MD00G1109900.v1.1

Protein kinase PINOID-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0012958
Physical Location & Seq
Forward (+)
22967689 .. 22970388
2700 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1109900.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGTTAGAGCGTGATTCGGATGGTGAAGCAGTAAACTCGAGTCACAGTTCAATGAGCAGTGAGAGCTGTAGCAGCTTCAGCCGCCTTTCTTTCGACGCTGCCGCGACCACCACCACATCCGACCTCGCGGCAGAGACATTATGCCTCAAGCCTCACCGCTCCTCCGACTTCGCCTACTCCGCCATTCGCTCCAAAAAAACTGCCCTCACTTTCCGCGACTTCCACCTCCACCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCACCCTCAGAAGTAGCGACTCTCCAAGTCCGGCCGATCAGGATCCCGAGTCTTCGTCTTCCTCGTGCCTTTACGCCATGAAAGTCGTCGACAAGGAGGCTCTGGCGCTGAAGAAGAAGGAGCAGAGAGCCGAGATGGAGAGAAAGATCCTCAAAATGCTCGACCACCCGTTCTTGCCCACTCTCTACGCCGAGTTCGAAGCCTCCCATTTCTCCTGCATCGTCATGGAGTACTGCTCCGGCGGCGACCTCCACTCCCTCCGCCACAAACAGCCTCACAAACGCTTCTCCCTCAACTCCGCAAGGTTCTACGCTGCGGAGGTTCTGGTGGCGTTGGAATACCTCCACATGCTGGGAATCATTTACAGGGACCTAAAACCCGAGAACGTGCTTGTCAGATCGGACGGTCACATCATGCTCTCAGATTTTGACCTCTCAATGTGCTCGGATGCAATCCCAGCCGTTGAATCACCCGACTCCGCAGCCTTTTCGACCCCATCGTGCACCCGCCCGCACCAGACCGCAGCTCTCACCCCCTTCTCCTGCCTTTCCAACCGGCTGTTCCGGTCGCGCAAGGTCCAGACCCTCTCCCCCAACCGGCTCTTCGTCGCCGAACCGGTCACCGCCAGGTCGCAGTCCTTCGTCGGGACCCACGAGTACGTGACCCCAGAAGTTGCCTCCGGTGGGTCCCACGGAAACGCCGTCGACTGGTGGGCTTTTGGCATTTTCCTCTACGAGTTGATCTACGGGCACACGCCGTTCGCGGCCCCATCGAACGAGACCACCCTGCGTAACATTGTGAAAAAACCTTTAACATTCCCAACCTCCACGCCTTCCAGCGAGCTTGAGGGCCACGCTCGGGACCTCATTTCCGGGTTCCTCAACAAGGACCCGGACCAACGGCTCGGGTCGAAGCGCGGAGCCGCTGACGTCAAGAAGCATCCGTTCTTCAAGGGCATCAACTTGGCGTTGGTACGGTCGATCACGCCGCCGATGATCCCGGGTTTGATAAGAAGGCAAAACACGACGCCGTATTACCAGGCCAAGAGCGAGGATGGACGAAATAACAGACAAACGACGGCGTTCGATTACTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009986 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0010154 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0080167 GO:0090558 GO:0090567 GO:0090627 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000012
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

456

Amino Acids

50.53

Weight (kDa)

8.03

Isoelectric Point (pI)

55.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 74 - 236 1.7e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 75 - 237 8.8e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 301 - 407 6.8e-19 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012958)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34650
fragaria_vesca FvH4_3g09660
malus_domestica MD00G1109900.v1.1 MD05G1276300.v1.1
prunus_persica Prupe.4G088000_v2.0.a1 Prupe.4G088000_v2.0.a1
pyrus_communis pycom05g25730 pycom10g21130
rosa_chinensis RchiOBHm_Chr5g0015331
rosa_laevigata RLG00000032193
rosa_multiflora Rmu_co8298181.1_g000001
rosa_roxburghii Rroxscaffold_1G00061120
rosa_rugosa Rorug05G0026700
rosa_samantha Rh5AG120200 Rh5BG119100 Rh5CG129600 Rh5DG118000
rosa_wichuraiana Rw5G010390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1203
AccB1I GGYRCC 2 cut(s) 242, 257
AccB7I CCANNNNNTGG 1 cut(s) 622
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 3 cut(s) 264, 360, 975
AccII CGCG 6 cut(s) 104, 128, 216, 841, 1034, 1188
AclWI GGATC 4 cut(s) 308, 321, 412, 1261
AcoI YGGCCR 1 cut(s) 303
AcuI CTGAAG 2 cut(s) 61, 401
AcyI GRCGYC 3 cut(s) 243, 1200, 1298
AfaI GTAC 3 cut(s) 503, 929, 1245
AfiI CCNNNNNNNGG 7 cut(s) 622, 867, 915, 954, 978, 1129, 1156
AgeI ACCGGT 1 cut(s) 886
AgsI TTSAA 3 cut(s) 51, 737, 1222
AjnI CCWGG 2 cut(s) 896, 1308
AjuI GAANNNNNNNTTGG 4 cut(s) 815, 847, 857, 889
AluBI AGCT 4 cut(s) 66, 75, 797, 1114
AluI AGCT 4 cut(s) 66, 75, 797, 1114
Alw21I GWGCWC 2 cut(s) 716, 776
Alw26I GTCTC 2 cut(s) 128, 1043
Alw44I GTGCAC 1 cut(s) 772
AlwI GGATC 4 cut(s) 308, 321, 412, 1261
Ama87I CYCGRG 6 cut(s) 37, 317, 650, 1128, 1175, 1270
AoxI GGCC 4 cut(s) 303, 1035, 1120, 1311
ApaLI GTGCAC 1 cut(s) 772
ApeKI GCWGC 5 cut(s) 72, 98, 584, 752, 794
AsiGI ACCGGT 1 cut(s) 886
AspLEI GCGC 4 cut(s) 245, 379, 843, 1188
AspS9I GGNCC 9 cut(s) 640, 847, 918, 957, 1036, 1120, 1132, 1159, 1165
AsuC2I CCSGG 4 cut(s) 1144, 1163, 1271, 1272
AsuHPI GGTGA 5 cut(s) 35, 146, 732, 793, 883
AsuII TTCGAA 1 cut(s) 468
AvaI CYCGRG 6 cut(s) 37, 317, 650, 1128, 1175, 1270
AvaII GGWCC 7 cut(s) 640, 847, 918, 957, 1132, 1159, 1165
BaeGI GKGCMC 2 cut(s) 776, 1023
BamHI GGATCC 1 cut(s) 313
BanI GGYRCC 2 cut(s) 242, 257
BauI CACGAG 2 cut(s) 334, 923
BbsI GAAGAC 2 cut(s) 315, 321
Bbv12I GWGCWC 2 cut(s) 716, 776
BbvI GCAGC 5 cut(s) 84, 85, 571, 764, 806
BccI CCATC 5 cut(s) 14, 400, 775, 1048, 1319
BceAI ACGGC 6 cut(s) 716, 956, 1012, 1187, 1285, 1365
BcgI CGANNNNNNTGC 4 cut(s) 18, 52, 741, 775
BciT130I CCWGG 2 cut(s) 898, 1310
BcnI CCSGG 4 cut(s) 1144, 1163, 1271, 1272
BcoDI GTCTC 2 cut(s) 128, 1043
BfmI CTRYAG 1 cut(s) 67
BfoI RGCGCY 2 cut(s) 246, 380
BglI GCCNNNNNGGC 1 cut(s) 240
BmcAI AGTACT 1 cut(s) 503
Bme1390I CCNGG 6 cut(s) 898, 1144, 1163, 1271, 1272, 1310
Bme18I GGWCC 7 cut(s) 640, 847, 918, 957, 1132, 1159, 1165
BmeT110I CYCGRG 6 cut(s) 37, 317, 650, 1128, 1175, 1270
BmgT120I GGNCC 9 cut(s) 640, 847, 918, 957, 1036, 1120, 1132, 1159, 1165
BmrFI CCNGG 6 cut(s) 898, 1144, 1163, 1271, 1272, 1310
BmsI GCATC 5 cut(s) 246, 498, 709, 1219, 1236
BpiI GAAGAC 2 cut(s) 315, 321
BplI GAGNNNNNCTC 2 cut(s) 491, 523
Bpu14I TTCGAA 1 cut(s) 468
BpuEI CTTGAG 2 cut(s) 131, 1136
BpuMI CCSGG 4 cut(s) 1144, 1163, 1271, 1272
BsaAI YACGTR 1 cut(s) 931
BsaBI GATNNNNATC 1 cut(s) 312
BsaHI GRCGYC 3 cut(s) 243, 1200, 1298
BsaI GGTCTC 1 cut(s) 1043
BsaJI CCNNGG 2 cut(s) 961, 1270
BsaWI WCCGGW 3 cut(s) 834, 886, 950
BsaXI ACNNNNNCTCC 4 cut(s) 146, 176, 509, 539
Bsc4I CCNNNNNNNGG 7 cut(s) 622, 867, 915, 954, 978, 1129, 1156
Bse118I RCCGGY 4 cut(s) 245, 825, 867, 886
Bse1I ACTGG 1 cut(s) 983
Bse8I GATNNNNATC 1 cut(s) 312
BseBI CCWGG 2 cut(s) 898, 1310
BseDI CCNNGG 2 cut(s) 961, 1270
BseGI GGATG 5 cut(s) 25, 116, 724, 1210, 1330
BseJI GATNNNNATC 1 cut(s) 312
BseLI CCNNNNNNNGG 7 cut(s) 622, 867, 915, 954, 978, 1129, 1156
BseMII CTCAG 2 cut(s) 292, 705
BseNI ACTGG 1 cut(s) 983
BseRI GAGGAG 1 cut(s) 151
BseSI GKGCMC 2 cut(s) 776, 1023
BseX3I CGGCCG 1 cut(s) 303
BseXI GCAGC 5 cut(s) 84, 85, 571, 764, 806
BseYI CCCAGC 2 cut(s) 622, 727
BsgI GTGCAG 1 cut(s) 256
Bsh1236I CGCG 6 cut(s) 104, 128, 216, 841, 1034, 1188
Bsh1285I CGRYCG 3 cut(s) 306, 839, 1250
BshFI GGCC 4 cut(s) 305, 1037, 1122, 1313
BshNI GGYRCC 2 cut(s) 242, 257
BshTI ACCGGT 1 cut(s) 886
BsiEI CGRYCG 3 cut(s) 306, 839, 1250
BsiHKAI GWGCWC 2 cut(s) 716, 776
BsiHKCI CYCGRG 6 cut(s) 37, 317, 650, 1128, 1175, 1270
BslFI GGGAC 4 cut(s) 653, 931, 943, 1145
BslI CCNNNNNNNGG 7 cut(s) 622, 867, 915, 954, 978, 1129, 1156
BsmAI GTCTC 2 cut(s) 128, 1043
BsmFI GGGAC 4 cut(s) 653, 931, 943, 1145
BsnI GGCC 4 cut(s) 305, 1037, 1122, 1313
Bso31I GGTCTC 1 cut(s) 1043
BsoBI CYCGRG 6 cut(s) 37, 317, 650, 1128, 1175, 1270
Bsp119I TTCGAA 1 cut(s) 468
Bsp1286I GDGCHC 3 cut(s) 716, 776, 1023
Bsp143I GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
BspANI GGCC 4 cut(s) 305, 1037, 1122, 1313
BspCNI CTCAG 2 cut(s) 291, 704
BspFNI CGCG 6 cut(s) 104, 128, 216, 841, 1034, 1188
BspPI GGATC 4 cut(s) 308, 321, 412, 1261
BspQI GCTCTTC 1 cut(s) 878
BspT104I TTCGAA 1 cut(s) 468
BspT107I GGYRCC 2 cut(s) 242, 257
BspTNI GGTCTC 1 cut(s) 1043
BsrBI CCGCTC 1 cut(s) 159
BsrFI RCCGGY 4 cut(s) 245, 825, 867, 886
BsrI ACTGG 1 cut(s) 983
BssAI RCCGGY 4 cut(s) 245, 825, 867, 886
BssECI CCNNGG 2 cut(s) 961, 1270
BssMI GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
BssNI GRCGYC 3 cut(s) 243, 1200, 1298
BssSI CACGAG 2 cut(s) 334, 923
Bst2BI CACGAG 2 cut(s) 334, 923
Bst2UI CCWGG 2 cut(s) 898, 1310
Bst4CI ACNGT 4 cut(s) 47, 262, 677, 1248
Bst6I CTCTTC 1 cut(s) 878
BstACI GRCGYC 3 cut(s) 243, 1200, 1298
BstBAI YACGTR 1 cut(s) 931
BstBI TTCGAA 1 cut(s) 468
BstC8I GCNNGC 3 cut(s) 247, 782, 1112
BstDEI CTNAG 2 cut(s) 278, 691
BstDSI CCRYGG 1 cut(s) 961
BstEII GGTNACC 1 cut(s) 889
BstENI CCTNNNNNAGG 1 cut(s) 1154
BstF5I GGATG 5 cut(s) 25, 116, 724, 1210, 1330
BstFNI CGCG 6 cut(s) 104, 128, 216, 841, 1034, 1188
BstH2I RGCGCY 2 cut(s) 246, 380
BstHHI GCGC 4 cut(s) 245, 379, 843, 1188
BstKTI GATC 7 cut(s) 310, 316, 420, 671, 1014, 1254, 1269
BstMAI GTCTC 2 cut(s) 128, 1043
BstMBI GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
BstMCI CGRYCG 3 cut(s) 306, 839, 1250
BstMWI GCNNNNNNNGC 9 cut(s) 63, 72, 78, 81, 179, 240, 255, 513, 728
BstNI CCWGG 2 cut(s) 898, 1310
BstNSI RCATGY 1 cut(s) 622
BstPI GGTNACC 1 cut(s) 889
BstSCI CCNGG 6 cut(s) 896, 1142, 1161, 1269, 1270, 1308
BstSFI CTRYAG 1 cut(s) 67
BstSLI GKGCMC 2 cut(s) 776, 1023
BstUI CGCG 6 cut(s) 104, 128, 216, 841, 1034, 1188
BstV1I GCAGC 5 cut(s) 84, 85, 571, 764, 806
BstV2I GAAGAC 2 cut(s) 315, 321
BstX2I RGATCY 2 cut(s) 313, 417
BstYI RGATCY 2 cut(s) 313, 417
BstZI CGGCCG 1 cut(s) 303
BsuRI GGCC 4 cut(s) 305, 1037, 1122, 1313
BtgI CCRYGG 1 cut(s) 961
BtsCI GGATG 5 cut(s) 25, 116, 724, 1210, 1330
BtsI GCAGTG 1 cut(s) 64
BtsIMutI CAGTG 1 cut(s) 64
Cac8I GCNNGC 3 cut(s) 247, 782, 1112
CfoI GCGC 4 cut(s) 245, 379, 843, 1188
Cfr10I RCCGGY 4 cut(s) 245, 825, 867, 886
Cfr13I GGNCC 9 cut(s) 640, 847, 918, 957, 1036, 1120, 1132, 1159, 1165
Cfr9I CCCGGG 1 cut(s) 1270
CseI GACGC 2 cut(s) 104, 1306
Csp6I GTAC 3 cut(s) 502, 928, 1244
CspAI ACCGGT 1 cut(s) 886
CviAII CATG 4 cut(s) 349, 496, 619, 685
CviQI GTAC 3 cut(s) 502, 928, 1244
DdeI CTNAG 2 cut(s) 278, 691
DinI GGCGCC 1 cut(s) 244
DpnI GATC 7 cut(s) 309, 315, 419, 670, 1013, 1253, 1268
DpnII GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
EaeI YGGCCR 1 cut(s) 303
EagI CGGCCG 1 cut(s) 303
Eam1104I CTCTTC 1 cut(s) 878
EarI CTCTTC 1 cut(s) 878
EciI GGCGGA 2 cut(s) 169, 521
EclXI CGGCCG 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 1043
Eco47I GGWCC 7 cut(s) 640, 847, 918, 957, 1132, 1159, 1165
Eco52I CGGCCG 1 cut(s) 303
Eco57I CTGAAG 2 cut(s) 61, 401
Eco88I CYCGRG 6 cut(s) 37, 317, 650, 1128, 1175, 1270
Eco91I GGTNACC 1 cut(s) 889
EcoNI CCTNNNNNAGG 1 cut(s) 1154
EcoO109I RGGNCCY 5 cut(s) 640, 918, 957, 1132, 1159
EcoO65I GGTNACC 1 cut(s) 889
EcoRII CCWGG 2 cut(s) 896, 1308
EgeI GGCGCC 1 cut(s) 244
EheI GGCGCC 1 cut(s) 244
FaeI CATG 4 cut(s) 352, 499, 622, 688
FaiI YATR 5 cut(s) 142, 350, 497, 620, 686
FaqI GGGAC 4 cut(s) 653, 931, 943, 1145
FatI CATG 4 cut(s) 348, 495, 618, 684
FauI CCCGC 2 cut(s) 785, 789
FblI GTMKAC 3 cut(s) 264, 360, 975
FokI GGATG 5 cut(s) 32, 103, 731, 1197, 1337
GlaI GCGC 4 cut(s) 244, 378, 842, 1187
GsaI CCCAGC 2 cut(s) 626, 731
HaeII RGCGCY 2 cut(s) 246, 380
HaeIII GGCC 4 cut(s) 305, 1037, 1122, 1313
HgaI GACGC 2 cut(s) 104, 1306
HhaI GCGC 4 cut(s) 245, 379, 843, 1188
Hin1I GRCGYC 3 cut(s) 243, 1200, 1298
Hin1II CATG 4 cut(s) 352, 499, 622, 688
Hin6I GCGC 4 cut(s) 243, 377, 841, 1186
HinP1I GCGC 4 cut(s) 243, 377, 841, 1186
HincII GTYRAC 2 cut(s) 361, 976
HindII GTYRAC 2 cut(s) 361, 976
HinfI GANTC 7 cut(s) 14, 40, 290, 320, 627, 737, 746
HphI GGTGA 5 cut(s) 35, 146, 732, 793, 883
Hpy166II GTNNAC 5 cut(s) 34, 265, 361, 774, 976
Hpy188I TCNGA 8 cut(s) 19, 121, 166, 281, 668, 673, 694, 718
Hpy188III TCNNGA 6 cut(s) 311, 317, 850, 916, 1130, 1204
Hpy8I GTNNAC 5 cut(s) 34, 265, 361, 774, 976
Hpy99I CGWCG 7 cut(s) 98, 362, 881, 917, 977, 1300, 1351
HpyAV CCTTC 5 cut(s) 382, 817, 919, 1113, 1278
HpyCH4III ACNGT 4 cut(s) 47, 262, 677, 1248
HpyCH4IV ACGT 3 cut(s) 657, 930, 1200
HpyCH4V TGCA 4 cut(s) 273, 489, 722, 774
HpyF10VI GCNNNNNNNGC 9 cut(s) 63, 72, 78, 81, 179, 240, 255, 513, 728
HpyF3I CTNAG 2 cut(s) 278, 691
HpySE526I ACGT 3 cut(s) 657, 930, 1200
Hsp92I GRCGYC 3 cut(s) 243, 1200, 1298
Hsp92II CATG 4 cut(s) 352, 499, 622, 688
HspAI GCGC 4 cut(s) 243, 377, 841, 1186
KasI GGCGCC 1 cut(s) 242
KflI GGGWCCC 2 cut(s) 918, 957
KroI GCCGGC 1 cut(s) 245
KroNI GCCGGC 1 cut(s) 247
Kzo9I GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
LguI GCTCTTC 1 cut(s) 878
LmnI GCTCC 5 cut(s) 164, 194, 391, 512, 1190
Lsp1109I GCAGC 5 cut(s) 84, 85, 571, 764, 806
LweI GCATC 5 cut(s) 246, 498, 709, 1219, 1236
MaeII ACGT 3 cut(s) 657, 930, 1200
MaeIII GTNAC 5 cut(s) 41, 677, 889, 931, 1061
MalI GATC 7 cut(s) 309, 315, 419, 670, 1013, 1253, 1268
MbiI CCGCTC 1 cut(s) 159
MboI GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
MboII GAAGA 6 cut(s) 315, 321, 394, 397, 865, 1210
MflI RGATCY 2 cut(s) 313, 417
MhlI GDGCHC 3 cut(s) 716, 776, 1023
Mly113I GGCGCC 1 cut(s) 243
MlyI GAGTC 4 cut(s) 49, 284, 329, 740
MmeI TCCRAC 4 cut(s) 144, 189, 585, 846
MreI CGCCGGCG 1 cut(s) 245
MroNI GCCGGC 1 cut(s) 245
MseI TTAA 1 cut(s) 1082
MslI CAYNNNNRTG 1 cut(s) 494
MspA1I CMGCKG 1 cut(s) 1196
MspR9I CCNGG 6 cut(s) 898, 1144, 1163, 1271, 1272, 1310
MvaI CCWGG 2 cut(s) 898, 1310
MvnI CGCG 6 cut(s) 104, 128, 216, 841, 1034, 1188
MwoI GCNNNNNNNGC 9 cut(s) 63, 72, 78, 81, 179, 240, 255, 513, 728
NaeI GCCGGC 1 cut(s) 247
NarI GGCGCC 1 cut(s) 243
NciI CCSGG 4 cut(s) 1144, 1163, 1271, 1272
NdeII GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
NgoMIV GCCGGC 1 cut(s) 245
NlaIII CATG 4 cut(s) 352, 499, 622, 688
NmeAIII GCCGAG 2 cut(s) 427, 487
NmuCI GTSAC 4 cut(s) 41, 677, 889, 931
NspI RCATGY 1 cut(s) 622
NspV TTCGAA 1 cut(s) 468
PaeR7I CTCGAG 1 cut(s) 37
PciSI GCTCTTC 1 cut(s) 878
PcsI WCGNNNNNNNCGW 6 cut(s) 246, 332, 465, 767, 921, 969
PdiI GCCGGC 1 cut(s) 247
PfeI GAWTC 3 cut(s) 14, 627, 737
PflMI CCANNNNNTGG 1 cut(s) 622
PinAI ACCGGT 1 cut(s) 886
PleI GAGTC 4 cut(s) 48, 284, 328, 740
PluTI GGCGCC 1 cut(s) 246
PpsI GAGTC 4 cut(s) 48, 284, 328, 740
Ppu21I YACGTR 1 cut(s) 931
PpuMI RGGWCCY 5 cut(s) 640, 918, 957, 1132, 1159
Psp5II RGGWCCY 5 cut(s) 640, 918, 957, 1132, 1159
Psp6I CCWGG 2 cut(s) 896, 1308
PspEI GGTNACC 1 cut(s) 889
PspFI CCCAGC 2 cut(s) 622, 727
PspGI CCWGG 2 cut(s) 896, 1308
PspPI GGNCC 9 cut(s) 640, 847, 918, 957, 1036, 1120, 1132, 1159, 1165
PspPPI RGGWCCY 5 cut(s) 640, 918, 957, 1132, 1159
PspXI VCTCGAGB 1 cut(s) 37
PsuI RGATCY 2 cut(s) 313, 417
RsaI GTAC 3 cut(s) 503, 929, 1245
RsaNI GTAC 3 cut(s) 502, 928, 1244
RseI CAYNNNNRTG 1 cut(s) 494
SalI GTCGAC 2 cut(s) 359, 974
SapI GCTCTTC 1 cut(s) 878
SaqAI TTAA 1 cut(s) 1082
Sau3AI GATC 7 cut(s) 307, 313, 417, 668, 1011, 1251, 1266
Sau96I GGNCC 9 cut(s) 640, 847, 918, 957, 1036, 1120, 1132, 1159, 1165
ScaI AGTACT 1 cut(s) 503
SchI GAGTC 4 cut(s) 49, 284, 329, 740
ScrFI CCNGG 6 cut(s) 898, 1144, 1163, 1271, 1272, 1310
SduI GDGCHC 3 cut(s) 716, 776, 1023
SfaNI GCATC 5 cut(s) 246, 498, 709, 1219, 1236
SfcI CTRYAG 1 cut(s) 67
SfoI GGCGCC 1 cut(s) 244
Sfr274I CTCGAG 1 cut(s) 37
SfuI TTCGAA 1 cut(s) 468
SgrAI CRCCGGYG 1 cut(s) 245
SinI GGWCC 7 cut(s) 640, 847, 918, 957, 1132, 1159, 1165
SlaI CTCGAG 1 cut(s) 37
SmaI CCCGGG 1 cut(s) 1272
SmiMI CAYNNNNRTG 1 cut(s) 494
SmlI CTYRAG 3 cut(s) 37, 146, 1115
SmoI CTYRAG 3 cut(s) 37, 146, 1115
SspDI GGCGCC 1 cut(s) 242
StyD4I CCNGG 6 cut(s) 896, 1142, 1161, 1269, 1270, 1308
TaaI ACNGT 4 cut(s) 47, 262, 677, 1248
TaiI ACGT 3 cut(s) 660, 933, 1203
TatI WGTACW 1 cut(s) 501
TauI GCSGC 8 cut(s) 84, 104, 131, 237, 516, 1037, 1196, 1261
TfiI GAWTC 3 cut(s) 14, 627, 737
Tru1I TTAA 1 cut(s) 1082
Tru9I TTAA 1 cut(s) 1082
TscAI CASTG 1 cut(s) 64
TseFI GTSAC 4 cut(s) 41, 677, 889, 931
TseI GCWGC 5 cut(s) 72, 98, 584, 752, 794
Tsp45I GTSAC 4 cut(s) 41, 677, 889, 931
TspDTI ATGAA 1 cut(s) 365
TspGWI ACGGA 2 cut(s) 978, 1203
TspMI CCCGGG 1 cut(s) 1270
TspRI CASTG 1 cut(s) 64
Van91I CCANNNNNTGG 1 cut(s) 622
VneI GTGCAC 1 cut(s) 772
VpaK11BI GGWCC 7 cut(s) 640, 847, 918, 957, 1132, 1159, 1165
XagI CCTNNNNNAGG 1 cut(s) 1154
XceI RCATGY 1 cut(s) 622
XhoI CTCGAG 1 cut(s) 37
XmaI CCCGGG 1 cut(s) 1270
XmiI GTMKAC 3 cut(s) 264, 360, 975
ZraI GACGTC 1 cut(s) 1201
ZrmI AGTACT 1 cut(s) 503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.