Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATMG00513 |
| fragaria_vesca | FvH4_6g34420 FvH4_c1g00470 |
| malus_domestica | MD13G1126900.v1.1 |
| pyrus_communis | pycom12401g00270 pycom17g12740 |
| rosa_chinensis | RchiOBHm_MTg0498221 |
| rosa_laevigata | RLG00000000086 RLG00000000118 RLG00000000360 RLG00000000372 RLG00000000388 |
| rosa_wichuraiana | Rw0G023320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1034 |
| Acc36I | ACCTGC | 2 cut(s) | 173, 1199 |
| AccI | GTMKAC | 2 cut(s) | 729, 1388 |
| AccII | CGCG | 1 cut(s) | 1178 |
| AciI | CCGC | 6 cut(s) | 219, 476, 912, 1043, 1131, 1249 |
| AclI | AACGTT | 1 cut(s) | 51 |
| AclWI | GGATC | 4 cut(s) | 214, 335, 467, 480 |
| AcsI | RAATTY | 1 cut(s) | 769 |
| AcuI | CTGAAG | 1 cut(s) | 611 |
| AcyI | GRCGYC | 2 cut(s) | 67, 1031 |
| AdeI | CACNNNGTG | 2 cut(s) | 35, 237 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 167, 571, 994, 1398 |
| AflIII | ACRYGT | 1 cut(s) | 1176 |
| AgsI | TTSAA | 6 cut(s) | 557, 722, 738, 983, 1095, 1186 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 43, 93 |
| AjnI | CCWGG | 2 cut(s) | 564, 691 |
| Alw21I | GWGCWC | 2 cut(s) | 971, 1374 |
| AlwI | GGATC | 4 cut(s) | 214, 335, 467, 480 |
| AoxI | GGCC | 1 cut(s) | 703 |
| ApeKI | GCWGC | 3 cut(s) | 641, 926, 1308 |
| ApoI | RAATTY | 1 cut(s) | 769 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 368, 400 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1406 |
| AspS9I | GGNCC | 3 cut(s) | 439, 703, 896 |
| AsuC2I | CCSGG | 1 cut(s) | 291 |
| AsuHPI | GGTGA | 5 cut(s) | 21, 547, 686, 870, 1228 |
| AvaII | GGWCC | 2 cut(s) | 439, 896 |
| BaeGI | GKGCMC | 1 cut(s) | 763 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 891, 924 |
| BamHI | GGATCC | 1 cut(s) | 472 |
| BanII | GRGCYC | 1 cut(s) | 1374 |
| BauI | CACGAG | 1 cut(s) | 750 |
| Bbv12I | GWGCWC | 2 cut(s) | 971, 1374 |
| BbvI | GCAGC | 3 cut(s) | 653, 938, 1320 |
| BccI | CCATC | 4 cut(s) | 450, 564, 1249, 1400 |
| BceAI | ACGGC | 2 cut(s) | 690, 1011 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 467, 501 |
| BciT130I | CCWGG | 2 cut(s) | 566, 693 |
| BciVI | GTATCC | 1 cut(s) | 919 |
| BclI | TGATCA | 1 cut(s) | 120 |
| BcnI | CCSGG | 1 cut(s) | 291 |
| BfaI | CTAG | 4 cut(s) | 203, 297, 756, 1411 |
| BfmI | CTRYAG | 1 cut(s) | 1017 |
| BfuAI | ACCTGC | 2 cut(s) | 173, 1199 |
| BfuI | GTATCC | 1 cut(s) | 919 |
| BisI | GCNGC | 5 cut(s) | 642, 927, 1044, 1132, 1309 |
| BlsI | GCNGC | 5 cut(s) | 643, 928, 1045, 1133, 1310 |
| Bme1390I | CCNGG | 3 cut(s) | 291, 566, 693 |
| Bme18I | GGWCC | 2 cut(s) | 439, 896 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 43, 93 |
| BmgT120I | GGNCC | 3 cut(s) | 439, 703, 896 |
| BmiI | GGNNCC | 4 cut(s) | 217, 474, 897, 898 |
| BmrFI | CCNGG | 3 cut(s) | 291, 566, 693 |
| BmsI | GCATC | 4 cut(s) | 337, 874, 1143, 1287 |
| BpmI | CTGGAG | 2 cut(s) | 561, 888 |
| BpuMI | CCSGG | 1 cut(s) | 291 |
| BsaAI | YACGTR | 1 cut(s) | 237 |
| BsaHI | GRCGYC | 2 cut(s) | 67, 1031 |
| BsaJI | CCNNGG | 4 cut(s) | 323, 468, 565, 692 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 167, 571, 994, 1398 |
| Bse1I | ACTGG | 4 cut(s) | 544, 905, 1057, 1345 |
| BseBI | CCWGG | 2 cut(s) | 566, 693 |
| BseDI | CCNNGG | 4 cut(s) | 323, 468, 565, 692 |
| BseGI | GGATG | 3 cut(s) | 422, 575, 1240 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 167, 571, 994, 1398 |
| BseMII | CTCAG | 1 cut(s) | 1193 |
| BseNI | ACTGG | 4 cut(s) | 544, 905, 1057, 1345 |
| BseRI | GAGGAG | 1 cut(s) | 1261 |
| BseSI | GKGCMC | 1 cut(s) | 763 |
| BseXI | GCAGC | 3 cut(s) | 653, 938, 1320 |
| BsgI | GTGCAG | 1 cut(s) | 1227 |
| Bsh1236I | CGCG | 1 cut(s) | 1178 |
| Bsh1285I | CGRYCG | 2 cut(s) | 47, 399 |
| BshFI | GGCC | 1 cut(s) | 705 |
| BsiEI | CGRYCG | 2 cut(s) | 47, 399 |
| BsiHKAI | GWGCWC | 2 cut(s) | 971, 1374 |
| BsiSI | CCGG | 1 cut(s) | 290 |
| BslFI | GGGAC | 1 cut(s) | 882 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 167, 571, 994, 1398 |
| BsmFI | GGGAC | 1 cut(s) | 882 |
| BsnI | GGCC | 1 cut(s) | 705 |
| Bsp1286I | GDGCHC | 3 cut(s) | 763, 971, 1374 |
| Bsp143I | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| Bsp19I | CCATGG | 1 cut(s) | 323 |
| BspACI | CCGC | 6 cut(s) | 219, 476, 912, 1043, 1131, 1249 |
| BspANI | GGCC | 1 cut(s) | 705 |
| BspCNI | CTCAG | 1 cut(s) | 1194 |
| BspFNI | CGCG | 1 cut(s) | 1178 |
| BspHI | TCATGA | 1 cut(s) | 954 |
| BspLI | GGNNCC | 4 cut(s) | 217, 474, 897, 898 |
| BspMAI | CTGCAG | 1 cut(s) | 1021 |
| BspMI | ACCTGC | 2 cut(s) | 173, 1199 |
| BspPI | GGATC | 4 cut(s) | 214, 335, 467, 480 |
| BsrI | ACTGG | 4 cut(s) | 544, 905, 1057, 1345 |
| BssECI | CCNNGG | 4 cut(s) | 323, 468, 565, 692 |
| BssMI | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| BssNAI | GTATAC | 1 cut(s) | 1389 |
| BssNI | GRCGYC | 2 cut(s) | 67, 1031 |
| BssSI | CACGAG | 1 cut(s) | 750 |
| BssT1I | CCWWGG | 1 cut(s) | 323 |
| Bst1107I | GTATAC | 1 cut(s) | 1389 |
| Bst2BI | CACGAG | 1 cut(s) | 750 |
| Bst2UI | CCWGG | 2 cut(s) | 566, 693 |
| Bst4CI | ACNGT | 3 cut(s) | 45, 400, 727 |
| Bst6I | CTCTTC | 2 cut(s) | 256, 558 |
| BstACI | GRCGYC | 2 cut(s) | 67, 1031 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1246 |
| BstBAI | YACGTR | 1 cut(s) | 237 |
| BstC8I | GCNNGC | 5 cut(s) | 304, 946, 1129, 1266, 1374 |
| BstDEI | CTNAG | 4 cut(s) | 311, 1202, 1366, 1383 |
| BstDSI | CCRYGG | 1 cut(s) | 323 |
| BstEII | GGTNACC | 1 cut(s) | 876 |
| BstF5I | GGATG | 3 cut(s) | 422, 575, 1240 |
| BstFNI | CGCG | 1 cut(s) | 1178 |
| BstKTI | GATC | 8 cut(s) | 123, 209, 258, 330, 475, 1072, 1122, 1365 |
| BstMBI | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| BstMCI | CGRYCG | 2 cut(s) | 47, 399 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 293, 638, 650, 1246 |
| BstNI | CCWGG | 2 cut(s) | 566, 693 |
| BstPI | GGTNACC | 1 cut(s) | 876 |
| BstSCI | CCNGG | 3 cut(s) | 289, 564, 691 |
| BstSFI | CTRYAG | 1 cut(s) | 1017 |
| BstSLI | GKGCMC | 1 cut(s) | 763 |
| BstUI | CGCG | 1 cut(s) | 1178 |
| BstV1I | GCAGC | 3 cut(s) | 653, 938, 1320 |
| BstX2I | RGATCY | 2 cut(s) | 327, 472 |
| BstYI | RGATCY | 2 cut(s) | 327, 472 |
| BstZ17I | GTATAC | 1 cut(s) | 1389 |
| BsuI | GTATCC | 1 cut(s) | 919 |
| BsuRI | GGCC | 1 cut(s) | 705 |
| BtgI | CCRYGG | 1 cut(s) | 323 |
| BtsCI | GGATG | 3 cut(s) | 422, 575, 1240 |
| BtsIMutI | CAGTG | 2 cut(s) | 1050, 1402 |
| BveI | ACCTGC | 2 cut(s) | 173, 1199 |
| Cac8I | GCNNGC | 5 cut(s) | 304, 946, 1129, 1266, 1374 |
| CciI | TCATGA | 1 cut(s) | 954 |
| Cfr13I | GGNCC | 3 cut(s) | 439, 703, 896 |
| CseI | GACGC | 2 cut(s) | 56, 1144 |
| CviAII | CATG | 7 cut(s) | 324, 923, 955, 1223, 1228, 1294, 1303 |
| DdeI | CTNAG | 4 cut(s) | 311, 1202, 1366, 1383 |
| DpnI | GATC | 8 cut(s) | 122, 208, 257, 329, 474, 1071, 1121, 1364 |
| DpnII | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| DraIII | CACNNNGTG | 2 cut(s) | 35, 237 |
| DriI | GACNNNNNGTC | 2 cut(s) | 43, 93 |
| Eam1104I | CTCTTC | 2 cut(s) | 256, 558 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 43, 93 |
| EarI | CTCTTC | 2 cut(s) | 256, 558 |
| Ecl136II | GAGCTC | 1 cut(s) | 1372 |
| Eco130I | CCWWGG | 1 cut(s) | 323 |
| Eco24I | GRGCYC | 1 cut(s) | 1374 |
| Eco47I | GGWCC | 2 cut(s) | 439, 896 |
| Eco53kI | GAGCTC | 1 cut(s) | 1372 |
| Eco57I | CTGAAG | 1 cut(s) | 611 |
| Eco91I | GGTNACC | 1 cut(s) | 876 |
| EcoICRI | GAGCTC | 1 cut(s) | 1372 |
| EcoO109I | RGGNCCY | 1 cut(s) | 896 |
| EcoO65I | GGTNACC | 1 cut(s) | 876 |
| EcoRII | CCWGG | 2 cut(s) | 564, 691 |
| EcoT14I | CCWWGG | 1 cut(s) | 323 |
| EcoT38I | GRGCYC | 1 cut(s) | 1374 |
| ErhI | CCWWGG | 1 cut(s) | 323 |
| FaeI | CATG | 7 cut(s) | 327, 926, 958, 1226, 1231, 1297, 1306 |
| FaqI | GGGAC | 1 cut(s) | 882 |
| FatI | CATG | 7 cut(s) | 323, 922, 954, 1222, 1227, 1293, 1302 |
| FbaI | TGATCA | 1 cut(s) | 120 |
| FblI | GTMKAC | 2 cut(s) | 729, 1388 |
| Fnu4HI | GCNGC | 5 cut(s) | 642, 927, 1044, 1132, 1309 |
| FokI | GGATG | 3 cut(s) | 409, 582, 1247 |
| FriOI | GRGCYC | 1 cut(s) | 1374 |
| Fsp4HI | GCNGC | 5 cut(s) | 642, 927, 1044, 1132, 1309 |
| FspBI | CTAG | 4 cut(s) | 203, 297, 756, 1411 |
| GluI | GCNGC | 5 cut(s) | 642, 927, 1044, 1132, 1309 |
| GsuI | CTGGAG | 2 cut(s) | 561, 888 |
| HaeIII | GGCC | 1 cut(s) | 705 |
| HapII | CCGG | 1 cut(s) | 290 |
| HgaI | GACGC | 2 cut(s) | 56, 1144 |
| Hin1I | GRCGYC | 2 cut(s) | 67, 1031 |
| Hin1II | CATG | 7 cut(s) | 327, 926, 958, 1226, 1231, 1297, 1306 |
| HinfI | GANTC | 4 cut(s) | 38, 919, 1171, 1219 |
| HpaII | CCGG | 1 cut(s) | 290 |
| HphI | GGTGA | 5 cut(s) | 21, 547, 686, 870, 1228 |
| Hpy166II | GTNNAC | 3 cut(s) | 618, 730, 1389 |
| Hpy188I | TCNGA | 9 cut(s) | 105, 120, 194, 211, 267, 337, 376, 469, 1234 |
| Hpy188III | TCNNGA | 2 cut(s) | 955, 1201 |
| Hpy8I | GTNNAC | 3 cut(s) | 618, 730, 1389 |
| Hpy99I | CGWCG | 1 cut(s) | 1033 |
| HpyAV | CCTTC | 2 cut(s) | 173, 206 |
| HpyCH4III | ACNGT | 3 cut(s) | 45, 400, 727 |
| HpyCH4IV | ACGT | 4 cut(s) | 51, 196, 236, 1031 |
| HpyCH4V | TGCA | 6 cut(s) | 786, 868, 926, 1019, 1101, 1208 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 293, 638, 650, 1246 |
| HpyF3I | CTNAG | 4 cut(s) | 311, 1202, 1366, 1383 |
| HpySE526I | ACGT | 4 cut(s) | 51, 196, 236, 1031 |
| Hsp92I | GRCGYC | 2 cut(s) | 67, 1031 |
| Hsp92II | CATG | 7 cut(s) | 327, 926, 958, 1226, 1231, 1297, 1306 |
| KflI | GGGWCCC | 1 cut(s) | 896 |
| Ksp22I | TGATCA | 1 cut(s) | 120 |
| Kzo9I | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| LmnI | GCTCC | 5 cut(s) | 293, 325, 694, 974, 1022 |
| Lsp1109I | GCAGC | 3 cut(s) | 653, 938, 1320 |
| LweI | GCATC | 4 cut(s) | 337, 874, 1143, 1287 |
| MaeI | CTAG | 4 cut(s) | 203, 297, 756, 1411 |
| MaeII | ACGT | 4 cut(s) | 51, 196, 236, 1031 |
| MaeIII | GTNAC | 6 cut(s) | 35, 367, 418, 535, 876, 937 |
| MalI | GATC | 8 cut(s) | 122, 208, 257, 329, 474, 1071, 1121, 1364 |
| MboI | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| MboII | GAAGA | 4 cut(s) | 47, 243, 545, 1264 |
| MflI | RGATCY | 2 cut(s) | 327, 472 |
| MhlI | GDGCHC | 3 cut(s) | 763, 971, 1374 |
| MluCI | AATT | 9 cut(s) | 25, 132, 315, 411, 557, 603, 769, 1106, 1320 |
| MluI | ACGCGT | 1 cut(s) | 1176 |
| MlyI | GAGTC | 1 cut(s) | 32 |
| MmeI | TCCRAC | 1 cut(s) | 1212 |
| MnlI | CCTC | 7 cut(s) | 463, 495, 568, 886, 1071, 1279, 1282 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1406 |
| MseI | TTAA | 5 cut(s) | 9, 410, 602, 798, 1166 |
| MspA1I | CMGCKG | 1 cut(s) | 944 |
| MspI | CCGG | 1 cut(s) | 290 |
| MspR9I | CCNGG | 3 cut(s) | 291, 566, 693 |
| MvaI | CCWGG | 2 cut(s) | 566, 693 |
| MvnI | CGCG | 1 cut(s) | 1178 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 293, 638, 650, 1246 |
| NciI | CCSGG | 1 cut(s) | 291 |
| NcoI | CCATGG | 1 cut(s) | 323 |
| NdeII | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| NlaIII | CATG | 7 cut(s) | 327, 926, 958, 1226, 1231, 1297, 1306 |
| NlaIV | GGNNCC | 4 cut(s) | 217, 474, 897, 898 |
| NmuCI | GTSAC | 4 cut(s) | 35, 367, 535, 876 |
| PagI | TCATGA | 1 cut(s) | 954 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 64, 174 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1406 |
| PfeI | GAWTC | 3 cut(s) | 919, 1171, 1219 |
| PkrI | GCNGC | 5 cut(s) | 643, 928, 1045, 1133, 1310 |
| PleI | GAGTC | 1 cut(s) | 32 |
| PpsI | GAGTC | 1 cut(s) | 32 |
| Ppu21I | YACGTR | 1 cut(s) | 237 |
| PpuMI | RGGWCCY | 1 cut(s) | 896 |
| Psp124BI | GAGCTC | 1 cut(s) | 1374 |
| Psp1406I | AACGTT | 1 cut(s) | 51 |
| Psp5II | RGGWCCY | 1 cut(s) | 896 |
| Psp6I | CCWGG | 2 cut(s) | 564, 691 |
| PspEI | GGTNACC | 1 cut(s) | 876 |
| PspGI | CCWGG | 2 cut(s) | 564, 691 |
| PspN4I | GGNNCC | 4 cut(s) | 217, 474, 897, 898 |
| PspPI | GGNCC | 3 cut(s) | 439, 703, 896 |
| PspPPI | RGGWCCY | 1 cut(s) | 896 |
| PstI | CTGCAG | 1 cut(s) | 1021 |
| PsuI | RGATCY | 2 cut(s) | 327, 472 |
| PvuII | CAGCTG | 1 cut(s) | 944 |
| SacI | GAGCTC | 1 cut(s) | 1374 |
| SaqAI | TTAA | 5 cut(s) | 9, 410, 602, 798, 1166 |
| SatI | GCNGC | 5 cut(s) | 642, 927, 1044, 1132, 1309 |
| Sau3AI | GATC | 8 cut(s) | 120, 206, 255, 327, 472, 1069, 1119, 1362 |
| Sau96I | GGNCC | 3 cut(s) | 439, 703, 896 |
| SchI | GAGTC | 1 cut(s) | 32 |
| ScrFI | CCNGG | 3 cut(s) | 291, 566, 693 |
| SduI | GDGCHC | 3 cut(s) | 763, 971, 1374 |
| SfaNI | GCATC | 4 cut(s) | 337, 874, 1143, 1287 |
| SfcI | CTRYAG | 1 cut(s) | 1017 |
| SinI | GGWCC | 2 cut(s) | 439, 896 |
| Sse9I | AATT | 9 cut(s) | 25, 132, 315, 411, 557, 603, 769, 1106, 1320 |
| SsiI | CCGC | 6 cut(s) | 219, 476, 912, 1043, 1131, 1249 |
| SspI | AATATT | 1 cut(s) | 1059 |
| SspMI | CTAG | 4 cut(s) | 203, 297, 756, 1411 |
| SstI | GAGCTC | 1 cut(s) | 1374 |
| StyD4I | CCNGG | 3 cut(s) | 289, 564, 691 |
| StyI | CCWWGG | 1 cut(s) | 323 |
| TaaI | ACNGT | 3 cut(s) | 45, 400, 727 |
| TaiI | ACGT | 4 cut(s) | 54, 199, 239, 1034 |
| TaqI | TCGA | 7 cut(s) | 47, 129, 254, 387, 487, 667, 917 |
| TasI | AATT | 9 cut(s) | 25, 132, 315, 411, 557, 603, 769, 1106, 1320 |
| TauI | GCSGC | 2 cut(s) | 1046, 1134 |
| TfiI | GAWTC | 3 cut(s) | 919, 1171, 1219 |
| Tru1I | TTAA | 5 cut(s) | 9, 410, 602, 798, 1166 |
| Tru9I | TTAA | 5 cut(s) | 9, 410, 602, 798, 1166 |
| TscAI | CASTG | 2 cut(s) | 1057, 1402 |
| TseFI | GTSAC | 4 cut(s) | 35, 367, 535, 876 |
| TseI | GCWGC | 3 cut(s) | 641, 926, 1308 |
| Tsp45I | GTSAC | 4 cut(s) | 35, 367, 535, 876 |
| TspDTI | ATGAA | 8 cut(s) | 234, 294, 582, 596, 911, 943, 1184, 1211 |
| TspGWI | ACGGA | 1 cut(s) | 166 |
| TspRI | CASTG | 2 cut(s) | 1057, 1402 |
| VpaK11BI | GGWCC | 2 cut(s) | 439, 896 |
| XapI | RAATTY | 1 cut(s) | 769 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 433, 1300 |
| XmiI | GTMKAC | 2 cut(s) | 729, 1388 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1406 |
| XspI | CTAG | 4 cut(s) | 203, 297, 756, 1411 |
| ZraI | GACGTC | 1 cut(s) | 1032 |