Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATMG00513 |
| fragaria_vesca | FvH4_6g34420 FvH4_c1g00470 |
| malus_domestica | MD13G1126900.v1.1 |
| pyrus_communis | pycom12401g00270 pycom17g12740 |
| rosa_chinensis | RchiOBHm_MTg0498221 |
| rosa_laevigata | RLG00000000086 RLG00000000118 RLG00000000360 RLG00000000372 RLG00000000388 |
| rosa_wichuraiana | Rw0G023320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 869 |
| Acc36I | ACCTGC | 2 cut(s) | 38, 1034 |
| AccI | GTMKAC | 2 cut(s) | 564, 1223 |
| AccII | CGCG | 1 cut(s) | 1013 |
| AciI | CCGC | 6 cut(s) | 84, 311, 747, 878, 966, 1084 |
| AclWI | GGATC | 4 cut(s) | 79, 200, 302, 315 |
| AcoI | YGGCCR | 2 cut(s) | 1377, 1428 |
| AcsI | RAATTY | 2 cut(s) | 604, 1327 |
| AcuI | CTGAAG | 1 cut(s) | 446 |
| AcyI | GRCGYC | 1 cut(s) | 866 |
| AdeI | CACNNNGTG | 1 cut(s) | 102 |
| AfaI | GTAC | 1 cut(s) | 1320 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 32, 406, 829, 1233 |
| AflIII | ACRYGT | 1 cut(s) | 1011 |
| AgsI | TTSAA | 7 cut(s) | 392, 557, 573, 818, 930, 1021, 1389 |
| AjnI | CCWGG | 1 cut(s) | 526 |
| Alw21I | GWGCWC | 2 cut(s) | 806, 1209 |
| Alw26I | GTCTC | 3 cut(s) | 1267, 1335, 1415 |
| AlwI | GGATC | 4 cut(s) | 79, 200, 302, 315 |
| Ama87I | CYCGRG | 1 cut(s) | 1403 |
| AoxI | GGCC | 3 cut(s) | 538, 1377, 1428 |
| ApeKI | GCWGC | 3 cut(s) | 476, 761, 1143 |
| ApoI | RAATTY | 2 cut(s) | 604, 1327 |
| AspA2I | CCTAGG | 1 cut(s) | 400 |
| AspLEI | GCGC | 1 cut(s) | 1366 |
| AspS9I | GGNCC | 2 cut(s) | 538, 731 |
| AsuC2I | CCSGG | 1 cut(s) | 156 |
| AsuHPI | GGTGA | 4 cut(s) | 382, 521, 705, 1063 |
| AvaI | CYCGRG | 1 cut(s) | 1403 |
| AvaII | GGWCC | 1 cut(s) | 731 |
| AvrII | CCTAGG | 1 cut(s) | 400 |
| BaeGI | GKGCMC | 1 cut(s) | 598 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 726, 759 |
| BalI | TGGCCA | 2 cut(s) | 1379, 1430 |
| BamHI | GGATCC | 1 cut(s) | 307 |
| BanII | GRGCYC | 1 cut(s) | 1209 |
| BauI | CACGAG | 1 cut(s) | 585 |
| Bbv12I | GWGCWC | 2 cut(s) | 806, 1209 |
| BbvI | GCAGC | 3 cut(s) | 488, 773, 1155 |
| BccI | CCATC | 3 cut(s) | 399, 1084, 1235 |
| BceAI | ACGGC | 2 cut(s) | 525, 846 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 302, 336 |
| BciT130I | CCWGG | 1 cut(s) | 528 |
| BciVI | GTATCC | 2 cut(s) | 754, 1415 |
| BcnI | CCSGG | 1 cut(s) | 156 |
| BcoDI | GTCTC | 3 cut(s) | 1267, 1335, 1415 |
| BfaI | CTAG | 5 cut(s) | 68, 162, 401, 591, 1316 |
| BfmI | CTRYAG | 1 cut(s) | 852 |
| BfuAI | ACCTGC | 2 cut(s) | 38, 1034 |
| BfuI | GTATCC | 2 cut(s) | 754, 1415 |
| BisI | GCNGC | 5 cut(s) | 477, 762, 879, 967, 1144 |
| BlnI | CCTAGG | 1 cut(s) | 400 |
| BlsI | GCNGC | 5 cut(s) | 478, 763, 880, 968, 1145 |
| Bme1390I | CCNGG | 2 cut(s) | 156, 528 |
| Bme18I | GGWCC | 1 cut(s) | 731 |
| BmeT110I | CYCGRG | 1 cut(s) | 1403 |
| BmgT120I | GGNCC | 2 cut(s) | 538, 731 |
| BmiI | GGNNCC | 4 cut(s) | 82, 309, 732, 733 |
| BmrFI | CCNGG | 2 cut(s) | 156, 528 |
| BmsI | GCATC | 5 cut(s) | 202, 709, 978, 1122, 1351 |
| BpmI | CTGGAG | 2 cut(s) | 396, 723 |
| BpuMI | CCSGG | 1 cut(s) | 156 |
| BsaAI | YACGTR | 1 cut(s) | 102 |
| BsaHI | GRCGYC | 1 cut(s) | 866 |
| BsaJI | CCNNGG | 4 cut(s) | 188, 303, 400, 527 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 32, 406, 829, 1233 |
| Bse1I | ACTGG | 4 cut(s) | 379, 740, 892, 1180 |
| BseBI | CCWGG | 1 cut(s) | 528 |
| BseDI | CCNNGG | 4 cut(s) | 188, 303, 400, 527 |
| BseGI | GGATG | 3 cut(s) | 257, 410, 1075 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 32, 406, 829, 1233 |
| BseMII | CTCAG | 1 cut(s) | 1028 |
| BseNI | ACTGG | 4 cut(s) | 379, 740, 892, 1180 |
| BseRI | GAGGAG | 1 cut(s) | 1096 |
| BseSI | GKGCMC | 1 cut(s) | 598 |
| BseXI | GCAGC | 3 cut(s) | 488, 773, 1155 |
| BsgI | GTGCAG | 2 cut(s) | 672, 1062 |
| Bsh1236I | CGCG | 1 cut(s) | 1013 |
| BshFI | GGCC | 3 cut(s) | 540, 1379, 1430 |
| BsiHKAI | GWGCWC | 2 cut(s) | 806, 1209 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1403 |
| BsiSI | CCGG | 1 cut(s) | 155 |
| BslFI | GGGAC | 1 cut(s) | 717 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 32, 406, 829, 1233 |
| BsmAI | GTCTC | 3 cut(s) | 1267, 1335, 1415 |
| BsmFI | GGGAC | 1 cut(s) | 717 |
| BsnI | GGCC | 3 cut(s) | 540, 1379, 1430 |
| BsoBI | CYCGRG | 1 cut(s) | 1403 |
| Bsp1286I | GDGCHC | 3 cut(s) | 598, 806, 1209 |
| Bsp143I | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| Bsp19I | CCATGG | 1 cut(s) | 188 |
| BspACI | CCGC | 6 cut(s) | 84, 311, 747, 878, 966, 1084 |
| BspANI | GGCC | 3 cut(s) | 540, 1379, 1430 |
| BspCNI | CTCAG | 1 cut(s) | 1029 |
| BspFNI | CGCG | 1 cut(s) | 1013 |
| BspHI | TCATGA | 1 cut(s) | 1357 |
| BspLI | GGNNCC | 4 cut(s) | 82, 309, 732, 733 |
| BspMAI | CTGCAG | 1 cut(s) | 856 |
| BspMI | ACCTGC | 2 cut(s) | 38, 1034 |
| BspPI | GGATC | 4 cut(s) | 79, 200, 302, 315 |
| BsrI | ACTGG | 4 cut(s) | 379, 740, 892, 1180 |
| BssECI | CCNNGG | 4 cut(s) | 188, 303, 400, 527 |
| BssMI | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| BssNAI | GTATAC | 1 cut(s) | 1224 |
| BssNI | GRCGYC | 1 cut(s) | 866 |
| BssSI | CACGAG | 1 cut(s) | 585 |
| BssT1I | CCWWGG | 2 cut(s) | 188, 400 |
| Bst1107I | GTATAC | 1 cut(s) | 1224 |
| Bst2BI | CACGAG | 1 cut(s) | 585 |
| Bst2UI | CCWGG | 1 cut(s) | 528 |
| Bst4CI | ACNGT | 1 cut(s) | 562 |
| Bst6I | CTCTTC | 2 cut(s) | 121, 393 |
| BstACI | GRCGYC | 1 cut(s) | 866 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1081 |
| BstBAI | YACGTR | 1 cut(s) | 102 |
| BstC8I | GCNNGC | 5 cut(s) | 169, 781, 964, 1101, 1209 |
| BstDEI | CTNAG | 4 cut(s) | 176, 1037, 1201, 1218 |
| BstDSI | CCRYGG | 1 cut(s) | 188 |
| BstEII | GGTNACC | 1 cut(s) | 711 |
| BstF5I | GGATG | 3 cut(s) | 257, 410, 1075 |
| BstFNI | CGCG | 1 cut(s) | 1013 |
| BstHHI | GCGC | 1 cut(s) | 1366 |
| BstKTI | GATC | 7 cut(s) | 74, 123, 195, 310, 907, 957, 1200 |
| BstMAI | GTCTC | 3 cut(s) | 1267, 1335, 1415 |
| BstMBI | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 158, 231, 473, 485, 1081 |
| BstNI | CCWGG | 1 cut(s) | 528 |
| BstPI | GGTNACC | 1 cut(s) | 711 |
| BstSCI | CCNGG | 2 cut(s) | 154, 526 |
| BstSFI | CTRYAG | 1 cut(s) | 852 |
| BstSLI | GKGCMC | 1 cut(s) | 598 |
| BstUI | CGCG | 1 cut(s) | 1013 |
| BstV1I | GCAGC | 3 cut(s) | 488, 773, 1155 |
| BstX2I | RGATCY | 2 cut(s) | 192, 307 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1375 |
| BstYI | RGATCY | 2 cut(s) | 192, 307 |
| BstZ17I | GTATAC | 1 cut(s) | 1224 |
| BsuI | GTATCC | 2 cut(s) | 754, 1415 |
| BsuRI | GGCC | 3 cut(s) | 540, 1379, 1430 |
| BtgI | CCRYGG | 1 cut(s) | 188 |
| BtsCI | GGATG | 3 cut(s) | 257, 410, 1075 |
| BtsIMutI | CAGTG | 2 cut(s) | 885, 1237 |
| BveI | ACCTGC | 2 cut(s) | 38, 1034 |
| Cac8I | GCNNGC | 5 cut(s) | 169, 781, 964, 1101, 1209 |
| CciI | TCATGA | 1 cut(s) | 1357 |
| CfoI | GCGC | 1 cut(s) | 1366 |
| Cfr13I | GGNCC | 2 cut(s) | 538, 731 |
| CseI | GACGC | 1 cut(s) | 979 |
| Csp6I | GTAC | 1 cut(s) | 1319 |
| CviAII | CATG | 7 cut(s) | 189, 758, 1058, 1063, 1129, 1138, 1358 |
| CviQI | GTAC | 1 cut(s) | 1319 |
| DdeI | CTNAG | 4 cut(s) | 176, 1037, 1201, 1218 |
| DpnI | GATC | 7 cut(s) | 73, 122, 194, 309, 906, 956, 1199 |
| DpnII | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| DraIII | CACNNNGTG | 1 cut(s) | 102 |
| EaeI | YGGCCR | 2 cut(s) | 1377, 1428 |
| Eam1104I | CTCTTC | 2 cut(s) | 121, 393 |
| EarI | CTCTTC | 2 cut(s) | 121, 393 |
| Ecl136II | GAGCTC | 1 cut(s) | 1207 |
| Eco130I | CCWWGG | 2 cut(s) | 188, 400 |
| Eco24I | GRGCYC | 1 cut(s) | 1209 |
| Eco47I | GGWCC | 1 cut(s) | 731 |
| Eco53kI | GAGCTC | 1 cut(s) | 1207 |
| Eco57I | CTGAAG | 1 cut(s) | 446 |
| Eco88I | CYCGRG | 1 cut(s) | 1403 |
| Eco91I | GGTNACC | 1 cut(s) | 711 |
| EcoICRI | GAGCTC | 1 cut(s) | 1207 |
| EcoO109I | RGGNCCY | 1 cut(s) | 731 |
| EcoO65I | GGTNACC | 1 cut(s) | 711 |
| EcoRII | CCWGG | 1 cut(s) | 526 |
| EcoT14I | CCWWGG | 2 cut(s) | 188, 400 |
| EcoT38I | GRGCYC | 1 cut(s) | 1209 |
| ErhI | CCWWGG | 2 cut(s) | 188, 400 |
| FaeI | CATG | 7 cut(s) | 192, 761, 1061, 1066, 1132, 1141, 1361 |
| FaqI | GGGAC | 1 cut(s) | 717 |
| FatI | CATG | 7 cut(s) | 188, 757, 1057, 1062, 1128, 1137, 1357 |
| FblI | GTMKAC | 2 cut(s) | 564, 1223 |
| Fnu4HI | GCNGC | 5 cut(s) | 477, 762, 879, 967, 1144 |
| FokI | GGATG | 3 cut(s) | 244, 417, 1082 |
| FriOI | GRGCYC | 1 cut(s) | 1209 |
| Fsp4HI | GCNGC | 5 cut(s) | 477, 762, 879, 967, 1144 |
| FspBI | CTAG | 5 cut(s) | 68, 162, 401, 591, 1316 |
| GlaI | GCGC | 1 cut(s) | 1365 |
| GluI | GCNGC | 5 cut(s) | 477, 762, 879, 967, 1144 |
| GsuI | CTGGAG | 2 cut(s) | 396, 723 |
| HaeIII | GGCC | 3 cut(s) | 540, 1379, 1430 |
| HapII | CCGG | 1 cut(s) | 155 |
| HgaI | GACGC | 1 cut(s) | 979 |
| HhaI | GCGC | 1 cut(s) | 1366 |
| Hin1I | GRCGYC | 1 cut(s) | 866 |
| Hin1II | CATG | 7 cut(s) | 192, 761, 1061, 1066, 1132, 1141, 1361 |
| Hin6I | GCGC | 1 cut(s) | 1364 |
| HinP1I | GCGC | 1 cut(s) | 1364 |
| HinfI | GANTC | 5 cut(s) | 754, 1006, 1054, 1161, 1408 |
| HpaII | CCGG | 1 cut(s) | 155 |
| HphI | GGTGA | 4 cut(s) | 382, 521, 705, 1063 |
| Hpy166II | GTNNAC | 4 cut(s) | 453, 565, 1224, 1298 |
| Hpy188I | TCNGA | 6 cut(s) | 59, 76, 132, 202, 304, 1069 |
| Hpy188III | TCNNGA | 3 cut(s) | 1036, 1358, 1405 |
| Hpy8I | GTNNAC | 4 cut(s) | 453, 565, 1224, 1298 |
| Hpy99I | CGWCG | 1 cut(s) | 868 |
| HpyAV | CCTTC | 3 cut(s) | 38, 71, 1395 |
| HpyCH4III | ACNGT | 1 cut(s) | 562 |
| HpyCH4IV | ACGT | 3 cut(s) | 61, 101, 866 |
| HpyCH4V | TGCA | 7 cut(s) | 621, 689, 703, 761, 854, 936, 1043 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 158, 231, 473, 485, 1081 |
| HpyF3I | CTNAG | 4 cut(s) | 176, 1037, 1201, 1218 |
| HpySE526I | ACGT | 3 cut(s) | 61, 101, 866 |
| Hsp92I | GRCGYC | 1 cut(s) | 866 |
| Hsp92II | CATG | 7 cut(s) | 192, 761, 1061, 1066, 1132, 1141, 1361 |
| HspAI | GCGC | 1 cut(s) | 1364 |
| KflI | GGGWCCC | 1 cut(s) | 731 |
| Kzo9I | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| LmnI | GCTCC | 5 cut(s) | 158, 190, 529, 809, 857 |
| Lsp1109I | GCAGC | 3 cut(s) | 488, 773, 1155 |
| LweI | GCATC | 5 cut(s) | 202, 709, 978, 1122, 1351 |
| MaeI | CTAG | 5 cut(s) | 68, 162, 401, 591, 1316 |
| MaeII | ACGT | 3 cut(s) | 61, 101, 866 |
| MaeIII | GTNAC | 4 cut(s) | 253, 370, 711, 772 |
| MalI | GATC | 7 cut(s) | 73, 122, 194, 309, 906, 956, 1199 |
| MboI | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| MboII | GAAGA | 3 cut(s) | 108, 380, 1099 |
| MflI | RGATCY | 2 cut(s) | 192, 307 |
| MhlI | GDGCHC | 3 cut(s) | 598, 806, 1209 |
| MlsI | TGGCCA | 2 cut(s) | 1379, 1430 |
| MluCI | AATT | 8 cut(s) | 180, 246, 392, 438, 604, 941, 1155, 1327 |
| MluI | ACGCGT | 1 cut(s) | 1011 |
| MluNI | TGGCCA | 2 cut(s) | 1379, 1430 |
| MlyI | GAGTC | 1 cut(s) | 1417 |
| MmeI | TCCRAC | 1 cut(s) | 1047 |
| MnlI | CCTC | 8 cut(s) | 298, 330, 403, 721, 906, 1088, 1114, 1117 |
| Mox20I | TGGCCA | 2 cut(s) | 1379, 1430 |
| MscI | TGGCCA | 2 cut(s) | 1379, 1430 |
| MseI | TTAA | 4 cut(s) | 245, 437, 633, 1001 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1373 |
| Msp20I | TGGCCA | 2 cut(s) | 1379, 1430 |
| MspA1I | CMGCKG | 1 cut(s) | 779 |
| MspI | CCGG | 1 cut(s) | 155 |
| MspR9I | CCNGG | 2 cut(s) | 156, 528 |
| MvaI | CCWGG | 1 cut(s) | 528 |
| MvnI | CGCG | 1 cut(s) | 1013 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 158, 231, 473, 485, 1081 |
| NciI | CCSGG | 1 cut(s) | 156 |
| NcoI | CCATGG | 1 cut(s) | 188 |
| NdeII | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| NlaIII | CATG | 7 cut(s) | 192, 761, 1061, 1066, 1132, 1141, 1361 |
| NlaIV | GGNNCC | 4 cut(s) | 82, 309, 732, 733 |
| NmuCI | GTSAC | 2 cut(s) | 370, 711 |
| PagI | TCATGA | 1 cut(s) | 1357 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 39 |
| PfeI | GAWTC | 4 cut(s) | 754, 1006, 1054, 1161 |
| PkrI | GCNGC | 5 cut(s) | 478, 763, 880, 968, 1145 |
| PleI | GAGTC | 1 cut(s) | 1416 |
| PpsI | GAGTC | 1 cut(s) | 1416 |
| Ppu21I | YACGTR | 1 cut(s) | 102 |
| PpuMI | RGGWCCY | 1 cut(s) | 731 |
| Psp124BI | GAGCTC | 1 cut(s) | 1209 |
| Psp5II | RGGWCCY | 1 cut(s) | 731 |
| Psp6I | CCWGG | 1 cut(s) | 526 |
| PspEI | GGTNACC | 1 cut(s) | 711 |
| PspGI | CCWGG | 1 cut(s) | 526 |
| PspN4I | GGNNCC | 4 cut(s) | 82, 309, 732, 733 |
| PspPI | GGNCC | 2 cut(s) | 538, 731 |
| PspPPI | RGGWCCY | 1 cut(s) | 731 |
| PstI | CTGCAG | 1 cut(s) | 856 |
| PsuI | RGATCY | 2 cut(s) | 192, 307 |
| PvuII | CAGCTG | 1 cut(s) | 779 |
| RsaI | GTAC | 1 cut(s) | 1320 |
| RsaNI | GTAC | 1 cut(s) | 1319 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1373 |
| SacI | GAGCTC | 1 cut(s) | 1209 |
| SaqAI | TTAA | 4 cut(s) | 245, 437, 633, 1001 |
| SatI | GCNGC | 5 cut(s) | 477, 762, 879, 967, 1144 |
| Sau3AI | GATC | 7 cut(s) | 71, 120, 192, 307, 904, 954, 1197 |
| Sau96I | GGNCC | 2 cut(s) | 538, 731 |
| SchI | GAGTC | 1 cut(s) | 1417 |
| ScrFI | CCNGG | 2 cut(s) | 156, 528 |
| SduI | GDGCHC | 3 cut(s) | 598, 806, 1209 |
| SfaNI | GCATC | 5 cut(s) | 202, 709, 978, 1122, 1351 |
| SfcI | CTRYAG | 1 cut(s) | 852 |
| SinI | GGWCC | 1 cut(s) | 731 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1373 |
| Sse9I | AATT | 8 cut(s) | 180, 246, 392, 438, 604, 941, 1155, 1327 |
| SsiI | CCGC | 6 cut(s) | 84, 311, 747, 878, 966, 1084 |
| SspI | AATATT | 1 cut(s) | 894 |
| SspMI | CTAG | 5 cut(s) | 68, 162, 401, 591, 1316 |
| SstI | GAGCTC | 1 cut(s) | 1209 |
| StyD4I | CCNGG | 2 cut(s) | 154, 526 |
| StyI | CCWWGG | 2 cut(s) | 188, 400 |
| TaaI | ACNGT | 1 cut(s) | 562 |
| TaiI | ACGT | 3 cut(s) | 64, 104, 869 |
| TaqI | TCGA | 4 cut(s) | 119, 322, 502, 752 |
| TasI | AATT | 8 cut(s) | 180, 246, 392, 438, 604, 941, 1155, 1327 |
| TauI | GCSGC | 2 cut(s) | 881, 969 |
| TfiI | GAWTC | 4 cut(s) | 754, 1006, 1054, 1161 |
| Tru1I | TTAA | 4 cut(s) | 245, 437, 633, 1001 |
| Tru9I | TTAA | 4 cut(s) | 245, 437, 633, 1001 |
| TscAI | CASTG | 2 cut(s) | 892, 1237 |
| TseFI | GTSAC | 2 cut(s) | 370, 711 |
| TseI | GCWGC | 3 cut(s) | 476, 761, 1143 |
| Tsp45I | GTSAC | 2 cut(s) | 370, 711 |
| TspDTI | ATGAA | 9 cut(s) | 99, 159, 266, 417, 431, 746, 1019, 1046, 1320 |
| TspGWI | ACGGA | 1 cut(s) | 31 |
| TspRI | CASTG | 2 cut(s) | 892, 1237 |
| VpaK11BI | GGWCC | 1 cut(s) | 731 |
| XapI | RAATTY | 2 cut(s) | 604, 1327 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 268, 1135 |
| XmaJI | CCTAGG | 1 cut(s) | 400 |
| XmiI | GTMKAC | 2 cut(s) | 564, 1223 |
| XspI | CTAG | 5 cut(s) | 68, 162, 401, 591, 1316 |
| ZraI | GACGTC | 1 cut(s) | 867 |