DNA-binding domain in plant proteins such as APETALA2 and EREBPs
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g27322 FvH4_3g27322 FvH4_4g11030 FvH4_4g11060 FvH4_4g11063 FvH4_4g11430 FvH4_5g27997 FvH4_5g28160 FvH4_5g28220 FvH4_5g28371 FvH4_6g25551 FvH4_6g25850 FvH4_c17g00081 FvH4_c17g00081 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 45 |
| AcsI | RAATTY | 2 cut(s) | 107, 165 |
| AfaI | GTAC | 2 cut(s) | 13, 29 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 44, 101 |
| AgeI | ACCGGT | 1 cut(s) | 30 |
| AgsI | TTSAA | 1 cut(s) | 170 |
| AluBI | AGCT | 1 cut(s) | 158 |
| AluI | AGCT | 1 cut(s) | 158 |
| Alw26I | GTCTC | 1 cut(s) | 170 |
| ApeKI | GCWGC | 1 cut(s) | 151 |
| ApoI | RAATTY | 2 cut(s) | 107, 165 |
| AsiGI | ACCGGT | 1 cut(s) | 30 |
| BbvI | GCAGC | 1 cut(s) | 138 |
| BccI | CCATC | 2 cut(s) | 81, 94 |
| BcoDI | GTCTC | 1 cut(s) | 170 |
| BfaI | CTAG | 1 cut(s) | 39 |
| BisI | GCNGC | 2 cut(s) | 46, 152 |
| BlsI | GCNGC | 2 cut(s) | 47, 153 |
| BmiI | GGNNCC | 2 cut(s) | 35, 93 |
| BsaI | GGTCTC | 1 cut(s) | 170 |
| BsaJI | CCNNGG | 1 cut(s) | 95 |
| BsaWI | WCCGGW | 1 cut(s) | 30 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 44, 101 |
| Bse118I | RCCGGY | 1 cut(s) | 30 |
| Bse3DI | GCAATG | 1 cut(s) | 68 |
| BseDI | CCNNGG | 1 cut(s) | 95 |
| BseGI | GGATG | 1 cut(s) | 105 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 44, 101 |
| BseMI | GCAATG | 1 cut(s) | 68 |
| BseRI | GAGGAG | 1 cut(s) | 75 |
| BseXI | GCAGC | 1 cut(s) | 138 |
| BshTI | ACCGGT | 1 cut(s) | 30 |
| BsiSI | CCGG | 1 cut(s) | 31 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 44, 101 |
| BsmAI | GTCTC | 1 cut(s) | 170 |
| Bso31I | GGTCTC | 1 cut(s) | 170 |
| BspACI | CCGC | 1 cut(s) | 45 |
| BspLI | GGNNCC | 2 cut(s) | 35, 93 |
| BspTNI | GGTCTC | 1 cut(s) | 170 |
| BsrDI | GCAATG | 1 cut(s) | 68 |
| BsrFI | RCCGGY | 1 cut(s) | 30 |
| BssAI | RCCGGY | 1 cut(s) | 30 |
| BssECI | CCNNGG | 1 cut(s) | 95 |
| BstC8I | GCNNGC | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 105 |
| BstMAI | GTCTC | 1 cut(s) | 170 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 180 |
| BstNSI | RCATGY | 1 cut(s) | 12 |
| BstV1I | GCAGC | 1 cut(s) | 138 |
| BtsCI | GGATG | 1 cut(s) | 105 |
| Cac8I | GCNNGC | 1 cut(s) | 156 |
| Cfr10I | RCCGGY | 1 cut(s) | 30 |
| Csp6I | GTAC | 2 cut(s) | 12, 28 |
| CspAI | ACCGGT | 1 cut(s) | 30 |
| CviAII | CATG | 1 cut(s) | 9 |
| CviJI | RGCY | 3 cut(s) | 48, 94, 158 |
| CviKI_1 | RGCY | 3 cut(s) | 48, 94, 158 |
| CviQI | GTAC | 2 cut(s) | 12, 28 |
| Eco31I | GGTCTC | 1 cut(s) | 170 |
| Eco32I | GATATC | 1 cut(s) | 136 |
| EcoRV | GATATC | 1 cut(s) | 136 |
| FaeI | CATG | 1 cut(s) | 12 |
| FaiI | YATR | 4 cut(s) | 10, 57, 75, 217 |
| FatI | CATG | 1 cut(s) | 8 |
| Fnu4HI | GCNGC | 2 cut(s) | 46, 152 |
| FokI | GGATG | 1 cut(s) | 112 |
| Fsp4HI | GCNGC | 2 cut(s) | 46, 152 |
| FspBI | CTAG | 1 cut(s) | 39 |
| GluI | GCNGC | 2 cut(s) | 46, 152 |
| HapII | CCGG | 1 cut(s) | 31 |
| Hin1II | CATG | 1 cut(s) | 12 |
| HpaII | CCGG | 1 cut(s) | 31 |
| Hpy188I | TCNGA | 2 cut(s) | 99, 162 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 73, 154 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 180 |
| Hsp92II | CATG | 1 cut(s) | 12 |
| LmnI | GCTCC | 1 cut(s) | 91 |
| LpnPI | CCDG | 2 cut(s) | 44, 193 |
| Lsp1109I | GCAGC | 1 cut(s) | 138 |
| MaeI | CTAG | 1 cut(s) | 39 |
| MluCI | AATT | 2 cut(s) | 107, 165 |
| MnlI | CCTC | 3 cut(s) | 35, 53, 105 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| MspI | CCGG | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 180 |
| NlaIII | CATG | 1 cut(s) | 12 |
| NlaIV | GGNNCC | 2 cut(s) | 35, 93 |
| NspI | RCATGY | 1 cut(s) | 12 |
| PinAI | ACCGGT | 1 cut(s) | 30 |
| PkrI | GCNGC | 2 cut(s) | 47, 153 |
| PspN4I | GGNNCC | 2 cut(s) | 35, 93 |
| RsaI | GTAC | 2 cut(s) | 13, 29 |
| RsaNI | GTAC | 2 cut(s) | 12, 28 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| SatI | GCNGC | 2 cut(s) | 46, 152 |
| SetI | ASST | 1 cut(s) | 160 |
| SgeI | CNNG | 7 cut(s) | 21, 43, 51, 108, 167, 187, 192 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| Sse9I | AATT | 2 cut(s) | 107, 165 |
| SsiI | CCGC | 1 cut(s) | 45 |
| SspMI | CTAG | 1 cut(s) | 39 |
| TasI | AATT | 2 cut(s) | 107, 165 |
| TatI | WGTACW | 1 cut(s) | 11 |
| TauI | GCSGC | 1 cut(s) | 48 |
| TseI | GCWGC | 1 cut(s) | 151 |
| XapI | RAATTY | 2 cut(s) | 107, 165 |
| XceI | RCATGY | 1 cut(s) | 12 |
| XspI | CTAG | 1 cut(s) | 39 |