Rh5DG118000

Protein kinase PINOID-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0012958
Physical Location & Seq
Reverse (-)
10666924 .. 10669387
2464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG118000.1

Sequence Viewer

Length: 1374 bp
ATGTTAGAGCTTGGTCCGATTACTACTACTACTCTCGCGCGTGATTCAGACAGTTCAATGAGTAGTGACACCTGTAGCAGTTTTAGCCGCCTCTCCTTCGACGCAACCACCACCTTAACCGCCGCAACCGACTTCTTCGGCACCGAGAATCTCGCCCTCAAGCCGCACCGCTCCTCCGACTTCGCCTACTCCGTCATTCGCTCCAAGAAATCCTCCCTCACTTACCGCGACTTCCGGCTGCACCGCCGCATCGGCTCCGGCGACATCGGCACCGTCTACCTCTGCAGCCTCCGCAGTCTCGACTCCGACTCATCATCATCATCCTCAACCTCATGCGTCTACGCCATGAAAGTCGTCGACAAGGAGGCCTTGGCCCTCAAGAAGAAGGAGCCCAGAGCCGAGATGGAGCGCAAGATCCTCAAAATGCTTGACCACCCTTTCCTCCCCACACTTTACGCCGAGTTCGAGGCCTCGCATTTCTCCTGCATCGTCATGGAGTACTGCTCCGGTGGCGACTTGCACTCCCTCCGCCATAAACAGCCTAACCGCCGCTTCTCTCTCAGCTCCGCAAGGTTCTACGCTGCTGAGGTCCTGGTGGCTTTGGAGTACCTCCACATGTTGGGAATCATCTACAGAGACCTGAAGCCGGAGAACGTGCTCGTTAGATCCGACGGTCACATCATGCTCTCCGACTTTGACCTCTCTCTCTGCTCCGACGCAATCCCCGCCGTTGAGTCACCCGACTCCTCTCCGGTTCTAGAGTCCATCTCAACTCCATCGTACGCCCGCCCCCACCCGAGCACTCTCACTCCCTTCTCCTGCCTCTCAAACCGGCTGTTCCGGTCGAGAAAGGTGCAGACTTTGTCGCCGAACCGCCTCTTCGTGGCTGAGCCGGTCGCCGCCCGGTCATGCTCGTTCGTCGGGACCCACGAGTACGTGGCGCCGGAGGTTGCTTCCGGTAGGTCCCACGGCAACGCGGTTGACTGGTGGGCGTTTGGGATCTTCCTCTACGAGATGATCTACGGGCGGACGCCGTTTGCGGCTCCATCGAACGAGACTACACTGCGAAGCATCGTGAAAAGTCCCTTAACCTTCCCGACGTCCACGCCCTGCAGCGCGCTTGAGGGCCACGCGCGGGACCTGATATCCGGGTTTCTGAACAAGGACCCGGAGCGGCGGCTCGGGTCGAAGCGCGGCGCTGCTGACGTCAAGAAGCATGCTTTCTTCAAGGGGATCAACTTGGCGTTGATACGGTCGCTGCGGCCGCCGATGGTCCCGGGTCTGAGAAGGCAGAACACGACGCCGTTTTACCACGCCAAGTCTGATGATCAGAATAAAAATAACGGACAGTCTGGGGCGTTCGATTACTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009986 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0010154 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0080167 GO:0090558 GO:0090567 GO:0090627 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000012
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

457

Amino Acids

50.74

Weight (kDa)

8.93

Isoelectric Point (pI)

54.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 79 - 235 3.9e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 79 - 235 5.1e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 303 - 409 1.1e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 311 - 393 5.1e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012958)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34650
fragaria_vesca FvH4_3g09660
malus_domestica MD00G1109900.v1.1 MD05G1276300.v1.1
prunus_persica Prupe.4G088000_v2.0.a1 Prupe.4G088000_v2.0.a1
pyrus_communis pycom05g25730 pycom10g21130
rosa_chinensis RchiOBHm_Chr5g0015331
rosa_laevigata RLG00000032193
rosa_multiflora Rmu_co8298181.1_g000001
rosa_roxburghii Rroxscaffold_1G00061120
rosa_rugosa Rorug05G0026700
rosa_samantha Rh5AG120200 Rh5BG119100 Rh5CG129600 Rh5DG118000
rosa_wichuraiana Rw5G010390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1103, 1209
AccB1I GGYRCC 3 cut(s) 140, 269, 940
AccB7I CCANNNNNTGG 1 cut(s) 619
AccBSI CCGCTC 2 cut(s) 171, 1174
AccI GTMKAC 3 cut(s) 276, 339, 357
AccII CGCG 8 cut(s) 38, 40, 228, 977, 1118, 1133, 1135, 1194
AclWI GGATC 4 cut(s) 409, 660, 1007, 1241
AcoI YGGCCR 1 cut(s) 1262
AcuI CTGAAG 1 cut(s) 662
AcyI GRCGYC 5 cut(s) 941, 1031, 1100, 1206, 1301
AfaI GTAC 4 cut(s) 500, 608, 782, 935
AfiI CCNNNNNNNGG 4 cut(s) 619, 646, 883, 1135
AflIII ACRYGT 1 cut(s) 615
AgsI TTSAA 2 cut(s) 57, 1228
AjnI CCWGG 1 cut(s) 591
AluBI AGCT 2 cut(s) 10, 564
AluI AGCT 2 cut(s) 10, 564
Alw21I GWGCWC 2 cut(s) 660, 803
Alw26I GTCTC 3 cut(s) 302, 630, 1049
AlwI GGATC 4 cut(s) 409, 660, 1007, 1241
Ama87I CYCGRG 3 cut(s) 796, 1181, 1276
AoxI GGCC 5 cut(s) 366, 372, 468, 1126, 1262
ApeKI GCWGC 6 cut(s) 238, 285, 581, 1113, 1199, 1258
AspLEI GCGC 8 cut(s) 40, 411, 943, 1118, 1120, 1135, 1194, 1199
AspS9I GGNCC 9 cut(s) 14, 373, 589, 924, 963, 1126, 1138, 1165, 1273
AsuC2I CCSGG 5 cut(s) 904, 1150, 1169, 1277, 1278
AsuHPI GGTGA 1 cut(s) 729
AvaI CYCGRG 3 cut(s) 796, 1181, 1276
AvaII GGWCC 7 cut(s) 14, 589, 924, 963, 1138, 1165, 1273
BanI GGYRCC 3 cut(s) 140, 269, 940
BanII GRGCYC 1 cut(s) 393
BauI CACGAG 1 cut(s) 929
Bbv12I GWGCWC 2 cut(s) 660, 803
BbvCI CCTCAGC 1 cut(s) 585
BbvI GCAGC 6 cut(s) 225, 297, 568, 1125, 1186, 1245
BccI CCATC 5 cut(s) 397, 773, 784, 1054, 1264
BceAI ACGGC 4 cut(s) 713, 985, 1018, 1288
BcgI CGANNNNNNTGC 2 cut(s) 835, 869
BciT130I CCWGG 1 cut(s) 593
BclI TGATCA 1 cut(s) 1327
BcnI CCSGG 5 cut(s) 904, 1150, 1169, 1277, 1278
BcoDI GTCTC 3 cut(s) 302, 630, 1049
BfaI CTAG 1 cut(s) 758
BfmI CTRYAG 4 cut(s) 73, 283, 631, 1111
BfoI RGCGCY 2 cut(s) 944, 1200
BglI GCCNNNNNGGC 1 cut(s) 252
BlpI GCTNAGC 1 cut(s) 888
BmcAI AGTACT 1 cut(s) 500
Bme1390I CCNGG 6 cut(s) 593, 904, 1150, 1169, 1277, 1278
Bme18I GGWCC 7 cut(s) 14, 589, 924, 963, 1138, 1165, 1273
BmeT110I CYCGRG 3 cut(s) 796, 1181, 1276
BmgT120I GGNCC 9 cut(s) 14, 373, 589, 924, 963, 1126, 1138, 1165, 1273
BmrFI CCNGG 6 cut(s) 593, 904, 1150, 1169, 1277, 1278
BmsI GCATC 3 cut(s) 258, 495, 1080
BplI GAGNNNNNCTC 4 cut(s) 488, 520, 752, 784
Bpu10I CCTNAGC 1 cut(s) 585
Bpu1102I GCTNAGC 1 cut(s) 888
BpuEI CTTGAG 3 cut(s) 143, 362, 1142
BpuMI CCSGG 5 cut(s) 904, 1150, 1169, 1277, 1278
BsaAI YACGTR 1 cut(s) 937
BsaHI GRCGYC 5 cut(s) 941, 1031, 1100, 1206, 1301
BsaI GGTCTC 1 cut(s) 630
BsaJI CCNNGG 3 cut(s) 369, 967, 1276
BsaWI WCCGGW 4 cut(s) 506, 751, 840, 956
BsaXI ACNNNNNCTCC 6 cut(s) 158, 188, 506, 536, 793, 823
Bsc4I CCNNNNNNNGG 4 cut(s) 619, 646, 883, 1135
Bse118I RCCGGY 2 cut(s) 831, 892
Bse1I ACTGG 1 cut(s) 989
BseBI CCWGG 1 cut(s) 593
BseDI CCNNGG 3 cut(s) 369, 967, 1276
BseGI GGATG 1 cut(s) 320
BseLI CCNNNNNNNGG 4 cut(s) 619, 646, 883, 1135
BseMII CTCAG 4 cut(s) 574, 576, 879, 1274
BseNI ACTGG 1 cut(s) 989
BsePI GCGCGC 1 cut(s) 1116
BseRI GAGGAG 2 cut(s) 163, 736
BseX3I CGGCCG 1 cut(s) 1262
BseXI GCAGC 6 cut(s) 225, 297, 568, 1125, 1186, 1245
BsgI GTGCAG 2 cut(s) 224, 875
Bsh1236I CGCG 8 cut(s) 38, 40, 228, 977, 1118, 1133, 1135, 1194
Bsh1285I CGRYCG 4 cut(s) 845, 897, 1256, 1265
BshFI GGCC 5 cut(s) 368, 374, 470, 1128, 1264
BshNI GGYRCC 3 cut(s) 140, 269, 940
BsiEI CGRYCG 4 cut(s) 845, 897, 1256, 1265
BsiHKAI GWGCWC 2 cut(s) 660, 803
BsiHKCI CYCGRG 3 cut(s) 796, 1181, 1276
BsiWI CGTACG 1 cut(s) 780
BslFI GGGAC 5 cut(s) 937, 949, 1068, 1151, 1259
BslI CCNNNNNNNGG 4 cut(s) 619, 646, 883, 1135
BsmAI GTCTC 3 cut(s) 302, 630, 1049
BsmFI GGGAC 5 cut(s) 937, 949, 1068, 1151, 1259
BsnI GGCC 5 cut(s) 368, 374, 470, 1128, 1264
Bso31I GGTCTC 1 cut(s) 630
BsoBI CYCGRG 3 cut(s) 796, 1181, 1276
Bsp1286I GDGCHC 3 cut(s) 393, 660, 803
Bsp143I GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
Bsp1720I GCTNAGC 1 cut(s) 888
BspANI GGCC 5 cut(s) 368, 374, 470, 1128, 1264
BspCNI CTCAG 4 cut(s) 573, 577, 880, 1275
BspFNI CGCG 8 cut(s) 38, 40, 228, 977, 1118, 1133, 1135, 1194
BspMAI CTGCAG 2 cut(s) 287, 1115
BspPI GGATC 4 cut(s) 409, 660, 1007, 1241
BspT107I GGYRCC 3 cut(s) 140, 269, 940
BspTNI GGTCTC 1 cut(s) 630
BsrBI CCGCTC 2 cut(s) 171, 1174
BsrFI RCCGGY 2 cut(s) 831, 892
BsrI ACTGG 1 cut(s) 989
BssAI RCCGGY 2 cut(s) 831, 892
BssECI CCNNGG 3 cut(s) 369, 967, 1276
BssHII GCGCGC 1 cut(s) 1116
BssMI GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
BssNI GRCGYC 5 cut(s) 941, 1031, 1100, 1206, 1301
BssSI CACGAG 1 cut(s) 929
BssT1I CCWWGG 1 cut(s) 369
Bst2BI CACGAG 1 cut(s) 929
Bst2UI CCWGG 1 cut(s) 593
Bst4CI ACNGT 5 cut(s) 53, 274, 674, 1254, 1350
Bst6I CTCTTC 1 cut(s) 884
BstACI GRCGYC 5 cut(s) 941, 1031, 1100, 1206, 1301
BstBAI YACGTR 1 cut(s) 937
BstC8I GCNNGC 3 cut(s) 787, 1118, 1218
BstDEI CTNAG 4 cut(s) 560, 585, 888, 1283
BstDSI CCRYGG 1 cut(s) 967
BstF5I GGATG 1 cut(s) 320
BstFNI CGCG 8 cut(s) 38, 40, 228, 977, 1118, 1133, 1135, 1194
BstH2I RGCGCY 2 cut(s) 944, 1200
BstHHI GCGC 8 cut(s) 40, 411, 943, 1118, 1120, 1135, 1194, 1199
BstKTI GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
BstMAI GTCTC 3 cut(s) 302, 630, 1049
BstMBI GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
BstMCI CGRYCG 4 cut(s) 845, 897, 1256, 1265
BstMWI GCNNNNNNNGC 7 cut(s) 84, 252, 267, 291, 510, 725, 1264
BstNI CCWGG 1 cut(s) 593
BstNSI RCATGY 2 cut(s) 619, 1220
BstSCI CCNGG 6 cut(s) 591, 902, 1148, 1167, 1275, 1276
BstSFI CTRYAG 4 cut(s) 73, 283, 631, 1111
BstUI CGCG 8 cut(s) 38, 40, 228, 977, 1118, 1133, 1135, 1194
BstV1I GCAGC 6 cut(s) 225, 297, 568, 1125, 1186, 1245
BstX2I RGATCY 3 cut(s) 414, 665, 999
BstYI RGATCY 3 cut(s) 414, 665, 999
BstZI CGGCCG 1 cut(s) 1262
BsuRI GGCC 5 cut(s) 368, 374, 470, 1128, 1264
BtgI CCRYGG 1 cut(s) 967
BtsCI GGATG 1 cut(s) 320
BtsI GCAGTG 1 cut(s) 1061
BtsIMutI CAGTG 1 cut(s) 1061
Cac8I GCNNGC 3 cut(s) 787, 1118, 1218
CciNI GCGGCCGC 1 cut(s) 1262
CfoI GCGC 8 cut(s) 40, 411, 943, 1118, 1120, 1135, 1194, 1199
Cfr10I RCCGGY 2 cut(s) 831, 892
Cfr13I GGNCC 9 cut(s) 14, 373, 589, 924, 963, 1126, 1138, 1165, 1273
Cfr9I CCCGGG 1 cut(s) 1276
CseI GACGC 5 cut(s) 110, 325, 725, 1039, 1309
Csp6I GTAC 4 cut(s) 499, 607, 781, 934
CviAII CATG 7 cut(s) 333, 346, 493, 616, 682, 909, 1217
CviQI GTAC 4 cut(s) 499, 607, 781, 934
DdeI CTNAG 4 cut(s) 560, 585, 888, 1283
DinI GGCGCC 1 cut(s) 942
DpnI GATC 6 cut(s) 416, 667, 1001, 1019, 1235, 1329
DpnII GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
EaeI YGGCCR 1 cut(s) 1262
EagI CGGCCG 1 cut(s) 1262
Eam1104I CTCTTC 1 cut(s) 884
EarI CTCTTC 1 cut(s) 884
EciI GGCGGA 2 cut(s) 518, 1042
EclXI CGGCCG 1 cut(s) 1262
Eco130I CCWWGG 1 cut(s) 369
Eco147I AGGCCT 2 cut(s) 368, 470
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 1 cut(s) 630
Eco32I GATATC 1 cut(s) 1146
Eco47I GGWCC 7 cut(s) 14, 589, 924, 963, 1138, 1165, 1273
Eco52I CGGCCG 1 cut(s) 1262
Eco57I CTGAAG 1 cut(s) 662
Eco88I CYCGRG 3 cut(s) 796, 1181, 1276
EcoO109I RGGNCCY 5 cut(s) 589, 924, 963, 1138, 1165
EcoRII CCWGG 1 cut(s) 591
EcoRV GATATC 1 cut(s) 1146
EcoT14I CCWWGG 1 cut(s) 369
EcoT38I GRGCYC 1 cut(s) 393
EgeI GGCGCC 1 cut(s) 942
EheI GGCGCC 1 cut(s) 942
ErhI CCWWGG 1 cut(s) 369
FaeI CATG 7 cut(s) 336, 349, 496, 619, 685, 912, 1220
FaiI YATR 8 cut(s) 334, 347, 494, 534, 617, 683, 910, 1218
FalI AAGNNNNNCTT 2 cut(s) 353, 385
FaqI GGGAC 5 cut(s) 937, 949, 1068, 1151, 1259
FatI CATG 7 cut(s) 332, 345, 492, 615, 681, 908, 1216
FauI CCCGC 3 cut(s) 733, 794, 1128
FbaI TGATCA 1 cut(s) 1327
FblI GTMKAC 3 cut(s) 276, 339, 357
FokI GGATG 1 cut(s) 307
FriOI GRGCYC 1 cut(s) 393
FspBI CTAG 1 cut(s) 758
GlaI GCGC 8 cut(s) 39, 410, 942, 1117, 1119, 1134, 1193, 1198
HaeII RGCGCY 2 cut(s) 944, 1200
HaeIII GGCC 5 cut(s) 368, 374, 470, 1128, 1264
HgaI GACGC 5 cut(s) 110, 325, 725, 1039, 1309
HhaI GCGC 8 cut(s) 40, 411, 943, 1118, 1120, 1135, 1194, 1199
Hin1I GRCGYC 5 cut(s) 941, 1031, 1100, 1206, 1301
Hin1II CATG 7 cut(s) 336, 349, 496, 619, 685, 912, 1220
Hin6I GCGC 8 cut(s) 38, 409, 941, 1116, 1118, 1133, 1192, 1197
HinP1I GCGC 8 cut(s) 38, 409, 941, 1116, 1118, 1133, 1192, 1197
HincII GTYRAC 2 cut(s) 358, 982
HindII GTYRAC 2 cut(s) 358, 982
HinfI GANTC 8 cut(s) 44, 148, 302, 308, 624, 734, 743, 761
HphI GGTGA 1 cut(s) 729
Hpy166II GTNNAC 5 cut(s) 277, 340, 358, 982, 1104
Hpy188III TCNNGA 8 cut(s) 299, 379, 758, 846, 922, 1075, 1096, 1210
Hpy8I GTNNAC 5 cut(s) 277, 340, 358, 982, 1104
Hpy99I CGWCG 7 cut(s) 104, 359, 674, 719, 923, 1102, 1303
HpyAV CCTTC 5 cut(s) 106, 379, 823, 1102, 1281
HpyCH4III ACNGT 5 cut(s) 53, 274, 674, 1254, 1350
HpyCH4IV ACGT 4 cut(s) 654, 936, 1100, 1206
HpyCH4V TGCA 6 cut(s) 241, 285, 486, 520, 856, 1113
HpyF10VI GCNNNNNNNGC 7 cut(s) 84, 252, 267, 291, 510, 725, 1264
HpyF3I CTNAG 4 cut(s) 560, 585, 888, 1283
HpySE526I ACGT 4 cut(s) 654, 936, 1100, 1206
Hsp92I GRCGYC 5 cut(s) 941, 1031, 1100, 1206, 1301
Hsp92II CATG 7 cut(s) 336, 349, 496, 619, 685, 912, 1220
HspAI GCGC 8 cut(s) 38, 409, 941, 1116, 1118, 1133, 1192, 1197
KasI GGCGCC 1 cut(s) 940
KflI GGGWCCC 1 cut(s) 924
Ksp22I TGATCA 1 cut(s) 1327
Kzo9I GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
Lsp1109I GCAGC 6 cut(s) 225, 297, 568, 1125, 1186, 1245
LweI GCATC 3 cut(s) 258, 495, 1080
MaeI CTAG 1 cut(s) 758
MaeII ACGT 4 cut(s) 654, 936, 1100, 1206
MaeIII GTNAC 3 cut(s) 65, 674, 735
MalI GATC 6 cut(s) 416, 667, 1001, 1019, 1235, 1329
MbiI CCGCTC 2 cut(s) 171, 1174
MboI GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
MboII GAAGA 5 cut(s) 127, 394, 871, 994, 1216
MflI RGATCY 3 cut(s) 414, 665, 999
MhlI GDGCHC 3 cut(s) 393, 660, 803
Mly113I GGCGCC 1 cut(s) 941
MlyI GAGTC 5 cut(s) 296, 302, 737, 743, 770
MmeI TCCRAC 5 cut(s) 201, 330, 693, 714, 738
MseI TTAA 2 cut(s) 116, 1088
MslI CAYNNNNRTG 1 cut(s) 491
MspR9I CCNGG 6 cut(s) 593, 904, 1150, 1169, 1277, 1278
MteI GCGCNGCGC 1 cut(s) 1195
MvaI CCWGG 1 cut(s) 593
MvnI CGCG 8 cut(s) 38, 40, 228, 977, 1118, 1133, 1135, 1194
MwoI GCNNNNNNNGC 7 cut(s) 84, 252, 267, 291, 510, 725, 1264
NarI GGCGCC 1 cut(s) 941
NciI CCSGG 5 cut(s) 904, 1150, 1169, 1277, 1278
NdeII GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
NlaIII CATG 7 cut(s) 336, 349, 496, 619, 685, 912, 1220
NmeAIII GCCGAG 2 cut(s) 424, 484
NmuCI GTSAC 3 cut(s) 65, 674, 735
NotI GCGGCCGC 1 cut(s) 1262
NspI RCATGY 2 cut(s) 619, 1220
PaeI GCATGC 1 cut(s) 1220
PauI GCGCGC 1 cut(s) 1116
PceI AGGCCT 2 cut(s) 368, 470
PciI ACATGT 1 cut(s) 615
PcsI WCGNNNNNNNCGW 5 cut(s) 189, 258, 462, 666, 927
PfeI GAWTC 3 cut(s) 44, 148, 624
Pfl23II CGTACG 1 cut(s) 780
PflFI GACNNNGTC 1 cut(s) 862
PflMI CCANNNNNTGG 1 cut(s) 619
PleI GAGTC 5 cut(s) 296, 302, 737, 742, 769
PluTI GGCGCC 1 cut(s) 944
PpsI GAGTC 5 cut(s) 296, 302, 737, 742, 769
Ppu21I YACGTR 1 cut(s) 937
PpuMI RGGWCCY 5 cut(s) 589, 924, 963, 1138, 1165
PscI ACATGT 1 cut(s) 615
Psp5II RGGWCCY 5 cut(s) 589, 924, 963, 1138, 1165
Psp6I CCWGG 1 cut(s) 591
PspGI CCWGG 1 cut(s) 591
PspLI CGTACG 1 cut(s) 780
PspPI GGNCC 9 cut(s) 14, 373, 589, 924, 963, 1126, 1138, 1165, 1273
PspPPI RGGWCCY 5 cut(s) 589, 924, 963, 1138, 1165
PstI CTGCAG 2 cut(s) 287, 1115
PsuI RGATCY 3 cut(s) 414, 665, 999
PsyI GACNNNGTC 1 cut(s) 862
PteI GCGCGC 1 cut(s) 1116
RsaI GTAC 4 cut(s) 500, 608, 782, 935
RsaNI GTAC 4 cut(s) 499, 607, 781, 934
RseI CAYNNNNRTG 1 cut(s) 491
SalI GTCGAC 1 cut(s) 356
SaqAI TTAA 2 cut(s) 116, 1088
Sau3AI GATC 6 cut(s) 414, 665, 999, 1017, 1233, 1327
Sau96I GGNCC 9 cut(s) 14, 373, 589, 924, 963, 1126, 1138, 1165, 1273
ScaI AGTACT 1 cut(s) 500
SchI GAGTC 5 cut(s) 296, 302, 737, 743, 770
ScrFI CCNGG 6 cut(s) 593, 904, 1150, 1169, 1277, 1278
SduI GDGCHC 3 cut(s) 393, 660, 803
SfaNI GCATC 3 cut(s) 258, 495, 1080
SfcI CTRYAG 4 cut(s) 73, 283, 631, 1111
SfoI GGCGCC 1 cut(s) 942
SinI GGWCC 7 cut(s) 14, 589, 924, 963, 1138, 1165, 1273
SmaI CCCGGG 1 cut(s) 1278
SmiMI CAYNNNNRTG 1 cut(s) 491
SmlI CTYRAG 3 cut(s) 158, 377, 1121
SmoI CTYRAG 3 cut(s) 158, 377, 1121
SphI GCATGC 1 cut(s) 1220
SseBI AGGCCT 2 cut(s) 368, 470
SspDI GGCGCC 1 cut(s) 940
SspMI CTAG 1 cut(s) 758
StuI AGGCCT 2 cut(s) 368, 470
StyD4I CCNGG 6 cut(s) 591, 902, 1148, 1167, 1275, 1276
StyI CCWWGG 1 cut(s) 369
TaaI ACNGT 5 cut(s) 53, 274, 674, 1254, 1350
TaiI ACGT 4 cut(s) 657, 939, 1103, 1209
TaqI TCGA 8 cut(s) 99, 300, 357, 465, 845, 1049, 1187, 1362
TatI WGTACW 1 cut(s) 498
TfiI GAWTC 3 cut(s) 44, 148, 624
Tru1I TTAA 2 cut(s) 116, 1088
Tru9I TTAA 2 cut(s) 116, 1088
TscAI CASTG 1 cut(s) 1068
TseFI GTSAC 3 cut(s) 65, 674, 735
TseI GCWGC 6 cut(s) 238, 285, 581, 1113, 1199, 1258
Tsp45I GTSAC 3 cut(s) 65, 674, 735
TspDTI ATGAA 1 cut(s) 362
TspGWI ACGGA 2 cut(s) 181, 1359
TspMI CCCGGG 1 cut(s) 1276
TspRI CASTG 1 cut(s) 1068
Tth111I GACNNNGTC 1 cut(s) 862
Van91I CCANNNNNTGG 1 cut(s) 619
VpaK11BI GGWCC 7 cut(s) 14, 589, 924, 963, 1138, 1165, 1273
XbaI TCTAGA 1 cut(s) 757
XceI RCATGY 2 cut(s) 619, 1220
XcmI CCANNNNNNNNNTGG 1 cut(s) 400
XmaI CCCGGG 1 cut(s) 1276
XmiI GTMKAC 3 cut(s) 276, 339, 357
XspI CTAG 1 cut(s) 758
ZraI GACGTC 2 cut(s) 1101, 1207
ZrmI AGTACT 1 cut(s) 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.