 678, 1265, 3465
MaeII ACGT 3 cut(s) 101, 385, 2919
MaeIII GTNAC 5 cut(s) 479, 865, 913, 1765, 3058
MflI RGATCY 3 cut(s) 1327, 1446, 2965
MhlI GDGCHC 5 cut(s) 229, 417, 1630, 1941, 3520
MlsI TGGCCA 1 cut(s) 797
MluNI TGGCCA 1 cut(s) 797
MlyI GAGTC 3 cut(s) 1628, 2615, 3695
MmeI TCCRAC 5 cut(s) 184, 675, 736, 823, 2230
Mox20I TGGCCA 1 cut(s) 797
Mph1103I ATGCAT 1 cut(s) 751
MroXI GAANNNNTTC 1 cut(s) 3074
MscI TGGCCA 1 cut(s) 797
MseI TTAA 6 cut(s) 252, 273, 449, 1728, 3036, 3090
MslI CAYNNNNRTG 3 cut(s) 2148, 2918, 3662
Msp20I TGGCCA 1 cut(s) 797
MspA1I CMGCKG 3 cut(s) 263, 674, 2570
MspI CCGG 8 cut(s) 329, 471, 1001, 1092, 1159, 1786, 2404, 2978
MspR9I CCNGG 5 cut(s) 20, 422, 1092, 1093, 1159
Mva1269I GAATGC 4 cut(s) 749, 858, 963, 2933
MvaI CCWGG 2 cut(s) 20, 422
MvnI CGCG 2 cut(s) 1134, 2280
NciI CCSGG 3 cut(s) 1092, 1093, 1159
NcoI CCATGG 2 cut(s) 184, 267
NdeI CATATG 1 cut(s) 725
NlaIV GGNNCC 5 cut(s) 640, 976, 1396, 1873, 3694
NmeAIII GCCGAG 1 cut(s) 746
NmuCI GTSAC 2 cut(s) 865, 913
NsiI ATGCAT 1 cut(s) 751
NspI RCATGY 4 cut(s) 1834, 2153, 2464, 2771
PaeI GCATGC 2 cut(s) 1834, 2153
PagI TCATGA 2 cut(s) 957, 1852
PceI AGGCCT 2 cut(s) 3484, 3588
PctI GAATGC 4 cut(s) 749, 858, 963, 2933
PdmI GAANNNNTTC 1 cut(s) 3074
PflMI CCANNNNNTGG 1 cut(s) 190
PleI GAGTC 3 cut(s) 1628, 2614, 3694
PpsI GAGTC 3 cut(s) 1628, 2614, 3694
PsiI TTATAA 1 cut(s) 3710
Psp1406I AACGTT 1 cut(s) 101
Psp6I CCWGG 2 cut(s) 18, 420
PspGI CCWGG 2 cut(s) 18, 420
PspN4I GGNNCC 5 cut(s) 640, 976, 1396, 1873, 3694
PspPI GGNCC 3 cut(s) 1871, 3119, 3151
PstI CTGCAG 1 cut(s) 1036
PstNI CAGNNNCTG 4 cut(s) 1040, 1239, 2019, 2573
PsuI RGATCY 3 cut(s) 1327, 1446, 2965
PvuII CAGCTG 3 cut(s) 263, 674, 2570
RsaI GTAC 6 cut(s) 308, 1252, 1508, 1536, 2786, 2865
RsaNI GTAC 6 cut(s) 307, 1251, 1507, 1535, 2785, 2864
RseI CAYNNNNRTG 3 cut(s) 2148, 2918, 3662
SaqAI TTAA 6 cut(s) 252, 273, 449, 1728, 3036, 3090
Sau96I GGNCC 3 cut(s) 1871, 3119, 3151
ScaI AGTACT 2 cut(s) 1252, 1508
SchI GAGTC 3 cut(s) 1628, 2615, 3695
ScrFI CCNGG 5 cut(s) 20, 422, 1092, 1093, 1159
SduI GDGCHC 5 cut(s) 229, 417, 1630, 1941, 3520
SfaNI GCATC 9 cut(s) 341, 493, 1420, 1466, 1902, 2493, 2642, 3413, 3514
SfcI CTRYAG 1 cut(s) 1032
SinI GGWCC 1 cut(s) 1871
SmaI CCCGGG 1 cut(s) 1093
SmiMI CAYNNNNRTG 3 cut(s) 2148, 2918, 3662
SmlI CTYRAG 2 cut(s) 1586, 2356
SmoI CTYRAG 2 cut(s) 1586, 2356
SpeI ACTAGT 1 cut(s) 1264
SphI GCATGC 2 cut(s) 1834, 2153
SseBI AGGCCT 2 cut(s) 3484, 3588
SsiI CCGC 4 cut(s) 933, 1433, 1745, 2950
SspI AATATT 2 cut(s) 250, 2174
SspMI CTAG 3 cut(s) 678, 1265, 3465
StuI AGGCCT 2 cut(s) 3484, 3588
StyD4I CCNGG 5 cut(s) 18, 420, 1090, 1091, 1157
StyI CCWWGG 2 cut(s) 184, 267
TaiI ACGT 3 cut(s) 104, 388, 2922
TaqI TCGA 4 cut(s) 438, 2816, 2937, 3684
TaqII GACCGA 1 cut(s) 1965
TatI WGTACW 3 cut(s) 1250, 1506, 1534
Tru1I TTAA 6 cut(s) 252, 273, 449, 1728, 3036, 3090
Tru9I TTAA 6 cut(s) 252, 273, 449, 1728, 3036, 3090
TseFI GTSAC 2 cut(s) 865, 913
Tsp45I GTSAC 2 cut(s) 865, 913
TspMI CCCGGG 1 cut(s) 1091
Van91I CCANNNNNTGG 1 cut(s) 190
VpaK11BI GGWCC 1 cut(s) 1871
XapI RAATTY 6 cut(s) 561, 1110, 1340, 1808, 3017, 3568
XceI RCATGY 4 cut(s) 1834, 2153, 2464, 2771
XcmI CCANNNNNNNNNTGG 2 cut(s) 2519, 3092
XmaI CCCGGG 1 cut(s) 1091
XmnI GAANNNNTTC 1 cut(s) 3074
XspI CTAG 3 cut(s) 678, 1265, 3465
ZrmI AGTACT 2 cut(s) 1252, 1508
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.