Rorug05G0024500

Heterogeneous nuclear ribonucleoprotein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000331
Physical Location & Seq
Reverse (-)
1554511 .. 1559173
4663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0024500.1

Sequence Viewer

Length: 1854 bp
ATGAACCTCCTCGAACAAATAGACAGTTGCTCAAATTCAATGGAAAGAAACTTGAAGAAGTTCAAGAGACAGAAGATTGAACTCACTAGAAACACAACTGAGGATGGTAGTATAACTGTTGTCCAAGCTGAAATTGCTGCACAGAAGAAGCATCATATTGAATCCTATGCCCTTGAAGATCCAATTGTAGATGACCGTCTAGTCAACTGGATGAGCATGGAGGAAACACAGGTTTTGCTTTCTGAAAAAGCTACGGATGGTGATTCAACTGCAGATTGTGATGAAACTGATGACAGTGATGATGAAGATGAAGATTATCGTGAAGAAGATGGTATTAACAATGACCATAAAGAAGCTGATGGAACTTCAAGACTTGTTGATGAACTGATTTATGAAGTTGCTGATAAGGGTTCAGATGCAGGGTGTGCAGAAATTTTCTCAGGTGCAGGTCAGCCACTATTTCAAAATGTGAACCGAGAAACCAATGAAGAACTACCAATAGGGCCAATTTGTAATGAGATGGAAATTAGAAACCAAAACAAGACAGAACCTAAGGATTTTGGAAGTTTCAAGGTACCAACTAGTATCCCAACTTCAAAGAAGGAGTTTATTCATACAGGATCTGGGAGCCTATCACAACATAAAAAGCCTCCAAAGTTGGCATTTTGCCCAAAAGAAGTGAAGAGAATAATTGATTCAGAATCCCTTCTACAGAAAAATGCTCATTCACACACAATAAGGAAGATCATAGTTTTTGCATCTCTTGGTATAAGGCATGGTTGTGAAGATATATATGAATTAGACTTCAACCATTTTAGCATTTTAAGGAAGGGCGAGCAATACATATCTCCAACAGATCCTGGGGAGCATGTTCTGTATGAAAATCCTGGTGTTCGGAGGAAGGTATTCTATCCAAACCGAAAGAACCCTACACTATGTCCAGTTCAAATACTTGAGGAAGAGAAGGCTATGCGTCCATCAGATCCTAGCTGCCCATCATGCTTATTTCTATGCATCAAGTATGGTGGAAGGACAAGAAACCTTCCCCAAAATGAATATGTCAGACAGCGCATGGGAAGAAACAAGCTAAAGTCTTTTGGGCCATTGATGTGTCGAATGGCAATGCTAGCTCATGTTCGCAGTGGGAGCTTCTTTTTCAAAGCCTTGGGAATCACACTTCTTTTCATGGCTGGTTTTCCTGATGACCTGGTTCAAAGGGAAACCAAATATCGGAACTTAGACTTGCTCCAGAAATATTACAGGACAGATGAGGATGCTGAAGGAGAGGAATTATTTCTTGCATATCCTATGATAGATGATGATACTCAGGCTAGTCCAGGTTCTCAGCAGTTTTGTGGCAAGACTTCTTCAACAAAAACAAAGGGAAAGAAACAGGCTCACTCTAAGCAGAAGACTTCATTCCCAAATAGTACATTTTCAAGCTCTGCACCTCAATTTGGACTAATGAATCAAGCCTCTATTCCCCCATTAGCTGCTCCACCAATCTCAAACACTGTGATCACCAATGCTGGTACTAATATCCCCTATCATAATCCAAACCCGTATCACCTTTTTCCTCCACAACCATCAAACACTTTCACGCCTATGGTATATTGGCCTCCCCCAAACACATTTTCTCCTGGACTACCTTATCAATCTACATATGGTTACCGGTCTTACCCTTCTGCCGGAAATTACTTCATCCATCCGCAGCCTTATTACAGCCATCCATCCTGCGGTCCATTGATCCCCAAAACGATAGAAGTAGCAAAGAAAAATGGCATGGCCTCGGAGGAAGCTGCTGATAGTGATTATGATTGTAGTTCAAGCAGTATAGAGCCAAAGAAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

617

Amino Acids

69.36

Weight (kDa)

5.68

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000331)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03625 AT4G03630 AT4G05460 AT4G05470 AT4G05475 AT4G05490 AT4G05497
fragaria_vesca FvH4_1g14800 FvH4_2g13770 FvH4_2g19530 FvH4_3g09530 FvH4_3g09530 FvH4_3g09552 FvH4_3g09562 FvH4_3g09640 FvH4_6g48070 FvH4_7g32622 FvH4_7g32650 FvH4_7g32650
malus_domestica MD01G1164600.v1.1 MD05G1060300.v1.1 MD05G1276900.v1.1 MD05G1277000.v1.1 MD13G1280000.v1.1
prunus_persica Prupe.4G087700_v2.0.a1 Prupe.4G087800_v2.0.a1 Prupe.4G087800_v2.0.a1 Prupe.4G087900_v2.0.a1
pyrus_communis pycom05g25780 pycom05g25800
rosa_chinensis RchiOBHm_Chr2g0103761 RchiOBHm_Chr2g0167391 RchiOBHm_Chr5g0015131 RchiOBHm_Chr5g0015151 RchiOBHm_Chr5g0015251 RchiOBHm_Chr5g0015321
rosa_laevigata RLG00000010446 RLG00000017256 RLG00000021713 RLG00000021727 RLG00000032174 RLG00000032175 RLG00000032181 RLG00000032186 RLG00000032190 RLG00000032192
rosa_multiflora Rmu_co8228227.1_g000001 Rmu_co8274851.1_g000001 Rmu_co8371751.1_g000001 Rmu_co8379153.1_g000001 Rmu_co8502117.1_g000002 Rmu_sc0000658.1_g000005 Rmu_sc0000658.1_g000012 Rmu_sc0001840.1_g000005 Rmu_sc0001845.1_g000001 Rmu_sc0002209.1_g000007 Rmu_sc0002209.1_g000013 Rmu_sc0002209.1_g000025 Rmu_sc0024563.1_g000001 Rmu_sc0039033.1_g000001
rosa_roxburghii Rroxscaffold_1G00061130 Rroxscaffold_1G00061210 Rroxscaffold_1G00061260 Rroxscaffold_1G00061390 Rroxscaffold_1G00061400 Rroxscaffold_2G00083550 Rroxscaffold_2G00139420
rosa_rugosa Rorug02G0117000 Rorug02G0530100 Rorug05G0024500 Rorug05G0024500 Rorug05G0025100 Rorug05G0025200 Rorug05G0026000 Rorug05G0026700 Rorug06G0384500
rosa_samantha Rh2AG165900 Rh2AG596900 Rh2AG597000 Rh2BG173200 Rh2BG608400 Rh2CG171900 Rh2CG579200 Rh2DG171400 Rh2DG306300 Rh5AG118900 Rh5AG119200 Rh5AG119300 Rh5AG119600 Rh5AG120000 Rh5AG120100 Rh5BG117000 Rh5BG117100 Rh5BG117200 Rh5BG117600 Rh5BG117700 Rh5BG118200 Rh5BG119000 Rh5CG127900 Rh5CG128000 Rh5CG128700 Rh5CG129500 Rh5DG115800 Rh5DG116000 Rh5DG117000 Rh5DG117400 Rh5DG117900 Rh6BG508700 Rh6BG508800
rosa_wichuraiana Rw2G013010 Rw5G010280 Rw5G010370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 200
Acc36I ACCTGC 1 cut(s) 437
Acc65I GGTACC 1 cut(s) 574
AccB1I GGYRCC 1 cut(s) 574
AciI CCGC 2 cut(s) 1709, 1737
AclWI GGATC 5 cut(s) 173, 628, 851, 977, 1741
AcsI RAATTY 2 cut(s) 34, 432
AcuI CTGAAG 1 cut(s) 1299
AfaI GTAC 3 cut(s) 576, 1432, 1534
AfiI CCNNNNNNNGG 4 cut(s) 1230, 1457, 1688, 1736
AgeI ACCGGT 1 cut(s) 1671
AhlI ACTAGT 1 cut(s) 581
AjnI CCWGG 5 cut(s) 859, 886, 1206, 1336, 1639
AjuI GAANNNNNNNTTGG 2 cut(s) 1618, 1650
Alw26I GTCTC 1 cut(s) 61
AlwI GGATC 5 cut(s) 173, 628, 851, 977, 1741
AlwNI CAGNNNCTG 2 cut(s) 623, 860
AoxI GGCC 4 cut(s) 503, 1100, 1616, 1785
ApeKI GCWGC 5 cut(s) 137, 990, 1493, 1711, 1799
ApoI RAATTY 2 cut(s) 34, 432
AsiGI ACCGGT 1 cut(s) 1671
Asp700I GAANNNNTTC 4 cut(s) 59, 705, 905, 1293
Asp718I GGTACC 1 cut(s) 574
AspLEI GCGC 1 cut(s) 1071
AspS9I GGNCC 3 cut(s) 503, 1100, 1739
AsuHPI GGTGA 3 cut(s) 272, 1513, 1559
AsuNHI GCTAGC 1 cut(s) 1126
AvaII GGWCC 1 cut(s) 1739
AxyI CCTNAGG 1 cut(s) 552
BanI GGYRCC 1 cut(s) 574
BarI GAAGNNNNNNTAC 2 cut(s) 577, 609
BbsI GAAGAC 1 cut(s) 1418
BbvI GCAGC 5 cut(s) 124, 977, 1480, 1723, 1786
BciT130I CCWGG 5 cut(s) 861, 888, 1208, 1338, 1641
BciVI GTATCC 1 cut(s) 596
BclI TGATCA 1 cut(s) 1518
BcoDI GTCTC 1 cut(s) 61
BcuI ACTAGT 1 cut(s) 581
BfaI CTAG 7 cut(s) 87, 200, 582, 987, 1127, 1332, 1852
BfmI CTRYAG 2 cut(s) 270, 710
BfuAI ACCTGC 1 cut(s) 437
BfuI GTATCC 1 cut(s) 596
BisI GCNGC 5 cut(s) 138, 991, 1494, 1712, 1800
BlsI GCNGC 5 cut(s) 139, 992, 1495, 1713, 1801
Bme1390I CCNGG 5 cut(s) 861, 888, 1208, 1338, 1641
Bme18I GGWCC 1 cut(s) 1739
BmgT120I GGNCC 3 cut(s) 503, 1100, 1739
BmiI GGNNCC 2 cut(s) 576, 629
BmrFI CCNGG 5 cut(s) 861, 888, 1208, 1338, 1641
BmsI GCATC 5 cut(s) 160, 406, 767, 1023, 1264
BmtI GCTAGC 1 cut(s) 1130
BpiI GAAGAC 1 cut(s) 1418
BpmI CTGGAG 1 cut(s) 1232
BpuEI CTTGAG 1 cut(s) 974
BsaJI CCNNGG 3 cut(s) 860, 1164, 1788
BsaWI WCCGGW 1 cut(s) 1671
BsaXI ACNNNNNCTCC 2 cut(s) 1621, 1651
Bsc4I CCNNNNNNNGG 4 cut(s) 1230, 1457, 1688, 1736
Bse118I RCCGGY 1 cut(s) 1671
Bse1I ACTGG 2 cut(s) 212, 941
Bse21I CCTNAGG 1 cut(s) 552
Bse3DI GCAATG 1 cut(s) 1128
BseBI CCWGG 5 cut(s) 861, 888, 1208, 1338, 1641
BseDI CCNNGG 3 cut(s) 860, 1164, 1788
BseGI GGATG 8 cut(s) 109, 216, 262, 1279, 1701, 1705, 1726, 1730
BseLI CCNNNNNNNGG 4 cut(s) 1230, 1457, 1688, 1736
BseMI GCAATG 1 cut(s) 1128
BseMII CTCAG 4 cut(s) 90, 453, 1340, 1358
BseNI ACTGG 2 cut(s) 212, 941
BseXI GCAGC 5 cut(s) 124, 977, 1480, 1723, 1786
BsgI GTGCAG 4 cut(s) 123, 447, 465, 1431
BshFI GGCC 4 cut(s) 505, 1102, 1618, 1787
BshNI GGYRCC 1 cut(s) 574
BshTI ACCGGT 1 cut(s) 1671
BsiSI CCGG 2 cut(s) 1672, 1689
BslI CCNNNNNNNGG 4 cut(s) 1230, 1457, 1688, 1736
BsmAI GTCTC 1 cut(s) 61
BsnI GGCC 4 cut(s) 505, 1102, 1618, 1787
Bsp143I GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
BspACI CCGC 2 cut(s) 1709, 1737
BspANI GGCC 4 cut(s) 505, 1102, 1618, 1787
BspCNI CTCAG 4 cut(s) 91, 452, 1339, 1357
BspLI GGNNCC 2 cut(s) 576, 629
BspMAI CTGCAG 1 cut(s) 274
BspMI ACCTGC 1 cut(s) 437
BspOI GCTAGC 1 cut(s) 1130
BspPI GGATC 5 cut(s) 173, 628, 851, 977, 1741
BspT107I GGYRCC 1 cut(s) 574
BsrDI GCAATG 1 cut(s) 1128
BsrFI RCCGGY 1 cut(s) 1671
BsrI ACTGG 2 cut(s) 212, 941
BssAI RCCGGY 1 cut(s) 1671
BssECI CCNNGG 3 cut(s) 860, 1164, 1788
BssMI GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
BssT1I CCWWGG 1 cut(s) 1164
Bst2UI CCWGG 5 cut(s) 861, 888, 1208, 1338, 1641
Bst4CI ACNGT 5 cut(s) 26, 118, 197, 296, 1516
Bst6I CTCTTC 2 cut(s) 677, 954
BstAPI GCANNNNNTGC 1 cut(s) 425
BstC8I GCNNGC 2 cut(s) 836, 1128
BstDEI CTNAG 7 cut(s) 99, 439, 552, 1237, 1326, 1344, 1404
BstEII GGTNACC 1 cut(s) 1667
BstF5I GGATG 8 cut(s) 109, 216, 262, 1279, 1701, 1705, 1726, 1730
BstHHI GCGC 1 cut(s) 1071
BstKTI GATC 7 cut(s) 181, 623, 747, 859, 985, 1521, 1749
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
BstMWI GCNNNNNNNGC 5 cut(s) 134, 425, 999, 1127, 1146
BstNI CCWGG 5 cut(s) 861, 888, 1208, 1338, 1641
BstNSI RCATGY 1 cut(s) 872
BstPI GGTNACC 1 cut(s) 1667
BstSCI CCNGG 5 cut(s) 859, 886, 1206, 1336, 1639
BstSFI CTRYAG 2 cut(s) 270, 710
BstV1I GCAGC 5 cut(s) 124, 977, 1480, 1723, 1786
BstV2I GAAGAC 1 cut(s) 1418
BstX2I RGATCY 4 cut(s) 178, 620, 856, 982
BstYI RGATCY 4 cut(s) 178, 620, 856, 982
Bsu36I CCTNAGG 1 cut(s) 552
BsuI GTATCC 1 cut(s) 596
BsuRI GGCC 4 cut(s) 505, 1102, 1618, 1787
BtsCI GGATG 8 cut(s) 109, 216, 262, 1279, 1701, 1705, 1726, 1730
BtsI GCAGTG 1 cut(s) 1147
BtsIMutI CAGTG 3 cut(s) 301, 1147, 1512
BveI ACCTGC 1 cut(s) 437
Cac8I GCNNGC 2 cut(s) 836, 1128
CaiI CAGNNNCTG 2 cut(s) 623, 860
CfoI GCGC 1 cut(s) 1071
Cfr10I RCCGGY 1 cut(s) 1671
Cfr13I GGNCC 3 cut(s) 503, 1100, 1739
CseI GACGC 1 cut(s) 962
CsiI ACCWGGT 1 cut(s) 1206
Csp6I GTAC 3 cut(s) 575, 1431, 1533
CspAI ACCGGT 1 cut(s) 1671
CspCI CAANNNNNGTGG 2 cut(s) 1006, 1041
CviAII CATG 8 cut(s) 217, 776, 869, 999, 1072, 1133, 1186, 1783
CviQI GTAC 3 cut(s) 575, 1431, 1533
DdeI CTNAG 7 cut(s) 99, 439, 552, 1237, 1326, 1344, 1404
DpnI GATC 7 cut(s) 180, 622, 746, 858, 984, 1520, 1748
DpnII GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
DrdI GACNNNNNNGTC 1 cut(s) 200
DseDI GACNNNNNNGTC 1 cut(s) 200
Eam1104I CTCTTC 2 cut(s) 677, 954
EarI CTCTTC 2 cut(s) 677, 954
Eco130I CCWWGG 1 cut(s) 1164
Eco47I GGWCC 1 cut(s) 1739
Eco57I CTGAAG 1 cut(s) 1299
Eco81I CCTNAGG 1 cut(s) 552
Eco91I GGTNACC 1 cut(s) 1667
EcoO65I GGTNACC 1 cut(s) 1667
EcoRII CCWGG 5 cut(s) 859, 886, 1206, 1336, 1639
EcoT14I CCWWGG 1 cut(s) 1164
EcoT22I ATGCAT 1 cut(s) 1016
ErhI CCWWGG 1 cut(s) 1164
FaeI CATG 8 cut(s) 220, 779, 872, 1002, 1075, 1136, 1189, 1786
FatI CATG 8 cut(s) 216, 775, 868, 998, 1071, 1132, 1185, 1782
FauNDI CATATG 1 cut(s) 1663
FbaI TGATCA 1 cut(s) 1518
Fnu4HI GCNGC 5 cut(s) 138, 991, 1494, 1712, 1800
FokI GGATG 8 cut(s) 116, 223, 269, 1286, 1688, 1692, 1713, 1717
Fsp4HI GCNGC 5 cut(s) 138, 991, 1494, 1712, 1800
FspBI CTAG 7 cut(s) 87, 200, 582, 987, 1127, 1332, 1852
GlaI GCGC 1 cut(s) 1070
GluI GCNGC 5 cut(s) 138, 991, 1494, 1712, 1800
GsuI CTGGAG 1 cut(s) 1232
HaeIII GGCC 4 cut(s) 505, 1102, 1618, 1787
HapII CCGG 2 cut(s) 1672, 1689
HgaI GACGC 1 cut(s) 962
HhaI GCGC 1 cut(s) 1071
Hin1II CATG 8 cut(s) 220, 779, 872, 1002, 1075, 1136, 1189, 1786
Hin6I GCGC 1 cut(s) 1069
HinP1I GCGC 1 cut(s) 1069
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HinfI GANTC 6 cut(s) 161, 263, 695, 701, 1170, 1468
HpaII CCGG 2 cut(s) 1672, 1689
HphI GGTGA 3 cut(s) 272, 1513, 1559
Hpy166II GTNNAC 2 cut(s) 205, 472
Hpy188I TCNGA 8 cut(s) 244, 415, 700, 897, 982, 1064, 1233, 1792
Hpy188III TCNNGA 5 cut(s) 64, 320, 369, 1199, 1249
Hpy8I GTNNAC 2 cut(s) 205, 472
HpyAV CCTTC 9 cut(s) 595, 716, 823, 895, 958, 1023, 1052, 1274, 1692
HpyCH4III ACNGT 5 cut(s) 26, 118, 197, 296, 1516
HpyCH4V TGCA 9 cut(s) 140, 272, 419, 428, 446, 758, 1014, 1301, 1448
HpyF10VI GCNNNNNNNGC 5 cut(s) 134, 425, 999, 1127, 1146
HpyF3I CTNAG 7 cut(s) 99, 439, 552, 1237, 1326, 1344, 1404
Hsp92II CATG 8 cut(s) 220, 779, 872, 1002, 1075, 1136, 1189, 1786
HspAI GCGC 1 cut(s) 1069
KpnI GGTACC 1 cut(s) 578
Ksp22I TGATCA 1 cut(s) 1518
Kzo9I GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
LmnI GCTCC 5 cut(s) 627, 865, 1146, 1251, 1501
Lsp1109I GCAGC 5 cut(s) 124, 977, 1480, 1723, 1786
LweI GCATC 5 cut(s) 160, 406, 767, 1023, 1264
MabI ACCWGGT 1 cut(s) 1206
MaeI CTAG 7 cut(s) 87, 200, 582, 987, 1127, 1332, 1852
MaeIII GTNAC 1 cut(s) 1667
MalI GATC 7 cut(s) 180, 622, 746, 858, 984, 1520, 1748
MboI GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
MfeI CAATTG 1 cut(s) 183
MflI RGATCY 4 cut(s) 178, 620, 856, 982
MmeI TCCRAC 1 cut(s) 875
Mph1103I ATGCAT 1 cut(s) 1016
MroXI GAANNNNTTC 4 cut(s) 59, 705, 905, 1293
MseI TTAA 2 cut(s) 336, 824
MslI CAYNNNNRTG 3 cut(s) 780, 1108, 1604
MspI CCGG 2 cut(s) 1672, 1689
MspR9I CCNGG 5 cut(s) 861, 888, 1208, 1338, 1641
MunI CAATTG 1 cut(s) 183
MvaI CCWGG 5 cut(s) 861, 888, 1208, 1338, 1641
MwoI GCNNNNNNNGC 5 cut(s) 134, 425, 999, 1127, 1146
NdeI CATATG 1 cut(s) 1663
NdeII GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
NheI GCTAGC 1 cut(s) 1126
NlaIII CATG 8 cut(s) 220, 779, 872, 1002, 1075, 1136, 1189, 1786
NlaIV GGNNCC 2 cut(s) 576, 629
NsiI ATGCAT 1 cut(s) 1016
NspI RCATGY 1 cut(s) 872
PdmI GAANNNNTTC 4 cut(s) 59, 705, 905, 1293
PfeI GAWTC 6 cut(s) 161, 263, 695, 701, 1170, 1468
PfoI TCCNGGA 1 cut(s) 1639
PinAI ACCGGT 1 cut(s) 1671
PkrI GCNGC 5 cut(s) 139, 992, 1495, 1713, 1801
Psp6I CCWGG 5 cut(s) 859, 886, 1206, 1336, 1639
PspEI GGTNACC 1 cut(s) 1667
PspGI CCWGG 5 cut(s) 859, 886, 1206, 1336, 1639
PspN4I GGNNCC 2 cut(s) 576, 629
PspPI GGNCC 3 cut(s) 503, 1100, 1739
PstI CTGCAG 1 cut(s) 274
PstNI CAGNNNCTG 2 cut(s) 623, 860
PsuI RGATCY 4 cut(s) 178, 620, 856, 982
RsaI GTAC 3 cut(s) 576, 1432, 1534
RsaNI GTAC 3 cut(s) 575, 1431, 1533
RseI CAYNNNNRTG 3 cut(s) 780, 1108, 1604
SaqAI TTAA 2 cut(s) 336, 824
SatI GCNGC 5 cut(s) 138, 991, 1494, 1712, 1800
Sau3AI GATC 7 cut(s) 178, 620, 744, 856, 982, 1518, 1746
Sau96I GGNCC 3 cut(s) 503, 1100, 1739
ScrFI CCNGG 5 cut(s) 861, 888, 1208, 1338, 1641
SexAI ACCWGGT 1 cut(s) 1206
SfaNI GCATC 5 cut(s) 160, 406, 767, 1023, 1264
SfcI CTRYAG 2 cut(s) 270, 710
SinI GGWCC 1 cut(s) 1739
SmiMI CAYNNNNRTG 3 cut(s) 780, 1108, 1604
SmlI CTYRAG 1 cut(s) 953
SmoI CTYRAG 1 cut(s) 953
SpeI ACTAGT 1 cut(s) 581
SsiI CCGC 2 cut(s) 1709, 1737
SspI AATATT 1 cut(s) 1256
SspMI CTAG 7 cut(s) 87, 200, 582, 987, 1127, 1332, 1852
StyD4I CCNGG 5 cut(s) 859, 886, 1206, 1336, 1639
StyI CCWWGG 1 cut(s) 1164
TaaI ACNGT 5 cut(s) 26, 118, 197, 296, 1516
TaqI TCGA 2 cut(s) 12, 1114
TatI WGTACW 1 cut(s) 1430
TfiI GAWTC 6 cut(s) 161, 263, 695, 701, 1170, 1468
Tru1I TTAA 2 cut(s) 336, 824
Tru9I TTAA 2 cut(s) 336, 824
TscAI CASTG 3 cut(s) 301, 1147, 1519
TseI GCWGC 5 cut(s) 137, 990, 1493, 1711, 1799
TspGWI ACGGA 1 cut(s) 269
TspRI CASTG 3 cut(s) 301, 1147, 1519
VpaK11BI GGWCC 1 cut(s) 1739
XapI RAATTY 2 cut(s) 34, 432
XceI RCATGY 1 cut(s) 872
XmnI GAANNNNTTC 4 cut(s) 59, 705, 905, 1293
XspI CTAG 7 cut(s) 87, 200, 582, 987, 1127, 1332, 1852
Zsp2I ATGCAT 1 cut(s) 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.