RchiOBHm_Chr5g0015331

Protein kinase PINOID-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0012958
Physical Location & Seq
Reverse (-)
10600251 .. 10602705
2455 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29575

Sequence Viewer

Length: 1377 bp
ATGTTAGAGCTTGGTCCGATTAGTACTACTCTCGCGCGTGATTCAGACAGTTCAATGAGTAGTGACACCTGTAGCAGTTTTAGCCGCCTCTCCTTCGACGCAACCACCACCTTAACCGCCGCAACCGACTTCTTCGGCACCGAGAATCTCGCCCTCAAGCCACACCGCTCCTCCGACTTCGCCTACTCGGTCATTCGCTCCAAGAAATCCGCCCTCACTTACCGCGACTTCAGCCTCCACCGCCGCATCGGCTCCGGCGACATCGGCACCGTCTACCTCTGCAGCCTCCGCAGTCCCGACTCCGACTCATCATCATCATCCTCATCCTCAACCTCATGCGTCTACGCCATGAAAGTCGTCGACAAGGAGGCCTTGGCCCTCAAGAAGAAGGAGCCCAGAGCCGAGATGGAGCGCAAGATCCTCAAAATGCTTGACCACCCTTTCCTCCCGACTCTCTACGCCGAGTTCGAGGCCTCGCATTTCTCCTGCATCGTCATGGAGTACTGCTCCGGCGGCGACTTGCACTCCCTCCGCCATAAACAGCCTAACCGCCGCTTCTCCCTCAGCTCCGCAAGGTTCTACGCTGCTGAGGTCCTGGTGGCTTTGGAGTACCTCCACATGTTGGGAATCATCTACAGAGACCTGAAGCCGGAGAACGTGCTCGTCAGATCCGACGGTCACATCATGCTCTCCGACTTTGACCTCTCTCTCTGCTCCGACGCAATCCCCGCCGTTGAGTCACCCGACTCCTCTCCGGTTCCAGAGTCCATCTCAACCCCATCGTACGCCCGCCCCCGCCCGAGCACTCTCACTCCCTTCTCCTGCCTCTCAAACCGGCTGTTCCGGTCGAGAAAGGTTCAGACTTTGTCGCCGAACCGCCTCTTCGTGGCTGAGCCGGTCGCCGCCCGGTCATGCTCGTTCGTCGGGACCCACGAGTACGTGGCGCCGGAGGTTGCTTCCGGTAGGTCCCACGGCAACGCGGTTGACTGGTGGGCGTTTGGGATCTTCCTCTACGAGATGATCTACGGGCGGACGCCGTTTGCGGCTCCATCGAACGAGACTACACTGCGAAGCATCGTGAAAAGTCCCTTAACCTTCCCGACGTCCACGCCCTGCAGCGCGCTTGAGGGCCACGCGCGGGACCTGATATCCGGGTTTCTGAACAAGGACCCGGAGCGGCGGCTCGGGTCGAAGCGCGGCGCTGCTGACGTCAAGAAGCATCCTTTCTTCAAGGGGATCAACTTGGCGTTGATACGGTCGCTGCGGCCGCCGATGGTCCCGGGTCTGAGAAGGCAGAACACGACGCCGTTTTGCCACGCCAAGTCGGATGATCAGAATAAAAATAACGGACAGTCTGGGGCGTTCGATTACTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009986 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0010154 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0080167 GO:0090558 GO:0090567 GO:0090627 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000012
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

458

Amino Acids

50.67

Weight (kDa)

8.9

Isoelectric Point (pI)

56.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 78 - 236 1.5e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 78 - 236 1.1e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 304 - 410 2.5e-19 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 312 - 394 5.1e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012958)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34650
fragaria_vesca FvH4_3g09660
malus_domestica MD00G1109900.v1.1 MD05G1276300.v1.1
prunus_persica Prupe.4G088000_v2.0.a1 Prupe.4G088000_v2.0.a1
pyrus_communis pycom05g25730 pycom10g21130
rosa_chinensis RchiOBHm_Chr5g0015331
rosa_laevigata RLG00000032193
rosa_multiflora Rmu_co8298181.1_g000001
rosa_roxburghii Rroxscaffold_1G00061120
rosa_rugosa Rorug05G0026700
rosa_samantha Rh5AG120200 Rh5BG119100 Rh5CG129600 Rh5DG118000
rosa_wichuraiana Rw5G010390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1106, 1212
AccB1I GGYRCC 3 cut(s) 137, 266, 943
AccB7I CCANNNNNTGG 1 cut(s) 622
AccBSI CCGCTC 2 cut(s) 168, 1177
AccI GTMKAC 3 cut(s) 273, 342, 360
AccII CGCG 8 cut(s) 35, 37, 225, 980, 1121, 1136, 1138, 1197
AclWI GGATC 4 cut(s) 412, 663, 1010, 1244
AcoI YGGCCR 1 cut(s) 1265
AcuI CTGAAG 2 cut(s) 214, 665
AcyI GRCGYC 5 cut(s) 944, 1034, 1103, 1209, 1304
AfaI GTAC 5 cut(s) 25, 503, 611, 785, 938
AfiI CCNNNNNNNGG 4 cut(s) 622, 649, 886, 1138
AflIII ACRYGT 1 cut(s) 618
AgsI TTSAA 2 cut(s) 54, 1231
AjnI CCWGG 1 cut(s) 594
AluBI AGCT 2 cut(s) 10, 567
AluI AGCT 2 cut(s) 10, 567
Alw21I GWGCWC 2 cut(s) 663, 806
Alw26I GTCTC 2 cut(s) 633, 1052
AlwI GGATC 4 cut(s) 412, 663, 1010, 1244
Ama87I CYCGRG 3 cut(s) 799, 1184, 1279
AoxI GGCC 5 cut(s) 369, 375, 471, 1129, 1265
ApeKI GCWGC 5 cut(s) 282, 584, 1116, 1202, 1261
AspLEI GCGC 8 cut(s) 37, 414, 946, 1121, 1123, 1138, 1197, 1202
AspS9I GGNCC 9 cut(s) 14, 376, 592, 927, 966, 1129, 1141, 1168, 1276
AsuC2I CCSGG 5 cut(s) 907, 1153, 1172, 1280, 1281
AsuHPI GGTGA 1 cut(s) 732
AvaI CYCGRG 3 cut(s) 799, 1184, 1279
AvaII GGWCC 7 cut(s) 14, 592, 927, 966, 1141, 1168, 1276
BanI GGYRCC 3 cut(s) 137, 266, 943
BanII GRGCYC 1 cut(s) 396
BauI CACGAG 1 cut(s) 932
Bbv12I GWGCWC 2 cut(s) 663, 806
BbvCI CCTCAGC 2 cut(s) 563, 588
BbvI GCAGC 5 cut(s) 294, 571, 1128, 1189, 1248
BccI CCATC 5 cut(s) 400, 776, 787, 1057, 1267
BceAI ACGGC 4 cut(s) 716, 988, 1021, 1291
BciT130I CCWGG 1 cut(s) 596
BclI TGATCA 1 cut(s) 1330
BcnI CCSGG 5 cut(s) 907, 1153, 1172, 1280, 1281
BcoDI GTCTC 2 cut(s) 633, 1052
BfmI CTRYAG 4 cut(s) 70, 280, 634, 1114
BfoI RGCGCY 2 cut(s) 947, 1203
BglI GCCNNNNNGGC 1 cut(s) 249
BlpI GCTNAGC 1 cut(s) 891
BmcAI AGTACT 2 cut(s) 25, 503
Bme1390I CCNGG 6 cut(s) 596, 907, 1153, 1172, 1280, 1281
Bme18I GGWCC 7 cut(s) 14, 592, 927, 966, 1141, 1168, 1276
BmeT110I CYCGRG 3 cut(s) 799, 1184, 1279
BmgT120I GGNCC 9 cut(s) 14, 376, 592, 927, 966, 1129, 1141, 1168, 1276
BmrFI CCNGG 6 cut(s) 596, 907, 1153, 1172, 1280, 1281
BmsI GCATC 4 cut(s) 255, 498, 1083, 1228
BplI GAGNNNNNCTC 4 cut(s) 491, 523, 755, 787
Bpu10I CCTNAGC 2 cut(s) 563, 588
Bpu1102I GCTNAGC 1 cut(s) 891
BpuEI CTTGAG 3 cut(s) 140, 365, 1145
BpuMI CCSGG 5 cut(s) 907, 1153, 1172, 1280, 1281
BsaAI YACGTR 1 cut(s) 940
BsaHI GRCGYC 5 cut(s) 944, 1034, 1103, 1209, 1304
BsaI GGTCTC 1 cut(s) 633
BsaJI CCNNGG 3 cut(s) 372, 970, 1279
BsaWI WCCGGW 3 cut(s) 754, 843, 959
BsaXI ACNNNNNCTCC 6 cut(s) 155, 185, 509, 539, 796, 826
Bsc4I CCNNNNNNNGG 4 cut(s) 622, 649, 886, 1138
Bse118I RCCGGY 2 cut(s) 834, 895
Bse1I ACTGG 1 cut(s) 992
BseBI CCWGG 1 cut(s) 596
BseDI CCNNGG 3 cut(s) 372, 970, 1279
BseGI GGATG 4 cut(s) 317, 323, 1219, 1333
BseLI CCNNNNNNNGG 4 cut(s) 622, 649, 886, 1138
BseMII CTCAG 4 cut(s) 577, 579, 882, 1277
BseNI ACTGG 1 cut(s) 992
BsePI GCGCGC 1 cut(s) 1119
BseRI GAGGAG 2 cut(s) 160, 739
BseX3I CGGCCG 1 cut(s) 1265
BseXI GCAGC 5 cut(s) 294, 571, 1128, 1189, 1248
Bsh1236I CGCG 8 cut(s) 35, 37, 225, 980, 1121, 1136, 1138, 1197
Bsh1285I CGRYCG 4 cut(s) 848, 900, 1259, 1268
BshFI GGCC 5 cut(s) 371, 377, 473, 1131, 1267
BshNI GGYRCC 3 cut(s) 137, 266, 943
BsiEI CGRYCG 4 cut(s) 848, 900, 1259, 1268
BsiHKAI GWGCWC 2 cut(s) 663, 806
BsiHKCI CYCGRG 3 cut(s) 799, 1184, 1279
BsiWI CGTACG 1 cut(s) 783
BslFI GGGAC 6 cut(s) 279, 940, 952, 1071, 1154, 1262
BslI CCNNNNNNNGG 4 cut(s) 622, 649, 886, 1138
BsmAI GTCTC 2 cut(s) 633, 1052
BsmFI GGGAC 6 cut(s) 279, 940, 952, 1071, 1154, 1262
BsnI GGCC 5 cut(s) 371, 377, 473, 1131, 1267
Bso31I GGTCTC 1 cut(s) 633
BsoBI CYCGRG 3 cut(s) 799, 1184, 1279
Bsp1286I GDGCHC 3 cut(s) 396, 663, 806
Bsp143I GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
Bsp1720I GCTNAGC 1 cut(s) 891
BspANI GGCC 5 cut(s) 371, 377, 473, 1131, 1267
BspCNI CTCAG 4 cut(s) 576, 580, 883, 1278
BspFNI CGCG 8 cut(s) 35, 37, 225, 980, 1121, 1136, 1138, 1197
BspMAI CTGCAG 2 cut(s) 284, 1118
BspPI GGATC 4 cut(s) 412, 663, 1010, 1244
BspT107I GGYRCC 3 cut(s) 137, 266, 943
BspTNI GGTCTC 1 cut(s) 633
BsrBI CCGCTC 2 cut(s) 168, 1177
BsrFI RCCGGY 2 cut(s) 834, 895
BsrI ACTGG 1 cut(s) 992
BssAI RCCGGY 2 cut(s) 834, 895
BssECI CCNNGG 3 cut(s) 372, 970, 1279
BssHII GCGCGC 1 cut(s) 1119
BssMI GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
BssNI GRCGYC 5 cut(s) 944, 1034, 1103, 1209, 1304
BssSI CACGAG 1 cut(s) 932
BssT1I CCWWGG 1 cut(s) 372
Bst2BI CACGAG 1 cut(s) 932
Bst2UI CCWGG 1 cut(s) 596
Bst4CI ACNGT 5 cut(s) 50, 271, 677, 1257, 1353
Bst6I CTCTTC 1 cut(s) 887
BstACI GRCGYC 5 cut(s) 944, 1034, 1103, 1209, 1304
BstBAI YACGTR 1 cut(s) 940
BstC8I GCNNGC 2 cut(s) 790, 1121
BstDEI CTNAG 4 cut(s) 563, 588, 891, 1286
BstDSI CCRYGG 1 cut(s) 970
BstF5I GGATG 4 cut(s) 317, 323, 1219, 1333
BstFNI CGCG 8 cut(s) 35, 37, 225, 980, 1121, 1136, 1138, 1197
BstH2I RGCGCY 2 cut(s) 947, 1203
BstHHI GCGC 8 cut(s) 37, 414, 946, 1121, 1123, 1138, 1197, 1202
BstKTI GATC 6 cut(s) 420, 671, 1005, 1023, 1239, 1333
BstMAI GTCTC 2 cut(s) 633, 1052
BstMBI GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
BstMCI CGRYCG 4 cut(s) 848, 900, 1259, 1268
BstMWI GCNNNNNNNGC 9 cut(s) 81, 231, 240, 249, 264, 288, 513, 728, 1267
BstNI CCWGG 1 cut(s) 596
BstNSI RCATGY 1 cut(s) 622
BstSCI CCNGG 6 cut(s) 594, 905, 1151, 1170, 1278, 1279
BstSFI CTRYAG 4 cut(s) 70, 280, 634, 1114
BstUI CGCG 8 cut(s) 35, 37, 225, 980, 1121, 1136, 1138, 1197
BstV1I GCAGC 5 cut(s) 294, 571, 1128, 1189, 1248
BstX2I RGATCY 3 cut(s) 417, 668, 1002
BstYI RGATCY 3 cut(s) 417, 668, 1002
BstZI CGGCCG 1 cut(s) 1265
BsuRI GGCC 5 cut(s) 371, 377, 473, 1131, 1267
BtgI CCRYGG 1 cut(s) 970
BtsCI GGATG 4 cut(s) 317, 323, 1219, 1333
BtsI GCAGTG 1 cut(s) 1064
BtsIMutI CAGTG 1 cut(s) 1064
Cac8I GCNNGC 2 cut(s) 790, 1121
CciNI GCGGCCGC 1 cut(s) 1265
CfoI GCGC 8 cut(s) 37, 414, 946, 1121, 1123, 1138, 1197, 1202
Cfr10I RCCGGY 2 cut(s) 834, 895
Cfr13I GGNCC 9 cut(s) 14, 376, 592, 927, 966, 1129, 1141, 1168, 1276
Cfr9I CCCGGG 1 cut(s) 1279
CseI GACGC 5 cut(s) 107, 328, 728, 1042, 1312
Csp6I GTAC 5 cut(s) 24, 502, 610, 784, 937
CviAII CATG 6 cut(s) 336, 349, 496, 619, 685, 912
CviQI GTAC 5 cut(s) 24, 502, 610, 784, 937
DdeI CTNAG 4 cut(s) 563, 588, 891, 1286
DinI GGCGCC 1 cut(s) 945
DpnI GATC 6 cut(s) 419, 670, 1004, 1022, 1238, 1332
DpnII GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
EaeI YGGCCR 1 cut(s) 1265
EagI CGGCCG 1 cut(s) 1265
Eam1104I CTCTTC 1 cut(s) 887
EarI CTCTTC 1 cut(s) 887
EciI GGCGGA 3 cut(s) 199, 521, 1045
EclXI CGGCCG 1 cut(s) 1265
Eco130I CCWWGG 1 cut(s) 372
Eco147I AGGCCT 2 cut(s) 371, 473
Eco24I GRGCYC 1 cut(s) 396
Eco31I GGTCTC 1 cut(s) 633
Eco32I GATATC 1 cut(s) 1149
Eco47I GGWCC 7 cut(s) 14, 592, 927, 966, 1141, 1168, 1276
Eco52I CGGCCG 1 cut(s) 1265
Eco57I CTGAAG 2 cut(s) 214, 665
Eco88I CYCGRG 3 cut(s) 799, 1184, 1279
EcoO109I RGGNCCY 5 cut(s) 592, 927, 966, 1141, 1168
EcoRII CCWGG 1 cut(s) 594
EcoRV GATATC 1 cut(s) 1149
EcoT14I CCWWGG 1 cut(s) 372
EcoT38I GRGCYC 1 cut(s) 396
EgeI GGCGCC 1 cut(s) 945
EheI GGCGCC 1 cut(s) 945
ErhI CCWWGG 1 cut(s) 372
FaeI CATG 6 cut(s) 339, 352, 499, 622, 688, 915
FaiI YATR 7 cut(s) 337, 350, 497, 537, 620, 686, 913
FalI AAGNNNNNCTT 2 cut(s) 356, 388
FaqI GGGAC 6 cut(s) 279, 940, 952, 1071, 1154, 1262
FatI CATG 6 cut(s) 335, 348, 495, 618, 684, 911
FauI CCCGC 4 cut(s) 736, 797, 803, 1131
FbaI TGATCA 1 cut(s) 1330
FblI GTMKAC 3 cut(s) 273, 342, 360
FokI GGATG 4 cut(s) 304, 310, 1206, 1340
FriOI GRGCYC 1 cut(s) 396
GlaI GCGC 8 cut(s) 36, 413, 945, 1120, 1122, 1137, 1196, 1201
HaeII RGCGCY 2 cut(s) 947, 1203
HaeIII GGCC 5 cut(s) 371, 377, 473, 1131, 1267
HgaI GACGC 5 cut(s) 107, 328, 728, 1042, 1312
HhaI GCGC 8 cut(s) 37, 414, 946, 1121, 1123, 1138, 1197, 1202
Hin1I GRCGYC 5 cut(s) 944, 1034, 1103, 1209, 1304
Hin1II CATG 6 cut(s) 339, 352, 499, 622, 688, 915
Hin6I GCGC 8 cut(s) 35, 412, 944, 1119, 1121, 1136, 1195, 1200
HinP1I GCGC 8 cut(s) 35, 412, 944, 1119, 1121, 1136, 1195, 1200
HincII GTYRAC 2 cut(s) 361, 985
HindII GTYRAC 2 cut(s) 361, 985
HinfI GANTC 9 cut(s) 41, 145, 299, 305, 451, 627, 737, 746, 764
HphI GGTGA 1 cut(s) 732
Hpy166II GTNNAC 5 cut(s) 274, 343, 361, 985, 1107
Hpy188III TCNNGA 9 cut(s) 296, 382, 448, 761, 849, 925, 1078, 1099, 1213
Hpy8I GTNNAC 5 cut(s) 274, 343, 361, 985, 1107
Hpy99I CGWCG 7 cut(s) 101, 362, 677, 722, 926, 1105, 1306
HpyAV CCTTC 5 cut(s) 103, 382, 826, 1105, 1284
HpyCH4III ACNGT 5 cut(s) 50, 271, 677, 1257, 1353
HpyCH4IV ACGT 4 cut(s) 657, 939, 1103, 1209
HpyCH4V TGCA 4 cut(s) 282, 489, 523, 1116
HpyF10VI GCNNNNNNNGC 9 cut(s) 81, 231, 240, 249, 264, 288, 513, 728, 1267
HpyF3I CTNAG 4 cut(s) 563, 588, 891, 1286
HpySE526I ACGT 4 cut(s) 657, 939, 1103, 1209
Hsp92I GRCGYC 5 cut(s) 944, 1034, 1103, 1209, 1304
Hsp92II CATG 6 cut(s) 339, 352, 499, 622, 688, 915
HspAI GCGC 8 cut(s) 35, 412, 944, 1119, 1121, 1136, 1195, 1200
KasI GGCGCC 1 cut(s) 943
KflI GGGWCCC 1 cut(s) 927
Ksp22I TGATCA 1 cut(s) 1330
Kzo9I GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
Lsp1109I GCAGC 5 cut(s) 294, 571, 1128, 1189, 1248
LweI GCATC 4 cut(s) 255, 498, 1083, 1228
MaeII ACGT 4 cut(s) 657, 939, 1103, 1209
MaeIII GTNAC 3 cut(s) 62, 677, 738
MalI GATC 6 cut(s) 419, 670, 1004, 1022, 1238, 1332
MbiI CCGCTC 2 cut(s) 168, 1177
MboI GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
MboII GAAGA 5 cut(s) 124, 397, 874, 997, 1219
MflI RGATCY 3 cut(s) 417, 668, 1002
MhlI GDGCHC 3 cut(s) 396, 663, 806
Mly113I GGCGCC 1 cut(s) 944
MlyI GAGTC 6 cut(s) 293, 299, 445, 740, 746, 773
MmeI TCCRAC 6 cut(s) 198, 327, 696, 717, 741, 1305
MseI TTAA 2 cut(s) 113, 1091
MslI CAYNNNNRTG 1 cut(s) 494
MspR9I CCNGG 6 cut(s) 596, 907, 1153, 1172, 1280, 1281
MteI GCGCNGCGC 1 cut(s) 1198
MvaI CCWGG 1 cut(s) 596
MvnI CGCG 8 cut(s) 35, 37, 225, 980, 1121, 1136, 1138, 1197
MwoI GCNNNNNNNGC 9 cut(s) 81, 231, 240, 249, 264, 288, 513, 728, 1267
NarI GGCGCC 1 cut(s) 944
NciI CCSGG 5 cut(s) 907, 1153, 1172, 1280, 1281
NdeII GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
NlaIII CATG 6 cut(s) 339, 352, 499, 622, 688, 915
NmeAIII GCCGAG 2 cut(s) 427, 487
NmuCI GTSAC 3 cut(s) 62, 677, 738
NotI GCGGCCGC 1 cut(s) 1265
NspI RCATGY 1 cut(s) 622
PauI GCGCGC 1 cut(s) 1119
PceI AGGCCT 2 cut(s) 371, 473
PciI ACATGT 1 cut(s) 618
PcsI WCGNNNNNNNCGW 4 cut(s) 255, 465, 669, 930
PfeI GAWTC 3 cut(s) 41, 145, 627
Pfl23II CGTACG 1 cut(s) 783
PflFI GACNNNGTC 1 cut(s) 865
PflMI CCANNNNNTGG 1 cut(s) 622
PleI GAGTC 6 cut(s) 293, 299, 445, 740, 745, 772
PluTI GGCGCC 1 cut(s) 947
PpsI GAGTC 6 cut(s) 293, 299, 445, 740, 745, 772
Ppu21I YACGTR 1 cut(s) 940
PpuMI RGGWCCY 5 cut(s) 592, 927, 966, 1141, 1168
PscI ACATGT 1 cut(s) 618
Psp5II RGGWCCY 5 cut(s) 592, 927, 966, 1141, 1168
Psp6I CCWGG 1 cut(s) 594
PspGI CCWGG 1 cut(s) 594
PspLI CGTACG 1 cut(s) 783
PspPI GGNCC 9 cut(s) 14, 376, 592, 927, 966, 1129, 1141, 1168, 1276
PspPPI RGGWCCY 5 cut(s) 592, 927, 966, 1141, 1168
PstI CTGCAG 2 cut(s) 284, 1118
PsuI RGATCY 3 cut(s) 417, 668, 1002
PsyI GACNNNGTC 1 cut(s) 865
PteI GCGCGC 1 cut(s) 1119
RsaI GTAC 5 cut(s) 25, 503, 611, 785, 938
RsaNI GTAC 5 cut(s) 24, 502, 610, 784, 937
RseI CAYNNNNRTG 1 cut(s) 494
SalI GTCGAC 1 cut(s) 359
SaqAI TTAA 2 cut(s) 113, 1091
Sau3AI GATC 6 cut(s) 417, 668, 1002, 1020, 1236, 1330
Sau96I GGNCC 9 cut(s) 14, 376, 592, 927, 966, 1129, 1141, 1168, 1276
ScaI AGTACT 2 cut(s) 25, 503
SchI GAGTC 6 cut(s) 293, 299, 445, 740, 746, 773
ScrFI CCNGG 6 cut(s) 596, 907, 1153, 1172, 1280, 1281
SduI GDGCHC 3 cut(s) 396, 663, 806
SfaNI GCATC 4 cut(s) 255, 498, 1083, 1228
SfcI CTRYAG 4 cut(s) 70, 280, 634, 1114
SfoI GGCGCC 1 cut(s) 945
SinI GGWCC 7 cut(s) 14, 592, 927, 966, 1141, 1168, 1276
SmaI CCCGGG 1 cut(s) 1281
SmiMI CAYNNNNRTG 1 cut(s) 494
SmlI CTYRAG 3 cut(s) 155, 380, 1124
SmoI CTYRAG 3 cut(s) 155, 380, 1124
SseBI AGGCCT 2 cut(s) 371, 473
SspDI GGCGCC 1 cut(s) 943
StuI AGGCCT 2 cut(s) 371, 473
StyD4I CCNGG 6 cut(s) 594, 905, 1151, 1170, 1278, 1279
StyI CCWWGG 1 cut(s) 372
TaaI ACNGT 5 cut(s) 50, 271, 677, 1257, 1353
TaiI ACGT 4 cut(s) 660, 942, 1106, 1212
TaqI TCGA 7 cut(s) 96, 360, 468, 848, 1052, 1190, 1365
TaqII GACCGA 1 cut(s) 178
TatI WGTACW 2 cut(s) 23, 501
TfiI GAWTC 3 cut(s) 41, 145, 627
Tru1I TTAA 2 cut(s) 113, 1091
Tru9I TTAA 2 cut(s) 113, 1091
TscAI CASTG 1 cut(s) 1071
TseFI GTSAC 3 cut(s) 62, 677, 738
TseI GCWGC 5 cut(s) 282, 584, 1116, 1202, 1261
Tsp45I GTSAC 3 cut(s) 62, 677, 738
TspDTI ATGAA 1 cut(s) 365
TspGWI ACGGA 1 cut(s) 1362
TspMI CCCGGG 1 cut(s) 1279
TspRI CASTG 1 cut(s) 1071
Tth111I GACNNNGTC 1 cut(s) 865
Van91I CCANNNNNTGG 1 cut(s) 622
VpaK11BI GGWCC 7 cut(s) 14, 592, 927, 966, 1141, 1168, 1276
XceI RCATGY 1 cut(s) 622
XcmI CCANNNNNNNNNTGG 1 cut(s) 403
XmaI CCCGGG 1 cut(s) 1279
XmiI GTMKAC 3 cut(s) 273, 342, 360
ZraI GACGTC 2 cut(s) 1104, 1210
ZrmI AGTACT 2 cut(s) 25, 503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.