Rorug05G0026700

Protein kinase PINOID-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000331
Physical Location & Seq
Forward (+)
1723375 .. 1727023
3649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0026700.1

Sequence Viewer

Length: 1380 bp
ATGAAACAAAGGGTGTTTTTCAAGAACAAGAAGAAGCCAACCATGTCTTGTTTAAAATTCTCCATATTGGTCCTCTGTCTCCATGTATCTTGTTCCGGTGCCCTGGATTATCGTAAAGATCCTGTCTTGACAATTAGGCAAAAAGATAGCATGTTACCTATGATCTCCCCTACCGCGGCTCCTAAGCCGTTTCTTCCCCTTCTTGCTCCTTCACCATTGGCGCCATTCACAAACATTACTGTTCCAAAAATATCAGGACAATGTATGCTGAACTTCACTGCTTCTGAGAGTTTGATGAGTATGACCGCAATTGATTGTTGGTCTGTTTTTGCACCATTGCTGGCAAACGTTATTTGTTGCCCACAGTTGGAAGCTACTATCACAATCCTCATCGGTCAGTCCAGTAAATACACCAATGTGCTTGCTTTAAATGGGACGGCTGCAAAATATTGTCTATCCGATATTAAGCAGATTTTGGTTAGCCAGGGCGCAAATGACACCCTTGCGCAAATATGCTCAGTTCGTTCAACAGATCTCACTGATGCATCTTGCCCCATCATTGATGTTACTGAATTTGAGGAGACAGTGGATACTTCCAAGTTGGTGGCCGCTTGTGAGAAGATAGACCCTGTGAAAGAATGCTGCGCTCAAACATGTCAGAATGCCATATTAGAAGCTGCTACGAGAATTGCTTCAAAAACTTCTGATCTTTTGAGCACAGACGGTGGTCATGCTGTCTTACCTGATCACATAAGTAGAGTCAATGACTGCAAAAATATTGTCCTTCGCTGGCTGGCAAGTAAACTCAATCCTTCTCATGCCAAGGAAGTTCTAAGGGGACTCTCAAATTGCAAGATTAACAAGGTTTGCCCCCTGGTCTTCCCAAATATGAAACATGTTGCACTTGGCTGTGGGGATGAGATAAGCAACCAGACAGCTTGCTGTACGGCCATGGACAGCTATGTTTCCCACTTGCAAAAGCAGAGTTTCATAACCAACTTGCAAGCTTTGGATTGTGCTGCATCACTGGGAATGAAGTTAAGAAAAACAAATATTACCAAAGATGTGTACAGCCTGTGTCATATAAGCCTCAAGGATTTCTCCCTTCAAGTTGGAAGTCAAGCATCTGGATGTCTTTTGCCAAGCTTGCCTTCGGATGCAATATTTGAAAGTTCAGGGGTCAGCTTCCTTTGTGATCTGAATGATAACATTCCAGCTCCCTGGCCCACCTCTTCTCAAGGAGCAGCTTCAACATGCAGTAAAGGTGTCAAGATTCCTGCACTTCCTGCAGCAGCATCAGCAGAAAGGGGCAATTACAACGATGTTGTGATGCTTTCTCTGCTCGTTGGTTTCGCAATGGCCCTTTTGATGTTCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009986 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0010154 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048767 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0080167 GO:0090558 GO:0090567 GO:0090627 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000012
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

459

Amino Acids

49.28

Weight (kDa)

8.08

Isoelectric Point (pI)

50.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 85 - 233 5.8e-23 SPARK
At1g61900 PF26584 288 - 361 6.1e-37 At1g61900-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000331)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03625 AT4G03630 AT4G05460 AT4G05470 AT4G05475 AT4G05490 AT4G05497
fragaria_vesca FvH4_1g14800 FvH4_2g13770 FvH4_2g19530 FvH4_3g09530 FvH4_3g09530 FvH4_3g09552 FvH4_3g09562 FvH4_3g09640 FvH4_6g48070 FvH4_7g32622 FvH4_7g32650 FvH4_7g32650
malus_domestica MD01G1164600.v1.1 MD05G1060300.v1.1 MD05G1276900.v1.1 MD05G1277000.v1.1 MD13G1280000.v1.1
prunus_persica Prupe.4G087700_v2.0.a1 Prupe.4G087800_v2.0.a1 Prupe.4G087800_v2.0.a1 Prupe.4G087900_v2.0.a1
pyrus_communis pycom05g25780 pycom05g25800
rosa_chinensis RchiOBHm_Chr2g0103761 RchiOBHm_Chr2g0167391 RchiOBHm_Chr5g0015131 RchiOBHm_Chr5g0015151 RchiOBHm_Chr5g0015251 RchiOBHm_Chr5g0015321
rosa_laevigata RLG00000010446 RLG00000017256 RLG00000021713 RLG00000021727 RLG00000032174 RLG00000032175 RLG00000032181 RLG00000032186 RLG00000032190 RLG00000032192
rosa_multiflora Rmu_co8228227.1_g000001 Rmu_co8274851.1_g000001 Rmu_co8371751.1_g000001 Rmu_co8379153.1_g000001 Rmu_co8502117.1_g000002 Rmu_sc0000658.1_g000005 Rmu_sc0000658.1_g000012 Rmu_sc0001840.1_g000005 Rmu_sc0001845.1_g000001 Rmu_sc0002209.1_g000007 Rmu_sc0002209.1_g000013 Rmu_sc0002209.1_g000025 Rmu_sc0024563.1_g000001 Rmu_sc0039033.1_g000001
rosa_roxburghii Rroxscaffold_1G00061130 Rroxscaffold_1G00061210 Rroxscaffold_1G00061260 Rroxscaffold_1G00061390 Rroxscaffold_1G00061400 Rroxscaffold_2G00083550 Rroxscaffold_2G00139420
rosa_rugosa Rorug02G0117000 Rorug02G0530100 Rorug05G0024500 Rorug05G0024500 Rorug05G0025100 Rorug05G0025200 Rorug05G0026000 Rorug05G0026700 Rorug06G0384500
rosa_samantha Rh2AG165900 Rh2AG596900 Rh2AG597000 Rh2BG173200 Rh2BG608400 Rh2CG171900 Rh2CG579200 Rh2DG171400 Rh2DG306300 Rh5AG118900 Rh5AG119200 Rh5AG119300 Rh5AG119600 Rh5AG120000 Rh5AG120100 Rh5BG117000 Rh5BG117100 Rh5BG117200 Rh5BG117600 Rh5BG117700 Rh5BG118200 Rh5BG119000 Rh5CG127900 Rh5CG128000 Rh5CG128700 Rh5CG129500 Rh5DG115800 Rh5DG116000 Rh5DG117000 Rh5DG117400 Rh5DG117900 Rh6BG508700 Rh6BG508800
rosa_wichuraiana Rw2G013010 Rw5G010280 Rw5G010370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 507
AccB1I GGYRCC 2 cut(s) 98, 220
AccII CGCG 1 cut(s) 176
AciI CCGC 4 cut(s) 174, 176, 306, 609
AclI AACGTT 1 cut(s) 348
AclWI GGATC 1 cut(s) 113
AcoI YGGCCR 2 cut(s) 606, 948
AcsI RAATTY 2 cut(s) 56, 572
AcyI GRCGYC 1 cut(s) 221
AfaI GTAC 2 cut(s) 946, 1070
AfiI CCNNNNNNNGG 2 cut(s) 175, 367
AflIII ACRYGT 2 cut(s) 653, 895
AgsI TTSAA 6 cut(s) 22, 528, 696, 1109, 1169, 1251
AjnI CCWGG 4 cut(s) 102, 483, 873, 1220
AjuI GAANNNNNNNTTGG 2 cut(s) 1135, 1167
AleI CACNNNNGTG 1 cut(s) 416
AluBI AGCT 9 cut(s) 374, 677, 938, 960, 1007, 1146, 1185, 1217, 1247
AluI AGCT 9 cut(s) 374, 677, 938, 960, 1007, 1146, 1185, 1217, 1247
Alw21I GWGCWC 1 cut(s) 719
Alw26I GTCTC 2 cut(s) 83, 575
AlwI GGATC 1 cut(s) 113
AoxI GGCC 4 cut(s) 606, 948, 1223, 1359
ApeKI GCWGC 7 cut(s) 440, 642, 677, 1019, 1244, 1289, 1292
ApoI RAATTY 2 cut(s) 56, 572
ArsI GACNNNNNNTTYG 2 cut(s) 765, 797
Asp700I GAANNNNTTC 1 cut(s) 691
AspLEI GCGC 4 cut(s) 223, 491, 508, 647
AspS9I GGNCC 3 cut(s) 70, 1224, 1360
AsuHPI GGTGA 1 cut(s) 204
AvaII GGWCC 1 cut(s) 70
BaeGI GKGCMC 1 cut(s) 103
BanI GGYRCC 2 cut(s) 98, 220
BbsI GAAGAC 1 cut(s) 871
Bbv12I GWGCWC 1 cut(s) 719
BbvI GCAGC 7 cut(s) 427, 629, 664, 1006, 1256, 1301, 1304
BccI CCATC 1 cut(s) 563
BceAI ACGGC 3 cut(s) 172, 453, 963
BciT130I CCWGG 4 cut(s) 104, 485, 875, 1222
BciVI GTATCC 1 cut(s) 583
BclI TGATCA 1 cut(s) 745
BcoDI GTCTC 2 cut(s) 83, 575
BfmI CTRYAG 1 cut(s) 1287
BfoI RGCGCY 1 cut(s) 224
BfuI GTATCC 1 cut(s) 583
BglII AGATCT 1 cut(s) 532
BisI GCNGC 9 cut(s) 177, 441, 609, 643, 678, 1020, 1245, 1290, 1293
BlsI GCNGC 9 cut(s) 178, 442, 610, 644, 679, 1021, 1246, 1291, 1294
Bme1390I CCNGG 4 cut(s) 104, 485, 875, 1222
Bme18I GGWCC 1 cut(s) 70
BmgT120I GGNCC 3 cut(s) 70, 1224, 1360
BmiI GGNNCC 3 cut(s) 100, 180, 222
BmrFI CCNGG 4 cut(s) 104, 485, 875, 1222
BmrI ACTGGG 1 cut(s) 1037
BmsI GCATC 7 cut(s) 532, 554, 1031, 1133, 1147, 1304, 1320
BmuI ACTGGG 1 cut(s) 1037
BoxI GACNNNNGTC 1 cut(s) 726
BpiI GAAGAC 1 cut(s) 871
Bpu10I CCTNAGC 1 cut(s) 183
BpuEI CTTGAG 2 cut(s) 1076, 1221
BsaHI GRCGYC 1 cut(s) 221
BsaJI CCNNGG 7 cut(s) 102, 174, 484, 822, 873, 951, 1220
BsaWI WCCGGW 1 cut(s) 95
BsaXI ACNNNNNCTCC 2 cut(s) 163, 193
Bsc4I CCNNNNNNNGG 2 cut(s) 175, 367
Bse1I ACTGG 2 cut(s) 402, 1032
Bse3DI GCAATG 2 cut(s) 335, 1362
BseBI CCWGG 4 cut(s) 104, 485, 875, 1222
BseDI CCNNGG 7 cut(s) 102, 174, 484, 822, 873, 951, 1220
BseGI GGATG 3 cut(s) 922, 1136, 1162
BseLI CCNNNNNNNGG 2 cut(s) 175, 367
BseMI GCAATG 2 cut(s) 335, 1362
BseMII CTCAG 2 cut(s) 276, 531
BseNI ACTGG 2 cut(s) 402, 1032
BseRI GAGGAG 1 cut(s) 593
BseSI GKGCMC 1 cut(s) 103
BseXI GCAGC 7 cut(s) 427, 629, 664, 1006, 1256, 1301, 1304
BsgI GTGCAG 1 cut(s) 1263
Bsh1236I CGCG 1 cut(s) 176
BshFI GGCC 4 cut(s) 608, 950, 1225, 1361
BshNI GGYRCC 2 cut(s) 98, 220
BsiHKAI GWGCWC 1 cut(s) 719
BsiSI CCGG 1 cut(s) 96
BslFI GGGAC 2 cut(s) 448, 852
BslI CCNNNNNNNGG 2 cut(s) 175, 367
BsmAI GTCTC 2 cut(s) 83, 575
BsmFI GGGAC 2 cut(s) 448, 852
BsmI GAATGC 2 cut(s) 644, 667
BsnI GGCC 4 cut(s) 608, 950, 1225, 1361
Bsp1286I GDGCHC 2 cut(s) 103, 719
Bsp1407I TGTACA 1 cut(s) 1068
Bsp143I GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
Bsp19I CCATGG 1 cut(s) 951
BspACI CCGC 4 cut(s) 174, 176, 306, 609
BspANI GGCC 4 cut(s) 608, 950, 1225, 1361
BspCNI CTCAG 2 cut(s) 277, 530
BspFNI CGCG 1 cut(s) 176
BspLI GGNNCC 3 cut(s) 100, 180, 222
BspMAI CTGCAG 1 cut(s) 1291
BspPI GGATC 1 cut(s) 113
BspT107I GGYRCC 2 cut(s) 98, 220
BsrDI GCAATG 2 cut(s) 335, 1362
BsrGI TGTACA 1 cut(s) 1068
BsrI ACTGG 2 cut(s) 402, 1032
BssECI CCNNGG 7 cut(s) 102, 174, 484, 822, 873, 951, 1220
BssMI GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
BssNI GRCGYC 1 cut(s) 221
BssT1I CCWWGG 2 cut(s) 822, 951
Bst2UI CCWGG 4 cut(s) 104, 485, 875, 1222
Bst4CI ACNGT 4 cut(s) 241, 366, 586, 725
Bst6I CTCTTC 1 cut(s) 1237
BstACI GRCGYC 1 cut(s) 221
BstAPI GCANNNNNTGC 1 cut(s) 1286
BstAUI TGTACA 1 cut(s) 1068
BstC8I GCNNGC 7 cut(s) 342, 423, 791, 795, 940, 1005, 1148
BstDEI CTNAG 4 cut(s) 183, 285, 517, 833
BstDSI CCRYGG 2 cut(s) 174, 951
BstF5I GGATG 3 cut(s) 922, 1136, 1162
BstFNI CGCG 1 cut(s) 176
BstH2I RGCGCY 1 cut(s) 224
BstHHI GCGC 4 cut(s) 223, 491, 508, 647
BstKTI GATC 6 cut(s) 121, 165, 535, 709, 748, 1198
BstMAI GTCTC 2 cut(s) 83, 575
BstMBI GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
BstMWI GCNNNNNNNGC 4 cut(s) 1147, 1286, 1298, 1339
BstNI CCWGG 4 cut(s) 104, 485, 875, 1222
BstNSI RCATGY 4 cut(s) 154, 657, 899, 1257
BstPAI GACNNNNGTC 1 cut(s) 726
BstSCI CCNGG 4 cut(s) 102, 483, 873, 1220
BstSFI CTRYAG 1 cut(s) 1287
BstSLI GKGCMC 1 cut(s) 103
BstUI CGCG 1 cut(s) 176
BstV1I GCAGC 7 cut(s) 427, 629, 664, 1006, 1256, 1301, 1304
BstV2I GAAGAC 1 cut(s) 871
BstX2I RGATCY 2 cut(s) 118, 532
BstXI CCANNNNNNTGG 2 cut(s) 604, 1221
BstYI RGATCY 2 cut(s) 118, 532
BsuI GTATCC 1 cut(s) 583
BsuRI GGCC 4 cut(s) 608, 950, 1225, 1361
BtgI CCRYGG 2 cut(s) 174, 951
BtsCI GGATG 3 cut(s) 922, 1136, 1162
BtsI GCAGTG 1 cut(s) 276
BtsIMutI CAGTG 4 cut(s) 276, 537, 591, 1025
Cac8I GCNNGC 7 cut(s) 342, 423, 791, 795, 940, 1005, 1148
CfoI GCGC 4 cut(s) 223, 491, 508, 647
Cfr13I GGNCC 3 cut(s) 70, 1224, 1360
Cfr42I CCGCGG 1 cut(s) 177
Csp6I GTAC 2 cut(s) 945, 1069
CviQI GTAC 2 cut(s) 945, 1069
DdeI CTNAG 4 cut(s) 183, 285, 517, 833
DinI GGCGCC 1 cut(s) 222
DpnI GATC 6 cut(s) 120, 164, 534, 708, 747, 1197
DpnII GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
DraI TTTAAA 2 cut(s) 54, 429
EaeI YGGCCR 2 cut(s) 606, 948
Eam1104I CTCTTC 1 cut(s) 1237
EarI CTCTTC 1 cut(s) 1237
Eco130I CCWWGG 2 cut(s) 822, 951
Eco47I GGWCC 1 cut(s) 70
EcoRII CCWGG 4 cut(s) 102, 483, 873, 1220
EcoT14I CCWWGG 2 cut(s) 822, 951
EcoT22I ATGCAT 1 cut(s) 547
EgeI GGCGCC 1 cut(s) 222
EheI GGCGCC 1 cut(s) 222
ErhI CCWWGG 2 cut(s) 822, 951
FalI AAGNNNNNCTT 2 cut(s) 1135, 1167
FaqI GGGAC 2 cut(s) 448, 852
FbaI TGATCA 1 cut(s) 745
Fnu4HI GCNGC 9 cut(s) 177, 441, 609, 643, 678, 1020, 1245, 1290, 1293
FokI GGATG 3 cut(s) 929, 1143, 1169
Fsp4HI GCNGC 9 cut(s) 177, 441, 609, 643, 678, 1020, 1245, 1290, 1293
FspI TGCGCA 1 cut(s) 507
GlaI GCGC 4 cut(s) 222, 490, 507, 646
GluI GCNGC 9 cut(s) 177, 441, 609, 643, 678, 1020, 1245, 1290, 1293
HaeII RGCGCY 1 cut(s) 224
HaeIII GGCC 4 cut(s) 608, 950, 1225, 1361
HapII CCGG 1 cut(s) 96
HhaI GCGC 4 cut(s) 223, 491, 508, 647
Hin1I GRCGYC 1 cut(s) 221
Hin6I GCGC 4 cut(s) 221, 489, 506, 645
HinP1I GCGC 4 cut(s) 221, 489, 506, 645
HindIII AAGCTT 2 cut(s) 1005, 1144
HinfI GANTC 3 cut(s) 759, 840, 1273
HpaII CCGG 1 cut(s) 96
HphI GGTGA 1 cut(s) 204
Hpy166II GTNNAC 2 cut(s) 803, 1069
Hpy188I TCNGA 6 cut(s) 286, 460, 660, 706, 1156, 1200
Hpy188III TCNNGA 5 cut(s) 22, 127, 255, 1128, 1270
Hpy8I GTNNAC 2 cut(s) 803, 1069
HpyAV CCTTC 6 cut(s) 209, 219, 794, 822, 1115, 1161
HpyCH4III ACNGT 4 cut(s) 241, 366, 586, 725
HpyCH4IV ACGT 1 cut(s) 348
HpyF10VI GCNNNNNNNGC 4 cut(s) 1147, 1286, 1298, 1339
HpyF3I CTNAG 4 cut(s) 183, 285, 517, 833
HpySE526I ACGT 1 cut(s) 348
Hsp92I GRCGYC 1 cut(s) 221
HspAI GCGC 4 cut(s) 221, 489, 506, 645
KasI GGCGCC 1 cut(s) 220
Ksp22I TGATCA 1 cut(s) 745
KspI CCGCGG 1 cut(s) 177
Kzo9I GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
LmnI GCTCC 4 cut(s) 184, 211, 1222, 1241
Lsp1109I GCAGC 7 cut(s) 427, 629, 664, 1006, 1256, 1301, 1304
LweI GCATC 7 cut(s) 532, 554, 1031, 1133, 1147, 1304, 1320
MaeII ACGT 1 cut(s) 348
MaeIII GTNAC 2 cut(s) 153, 565
MalI GATC 6 cut(s) 120, 164, 534, 708, 747, 1197
MboI GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
MboII GAAGA 5 cut(s) 43, 185, 631, 871, 1224
MfeI CAATTG 1 cut(s) 309
MflI RGATCY 2 cut(s) 118, 532
MhlI GDGCHC 2 cut(s) 103, 719
MluCI AATT 7 cut(s) 56, 132, 309, 572, 687, 847, 1312
Mly113I GGCGCC 1 cut(s) 221
MlyI GAGTC 2 cut(s) 768, 834
MmeI TCCRAC 2 cut(s) 348, 1093
MnlI CCTC 5 cut(s) 83, 398, 571, 1100, 1240
Mph1103I ATGCAT 1 cut(s) 547
MroXI GAANNNNTTC 1 cut(s) 691
MseI TTAA 5 cut(s) 53, 428, 465, 858, 1040
MslI CAYNNNNRTG 2 cut(s) 416, 1129
MspA1I CMGCKG 1 cut(s) 176
MspI CCGG 1 cut(s) 96
MspR9I CCNGG 4 cut(s) 104, 485, 875, 1222
MunI CAATTG 1 cut(s) 309
Mva1269I GAATGC 2 cut(s) 644, 667
MvaI CCWGG 4 cut(s) 104, 485, 875, 1222
MvnI CGCG 1 cut(s) 176
MwoI GCNNNNNNNGC 4 cut(s) 1147, 1286, 1298, 1339
NarI GGCGCC 1 cut(s) 221
NcoI CCATGG 1 cut(s) 951
NdeII GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
NlaIV GGNNCC 3 cut(s) 100, 180, 222
NsbI TGCGCA 1 cut(s) 507
NsiI ATGCAT 1 cut(s) 547
NspI RCATGY 4 cut(s) 154, 657, 899, 1257
OliI CACNNNNGTG 1 cut(s) 416
PciI ACATGT 2 cut(s) 653, 895
PctI GAATGC 2 cut(s) 644, 667
PdmI GAANNNNTTC 1 cut(s) 691
PfeI GAWTC 1 cut(s) 1273
PkrI GCNGC 9 cut(s) 178, 442, 610, 644, 679, 1021, 1246, 1291, 1294
PleI GAGTC 2 cut(s) 767, 834
PluTI GGCGCC 1 cut(s) 224
PpsI GAGTC 2 cut(s) 767, 834
PscI ACATGT 2 cut(s) 653, 895
PshAI GACNNNNGTC 1 cut(s) 726
Psp1406I AACGTT 1 cut(s) 348
Psp6I CCWGG 4 cut(s) 102, 483, 873, 1220
PspGI CCWGG 4 cut(s) 102, 483, 873, 1220
PspN4I GGNNCC 3 cut(s) 100, 180, 222
PspPI GGNCC 3 cut(s) 70, 1224, 1360
PstI CTGCAG 1 cut(s) 1291
PsuI RGATCY 2 cut(s) 118, 532
RsaI GTAC 2 cut(s) 946, 1070
RsaNI GTAC 2 cut(s) 945, 1069
RseI CAYNNNNRTG 2 cut(s) 416, 1129
SacII CCGCGG 1 cut(s) 177
SaqAI TTAA 5 cut(s) 53, 428, 465, 858, 1040
SatI GCNGC 9 cut(s) 177, 441, 609, 643, 678, 1020, 1245, 1290, 1293
Sau3AI GATC 6 cut(s) 118, 162, 532, 706, 745, 1195
Sau96I GGNCC 3 cut(s) 70, 1224, 1360
SchI GAGTC 2 cut(s) 768, 834
ScrFI CCNGG 4 cut(s) 104, 485, 875, 1222
SduI GDGCHC 2 cut(s) 103, 719
SfaNI GCATC 7 cut(s) 532, 554, 1031, 1133, 1147, 1304, 1320
SfcI CTRYAG 1 cut(s) 1287
SfoI GGCGCC 1 cut(s) 222
Sfr303I CCGCGG 1 cut(s) 177
SgrBI CCGCGG 1 cut(s) 177
SinI GGWCC 1 cut(s) 70
SmiMI CAYNNNNRTG 2 cut(s) 416, 1129
SmlI CTYRAG 2 cut(s) 1091, 1236
SmoI CTYRAG 2 cut(s) 1091, 1236
Sse9I AATT 7 cut(s) 56, 132, 309, 572, 687, 847, 1312
SsiI CCGC 4 cut(s) 174, 176, 306, 609
SspDI GGCGCC 1 cut(s) 220
SspI AATATT 4 cut(s) 449, 778, 1054, 1164
StyD4I CCNGG 4 cut(s) 102, 483, 873, 1220
StyI CCWWGG 2 cut(s) 822, 951
TaaI ACNGT 4 cut(s) 241, 366, 586, 725
TaiI ACGT 1 cut(s) 351
TaqII GACCGA 1 cut(s) 383
TasI AATT 7 cut(s) 56, 132, 309, 572, 687, 847, 1312
TatI WGTACW 1 cut(s) 1068
TauI GCSGC 2 cut(s) 179, 611
TfiI GAWTC 1 cut(s) 1273
Tru1I TTAA 5 cut(s) 53, 428, 465, 858, 1040
Tru9I TTAA 5 cut(s) 53, 428, 465, 858, 1040
TscAI CASTG 4 cut(s) 283, 544, 591, 1032
TseI GCWGC 7 cut(s) 440, 642, 677, 1019, 1244, 1289, 1292
TspDTI ATGAA 5 cut(s) 17, 905, 979, 1049, 1363
TspRI CASTG 4 cut(s) 283, 544, 591, 1032
VpaK11BI GGWCC 1 cut(s) 70
XapI RAATTY 2 cut(s) 56, 572
XceI RCATGY 4 cut(s) 154, 657, 899, 1257
XmnI GAANNNNTTC 1 cut(s) 691
Zsp2I ATGCAT 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.