Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATMG00513 |
| fragaria_vesca | FvH4_6g34420 FvH4_c1g00470 |
| malus_domestica | MD13G1126900.v1.1 |
| pyrus_communis | pycom12401g00270 pycom17g12740 |
| rosa_chinensis | RchiOBHm_MTg0498221 |
| rosa_laevigata | RLG00000000086 RLG00000000118 RLG00000000360 RLG00000000372 RLG00000000388 |
| rosa_wichuraiana | Rw0G023320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 710 |
| Acc36I | ACCTGC | 1 cut(s) | 875 |
| AccI | GTMKAC | 2 cut(s) | 405, 1064 |
| AccII | CGCG | 1 cut(s) | 854 |
| AciI | CCGC | 4 cut(s) | 152, 588, 719, 807 |
| AclWI | GGATC | 2 cut(s) | 143, 156 |
| AcoI | YGGCCR | 2 cut(s) | 1218, 1269 |
| AcsI | RAATTY | 2 cut(s) | 445, 1168 |
| AcuI | CTGAAG | 1 cut(s) | 287 |
| AcyI | GRCGYC | 1 cut(s) | 707 |
| AfaI | GTAC | 1 cut(s) | 1161 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 247, 670, 1074 |
| AflIII | ACRYGT | 1 cut(s) | 852 |
| AgsI | TTSAA | 7 cut(s) | 233, 398, 414, 659, 771, 862, 1230 |
| AjnI | CCWGG | 2 cut(s) | 240, 367 |
| Alw21I | GWGCWC | 3 cut(s) | 42, 647, 1050 |
| Alw26I | GTCTC | 3 cut(s) | 1108, 1176, 1256 |
| AlwI | GGATC | 2 cut(s) | 143, 156 |
| Ama87I | CYCGRG | 1 cut(s) | 1244 |
| AoxI | GGCC | 3 cut(s) | 379, 1218, 1269 |
| ApeKI | GCWGC | 3 cut(s) | 317, 602, 984 |
| ApoI | RAATTY | 2 cut(s) | 445, 1168 |
| AspLEI | GCGC | 1 cut(s) | 1207 |
| AspS9I | GGNCC | 3 cut(s) | 60, 379, 572 |
| AsuHPI | GGTGA | 5 cut(s) | 3, 223, 362, 546, 904 |
| AvaI | CYCGRG | 1 cut(s) | 1244 |
| AvaII | GGWCC | 2 cut(s) | 60, 572 |
| BaeGI | GKGCMC | 1 cut(s) | 439 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 567, 600 |
| BalI | TGGCCA | 2 cut(s) | 1220, 1271 |
| BamHI | GGATCC | 1 cut(s) | 148 |
| BanII | GRGCYC | 2 cut(s) | 42, 1050 |
| BauI | CACGAG | 1 cut(s) | 426 |
| Bbv12I | GWGCWC | 3 cut(s) | 42, 647, 1050 |
| BbvI | GCAGC | 3 cut(s) | 329, 614, 996 |
| BccI | CCATC | 3 cut(s) | 240, 925, 1076 |
| BceAI | ACGGC | 2 cut(s) | 366, 687 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 143, 177 |
| BciT130I | CCWGG | 2 cut(s) | 242, 369 |
| BciVI | GTATCC | 2 cut(s) | 595, 1256 |
| BcoDI | GTCTC | 3 cut(s) | 1108, 1176, 1256 |
| BfaI | CTAG | 2 cut(s) | 432, 1157 |
| BfmI | CTRYAG | 1 cut(s) | 693 |
| BfuAI | ACCTGC | 1 cut(s) | 875 |
| BfuI | GTATCC | 2 cut(s) | 595, 1256 |
| BisI | GCNGC | 5 cut(s) | 318, 603, 720, 808, 985 |
| BlsI | GCNGC | 5 cut(s) | 319, 604, 721, 809, 986 |
| Bme1390I | CCNGG | 2 cut(s) | 242, 369 |
| Bme18I | GGWCC | 2 cut(s) | 60, 572 |
| BmeT110I | CYCGRG | 1 cut(s) | 1244 |
| BmgT120I | GGNCC | 3 cut(s) | 60, 379, 572 |
| BmiI | GGNNCC | 3 cut(s) | 150, 573, 574 |
| BmrFI | CCNGG | 2 cut(s) | 242, 369 |
| BmsI | GCATC | 4 cut(s) | 550, 819, 963, 1192 |
| BpmI | CTGGAG | 2 cut(s) | 237, 564 |
| BsaHI | GRCGYC | 1 cut(s) | 707 |
| BsaJI | CCNNGG | 3 cut(s) | 144, 241, 368 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 247, 670, 1074 |
| Bse1I | ACTGG | 4 cut(s) | 220, 581, 733, 1021 |
| Bse3DI | GCAATG | 1 cut(s) | 22 |
| BseBI | CCWGG | 2 cut(s) | 242, 369 |
| BseDI | CCNNGG | 3 cut(s) | 144, 241, 368 |
| BseGI | GGATG | 3 cut(s) | 98, 251, 916 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 247, 670, 1074 |
| BseMI | GCAATG | 1 cut(s) | 22 |
| BseMII | CTCAG | 1 cut(s) | 869 |
| BseNI | ACTGG | 4 cut(s) | 220, 581, 733, 1021 |
| BseRI | GAGGAG | 1 cut(s) | 937 |
| BseSI | GKGCMC | 1 cut(s) | 439 |
| BseXI | GCAGC | 3 cut(s) | 329, 614, 996 |
| BsgI | GTGCAG | 2 cut(s) | 513, 903 |
| Bsh1236I | CGCG | 1 cut(s) | 854 |
| Bsh1285I | CGRYCG | 1 cut(s) | 75 |
| BshFI | GGCC | 3 cut(s) | 381, 1220, 1271 |
| BsiEI | CGRYCG | 1 cut(s) | 75 |
| BsiHKAI | GWGCWC | 3 cut(s) | 42, 647, 1050 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1244 |
| BslFI | GGGAC | 1 cut(s) | 558 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 247, 670, 1074 |
| BsmAI | GTCTC | 3 cut(s) | 1108, 1176, 1256 |
| BsmFI | GGGAC | 1 cut(s) | 558 |
| BsnI | GGCC | 3 cut(s) | 381, 1220, 1271 |
| BsoBI | CYCGRG | 1 cut(s) | 1244 |
| Bsp1286I | GDGCHC | 4 cut(s) | 42, 439, 647, 1050 |
| Bsp143I | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| BspACI | CCGC | 4 cut(s) | 152, 588, 719, 807 |
| BspANI | GGCC | 3 cut(s) | 381, 1220, 1271 |
| BspCNI | CTCAG | 1 cut(s) | 870 |
| BspFNI | CGCG | 1 cut(s) | 854 |
| BspHI | TCATGA | 1 cut(s) | 1198 |
| BspLI | GGNNCC | 3 cut(s) | 150, 573, 574 |
| BspMAI | CTGCAG | 1 cut(s) | 697 |
| BspMI | ACCTGC | 1 cut(s) | 875 |
| BspPI | GGATC | 2 cut(s) | 143, 156 |
| BsrDI | GCAATG | 1 cut(s) | 22 |
| BsrI | ACTGG | 4 cut(s) | 220, 581, 733, 1021 |
| BssECI | CCNNGG | 3 cut(s) | 144, 241, 368 |
| BssMI | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| BssNAI | GTATAC | 1 cut(s) | 1065 |
| BssNI | GRCGYC | 1 cut(s) | 707 |
| BssSI | CACGAG | 1 cut(s) | 426 |
| Bst1107I | GTATAC | 1 cut(s) | 1065 |
| Bst2BI | CACGAG | 1 cut(s) | 426 |
| Bst2UI | CCWGG | 2 cut(s) | 242, 369 |
| Bst4CI | ACNGT | 2 cut(s) | 76, 403 |
| Bst6I | CTCTTC | 1 cut(s) | 234 |
| BstACI | GRCGYC | 1 cut(s) | 707 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 922 |
| BstC8I | GCNNGC | 6 cut(s) | 29, 42, 622, 805, 942, 1050 |
| BstDEI | CTNAG | 3 cut(s) | 878, 1042, 1059 |
| BstEII | GGTNACC | 1 cut(s) | 552 |
| BstF5I | GGATG | 3 cut(s) | 98, 251, 916 |
| BstFNI | CGCG | 1 cut(s) | 854 |
| BstHHI | GCGC | 1 cut(s) | 1207 |
| BstKTI | GATC | 4 cut(s) | 151, 748, 798, 1041 |
| BstMAI | GTCTC | 3 cut(s) | 1108, 1176, 1256 |
| BstMBI | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| BstMCI | CGRYCG | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 37, 50, 314, 326, 922 |
| BstNI | CCWGG | 2 cut(s) | 242, 369 |
| BstNSI | RCATGY | 1 cut(s) | 31 |
| BstPI | GGTNACC | 1 cut(s) | 552 |
| BstSCI | CCNGG | 2 cut(s) | 240, 367 |
| BstSFI | CTRYAG | 1 cut(s) | 693 |
| BstSLI | GKGCMC | 1 cut(s) | 439 |
| BstUI | CGCG | 1 cut(s) | 854 |
| BstV1I | GCAGC | 3 cut(s) | 329, 614, 996 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1216 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| BstZ17I | GTATAC | 1 cut(s) | 1065 |
| BsuI | GTATCC | 2 cut(s) | 595, 1256 |
| BsuRI | GGCC | 3 cut(s) | 381, 1220, 1271 |
| BtsCI | GGATG | 3 cut(s) | 98, 251, 916 |
| BtsIMutI | CAGTG | 2 cut(s) | 726, 1078 |
| BveI | ACCTGC | 1 cut(s) | 875 |
| Cac8I | GCNNGC | 6 cut(s) | 29, 42, 622, 805, 942, 1050 |
| CciI | TCATGA | 1 cut(s) | 1198 |
| CfoI | GCGC | 1 cut(s) | 1207 |
| Cfr13I | GGNCC | 3 cut(s) | 60, 379, 572 |
| CseI | GACGC | 1 cut(s) | 820 |
| Csp6I | GTAC | 1 cut(s) | 1160 |
| CviAII | CATG | 7 cut(s) | 28, 599, 899, 904, 970, 979, 1199 |
| CviQI | GTAC | 1 cut(s) | 1160 |
| DdeI | CTNAG | 3 cut(s) | 878, 1042, 1059 |
| DpnI | GATC | 4 cut(s) | 150, 747, 797, 1040 |
| DpnII | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| EaeI | YGGCCR | 2 cut(s) | 1218, 1269 |
| Eam1104I | CTCTTC | 1 cut(s) | 234 |
| EarI | CTCTTC | 1 cut(s) | 234 |
| Ecl136II | GAGCTC | 2 cut(s) | 40, 1048 |
| Eco24I | GRGCYC | 2 cut(s) | 42, 1050 |
| Eco47I | GGWCC | 2 cut(s) | 60, 572 |
| Eco53kI | GAGCTC | 2 cut(s) | 40, 1048 |
| Eco57I | CTGAAG | 1 cut(s) | 287 |
| Eco88I | CYCGRG | 1 cut(s) | 1244 |
| Eco91I | GGTNACC | 1 cut(s) | 552 |
| EcoICRI | GAGCTC | 2 cut(s) | 40, 1048 |
| EcoO109I | RGGNCCY | 1 cut(s) | 572 |
| EcoO65I | GGTNACC | 1 cut(s) | 552 |
| EcoRII | CCWGG | 2 cut(s) | 240, 367 |
| EcoT38I | GRGCYC | 2 cut(s) | 42, 1050 |
| FaeI | CATG | 7 cut(s) | 31, 602, 902, 907, 973, 982, 1202 |
| FaqI | GGGAC | 1 cut(s) | 558 |
| FatI | CATG | 7 cut(s) | 27, 598, 898, 903, 969, 978, 1198 |
| FblI | GTMKAC | 2 cut(s) | 405, 1064 |
| Fnu4HI | GCNGC | 5 cut(s) | 318, 603, 720, 808, 985 |
| FokI | GGATG | 3 cut(s) | 85, 258, 923 |
| FriOI | GRGCYC | 2 cut(s) | 42, 1050 |
| Fsp4HI | GCNGC | 5 cut(s) | 318, 603, 720, 808, 985 |
| FspBI | CTAG | 2 cut(s) | 432, 1157 |
| GlaI | GCGC | 1 cut(s) | 1206 |
| GluI | GCNGC | 5 cut(s) | 318, 603, 720, 808, 985 |
| GsuI | CTGGAG | 2 cut(s) | 237, 564 |
| HaeIII | GGCC | 3 cut(s) | 381, 1220, 1271 |
| HgaI | GACGC | 1 cut(s) | 820 |
| HhaI | GCGC | 1 cut(s) | 1207 |
| Hin1I | GRCGYC | 1 cut(s) | 707 |
| Hin1II | CATG | 7 cut(s) | 31, 602, 902, 907, 973, 982, 1202 |
| Hin6I | GCGC | 1 cut(s) | 1205 |
| HinP1I | GCGC | 1 cut(s) | 1205 |
| HinfI | GANTC | 7 cut(s) | 48, 65, 595, 847, 895, 1002, 1249 |
| HphI | GGTGA | 5 cut(s) | 3, 223, 362, 546, 904 |
| Hpy166II | GTNNAC | 5 cut(s) | 11, 294, 406, 1065, 1139 |
| Hpy188I | TCNGA | 3 cut(s) | 64, 145, 910 |
| Hpy188III | TCNNGA | 3 cut(s) | 877, 1199, 1246 |
| Hpy8I | GTNNAC | 5 cut(s) | 11, 294, 406, 1065, 1139 |
| Hpy99I | CGWCG | 1 cut(s) | 709 |
| HpyAV | CCTTC | 1 cut(s) | 1236 |
| HpyCH4III | ACNGT | 2 cut(s) | 76, 403 |
| HpyCH4IV | ACGT | 1 cut(s) | 707 |
| HpyCH4V | TGCA | 9 cut(s) | 27, 31, 462, 530, 544, 602, 695, 777, 884 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 37, 50, 314, 326, 922 |
| HpyF3I | CTNAG | 3 cut(s) | 878, 1042, 1059 |
| HpySE526I | ACGT | 1 cut(s) | 707 |
| Hsp92I | GRCGYC | 1 cut(s) | 707 |
| Hsp92II | CATG | 7 cut(s) | 31, 602, 902, 907, 973, 982, 1202 |
| HspAI | GCGC | 1 cut(s) | 1205 |
| KflI | GGGWCCC | 1 cut(s) | 572 |
| Kzo9I | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| LmnI | GCTCC | 3 cut(s) | 37, 370, 698 |
| Lsp1109I | GCAGC | 3 cut(s) | 329, 614, 996 |
| LweI | GCATC | 4 cut(s) | 550, 819, 963, 1192 |
| MaeI | CTAG | 2 cut(s) | 432, 1157 |
| MaeII | ACGT | 1 cut(s) | 707 |
| MaeIII | GTNAC | 4 cut(s) | 94, 211, 552, 613 |
| MalI | GATC | 4 cut(s) | 150, 747, 797, 1040 |
| MboI | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| MboII | GAAGA | 1 cut(s) | 221 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MhlI | GDGCHC | 4 cut(s) | 42, 439, 647, 1050 |
| MlsI | TGGCCA | 2 cut(s) | 1220, 1271 |
| MluCI | AATT | 8 cut(s) | 55, 87, 233, 279, 445, 782, 996, 1168 |
| MluI | ACGCGT | 1 cut(s) | 852 |
| MluNI | TGGCCA | 2 cut(s) | 1220, 1271 |
| MlyI | GAGTC | 2 cut(s) | 59, 1258 |
| MmeI | TCCRAC | 2 cut(s) | 87, 888 |
| MnlI | CCTC | 8 cut(s) | 139, 171, 244, 562, 747, 929, 955, 958 |
| Mox20I | TGGCCA | 2 cut(s) | 1220, 1271 |
| MscI | TGGCCA | 2 cut(s) | 1220, 1271 |
| MseI | TTAA | 4 cut(s) | 86, 278, 474, 842 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1214 |
| Msp20I | TGGCCA | 2 cut(s) | 1220, 1271 |
| MspA1I | CMGCKG | 1 cut(s) | 620 |
| MspR9I | CCNGG | 2 cut(s) | 242, 369 |
| MvaI | CCWGG | 2 cut(s) | 242, 369 |
| MvnI | CGCG | 1 cut(s) | 854 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 37, 50, 314, 326, 922 |
| NdeII | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| NlaIII | CATG | 7 cut(s) | 31, 602, 902, 907, 973, 982, 1202 |
| NlaIV | GGNNCC | 3 cut(s) | 150, 573, 574 |
| NmuCI | GTSAC | 2 cut(s) | 211, 552 |
| NspI | RCATGY | 1 cut(s) | 31 |
| PaeI | GCATGC | 1 cut(s) | 31 |
| PagI | TCATGA | 1 cut(s) | 1198 |
| PfeI | GAWTC | 5 cut(s) | 48, 595, 847, 895, 1002 |
| PkrI | GCNGC | 5 cut(s) | 319, 604, 721, 809, 986 |
| PleI | GAGTC | 2 cut(s) | 59, 1257 |
| PpsI | GAGTC | 2 cut(s) | 59, 1257 |
| PpuMI | RGGWCCY | 1 cut(s) | 572 |
| Psp124BI | GAGCTC | 2 cut(s) | 42, 1050 |
| Psp5II | RGGWCCY | 1 cut(s) | 572 |
| Psp6I | CCWGG | 2 cut(s) | 240, 367 |
| PspEI | GGTNACC | 1 cut(s) | 552 |
| PspGI | CCWGG | 2 cut(s) | 240, 367 |
| PspN4I | GGNNCC | 3 cut(s) | 150, 573, 574 |
| PspPI | GGNCC | 3 cut(s) | 60, 379, 572 |
| PspPPI | RGGWCCY | 1 cut(s) | 572 |
| PstI | CTGCAG | 1 cut(s) | 697 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| PvuII | CAGCTG | 1 cut(s) | 620 |
| RsaI | GTAC | 1 cut(s) | 1161 |
| RsaNI | GTAC | 1 cut(s) | 1160 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1214 |
| SacI | GAGCTC | 2 cut(s) | 42, 1050 |
| SaqAI | TTAA | 4 cut(s) | 86, 278, 474, 842 |
| SatI | GCNGC | 5 cut(s) | 318, 603, 720, 808, 985 |
| Sau3AI | GATC | 4 cut(s) | 148, 745, 795, 1038 |
| Sau96I | GGNCC | 3 cut(s) | 60, 379, 572 |
| SchI | GAGTC | 2 cut(s) | 59, 1258 |
| ScrFI | CCNGG | 2 cut(s) | 242, 369 |
| SduI | GDGCHC | 4 cut(s) | 42, 439, 647, 1050 |
| SfaNI | GCATC | 4 cut(s) | 550, 819, 963, 1192 |
| SfcI | CTRYAG | 1 cut(s) | 693 |
| SinI | GGWCC | 2 cut(s) | 60, 572 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1214 |
| SphI | GCATGC | 1 cut(s) | 31 |
| Sse9I | AATT | 8 cut(s) | 55, 87, 233, 279, 445, 782, 996, 1168 |
| SsiI | CCGC | 4 cut(s) | 152, 588, 719, 807 |
| SspI | AATATT | 1 cut(s) | 735 |
| SspMI | CTAG | 2 cut(s) | 432, 1157 |
| SstI | GAGCTC | 2 cut(s) | 42, 1050 |
| StyD4I | CCNGG | 2 cut(s) | 240, 367 |
| TaaI | ACNGT | 2 cut(s) | 76, 403 |
| TaiI | ACGT | 1 cut(s) | 710 |
| TaqI | TCGA | 4 cut(s) | 46, 163, 343, 593 |
| TasI | AATT | 8 cut(s) | 55, 87, 233, 279, 445, 782, 996, 1168 |
| TauI | GCSGC | 2 cut(s) | 722, 810 |
| TfiI | GAWTC | 5 cut(s) | 48, 595, 847, 895, 1002 |
| Tru1I | TTAA | 4 cut(s) | 86, 278, 474, 842 |
| Tru9I | TTAA | 4 cut(s) | 86, 278, 474, 842 |
| TscAI | CASTG | 2 cut(s) | 733, 1078 |
| TseFI | GTSAC | 2 cut(s) | 211, 552 |
| TseI | GCWGC | 3 cut(s) | 317, 602, 984 |
| Tsp45I | GTSAC | 2 cut(s) | 211, 552 |
| TspDTI | ATGAA | 7 cut(s) | 107, 258, 272, 587, 860, 887, 1161 |
| TspRI | CASTG | 2 cut(s) | 733, 1078 |
| VpaK11BI | GGWCC | 2 cut(s) | 60, 572 |
| XapI | RAATTY | 2 cut(s) | 445, 1168 |
| XceI | RCATGY | 1 cut(s) | 31 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 109, 976 |
| XmiI | GTMKAC | 2 cut(s) | 405, 1064 |
| XspI | CTAG | 2 cut(s) | 432, 1157 |
| ZraI | GACGTC | 1 cut(s) | 708 |